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Conserved domains on  [gi|2157343071|ref|WP_230469925|]
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ABC transporter permease [Lujinxingia vulgaris]

Protein Classification

molybdate ABC transporter permease subunit( domain architecture ID 10790565)

molybdate ABC transporter permease subunit is the transmembrane subunit found in a periplasmic binding protein (PBP)-dependent ABC transport system involved in the transport of molybdenum

Gene Ontology:  GO:0043190|GO:0140359|GO:0042626|GO:0016020|GO:0015098|GO:0015689
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 71-257 7.15e-60

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


:

Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 189.10  E-value: 7.15e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESV-GVSLPFTSAAVVVAQVVVAAPFFV 149
Cdd:COG4149    27 GIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELfGISLVFTWTGAVLASVVVSLPLMV 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 150 QAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAA 229
Cdd:COG4149   107 QPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFGATLMFAGNIPGKTQTLPLAIYDA 186

                         170       180
                  ....*....|....*....|....*....
gi 2157343071 230 LER-DVSLAVTFALALAAIATVILLALRL 257
Cdd:COG4149   187 VEAgDYAAAHALSLILLAISFVVLLLLNL 215
 
Name Accession Description Interval E-value
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 71-257 7.15e-60

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 189.10  E-value: 7.15e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESV-GVSLPFTSAAVVVAQVVVAAPFFV 149
Cdd:COG4149    27 GIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELfGISLVFTWTGAVLASVVVSLPLMV 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 150 QAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAA 229
Cdd:COG4149   107 QPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFGATLMFAGNIPGKTQTLPLAIYDA 186

                         170       180
                  ....*....|....*....|....*....
gi 2157343071 230 LER-DVSLAVTFALALAAIATVILLALRL 257
Cdd:COG4149   187 VEAgDYAAAHALSLILLAISFVVLLLLNL 215
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 66-257 3.85e-55

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 176.67  E-value: 3.85e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  66 VVVAGGLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAA 145
Cdd:TIGR02141  13 LLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFTGAVLASVIVSF 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 146 PFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIA 225
Cdd:TIGR02141  93 PLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNIPGETQTIPLA 172

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2157343071 226 IYAALERDVSLAVTFALALAAIATVILLALRL 257
Cdd:TIGR02141 173 IYDAVESDYELAHQLSLVLLAISLIVLLLVEL 204
modB PRK09421
molybdate ABC transporter permease subunit;
71-254 1.54e-33

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 121.57  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLES-VGVSLPFTSAAVVVAQVVVAAPFFV 149
Cdd:PRK09421   29 GILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEwFGISFAFSWRGAALAAAVMAFPLMV 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 150 QAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAA 229
Cdd:PRK09421  109 RAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGATITFVSNIPGETQTIPSAMYTL 188

                         170       180
                  ....*....|....*....|....*
gi 2157343071 230 LErdVSLAVTFALALAAIATVILLA 254
Cdd:PRK09421  189 IQ--TPGGESAAARLCIISIAIALA 211
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 71-250 7.79e-16

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 73.47  E-value: 7.79e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGvlesvgvsLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:cd06261    19 GLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGI--------LPGLGLPALILALLLIAPFARL 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAAL 230
Cdd:cd06261    91 IRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGLLLIFAIL 170

                         170       180
                  ....*....|....*....|
gi 2157343071 231 ERDVSLAVTFALALAAIATV 250
Cdd:cd06261   171 FPGDLGVAAAVALILLLLSL 190
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 71-257 1.16e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 56.15  E-value: 1.16e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIAR-LVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSaavvvaqvvvaaPFFV 149
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDrLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWA------------GYAR 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 150 QAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFgATLIFAGSLPGITQTMPIAIyaa 229
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGA-VLLEFLGSWPGLGLLLIEAI--- 144

                         170       180
                  ....*....|....*....|....*...
gi 2157343071 230 LERDVSLAVTFALALAAIATVILLALRL 257
Cdd:pfam00528 145 LGYDYPEIQGPVLAAALILLLLNLLVDI 172
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 71-226 1.55e-07

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 50.24  E-value: 1.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVlesvgvSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:NF038017   16 GIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTPTAMIIAQAVLALPIVAG 89

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALpGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAI 226
Cdd:NF038017   90 LTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARF-ALLAAVLAGFGRAISEVGAVMMVGGNIRGYTRVLTTAI 164
 
Name Accession Description Interval E-value
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 71-257 7.15e-60

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 189.10  E-value: 7.15e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESV-GVSLPFTSAAVVVAQVVVAAPFFV 149
Cdd:COG4149    27 GIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELfGISLVFTWTGAVLASVVVSLPLMV 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 150 QAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAA 229
Cdd:COG4149   107 QPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFGATLMFAGNIPGKTQTLPLAIYDA 186

