NCBI Conserved Domain Search

Conserved domains on [gi|1790311778|ref|WP_158514680|]

View

TonB-dependent receptor domain-containing protein [Gemmatimonas phototrophica]

Protein Classification

peptidase associated domain and porin domain-containing protein( domain architecture ID 229645)

peptidase associated domain and porin domain-containing protein contains domains similar to C-terminal domain of M14 N/E carboxypeptidase at the N-terminus and outer membrane beta-barrel protein at the C-terminal end

Graphical summary

Zoom to residue level

show extra options »

Show site features Horizontal zoom: ×

List of domain hits

Name

Accession

Description

Interval

E-value

FepA

COG4771

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...

127-816

7.55e-59

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];

Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 211.64 E-value: 7.55e-59

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 127 VVTTASRSPERIVDAPAAVAVadaIRLADASVTGQ--LPQVLASMPGVFAPQNGINDFN--VGARGFNSfltRRVLVLQD 202
Cdd:COG4771    30 VVVTATRTEQSLSDAPASVSV---ITAEEIEKLGAtdLADALRLLPGVSVTRSGGRGGSsgISIRGLGG---DRVLVLID 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 203 GRDLAIPTLSAQeWSAMSLPLEALGRAEFVRGPGSALYGANAFSGVLNIISPAPRDARGSMLAVGGG--ELGTLRADVQH 280
Cdd:COG4771   104 GVPVNNPALGGG-GDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGsnGNGTYSGSLSL 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 281 ASASDNgrWGWRLNAGYNQSDSWDASRTQPGAlareyaaaidtsrytiaaplpgfevrpligqtksgapglpgvttgTPD 360
Cdd:COG4771   183 GGPGDK--LSFLLSGSYRDRDGYLDYRNGGFV---------------------------------------------GNS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 361 PMSSAYGSARLDYYRENGAVLTAEAGTAEIRNQVFMTGAGRSQIASALRP-------WGRVALDAQG-----YNLMAYYS 428
Cdd:COG4771   216 GYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGdrdtttdRGNYSLRYNGdlgdnLDLSLYYS 295

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 429 G-RRSGDQWSLASGLPQLDDDDI--WHVEGQLNRPFAGtRGSWVAGASLRSVSIDSkgTFLSAADDDRRDSYaALFGQLR 505
Cdd:COG4771   296 RtDRDSTNGSLGGSTGSFSDSDDttYGLELDLTYPLGG-NHTLTLGAEYRYDDLDS--SSFLGGADASRDTY-GLFAQDE 371

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 506 YKLAPTWELLGAARYDGSNLYTA----QWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFleqpagapldlnaleqgl 581
Cdd:COG4771   372 WKLTDKLTLTAGLRYDYYSTFGAsnytAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELY------------------ 433

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 582 rlsplgpalggvpngtlFTNSAAVPVLAIGNRNLAVEKVRSAELGYKG-PLGGKGFVTVDAYYSTLTNFVTnlmaganpl 660
Cdd:COG4771   434 -----------------GSGTGTPGRYVLGNPDLKPETSDNYELGLEYrLGNGGLSLSLTGFYTDIKDLIV--------- 487

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 661 yapwtapsavpeaarsalqsaalgvlgpglTRLPNGGSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLEANAAYFRASV 740
Cdd:COG4771   488 ------------------------------LVPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKI 537

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790311778 741 QRNTfvvGDTLLANTPTHMGNVTLTYRAPGGTDASVTTRLVESYAWR--SGFYNGRVPARQVIDVVAGHQLSPRVRLQ 816
Cdd:COG4771   538 DDGD---TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTppSGRLEGYTPGYTLLDLRASYKLTKNLTLS 612

Peptidase_M14NE-CP-C_like super family

cl21470

Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, ...

41-117

1.61e-06

Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain; This domain is found C-terminal to the M14 carboxypeptidase (CP) N/E subfamily containing zinc-binding enzymes that hydrolyze single C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes enzymatically active members (carboxypeptidase N, E, M, D, and Z), as well as non-active members (carboxypeptidase-like protein 1, -2, aortic CP-like protein, and adipocyte enhancer binding protein-1) which lack the critical active site and substrate-binding residues considered necessary for activity. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. For M14 CPs, it has been suggested that this domain may assist in folding of the CP domain, regulate enzyme activity, or be involved in interactions with other proteins or with membranes; for carboxypeptidase M, it may interact with the bradykinin 1 receptor at the cell surface. This domain may also be found in other peptidase families.

The actual alignment was detected with superfamily member pfam13715:

Pssm-ID: 473874 [Multi-domain] Cd Length: 88 Bit Score: 46.82 E-value: 1.61e-06

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790311778  41 IRGRVIATADSTPLAGIHVRVAGSAVGVLTDRLGQYRL-VIPGGSVPLMFFGMGYQAWQTTVTVPARDSLTVNAALST 117
Cdd:pfam13715   1 ISGTVVDENTGEPLPGATVYVKGTTKGTVTDADGNFELkNLPAGTYTLVVSFVGYKTQEKKVTVSNDNTLDVNFLLKE 78

Name

Accession

Description

Interval

E-value

FepA

COG4771

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...

127-816

7.55e-59

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];

Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 211.64 E-value: 7.55e-59

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 127 VVTTASRSPERIVDAPAAVAVadaIRLADASVTGQ--LPQVLASMPGVFAPQNGINDFN--VGARGFNSfltRRVLVLQD 202
Cdd:COG4771    30 VVVTATRTEQSLSDAPASVSV---ITAEEIEKLGAtdLADALRLLPGVSVTRSGGRGGSsgISIRGLGG---DRVLVLID 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 203 GRDLAIPTLSAQeWSAMSLPLEALGRAEFVRGPGSALYGANAFSGVLNIISPAPRDARGSMLAVGGG--ELGTLRADVQH 280
Cdd:COG4771   104 GVPVNNPALGGG-GDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGsnGNGTYSGSLSL 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 281 ASASDNgrWGWRLNAGYNQSDSWDASRTQPGAlareyaaaidtsrytiaaplpgfevrpligqtksgapglpgvttgTPD 360
Cdd:COG4771   183 GGPGDK--LSFLLSGSYRDRDGYLDYRNGGFV---------------------------------------------GNS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 361 PMSSAYGSARLDYYRENGAVLTAEAGTAEIRNQVFMTGAGRSQIASALRP-------WGRVALDAQG-----YNLMAYYS 428
Cdd:COG4771   216 GYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGdrdtttdRGNYSLRYNGdlgdnLDLSLYYS 295

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 429 G-RRSGDQWSLASGLPQLDDDDI--WHVEGQLNRPFAGtRGSWVAGASLRSVSIDSkgTFLSAADDDRRDSYaALFGQLR 505
Cdd:COG4771   296 RtDRDSTNGSLGGSTGSFSDSDDttYGLELDLTYPLGG-NHTLTLGAEYRYDDLDS--SSFLGGADASRDTY-GLFAQDE 371

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 506 YKLAPTWELLGAARYDGSNLYTA----QWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFleqpagapldlnaleqgl 581
Cdd:COG4771   372 WKLTDKLTLTAGLRYDYYSTFGAsnytAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELY------------------ 433

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 582 rlsplgpalggvpngtlFTNSAAVPVLAIGNRNLAVEKVRSAELGYKG-PLGGKGFVTVDAYYSTLTNFVTnlmaganpl 660
Cdd:COG4771   434 -----------------GSGTGTPGRYVLGNPDLKPETSDNYELGLEYrLGNGGLSLSLTGFYTDIKDLIV--------- 487

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 661 yapwtapsavpeaarsalqsaalgvlgpglTRLPNGGSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLEANAAYFRASV 740
Cdd:COG4771   488 ------------------------------LVPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKI 537

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790311778 741 QRNTfvvGDTLLANTPTHMGNVTLTYRAPGGTDASVTTRLVESYAWR--SGFYNGRVPARQVIDVVAGHQLSPRVRLQ 816
Cdd:COG4771   538 DDGD---TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTppSGRLEGYTPGYTLLDLRASYKLTKNLTLS 612

ligand_gated_channel

cd01347

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...

162-848

2.06e-46

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.

Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 176.49 E-value: 2.06e-46

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 162 LPQVLASMPGVFAPQNGIND-FNVGARGFNSfltRRVLVLQDGRDLAIPTlSAQEWSAMSLPLEALGRAEFVRGPGSALY 240
Cdd:cd01347    18 LADLLRRIPGVSVTRGGGGGgSTISIRGFGP---DRTLVLVDGLPLASSN-YGRGVDLNTIPPELIERVEVLKGPSSALY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 241 GANAFSGVLNIISPAPRDARGSMLAVGGG---ELGTLRADVQHA-SASDNGRWGWRLNAGYNQSDSWDASRTQPGALARE 316
Cdd:cd01347    94 GSGAIGGVVNIITKRPTDEFGGSVTAGYGsdnSGSSGGGGFDVSgALADDGAFGARLYGAYRDGDGTIDGDGQADDSDEE 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 317 YAAAIDTSRYTIAaplPGFEVRPLIGQTKS------GAPGLPGVTTGTPDPMSSAYGSARLDYYRengaVLTAEAGTAEI 390
Cdd:cd01347   174 RYNVAGKLDWRPD---DDTRLTLDAGYQDQdadgpgGTLPANGTGSSLGGGPSSNTNGDRDWDYR----DRYRKRASLGL 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 391 RNQVFMTGAGRSQIASalrpWGRVALDAQGYNLMAYysgRRSGDQWSLASGLPQLDDDDIWHVEGQLNRPFA--GTRGSW 468
Cdd:cd01347   247 EHDLNDTGWTLRANLS----YSYTDNDGDPLILNGG---NNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGtgPVAHTL 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 469 VAGASLRSVSIDSKGTflsaadddrrdsyaALFGQLRYKLAPTWELLGAARYD--------------GSNLYTAQWSPKA 534
Cdd:cd01347   320 TLGVEYRREELDEKQT--------------ALYAQDTIELTDDLTLTLGLRYDhydqdskdtiaggtTAKKSYSHWSPSL 385

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 535 ALVWSPTTSQRVRLTWNQAFQTPNPVErfleqpagapldlnaleqglrlsplgpalggvpngtLFTNSAAVPVLAIGNRN 614
Cdd:cd01347   386 GLVYKLTDGLSLYASYSQGFRAPSLGE------------------------------------LYGGGSHGGTAAVGNPN 429

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 615 LAVEKVRSAELGYKGPLGGKGFVTVDAYYSTLTNFVTnlmaganplyapwTAPSavpeaarsalqsaalgvlgpgltrlp 694
Cdd:cd01347   430 LKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIV-------------STPT-------------------------- 470

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 695 NGGSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLEANAAYFRASVQRNTFVVGDTLLANTPTHMGNVTLTYRAPGGTda 774
Cdd:cd01347   471 NTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDGATTGNRLPGIPKHTANLGLDYELPDEG-- 548

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 775 sVTTRLveSYAWRSGFYNG--------RVPARQVIDVVAGHQLSPRVRLQLVATNLLDQRRYEAFGASVI--------GR 838
Cdd:cd01347   549 -LTAGG--GVRYRGKQYADtangnntvKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSVRGSglygyygpGR 625

                         730
                  ....*....|
gi 1790311778 839 RVLGRATYTW 848
Cdd:cd01347   626 TYYLSVSYKF 635

TonB_dep_Rec

pfam00593

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

463-847

1.75e-26

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 114.10 E-value: 1.75e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 463 GTRGSWVAGASLRSVSIDSKGTFLSAADDDRRDSYAaLFGQLRYKLAPTWELLGAARYDGSNLYTA-------------- 528
Cdd:pfam00593 141 TAGLDYRRLDDDAYDPYDPANPSSSSYSDTTTDSYG-LYLQDNIKLTDRLTLTLGLRYDHYSTDGDdgngggdnfsrsys 219

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 529 QWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFLEQPAGAPldlnaleqglrlsplgpalggvpngtlftnsaavPVL 608
Cdd:pfam00593 220 AFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGG----------------------------------GAV 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 609 AIGNRNLAVEKVRSAELGYKGpLGGKGFVTVDAYYSTLTNFVTNlmaganplyapwtapsavpeaarsalqsaalgvlgp 688
Cdd:pfam00593 266 AGGNPDLKPETSDNYELGLKY-DDGRLSLSLALFYIDIKNLITS------------------------------------ 308

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 689 glTRLPNGGSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLEANAAYFRASVQRNTFVVGDTlLANTPTHMGNVTLTYRA 768
Cdd:pfam00593 309 --DPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADDTGNP-LPNVPRHTANLGLTYDF 385

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 769 PGGT-DASVTTRLVESYAWRSGFYNG--RVPARQVIDVVAGHQLSPRVRLQLVATNLLDQ--RRYEAFGASVI------G 837
Cdd:pfam00593 386 PLGGwGARLGARYVGSGERRYGDAANtfKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKyyKRYYSSGGGNLggypgpG 465

                         410
                  ....*....|
gi 1790311778 838 RRVLGRATYT 847
Cdd:pfam00593 466 RTFYLGLSYK 475

TonB-siderophor

TIGR01783

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...

164-830

8.45e-16

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]

Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 81.69 E-value: 8.45e-16

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 164 QVLASMPGV-FAPQNGINDF-NVGARGFNSfLTRRVLVLQDGrdlaIPTLSAQEWSamSLPLEALGRAEFVRGPGSALYG 241
Cdd:TIGR01783  24 EALQRVPGVvVGGSGGTTQFgNITIRGFGL-EVDIDNVYLDG----VPLLSRGNLA--IVDPAMVERVEVLRGPASLLYG 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 242 ANAFSGVLNIISPAPRDARGSMLAVGGGELGTLRADVQH-ASASDNGRWGWRLNAGYNQSDSW-DASRTQPGALAREYAA 319
Cdd:TIGR01783  97 GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLgGPLGADGTFRGRLNGARQDGDSFyDGAGEETRLGATATDW 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 320 AIDTSryTIAAPLPGFEVrpliGQTKSGAPGLPGVTTGTPDPMSS----AYGSARLDYYRENgavLTAEAGTAEIRNQVF 395
Cdd:TIGR01783 177 QLDDR--TLLRLGAYYQK----ERDRGGYGGLPASGGTSGRDLSSdrylGTSSNRNYDDREY---LSYGLSLEYQFNDVW 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 396 mTG---AGRSQIASALRPWGRVAL-DAQGYNLMAYYSGRRSGDQWSLASGLPQ-LDDDDIWHVEGQLNRPFAGTRGSWVA 470
Cdd:TIGR01783 248 -TGkqnLRYSYFDTDSNQVQASGYsSDGGLFGRSLTVVNVKQDRVQIDAGLDGeFETGPIEHDLLLGVSYGQRTTNRFNN 326

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 471 GASLrSVSIDSKGTFLSAADDD---------RRDSYA-ALFGQLRYKLAPTWELLGAARYDGSNLYT------------- 527
Cdd:TIGR01783 327 TGYP-SDNIYSLTATSSARTDIgdspkdralSSTTKAlNGVALQRILLADKWTLTLGGRYDSVDVKSnngvagstgkrdd 405

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 528 AQWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFleqpagapldlnaleQGLRLSPLGPalggvpngtlftnsaavpv 607
Cdd:TIGR01783 406 SQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKG---------------AGNSGDILEP------------------- 451

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 608 laignrnlavEKVRSAELGYKGPLGGKGFVTVDAYYSTLTNfvtNLMAGanplyapwtapsavpeaarsalqsaalgvlg 687
Cdd:TIGR01783 452 ----------EKGKNYELGVRYDLGDSLLATAALFRITKDN---QLVQD------------------------------- 487

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 688 pgltrlPNGGSAYVlslgNAGRATEWGGELSVGYPLSSRLTLEANAAYFRAsvQRNTFVVGDT---LLANTPTHMGNVTL 764
Cdd:TIGR01783 488 ------PVNGTFSV----NAGKTRNRGVELEARGYLTPGLSLSAGYTYTDA--EFTEDTNGDTqgnTVPFVPKHTASLWA 555

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 765 TYRAPGGTDA-SVTTRLVESY-AWRSGFYNGRVPARQVIDVVAGHQL--SPRVRLQLVATNLLDQRRYEA 830
Cdd:TIGR01783 556 SYAPPVGDNGlTLGGGVQYTGkAYVDGGNTGKVPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYTS 625

PRK10064

catecholate siderophore receptor CirA; Provisional

162-839

6.81e-14

catecholate siderophore receptor CirA; Provisional

Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 75.69 E-value: 6.81e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 162 LPQVLASMPGVFAPQNGINDFNVGARGFNSFLTrrvLVLQDGR--DLAIPTLSAQEWSAMSLPLEALGRAEFVRGPGSAL 239
Cdd:PRK10064   67 LKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYT---LILIDGKrvNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSL 143