                         170       180
                  ....*....|....*....|....*....
gi 2157343071 230 LER-DVSLAVTFALALAAIATVILLALRL 257
Cdd:COG4149   187 VEAgDYAAAHALSLILLAISFVVLLLLNL 215
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 35-257 1.91e-55

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 179.56  E-value: 1.91e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  35 ISPAELWAGVQDARFGPALLLSLRTSLLSLGVVVAGGLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGR 114
Cdd:COG0555    38 LGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGP 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 115 RGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGA 194
Cdd:COG0555   118 NGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGF 197

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2157343071 195 SLAWARALGEFGATLIFAGSLPGITQTMPIAIYAALER-DVSLAVTFALALAAIATVILLALRL 257
Cdd:COG0555   198 ALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEgDYAGATAIALVLLLISFLLLLLINL 261
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 66-257 3.85e-55

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 176.67  E-value: 3.85e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  66 VVVAGGLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAA 145
Cdd:TIGR02141  13 LLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFTGAVLASVIVSF 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 146 PFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIA 225
Cdd:TIGR02141  93 PLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNIPGETQTIPLA 172

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2157343071 226 IYAALERDVSLAVTFALALAAIATVILLALRL 257
Cdd:TIGR02141 173 IYDAVESDYELAHQLSLVLLAISLIVLLLVEL 204
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 71-253 4.69e-44

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 148.70  E-value: 4.69e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:TIGR01581  41 GIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFGRNGLLGPYLEAAGIQVIFSTLGVVLAQTFVASPYYVR 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAAL 230
Cdd:TIGR01581 121 VARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWARALGEFGATLMFAGSIQGKTRTLPLAIYLNI 200

                         170       180
                  ....*....|....*....|....
gi 2157343071 231 ERD-VSLAVTFALALAAIATVILL 253
Cdd:TIGR01581 201 QSDnIEAAVASALLLLVIAFLLLL 224
modB PRK09421
molybdate ABC transporter permease subunit;
71-254 1.54e-33

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 121.57  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLES-VGVSLPFTSAAVVVAQVVVAAPFFV 149
Cdd:PRK09421   29 GILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEwFGISFAFSWRGAALAAAVMAFPLMV 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 150 QAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAA 229
Cdd:PRK09421  109 RAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGATITFVSNIPGETQTIPSAMYTL 188

                         170       180
                  ....*....|....*....|....*
gi 2157343071 230 LErdVSLAVTFALALAAIATVILLA 254
Cdd:PRK09421  189 IQ--TPGGESAAARLCIISIAIALA 211
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 71-253 4.44e-29

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 110.91  E-value: 4.44e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:TIGR00969  80 GLLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVVR 159

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAAL 230
Cdd:TIGR00969 160 EVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEERL 239

                         170       180
                  ....*....|....*....|....
gi 2157343071 231 ER-DVSLAVTFALALAAIATVILL 253
Cdd:TIGR00969 240 EQyDYPGAYVIAAVLLLVSLVTLF 263
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 71-257 2.88e-28

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 108.95  E-value: 2.88e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:TIGR02139  70 GTLLAWVLVRYRFPGKRIVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVR 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAAL 230
Cdd:TIGR02139 150 TVQPVLEEIEKELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKL 229

                         170       180
                  ....*....|....*....|....*...
gi 2157343071 231 ER-DVSLAVTFALALAAIATVILLALRL 257
Cdd:TIGR02139 230 EQyDYAGATAIASVMLIISFVILLFINL 257
cysT CHL00187
sulfate transport protein; Provisional
 71-233 2.66e-26

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 102.79  E-value: 2.66e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:CHL00187   75 GLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVR 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAAL 230
Cdd:CHL00187  155 TIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNIPFKDLVASVLIFQSL 234


                  ...
gi 2157343071 231 ERD 233
Cdd:CHL00187  235 EQY 237
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 71-254 1.10e-21

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 90.91  E-value: 1.10e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:TIGR02140  67 GVCAAWVLTRFQFPGKRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVAR 146

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIyAAL 230
Cdd:TIGR02140 147 ELIPVMEEQGTEQEEAALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHV-ELL 225

                         170       180
                  ....*....|....*....|....*.
gi 2157343071 231 ERDVSLAVTFALA--LAAIATVILLA 254
Cdd:TIGR02140 226 YNEYQSYAAFAAAslLALLALVTLVL 251
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 71-255 3.47e-21

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 89.79  E-value: 3.47e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSaavvvaqvvvaaPFFVQ 150
Cdd:COG1177    81 GTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGLILAHVVFTL------------PFVVL 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLpgiTQTMPIAIYAAL 230
Cdd:COG1177   149 VVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPG---VTTLPVYIYSMI 225