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 240 YGANAFSGVLNIISPaprdargsmlAVGGGELGTLRAD--VQHASASDNGRWGWRLNAGYNQSDSWDASRTqpGALAREY 317
Cdd:PRK10064  144 YGSDALGGVVNIITK----------KIGQKWHGTVTVDttIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAY--GSLAKRE 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 318 AAAIDTSRYTIAAPLPGFEvrpliGQTKSGAPGLPGVTTGTPDPMSSAYGSARLDYYRENGAVLTAEagtaeiRNQVFMT 397
Cdd:PRK10064  212 KDDPQNSTTTDTGETPRIE-----GFTSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLE------RQNYSLS 280

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 398 GAGRSQiasalrpWGRVALDAQGYNLMAYYSGRRSGDQWSLASglpqlddddiwhVEGQLNRPFAGTRGSWVAGASLRSV 477
Cdd:PRK10064  281 HNGRWD-------YGNSELKYYGEKVENKNPGNSSPITSESNS------------IDGKYTLPLTAINQFLTFGGEWRHD 341

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 478 SIDSKGTFLSAADDDRRDSYAALFGQLRYKLAPTWELLGAARYDGSNLYTAQWSPKAALVWSPTTSQRVRLTWNQAFQTP 557
Cdd:PRK10064  342 KLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAP 421

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 558 NPverfleqpagapldlnaleqgLRLSPlgpalggvpngTLFTNSAAVPVLAIGNRNLAVEKVRSAELG--YKGPLGgkG 635
Cdd:PRK10064  422 SL---------------------LQLSP-----------DWTSNSCRGACKIVGSPDLKPETSESWELGlyYMGEEG--W 467

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 636 FVTVDAYYSTLTNFVTNLMA---GANPLYAPwTAPSAVpeaarsalqsaalgvlgpGLTRLPNGGSAYVLSLGNAGRATE 712
Cdd:PRK10064  468 LEGVESSVTVFRNDVDDRISisrTSDVNAAP-GYQNFV------------------GFETNGRGRRVPVFRYYNVNKARI 528

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 713 WGGELSVGYPLSSRLTLEANAAYFRAsvqRNTFVVGDTLLANTPTHMGNVTLTYRAPGGTDASVTTRLVESYAWRSGFYN 792
Cdd:PRK10064  529 QGVETELKIPFNDEWKLSLNYTYNDG---RDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGNYTGQKRADSAT 605

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....*....
gi 1790311778 793 GRVPARQVI-DVVAGHQLSPRVRLQLVATNLLD-QRRYEAFGASVIGRR 839
Cdd:PRK10064  606 AKTPGGYTIwNTGAAWQVTKDVKLRAGVLNLGDkDLSRDDYSYNEDGRR 654

CarbopepD_reg_2

pfam13715

CarboxypepD_reg-like domain; This domain family is found in bacteria, archaea and eukaryotes, ...

41-117

1.61e-06

CarboxypepD_reg-like domain; This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.

Pssm-ID: 433425 [Multi-domain] Cd Length: 88 Bit Score: 46.82 E-value: 1.61e-06

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790311778  41 IRGRVIATADSTPLAGIHVRVAGSAVGVLTDRLGQYRL-VIPGGSVPLMFFGMGYQAWQTTVTVPARDSLTVNAALST 117
Cdd:pfam13715   1 ISGTVVDENTGEPLPGATVYVKGTTKGTVTDADGNFELkNLPAGTYTLVVSFVGYKTQEKKVTVSNDNTLDVNFLLKE 78

Name

Accession

Description

Interval

E-value

FepA

COG4771

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...

127-816

7.55e-59

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];

Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 211.64 E-value: 7.55e-59

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 127 VVTTASRSPERIVDAPAAVAVadaIRLADASVTGQ--LPQVLASMPGVFAPQNGINDFN--VGARGFNSfltRRVLVLQD 202
Cdd:COG4771    30 VVVTATRTEQSLSDAPASVSV---ITAEEIEKLGAtdLADALRLLPGVSVTRSGGRGGSsgISIRGLGG---DRVLVLID 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 203 GRDLAIPTLSAQeWSAMSLPLEALGRAEFVRGPGSALYGANAFSGVLNIISPAPRDARGSMLAVGGG--ELGTLRADVQH 280
Cdd:COG4771   104 GVPVNNPALGGG-GDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGsnGNGTYSGSLSL 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 281 ASASDNgrWGWRLNAGYNQSDSWDASRTQPGAlareyaaaidtsrytiaaplpgfevrpligqtksgapglpgvttgTPD 360
Cdd:COG4771   183 GGPGDK--LSFLLSGSYRDRDGYLDYRNGGFV---------------------------------------------GNS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 361 PMSSAYGSARLDYYRENGAVLTAEAGTAEIRNQVFMTGAGRSQIASALRP-------WGRVALDAQG-----YNLMAYYS 428
Cdd:COG4771   216 GYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGdrdtttdRGNYSLRYNGdlgdnLDLSLYYS 295

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 429 G-RRSGDQWSLASGLPQLDDDDI--WHVEGQLNRPFAGtRGSWVAGASLRSVSIDSkgTFLSAADDDRRDSYaALFGQLR 505
Cdd:COG4771   296 RtDRDSTNGSLGGSTGSFSDSDDttYGLELDLTYPLGG-NHTLTLGAEYRYDDLDS--SSFLGGADASRDTY-GLFAQDE 371

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 506 YKLAPTWELLGAARYDGSNLYTA----QWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFleqpagapldlnaleqgl 581
Cdd:COG4771   372 WKLTDKLTLTAGLRYDYYSTFGAsnytAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELY------------------ 433

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 582 rlsplgpalggvpngtlFTNSAAVPVLAIGNRNLAVEKVRSAELGYKG-PLGGKGFVTVDAYYSTLTNFVTnlmaganpl 660
Cdd:COG4771   434 -----------------GSGTGTPGRYVLGNPDLKPETSDNYELGLEYrLGNGGLSLSLTGFYTDIKDLIV--------- 487

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 661 yapwtapsavpeaarsalqsaalgvlgpglTRLPNGGSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLEANAAYFRASV 740
Cdd:COG4771   488 ------------------------------LVPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKI 537

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790311778 741 QRNTfvvGDTLLANTPTHMGNVTLTYRAPGGTDASVTTRLVESYAWR--SGFYNGRVPARQVIDVVAGHQLSPRVRLQ 816
Cdd:COG4771   538 DDGD---TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTppSGRLEGYTPGYTLLDLRASYKLTKNLTLS 612

CirA

COG1629

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

127-830

3.27e-55

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 201.98 E-value: 3.27e-55

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 127 VVTTASRSPERIVDAPAAVAVADAIRLADASVTgQLPQVLASMPGVFAPQNGINDFNVGARGFNSFlTRRVLVLQDGRDL 206
Cdd:COG1629     4 VVVTATRTDESLQDVPGSVSVISREQLEDQPAT-DLGDLLRRVPGVSVTSAGGGAGQISIRGFGGG-GNRVLVLVDGVPL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 207 AIPTLSAQEWSamSLPLEALGRAEFVRGPGSALYGANAFSGVLNIISPAPRDARGSMLAVGGGELGTLRADVQHASASDN 286
Cdd:COG1629    82 NDPSGGDGGLS--YIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLSGGNGK 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 287 grWGWRLNAGYNQSDSWdasrtqpgalaREYAaaiDTSRYTIAA-----PLPGFEVRPLIGQTKSGAPGLPGVTTGTPDP 361
Cdd:COG1629   160 --LAYRLSASYRDSDGY-----------RDNS---DSDRYNLRAklgyqLGDDTRLTLSASYSDSDQDSPGYLTLAALRP 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 362 MSSAYGSARLDYYrengavltaeaGTAEIRNQVFMTGAGRSQIASALRpwgrvaLDAQ-GYNLMAYYSGRRSGDQWSLAS 440
Cdd:COG1629   224 RGAMDDGTNPYSN-----------DTDDNTRDRYSLSLEYEHLGDGLK------LSASaYYRYDDTDLDSDFTPTPADGG 286

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 441 GLPQLDDD-DIWHVEGQLN-RPFAGTRGSWVAGASLRSVSIDSKGTFLSAADDDRRDSY-----------AALFGQLRYK 507
Cdd:COG1629   287 TLEQTDFDnRTYGLELRLTyDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTsgadddgtttsLALYAQDTYK 366

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 508 LAPTWELLGAARYDGSNLYTA----------------QWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFleqpagap 571
Cdd:COG1629   367 LTDKLTLTAGLRYDYVSYDVDdtvtgtdsasgsrsysAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELY-------- 438

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 572 ldlnaleqglrlsplgpalggvpngtlftnSAAVPVLAIGNRNLAVEKVRSAELGYKG-PLGGKGFVTVDAYYSTLTNFV 650
Cdd:COG1629   439 ------------------------------ANGTDPYSVGNPDLKPETSTNYELGLRYrLLDGRLSLSLALFYSDVDNEI 488

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 651 TNLMAGANplyapwtapsavpeaarsalqsaalgvlgpgltrlpnggSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLE 730
Cdd:COG1629   489 LSVPLPND---------------------------------------SGFSTYYTNAGKARSYGVELELSYQLTPGLSLN 529

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 731 ANAAYFRASVQRNT---FVVGDTLLANTPTHMGNVTLTYRAPGGTDASVTTRLVESYAWRSGFYNGRVPARQVIDVVAGH 807
Cdd:COG1629   530 ASYSYTDAKFDDDTdgsADLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGAPGGYTLVDLGAGY 609

                         730       740
                  ....*....|....*....|...
gi 1790311778 808 QLSPRVRLQLVATNLLDQRRYEA 830
Cdd:COG1629   610 RFGDNLTLSLGVDNLFDKKYATS 632

ligand_gated_channel

cd01347

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...

162-848

2.06e-46

Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 176.49 E-value: 2.06e-46

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 162 LPQVLASMPGVFAPQNGIND-FNVGARGFNSfltRRVLVLQDGRDLAIPTlSAQEWSAMSLPLEALGRAEFVRGPGSALY 240
Cdd:cd01347    18 LADLLRRIPGVSVTRGGGGGgSTISIRGFGP---DRTLVLVDGLPLASSN-YGRGVDLNTIPPELIERVEVLKGPSSALY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 241 GANAFSGVLNIISPAPRDARGSMLAVGGG---ELGTLRADVQHA-SASDNGRWGWRLNAGYNQSDSWDASRTQPGALARE 316
Cdd:cd01347    94 GSGAIGGVVNIITKRPTDEFGGSVTAGYGsdnSGSSGGGGFDVSgALADDGAFGARLYGAYRDGDGTIDGDGQADDSDEE 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 317 YAAAIDTSRYTIAaplPGFEVRPLIGQTKS------GAPGLPGVTTGTPDPMSSAYGSARLDYYRengaVLTAEAGTAEI 390
Cdd:cd01347   174 RYNVAGKLDWRPD---DDTRLTLDAGYQDQdadgpgGTLPANGTGSSLGGGPSSNTNGDRDWDYR----DRYRKRASLGL 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 391 RNQVFMTGAGRSQIASalrpWGRVALDAQGYNLMAYysgRRSGDQWSLASGLPQLDDDDIWHVEGQLNRPFA--GTRGSW 468
Cdd:cd01347   247 EHDLNDTGWTLRANLS----YSYTDNDGDPLILNGG---NNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGtgPVAHTL 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 469 VAGASLRSVSIDSKGTflsaadddrrdsyaALFGQLRYKLAPTWELLGAARYD--------------GSNLYTAQWSPKA 534
Cdd:cd01347   320 TLGVEYRREELDEKQT--------------ALYAQDTIELTDDLTLTLGLRYDhydqdskdtiaggtTAKKSYSHWSPSL 385

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 535 ALVWSPTTSQRVRLTWNQAFQTPNPVErfleqpagapldlnaleqglrlsplgpalggvpngtLFTNSAAVPVLAIGNRN 614
Cdd:cd01347   386 GLVYKLTDGLSLYASYSQGFRAPSLGE------------------------------------LYGGGSHGGTAAVGNPN 429

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 615 LAVEKVRSAELGYKGPLGGKGFVTVDAYYSTLTNFVTnlmaganplyapwTAPSavpeaarsalqsaalgvlgpgltrlp 694
Cdd:cd01347   430 LKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIV-------------STPT-------------------------- 470

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 695 NGGSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLEANAAYFRASVQRNTFVVGDTLLANTPTHMGNVTLTYRAPGGTda 774
Cdd:cd01347   471 NTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDGATTGNRLPGIPKHTANLGLDYELPDEG-- 548

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 775 sVTTRLveSYAWRSGFYNG--------RVPARQVIDVVAGHQLSPRVRLQLVATNLLDQRRYEAFGASVI--------GR 838
Cdd:cd01347   549 -LTAGG--GVRYRGKQYADtangnntvKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSVRGSglygyygpGR 625

                         730
                  ....*....|
gi 1790311778 839 RVLGRATYTW 848
Cdd:cd01347   626 TYYLSVSYKF 635

Fiu

COG4774

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];

164-848

2.95e-33

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];

Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 136.55 E-value: 2.95e-33

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 164 QVLASMPGVFAPQNGINDF-NVGARGFNSfltrRVLVLQDG-RDLAiptlsaqewsAMSLPLEALGRAEFVRGPGSALYG 241
Cdd:COG4774    31 DALRNVPGVTFGAGEGGNGdSFSIRGFSA----SGDIYVDGlRDPG----------QYRRDTFNLERVEVLKGPASVLYG 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 242 ANAFSGVLNIISPAPRDARGSMLAVGGGELGTLRA--DVqhasasdNGR----WGWRLNAGYNQSDSWdasrtqpgalaR 315
Cdd:COG4774    97 RGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRAtlDV-------NGPlgddLAYRLNGMYRDSDSY-----------R 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 316 EYaaaIDTSRYTIAaplPGFEVRP---------LIGQTKSGAP--GLPGVTTGTPDPM--SSAYGSARlDYYRENGAVLT 382
Cdd:COG4774   159 DG---VDNDRWGIA---PSLTWRLgdrtrltldYEYQDDDRTPdyGVPAVANGRPVDVdrSTFYGQPD-DYSDSETDSAT 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 383 AEAgTAEIRNQVFMTGAGRsqiasalrpWGRVALDaqgyNLMAYYSGRRSGDQWSLaSGLPQLDDDDIWHVEGQLNRPF- 461
Cdd:COG4774   232 LRL-EHDFNDNWTLRNALR---------YSDYDRD----YRNTYPTGGNATGTVTR-SAYRRDQDNDTLSNQTDLTGKFd 296

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 462 -AGTRGSWVAGASLRSVSIDSKGTFLSA-----------------------ADDDRRDSYAALFGQLRYKLAPTWELLGA 517
Cdd:COG4774   297 tGGVKHTLLAGVEYSREDSDNARYSGGGtaptvnlynpvygapvtgptlggADNDSRTDTTGLYLQDTISLTDRWSLLAG 376

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 518 ARYD-----GSNLYTAQ---------WSPKAALVWSPTTSQRVRLTWNQAFQtpnpverfleqpagapldlnaleqglrl 583
Cdd:COG4774   377 LRYDrfdtdYTDRTTGAttssyddsaFSPRAGLVYKPTPNLSLYASYSTSFN---------------------------- 428

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 584 splgpalggvPNGTLFTNSAAvpvlaigNRNLAVEKVRSAELGYKG-PLGGKGFVTVDAYYSTLTNfvtnlmaganplya 662
Cdd:COG4774   429 ----------PGGGAPSLSNA-------GQALDPEKSRQYEVGVKWdLLDGRLSLTAALFRIEKTN-------------- 477

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 663 pwtapsavpeaarsalqsaalgvlgpGLTRLPNGGSAYVLslgnAGRATEWGGELSVGYPLSSRLTLEANAAYFRASVQR 742
Cdd:COG4774   478 --------------------------VRTTDPANPGVYVQ----TGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITK 527

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 743 NTFV--VGDTlLANTPTHMGNVTLTYRAPGGtDASVTTRLVesyaWRSGFYNG-----RVPARQVIDVVAGHQLSPRVRL 815
Cdd:COG4774   528 SANAanVGNR-LPNVPRHSASLWTTYDLPLP-GLTLGGGVR----YVGSRYADaantvKLPSYTRFDAGASYRLNKNLTL 601

                         730       740       750
                  ....*....|....*....|....*....|....*...
gi 1790311778 816 QLVATNLLDQRRYE-AFGASVI----GRRVLGRATYTW 848
Cdd:COG4774   602 RLNVNNLTDKRYYAsAYGSGYVtpgaPRTVLLSASYRF 639

FhuE

COG4773

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...