                         170       180
                  ....*....|....*....|....*
gi 2157343071 231 ERDVSlAVTFALALAAIATVILLAL 255
Cdd:COG1177   226 RRGIS-PEINALSTLLILLSLLLLL 249
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
66-261 1.80e-19

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 87.52  E-value: 1.80e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  66 VVVAGGLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRrgllggvleSVGVSLPFTSAAVVVAQVVVAA 145
Cdd:COG1178   353 LAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNR---------PLPLLLYGTLAILVLAYVVRFL 423

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 146 PFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAgslPGITQTMPIA 225
Cdd:COG1178   424 PFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLR---PPGFETLAVL 500

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2157343071 226 IYAALER-DVSLAVTFALALAAIATVILLALRLGPGR 261
Cdd:COG1178   501 IYQLASSgRYGEAAALALLLVLVSLLPVLLLERLLGR 537
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
66-272 2.89e-19

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 86.75  E-value: 2.89e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  66 VVVAGGLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESV-GVSLP--FTSAAVVVAQVV 142
Cdd:COG1178    69 LSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALfGLEPPdiYGLGGIILVLVL 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 143 VAAPFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLpgitQTM 222
Cdd:COG1178   149 FNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGY----TTL 224

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2157343071 223 PIAIYAAL--ERDVSLAVTFALALAAIATVILLALRLGPGRGVGAGLRRGRR 272
Cdd:COG1178   225 TTAIYQAWlgDFDLGAAAALALVLLLLVLLLLLLERRLRRRRRYATVGGRAR 276
CysW COG4208
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 71-254 1.51e-18

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 443356  Cd Length: 281  Bit Score: 82.85  E-value: 1.51e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTsaavvvaqvvvaAPFFVq 150
Cdd:COG4208    83 GVAAAWAITRFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFA------------VPGIV- 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 aAATAFRS----VRE----------EQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLP 216
Cdd:COG4208   150 -LATIFVTfpfvAREliplmqeqgtDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIR 228

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 2157343071 217 GITQTMPIAIYAA-LERDVSLAVTFALALAAIATVILLA 254
Cdd:COG4208   229 GETNTLPLHVEILyNEYNFVAAFAVASLLALLALVTLVL 267
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
71-254 2.20e-18

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 82.49  E-value: 2.20e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:PRK10971   78 GLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVR 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAAL 230
Cdd:PRK10971  158 TVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRL 237

                         170       180
                  ....*....|....*....|....*
gi 2157343071 231 -ERDVSlavtfalALAAIATVILLA 254
Cdd:PRK10971  238 qEFDYP-------AASAIASVILAA 255
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 71-250 7.79e-16

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 73.47  E-value: 7.79e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGvlesvgvsLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:cd06261    19 GLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGI--------LPGLGLPALILALLLIAPFARL 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIYAAL 230
Cdd:cd06261    91 IRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGLLLIFAIL 170

                         170       180
                  ....*....|....*....|
gi 2157343071 231 ERDVSLAVTFALALAAIATV 250
Cdd:cd06261   171 FPGDLGVAAAVALILLLLSL 190
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
71-252 9.25e-14

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 69.40  E-value: 9.25e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:PRK11602   84 GILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIFVTCPFVVR 163

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAIyAAL 230
Cdd:PRK11602  164 ELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQI-ELL 242

                         170       180
                  ....*....|....*....|....*.
gi 2157343071 231 ERDVSLAVTFA----LALAAIATVIL 252
Cdd:PRK11602  243 EQDYNTVGSFTaaalLTLMAIITLFL 268
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 71-256 1.44e-13

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 69.02  E-value: 1.44e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGV-----SLPFTSAAVVVAQVVVAA 145
Cdd:COG1176    87 GYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLALGLideplRLLYTEFAVVIGLVYVYL 166

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 146 PFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGslpGITQTMPIA 225
Cdd:COG1176   167 PFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGG---GKVLMIGNL 243

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2157343071 226 IY--AALERDVSLAVTFALALAAIATVILLALR 256
Cdd:COG1176   244 IYqqFLSALNWPLAAALAVVLLLIVLLVLLLYL 276
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 86-258 2.52e-10

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 59.63  E-value: 2.52e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  86 ARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVG------VSLPFTSAAVVVAQVVVAAPFFVQAAATAFRSV 159
Cdd:PRK15050  108 ASLVGRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALQRLFgleappLDFLYSPGGVILAEITFYTPFVVRPLLAAFAQL 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 160 REEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLiFAGSLPGItqTMPIAIYAalerdvSLAVT 239
Cdd:PRK15050  188 DARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVL-FTGAKDVV--TLPVLIYS------KAIVD 258