152-848

2.46e-31

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];

Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 131.17 E-value: 2.46e-31

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 152 RLADASVTgQLPQVLASMPGVFAPQNGINDF-NVGARGFNSFLTRRvlvlqDGrdlaiptLSAQEWSAMSLPLEALGRAE 230
Cdd:COG4773    76 LIEDQGAT-TLDDALRNVPGVTVSSYDGGGRdSFSIRGFSIDNYLR-----DG-------LPLGGFGGGQPDTANLERVE 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 231 FVRGPGSALYGANAFSGVLNIISPAPRDARGSMLAVGGGELGTLR--ADVQhASASDNGRWGWRLNAGYNQSDSWdasrt 308
Cdd:COG4773   143 VLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRatADVG-GPLNEDGTLRYRLNAAYEDGDSF----- 216

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 309 qpgalaREYAaaiDTSRYTIAaplPGFEVRP------LIG------QTKSGAPGLPGVTTGTPDPMSSAYGsARLDYYRE 376
Cdd:COG4773   217 ------RDGV---DNRRTLIA---PSLDWDLtddttlTLGaeyqddDSTGDRGFLPLDGTLLDLPRSTNLG-EPWDYYDT 283

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 377 NGAVLTAEAgTAEIRNQVFMTGAGRSQIASA----LRPWGRVALDAQGYNLMAYYSGRrsgdqwslasglpqldDDDIWH 452
Cdd:COG4773   284 ETTTLFAEL-EHRFNDDWSLRANARYSDSDRdgrsAYAYGAPDAATGTLTRYASARDG----------------DSRSDS 346

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 453 VEGQLNRPF--AGTRGSWVAGASLRSVSIDSKGTF------------------LSAADDDRRDSYAALFGQLRYKLAPTW 512
Cdd:COG4773   347 LDANLNGKFetGGLEHTLLVGADYSRYDSDSDSATagtiniynpvygnlpepdFDASDTDTTTRQTGLYAQDQISLTDRL 426

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 513 ELLGAARYD-------------GSNLYTAQWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERfleqpAGAPLDlnaleq 579
Cdd:COG4773   427 SLLLGGRYDwyetdstnrlggsTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADN-----NGNPLD------ 495

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 580 glrlsplgPALGgvpngtlftnsaavpvlaignrnlavekvRSAELGYKG-PLGGKGFVTVDAYYSTLTNFvtnlmagan 658
Cdd:COG4773   496 --------PETG-----------------------------KQYEAGVKGeLFDGRLNATLAVFDITQKNV--------- 529

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 659 plyapwtapsavpeaarsalqsaalgvlgpgLTRLPNGGSAYVlslgNAGRATEWGGELSVGYPLSSRLTLEANAAYFRA 738
Cdd:COG4773   530 -------------------------------ATTDPDNPNFYV----QVGEVRSRGVELELSGELTPGLNLIAGYTYTDA 574

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 739 SVQR-NTFVVGDTlLANTPTHMGNVTLTYRAPGGTDA--SVTTRLVesyaWRSGFYNG-----RVPARQVIDVVAGHQLS 810
Cdd:COG4773   575 KITKdADALEGKR-LTNVPRHTASLWTTYRFPSGALKglGLGGGVR----YVGERYGDaantfTLPSYTLVDAGARYDLG 649

                         730       740       750       760
                  ....*....|....*....|....*....|....*....|...
gi 1790311778 811 PRVRLQLVATNLLDQRRYEAFGASVI-----GRRVLGRATYTW 848
Cdd:COG4773   650 KNWTLQLNVNNLFDKKYYASSGSRGYvyygaPRNVRLSLSYKF 692

FecA

COG4772

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];

164-826

5.83e-31

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];

Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 130.05 E-value: 5.83e-31

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 164 QVLASMPGVFAPQN---GInDFNVGARGFNSFLTRRVLVLQDGRDLAIPTLSAQEwSAMSLPLEALGRAEFVRGPGSALY 240
Cdd:COG4772    63 EVLRRVPGVNVQEEdgfGL-RPNIGIRGLGPRRSRGITLLEDGIPIAPAPYGDPA-AYYFPDLERMERIEVLRGAAALRY 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 241 GANAFSGVLNIISPAPRDARGSMLAVGGGELGTLRAdvqHASASD-NGRWGWRLNAGYNQSDSWdasrtqpgalaREYAa 319
Cdd:COG4772   141 GPQTVGGAINFVTRTIPTAFGGELRVTGGSFGYRRT---HASVGGtVGNFGYLVEYSRKRGDGF-----------RDNS- 205

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 320 aiDTSRYTIAAplpgfevrpligqtKSGAPGLPGVTTgtpdpmssaygSARLDYYREN----GAvLTaeagTAEIRNQVF 395
Cdd:COG4772   206 --GFDINDFNA--------------KLGYRLSDRQEL-----------TLKFQYYDEDantpGG-LT----DAQFDADPR 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 396 MTGAGRSQIASalrPWGRVAL-------DAQGYNLMAYYSGRRSGDQWSLASGLPQLDDDDIWH---------VEGQLNR 459
Cdd:COG4772   254 QSYRPADQFDT---RRTQLSLryehqlsDNTTLTTTAYYNDFSRNWYIRQNTADPNTPGLGLRGnprgyrsygIEPRLTH 330

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 460 PF--AGTRGSWVAGASLRSVSIDSKGT----------FLSAADDDRRDSYAALFGQLRYKLAPTWELLGAARY------- 520
Cdd:COG4772   331 RFelGGVPHTLEVGLRYHREEEDRKQYvntygqgrsgAGLRRDRRFSADALAAYAQNRFELTGRLTLTPGLRYehirrdr 410

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 521 ------------DGSNLYTaQWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVErfLEQPAGAPLDLNAleqglrlsplgp 588
Cdd:COG4772   411 tdrystrtggddSGSNSYS-EFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGD--LAYGNGGNPDLKP------------ 475

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 589 alggvpngtlftnsaavpvlaignrnlavEKVRSAELGYKGPLGGKGFVTVDAYYSTLTNFVTNlmaganplyapwtaps 668
Cdd:COG4772   476 -----------------------------EKSWNYELGTRGRIGNGLSAEVALFYIDYDNELGS---------------- 510

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 669 avpeaarsalQSAALGVLGpgltrlpnggsayvlSLGNAGRATEWGGELSVGYPLSS----RLTLEANAAYFRASVQRNT 744
Cdd:COG4772   511 ----------CSAAGGDRS---------------TFTNAGETRHQGLELALDYDLLKggglGLPLFAAYTYTDAEFTSDF 565

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 745 -FVVGDTLLANTPTHMGNVTLTYRaPGGTDASVttrlveSYAWRSGFY-----------NGRVPARQVIDVVAGHQLSPR 812
Cdd:COG4772   566 gPVFAGNRLPYVPRHQLTAGLGYE-HGGWTANL------NGRYVSEQFtdaantvadgsFGKIPSYTVLDLSASYDFGKN 638

                         730
                  ....*....|....
gi 1790311778 813 VRLQLVATNLLDQR 826
Cdd:COG4772   639 LSLFAGVNNLFDKR 652

TonB_dep_Rec

pfam00593

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

463-847

1.75e-26

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 114.10 E-value: 1.75e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 463 GTRGSWVAGASLRSVSIDSKGTFLSAADDDRRDSYAaLFGQLRYKLAPTWELLGAARYDGSNLYTA-------------- 528
Cdd:pfam00593 141 TAGLDYRRLDDDAYDPYDPANPSSSSYSDTTTDSYG-LYLQDNIKLTDRLTLTLGLRYDHYSTDGDdgngggdnfsrsys 219

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 529 QWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFLEQPAGAPldlnaleqglrlsplgpalggvpngtlftnsaavPVL 608
Cdd:pfam00593 220 AFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGG----------------------------------GAV 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 609 AIGNRNLAVEKVRSAELGYKGpLGGKGFVTVDAYYSTLTNFVTNlmaganplyapwtapsavpeaarsalqsaalgvlgp 688
Cdd:pfam00593 266 AGGNPDLKPETSDNYELGLKY-DDGRLSLSLALFYIDIKNLITS------------------------------------ 308

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 689 glTRLPNGGSAYVLSLGNAGRATEWGGELSVGYPLSSRLTLEANAAYFRASVQRNTFVVGDTlLANTPTHMGNVTLTYRA 768
Cdd:pfam00593 309 --DPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADDTGNP-LPNVPRHTANLGLTYDF 385

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 769 PGGT-DASVTTRLVESYAWRSGFYNG--RVPARQVIDVVAGHQLSPRVRLQLVATNLLDQ--RRYEAFGASVI------G 837
Cdd:pfam00593 386 PLGGwGARLGARYVGSGERRYGDAANtfKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKyyKRYYSSGGGNLggypgpG 465

                         410
                  ....*....|
gi 1790311778 838 RRVLGRATYT 847
Cdd:pfam00593 466 RTFYLGLSYK 475

BtuB

COG4206

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];

127-305

2.86e-21

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];

Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 94.55 E-value: 2.86e-21

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 127 VVTTASRSPERIVDAPAAVAVADAIRLADASVTgQLPQVLASMPGVFAPQNGI--NDFNVGARGFNSfltRRVLVLQDGR 204
Cdd:COG4206     1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGAT-SLADALRRVPGVQVSSSGGpgSAASISIRGLGS---NQTLVLIDGV 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 205 DLAIPTLSAQEWSamSLPLEALGRAEFVRGPGSALYGANAFSGVLNIISPAPRDARGSMLAVGGGELGTLRADVQHasAS 284
Cdd:COG4206    77 PLNDPSLGGVDLS--LIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASL--SG 152

                         170       180
                  ....*....|....*....|.
gi 1790311778 285 DNGRWGWRLNAGYNQSDSWDA 305
Cdd:COG4206   153 GAGKFSYSLSASYRRSDGYRY 173

TonB-siderophor

TIGR01783

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...

164-830

8.45e-16

Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 81.69 E-value: 8.45e-16

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 164 QVLASMPGV-FAPQNGINDF-NVGARGFNSfLTRRVLVLQDGrdlaIPTLSAQEWSamSLPLEALGRAEFVRGPGSALYG 241
Cdd:TIGR01783  24 EALQRVPGVvVGGSGGTTQFgNITIRGFGL-EVDIDNVYLDG----VPLLSRGNLA--IVDPAMVERVEVLRGPASLLYG 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 242 ANAFSGVLNIISPAPRDARGSMLAVGGGELGTLRADVQH-ASASDNGRWGWRLNAGYNQSDSW-DASRTQPGALAREYAA 319
Cdd:TIGR01783  97 GSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLgGPLGADGTFRGRLNGARQDGDSFyDGAGEETRLGATATDW 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 320 AIDTSryTIAAPLPGFEVrpliGQTKSGAPGLPGVTTGTPDPMSS----AYGSARLDYYRENgavLTAEAGTAEIRNQVF 395
Cdd:TIGR01783 177 QLDDR--TLLRLGAYYQK----ERDRGGYGGLPASGGTSGRDLSSdrylGTSSNRNYDDREY---LSYGLSLEYQFNDVW 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 396 mTG---AGRSQIASALRPWGRVAL-DAQGYNLMAYYSGRRSGDQWSLASGLPQ-LDDDDIWHVEGQLNRPFAGTRGSWVA 470
Cdd:TIGR01783 248 -TGkqnLRYSYFDTDSNQVQASGYsSDGGLFGRSLTVVNVKQDRVQIDAGLDGeFETGPIEHDLLLGVSYGQRTTNRFNN 326

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 471 GASLrSVSIDSKGTFLSAADDD---------RRDSYA-ALFGQLRYKLAPTWELLGAARYDGSNLYT------------- 527
Cdd:TIGR01783 327 TGYP-SDNIYSLTATSSARTDIgdspkdralSSTTKAlNGVALQRILLADKWTLTLGGRYDSVDVKSnngvagstgkrdd 405

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 528 AQWSPKAALVWSPTTSQRVRLTWNQAFQTPNPVERFleqpagapldlnaleQGLRLSPLGPalggvpngtlftnsaavpv 607
Cdd:TIGR01783 406 SQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKG---------------AGNSGDILEP------------------- 451

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 608 laignrnlavEKVRSAELGYKGPLGGKGFVTVDAYYSTLTNfvtNLMAGanplyapwtapsavpeaarsalqsaalgvlg 687
Cdd:TIGR01783 452 ----------EKGKNYELGVRYDLGDSLLATAALFRITKDN---QLVQD------------------------------- 487

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 688 pgltrlPNGGSAYVlslgNAGRATEWGGELSVGYPLSSRLTLEANAAYFRAsvQRNTFVVGDT---LLANTPTHMGNVTL 764
Cdd:TIGR01783 488 ------PVNGTFSV----NAGKTRNRGVELEARGYLTPGLSLSAGYTYTDA--EFTEDTNGDTqgnTVPFVPKHTASLWA 555

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 765 TYRAPGGTDA-SVTTRLVESY-AWRSGFYNGRVPARQVIDVVAGHQL--SPRVRLQLVATNLLDQRRYEA 830
Cdd:TIGR01783 556 SYAPPVGDNGlTLGGGVQYTGkAYVDGGNTGKVPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYTS 625

TonB-B12

TIGR01779

TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ...

162-312

3.00e-15

TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]

Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 79.91 E-value: 3.00e-15

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 162 LPQVLASMPGVFAPQNGindfnvgARGFNSFLTRR------VLVLQDGRDLAIPTLSAQEWSamSLPLEALGRAEFVRGP 235
Cdd:TIGR01779  65 LPELLRRLPGVSIAQNG-------GRGQNTSLFLRgtesdhVLVLIDGIRFGSAAAGAADFQ--QLPVELVERIEYVRGP 135

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1790311778 236 GSALYGANAFSGVLNIISPAPRDARGSMLAVGGGELGTLRADVQHASASDNGRWgWRLNAGYNQSDSWDASRTQPGA 312
Cdd:TIGR01779 136 RSSLYGSEAIGGVINIITRRRSGGQGTTLSAGLGSLDYQEYSIASGVAIGENGW-YSVALGTESTKGINVRPGGPGV 211

PRK10064

catecholate siderophore receptor CirA; Provisional

162-839

6.81e-14

catecholate siderophore receptor CirA; Provisional

Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 75.69 E-value: 6.81e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 162 LPQVLASMPGVFAPQNGINDFNVGARGFNSFLTrrvLVLQDGR--DLAIPTLSAQEWSAMSLPLEALGRAEFVRGPGSAL 239
Cdd:PRK10064   67 LKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYT---LILIDGKrvNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSL 143

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 240 YGANAFSGVLNIISPaprdargsmlAVGGGELGTLRAD--VQHASASDNGRWGWRLNAGYNQSDSWDASRTqpGALAREY 317
Cdd:PRK10064  144 YGSDALGGVVNIITK----------KIGQKWHGTVTVDttIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAY--GSLAKRE 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 318 AAAIDTSRYTIAAPLPGFEvrpliGQTKSGAPGLPGVTTGTPDPMSSAYGSARLDYYRENGAVLTAEagtaeiRNQVFMT 397
Cdd:PRK10064  212 KDDPQNSTTTDTGETPRIE-----GFTSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLE------RQNYSLS 280

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 398 GAGRSQiasalrpWGRVALDAQGYNLMAYYSGRRSGDQWSLASglpqlddddiwhVEGQLNRPFAGTRGSWVAGASLRSV 477
Cdd:PRK10064  281 HNGRWD-------YGNSELKYYGEKVENKNPGNSSPITSESNS------------IDGKYTLPLTAINQFLTFGGEWRHD 341

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 478 SIDSKGTFLSAADDDRRDSYAALFGQLRYKLAPTWELLGAARYDGSNLYTAQWSPKAALVWSPTTSQRVRLTWNQAFQTP 557
Cdd:PRK10064  342 KLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAP 421

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 558 NPverfleqpagapldlnaleqgLRLSPlgpalggvpngTLFTNSAAVPVLAIGNRNLAVEKVRSAELG--YKGPLGgkG 635
Cdd:PRK10064  422 SL---------------------LQLSP-----------DWTSNSCRGACKIVGSPDLKPETSESWELGlyYMGEEG--W 467

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 636 FVTVDAYYSTLTNFVTNLMA---GANPLYAPwTAPSAVpeaarsalqsaalgvlgpGLTRLPNGGSAYVLSLGNAGRATE 712
Cdd:PRK10064  468 LEGVESSVTVFRNDVDDRISisrTSDVNAAP-GYQNFV------------------GFETNGRGRRVPVFRYYNVNKARI 528

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 713 WGGELSVGYPLSSRLTLEANAAYFRAsvqRNTFVVGDTLLANTPTHMGNVTLTYRAPGGTDASVTTRLVESYAWRSGFYN 792
Cdd:PRK10064  529 QGVETELKIPFNDEWKLSLNYTYNDG---RDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGNYTGQKRADSAT 605

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....*....
gi 1790311778 793 GRVPARQVI-DVVAGHQLSPRVRLQLVATNLLD-QRRYEAFGASVIGRR 839
Cdd:PRK10064  606 AKTPGGYTIwNTGAAWQVTKDVKLRAGVLNLGDkDLSRDDYSYNEDGRR 654

Plug

pfam07715

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...

162-248

2.29e-11

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.

Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 61.13 E-value: 2.29e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 162 LPQVLASMPGVFAPQNGINDF-NVGARGFNSfltRRVLVLQDGRDLAIPTLSAQEWSamSLPLEALGRAEFVRGPGSALY 240
Cdd:pfam07715  25 LADALRGVPGVSVSSGGGGGGsSISIRGFGS---NRVLVLVDGVPLNSGGGGSVDLN--SIDPEDIERVEVLKGPASALY 99


                  ....*...
gi 1790311778 241 GANAFSGV 248
Cdd:pfam07715 100 GSGAIGGV 107

btuB

PRK10641

TonB-dependent vitamin B12 receptor BtuB;

165-269

1.32e-10

TonB-dependent vitamin B12 receptor BtuB;

Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 65.01 E-value: 1.32e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 165 VLASMPGVFAPQNGindfNVGA------RGFNSfltRRVLVLQDGRDLAIPTLSAQewSAMS-LPLEALGRAEFVRGPGS 237
Cdd:PRK10641   65 VLRRLPGVDIAQNG----GLGQlsslfiRGTNS---SHVLVLIDGVRLNQAGISGS--ADLSqIPISLVQRIEYIRGPRS 135

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1790311778 238 ALYGANAFSGVLNIISpaPRDARGSMLAVGGG 269
Cdd:PRK10641  136 AVYGSDAIGGVVNIIT--TRDKPGTTLSAGWG 165

TonB-hemin

TIGR01785

TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...

165-848

3.06e-10

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]

Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 63.95 E-value: 3.06e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 165 VLASMPGVFAPQNG-INDFNVGARGFNSFltrRVLVLQDGRDLAIpTLSAQEWSAMSLPLEALGRAEFVRGPGSALYGAN 243
Cdd:TIGR01785  41 ALNTVPGVDVTGGGrPPGQSINIRGLQDN---RVLVVVDGARQNY-QRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSG 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 244 AFSGVLNIISPAPRDargsmLAVGGGELGtlrADVQHASASDNGRWGWRLNAGYNQSDSWD----ASRTQPGALAREYAA 319
Cdd:TIGR01785 117 ALGGVVAFRTKDAAD-----LLRPGQLFG---GLAKLSYGSNNNSFGGSVAVAGRLDDNLDalvaATYRDGGNYRNGNKE 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 320 AIDTSRYTIAAPLPGFEVRPLIGQtkSGAPGLpGVTTGTPDPMSSAYGSARLDYYRENgaVLTAEagtaEIRNQvfmTGA 399
Cdd:TIGR01785 189 EATNSAYVQKNLLAKLGWQLDDAQ--RLEFSY-FTTEGSLDEAQNSGPGTEYVLGSSS--TLLAS----STRDR---SAT 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 400 GRSQIASALRPWgrvaLDAQgynlMAYYSGRRSGDQWSLASGLPQLD--DDDIWHVEGQLNRPFAGtrGSW---VAGASL 474
Cdd:TIGR01785 257 LTYNWTPEDNPW----LDAT----ASLYYNRTENDNDRSARGVGREEgyQYTTYGATLQNTSRFDV--ASWstlTYGVDW 326

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 475 RSVSIDSKGTFLSAADDDRRDSYAA------LFGQLRYKL-APTWELLGAARYD------GSNLYTA-------QWSPKA 534
Cdd:TIGR01785 327 MKDKRRTESFDPNSVTTIVPNPPSAkeyffgLFLQDNIPLlDDRLTLSAGLRYDhyklspKTTADTEavdrsysRWSPSL 406

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 535 ALVWSPTTSQRVRLTWNQAFQTPNPVERFlEQPAGApldlnaleqglrlsplgpalgGVPNGTLFtnsaavpvlaIGNRN 614
Cdd:TIGR01785 407 GLSYKPVDWLTLYASYSQGFRAPSIDELY-GTGDHP---------------------GTPGGYTF----------APNPN 454

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 615 LAVEKVRSAELGYK----------GPLGGKgfvtVDAYYSTLTNFVTNLMAGANPLYAPwtapsavpeaarsalqsaalg 684
Cdd:TIGR01785 455 LKPETSKTWELGANlsfdnllldnDQLQFK----VAYFYNDVKDFIDLTIGVTDNVTAG--------------------- 509

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 685 vlgpgltrlPNGGSAYVlslgNAGRATEWGGELSVGYPLsSRLTLEANAAYFRASVQrntfvVGDTLLANTPTHMGNVTL 764
Cdd:TIGR01785 510 ---------MNNITQYV----NIDGARIRGIEASASYDA-GLWATGLSYGYTIGKDQ-----NTNQWLSNIPPLKLVVTV 570

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 765 TYRAPgGTDASVTtrlvesyaWRSGFYNGRVPARQVIDVVAGHQL------------------SPRVRLQLVATNLLDQR 826
Cdd:TIGR01785 571 GYRFP-DRRLDLG--------AKAAYYERQSESPTTEDVAANGLLttpgytvvdlyatyqpnaVKGLTVRFGVNNLTDRK 641

                         730       740
                  ....*....|....*....|....
gi 1790311778 827 RYEAFG--ASVIGRRVLGRATYTW 848
Cdd:TIGR01785 642 YTPAQSvpGAGPGRNFKGSVKYQF 665

PRK13528

outer membrane receptor FepA; Provisional

162-846

1.58e-09

outer membrane receptor FepA; Provisional

Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 61.70 E-value: 1.58e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 162 LPQVLASMPGVFAPQNGINdfnvGARGFNSFLTRR------VLVLQDGRdlaiPTLSAQE----WSAMS--------LPL 223
Cdd:PRK13528   70 LSDIIRKMPGVNLTGNSAS----GTRGNNRQIDIRgmgpenTLILIDGV----PVTSRNSvrysWRGERdtrgdtnwVPP 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 224 EALGRAEFVRGPGSALYGANAFSGVLNIISPAP-RDARGSMLAVG-----GGELGTLRADVQHASASDNGRWGWRLNAGY 297
Cdd:PRK13528  142 EMVERIEVIRGPAAARYGSGAAGGVVNIITKRPtNDWHGSLSLYTnqpesSKEGATRRANFSLSGPLAGDALTMRLYGNL 221

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 298 NQ--SDSWDASRTQPG--ALAREYAAAID---------TSRYTIAAPLpGFEVRPLI--GQTKSGApglpgVTTGTPDPM 362
Cdd:PRK13528  222 NKtdADSWDINSSAGTknAAGREGVRNKDingvlswkmTPQQILDFEA-GYSRQGNIyaGDTQNSN-----SSAVTESLA 295

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 363 SSAYGSARLdyYRENGAVL---TAEAGTAEIRNQVFMTGAGRSQIASALRPWGRVAlDAQGYNLMAYYSGRRSGD-QWSL 438
Cdd:PRK13528  296 KSGKETNRL--YRQNYGLThngIWDWGQSRLGFYYEKTNNTRMNEGLAGGGEGRIT-ADQTFTTSRLESYRTSGElNVPL 372

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 439 ASGLPQ-LDDDDIWHVEgQLNRPfagtrgswvAGASLRSVSIDSKGTFLSAADDDRRDS--YAALFGQLRYKLAPTWELL 515
Cdd:PRK13528  373 NWLFEQtLTVGAEWNRD-ELNDP---------SSTSLTVKDGDIGGISGSAADRSSKNKseISALYVEDNIEPVPGTNLI 442

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 516 GAARYDGSNLYTAQWSPKAALVWSPTTSQRVRLTWNQAFQTPNpverfLEQPAgapldlnaleQGLRLSPLGpalggvpN 595
Cdd:PRK13528  443 PGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPN-----LYQSS----------EGYLLYSRG-------N 500

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 596 GTLFTNSAAVPVLaIGNRNLAVEKVRSAELGYKgplggkgfVTVDAYYSTLTNFVTN----LMAGANPLYapwtapsavp 671
Cdd:PRK13528  501 GCPKDITSGGCYL-VGNKNLDPEISVNKEIGLE--------FTVDDYHASVTYFRNDyqnkIVAGDDVIG---------- 561

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 672 eaarsalqsaalgvlgpgltRLPNGgsAYVLSLGNAGRATEWGGELSVGYPL-SSRLTLEANAAYFRASVQRNTfvvGDT 750
Cdd:PRK13528  562 --------------------RTASG--AYILQWQNGGKAVVEGLEGNLLVPLmKDRLNWNTNATYMITSEQKDT---GNP 616

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 751 lLANTPTHMGNVTLTYRAPGGTDASVTTRLV-----ESYAWRSGFYNGRVPARQV-----IDVVAGHQLSPRVRLQLVAT 820
Cdd:PRK13528  617 -LSVIPKYTINSTLDWQITQALSANVNWTLYgkqkpRTHAESRSEETGGLSGKELgayslVGVNVNYDINKNLRLNVGVS 695