                         170
                  ....*....|....*....
gi 2157343071 240 FALALAAIATVILLALRLG 258
Cdd:PRK15050  259 FDYPTACAIAVVNLALSLG 277
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 71-257 1.16e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 56.15  E-value: 1.16e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIAR-LVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFTSaavvvaqvvvaaPFFV 149
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDrLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWA------------GYAR 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 150 QAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFgATLIFAGSLPGITQTMPIAIyaa 229
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGA-VLLEFLGSWPGLGLLLIEAI--- 144

                         170       180
                  ....*....|....*....|....*...
gi 2157343071 230 LERDVSLAVTFALALAAIATVILLALRL 257
Cdd:pfam00528 145 LGYDYPEIQGPVLAAALILLLLNLLVDI 172
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 71-226 1.55e-07

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 50.24  E-value: 1.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVlesvgvSLPFTSAAVVVAQVVVAAPFFVQ 150
Cdd:NF038017   16 GIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTPTAMIIAQAVLALPIVAG 89

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALpGLVAGASLAWARALGEFGATLIFAGSLPGITQTMPIAI 226
Cdd:NF038017   90 LTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARF-ALLAAVLAGFGRAISEVGAVMMVGGNIRGYTRVLTTAI 164
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 146-272 3.21e-07

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 50.03  E-value: 3.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 146 PFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEfGATLIFAG--------SLPG 217
Cdd:COG0581   127 PVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGE-TAPLLFTAgvspflplSLFD 205

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2157343071 218 ITQTMPIAIYAALERDVSLAVTFALALAAIATVILLALRLGpGRGVGAGLRRGRR 272
Cdd:COG0581   206 PFATLPVHIYNLASSPYPAAQELAWAAALVLLLLVLLLNLL-ARLLRRRFRKKLK 259
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 155-219 7.67e-07

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 49.32  E-value: 7.67e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2157343071 155 AFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPGIT 219
Cdd:COG0573   178 ALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAGNAPQIP 242
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 82-258 1.94e-06

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 48.00  E-value: 1.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  82 RSRIARLVEVLVDLPLVLPPAVVGV-GLLMAYGRRGLLGGVLESVGVSLPFtsaavvvaqvvVAAPFFVQAAATAFRSVR 160
Cdd:TIGR00974  87 GSRFTKIIRFAVDILAGVPSIVVGLfGYGFFVLTYLGGGFSLLAGALALAL-----------LILPVIIRTTEEALKAVP 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 161 EEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAG-------SLPGITQTMPIAIYA-ALER 232
Cdd:TIGR00974 156 KDLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGgsaftppNLFDPFATLPVLIYNlASEG 235

                         170       180
                  ....*....|....*....|....*.
gi 2157343071 233 DVSLAVTFALALAAIATVILLALRLG 258
Cdd:TIGR00974 236 PYVEAQQLAWAAALVLIVLVLLLNLI 261
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 155-213 1.09e-05

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 45.72  E-value: 1.09e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2157343071 155 AFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAG 213
Cdd:TIGR02138 173 ALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIG 231
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 71-205 4.85e-05

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 43.91  E-value: 4.85e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  71 GLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGV-----SLPFTSAAVVVAQVVVAA 145
Cdd:PRK09497   83 GYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVidtpiRIMFTESAVIIGLVYILL 162

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 146 PFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEF 205
Cdd:PRK09497  163 PFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMF 222
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 151-202 7.21e-05

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 43.21  E-value: 7.21e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2157343071 151 AAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARAL 202
Cdd:COG0600   143 NTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAW 194
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 68-132 2.71e-03

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 39.05  E-value: 2.71e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2157343071  68 VAGGLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLESVGVSLPFT 132
Cdd:PRK09433   61 VLPAIPLARALYRRRFPGRGLLLRLCAMTLVLPVLVAVFGLLSVYGRSGWLAQLLQALGLEWPFS 125
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 66-255 8.38e-03

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 37.00  E-value: 8.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071  66 VVVAGGLPLAWWLARSRSRIARLVEVLVDLPLVLPPAVVGVGLLMAYGRRGLLGGVLesvGVSLPFTsaavvvaqvVVAA 145
Cdd:COG0395    89 LSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGLLNTYW---GLILPYL---------AFGL 156

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2157343071 146 PFFVQAAATAFRSVREEQLLVAQTLGASRAEAIWRVAVPAALPGLVAGASLAWARALGEFGATLIFAGSLPgiTQTMPIA 225
Cdd:COG0395   157 PFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPD--LRTLPVG 234

                         170       180       190
                  ....*....|....*....|....*....|.
gi 2157343071 226 IYAAL-ERDVSLAVTFALALAAIATVILLAL 255
Cdd:COG0395   235 LASFQgQYGTDWGLLMAAAVIATLPVLILFL 265
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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