                         730       740
                  ....*....|....*....|....*..
gi 1790311778 821 NLLDQRRY-EAFGASVIGRRvlGRATY 846
Cdd:PRK13528  696 NLFDKQIYrEGEGANTYNEP--GRAYY 720

PRK13513

ligand-gated channel protein;

109-287

2.18e-07

ligand-gated channel protein;

Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 54.77 E-value: 2.18e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 109 LTVNAALSTVSVVLPS-------TLVVTTASRSPERIVDAPAAVAVADAIRLADAS---VTGQLPQVlasmPGVFAPQNG 178
Cdd:PRK13513   13 LVIAAAISSQAYAAEKtntatptDTMVVTASGFQQRIQDAPASISVVTREQLENKAyrdVTDALKDV----PGVVVTGGG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 179 INDfNVGARGFNSFLTrrvLVLQDGRdlAIPTLSA----------QEWSAmslPLEALGRAEFVRGPGSALYGANAFSGV 248
Cdd:PRK13513   89 STS-DISIRGMAAKYT---LILVDGK--RVDTRSTrpnsdgsgieQGWLP---PLAAIERIEVVRGPMSSLYGSDAMGGV 159

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1790311778 249 LNIISPaprdargsmlAVGGGELGTLRADVQHASASDNG 287
Cdd:PRK13513  160 INIITR----------KVQKEWHGSLRADATLQEDSKSG 188

CarbopepD_reg_2

pfam13715

CarboxypepD_reg-like domain; This domain family is found in bacteria, archaea and eukaryotes, ...

41-117

1.61e-06

Pssm-ID: 433425 [Multi-domain] Cd Length: 88 Bit Score: 46.82 E-value: 1.61e-06

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790311778  41 IRGRVIATADSTPLAGIHVRVAGSAVGVLTDRLGQYRL-VIPGGSVPLMFFGMGYQAWQTTVTVPARDSLTVNAALST 117
Cdd:pfam13715   1 ISGTVVDENTGEPLPGATVYVKGTTKGTVTDADGNFELkNLPAGTYTLVVSFVGYKTQEKKVTVSNDNTLDVNFLLKE 78

PRK13486

TonB-dependent receptor;

198-796

4.72e-06

TonB-dependent receptor;

Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 50.41 E-value: 4.72e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 198 LVLQDG-RDLAIPTLSAQEWSAMSL----PLEALGRAEFVRGPGSALYGANAFSGVLNIISPAPRDARGSMLAVGggelg 272
Cdd:PRK13486   97 LILIDGvRQGGSSDVTPNGFSAMNTgfmpPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAG----- 171

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 273 tlradvqhASASDNGRWGwrlnaGYNQSDSWDASRTQPGALA--------REYAAAIDTSRYTIAAPLPgfevRPLIGQT 344
Cdd:PRK13486  172 --------LNLQESNKWG-----NSSQFNFWSSGPLVDDSVSlqvrgstqQRQGSSVTSLSDTAATRIP----YPTESQN 234

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 345 KSGAPGLPGVTTGTpDPMSSAYGSARLDYYRENGAVLTAEAGTAEI----RNQV-------FMTGAGRSQIAsalrpWGR 413
Cdd:PRK13486  235 YNLGARLDWKASEQ-DVLWFDMDTTRQRYDNRDGQLGSLTGGYDRTlryeRNKIsagydhtFTFGTWKSYLN-----WNE 308

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 414 ValDAQGYNLMayySGRRSGDQWSLASGLPQLDDDDIWhVEGQLNRPFAGTRGSWVAGASLRSVSIDskGTFLSAADDDR 493
Cdd:PRK13486  309 T--ENKGRELV---RSVLKRDKWGLAGQPRELKESNLI-LNSLLLTPLGESHLVTVGGEFQSSSMKD--GVVLASTGETF 380

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 494 RDSYAALFGQLRYKLAPTWELLGAARYDGSNLYTAQWSPKAALVWSPTTSQRVRLTWNQAFQTPNpverfleqpagapld 573
Cdd:PRK13486  381 RQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPR--------------- 445

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 574 lnaleqglrLSPLGPALGGVpNGTLFTNSaavpvlaIGNRNLAVEKVRSAELGykgplggkgfvtvdAYYSTLTNFVTNL 653
Cdd:PRK13486  446 ---------MGQLHKGISGV-SGQGKTNL-------LGNPDLKPEESVSYEAG--------------VYYDNPAGLNANV 494

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 654 MAganplyapwtapsavpeaarsalqsaalgvlgpGLTRLPNGGSAYVL-----SLGNAGRATEWGGELSVGYPL-SSRL 727
Cdd:PRK13486  495 TG---------------------------------FMTDFSNKIVSYSIndntnSYVNSGKARLHGVEFAGTLPLwSEDV 541

                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1790311778 728 TLEANAAYFRaSVQRNtfvvGDTL---LANTPTHMGNVTLTYRapggtdasvTTRLVESyaWRSGFYNGRVP 796
Cdd:PRK13486  542 TLSLNYTWTR-SEQRD----GDNKgapLSYTPEHMVNAKLNWQ---------ITEEVAS--WLGARYRGKTP 597

PRK13484

IreA family TonB-dependent siderophore receptor;

178-268

7.43e-06

IreA family TonB-dependent siderophore receptor;

Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 49.62 E-value: 7.43e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 178 GINDFNVGARGFNSFLTrrvLVLQDGRDL----AIPTLSAQEWSAMSLPLEALGRAEFVRGPGSALYGANAFSGVLNIIS 253
Cdd:PRK13484   82 GNEKPDISIRGLSGDYT---LILVDGRRQsgreSRPNGSGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIIT 158

                          90
                  ....*....|....*.
gi 1790311778 254 -PAPRDARGSMLAVGG 268
Cdd:PRK13484  159 kPVNNQTWDGVLGLGG 174

PRK13483

ligand-gated channel protein;

222-286

1.01e-05

ligand-gated channel protein;

Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 49.39 E-value: 1.01e-05

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1790311778 222 PLEALGRAEFVRGPGSALYGANAFSGVLNIIS-PAPRDARGSmlavgggelgtLRAD--VQHASASDN 286
Cdd:PRK13483  131 PLAAIERIEVIRGPMSSLYGSDAIGGVINIITrKVPNEWQGE-----------VRLDttLQENSDSGN 187

CarboxypepD_reg

pfam13620

Carboxypeptidase regulatory-like domain;

41-115

8.04e-05

Carboxypeptidase regulatory-like domain;

Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 41.88 E-value: 8.04e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778  41 IRGRVIAtADSTPLAGIHVRVA----GSAVGVLTDRLGQYRLV-IPGGSVPLMFFGMGYQAW-QTTVTVPARDSLTVNAA 114
Cdd:pfam13620   2 ISGTVTD-PSGAPVPGATVTVTntdtGTVRTTTTDADGRYRFPgLPPGTYTVTVSAPGFKTAtRTGVTVTAGQTTTLDVT 80


                  .
gi 1790311778 115 L 115
Cdd:pfam13620  81 L 81

PRK13524

FepA family TonB-dependent siderophore receptor;

222-325

5.13e-04

FepA family TonB-dependent siderophore receptor;

Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 43.86 E-value: 5.13e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 222 PLEALGRAEFVRGPGSALYGANAFSGVLNIISPAP-RDARGSMLAVG-----GGELGTLRADVQHASA-SDNgrWGWRLN 294
Cdd:PRK13524  142 PPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKPtGEWHGSWNTYFnapehKAEGATKRTNFSLSGPlGDE--LSFRLY 219

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1790311778 295 AGYN--QSDSWDASRTQPGALAREYAAAIDTSR 325
Cdd:PRK13524  220 GNLNktQADAWDINQGHQSARTGSYAGTLPAGR 252

PRK10044

ferrichrome outer membrane transporter; Provisional

226-339

1.50e-03

ferrichrome outer membrane transporter; Provisional

Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 42.05 E-value: 1.50e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1790311778 226 LGRAEFVRGPGSALYGANAFSGVLNIIS--PAPRDARGSMLAVGGGELGTLRADVQHAsASDNGRWGWRLNAgynqsDSW 303
Cdd:PRK10044  159 LERAELMRGPVSVLYGKSNPGGLLNMVSkrPTTEPLKEVQFKMGTDNLFQTGFDFSDA-LDDDGVYSYRLTG-----LAR 232

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1790311778 304 DASRTQPGAlareyaaaiDTSRYTIAaplPGFEVRP 339
Cdd:PRK10044  233 SANAQQKGS---------EEQRYAIA---PSFTWRP 256

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01