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Conserved domains on  [gi|2562506263|ref|WP_305775589|]
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alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ [Pseudovibrio sp. Alg231-02]

Protein Classification

alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ( domain architecture ID 10007623)

alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ is part of the C-P lyase complex, which is responsible for processing phophonates into usable phosphate

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PhnJ COG3627
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJ [Inorganic ion transport and ...
 3-283 0e+00

Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJ [Inorganic ion transport and metabolism];


:

Pssm-ID: 442845  Cd Length: 290  Bit Score: 571.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263   3 DEHYNFAYLDEQTKRMIRRAILKGIAVPGYQVPFAAREMPMPYGWGTGGIQVTAAVIGKHDCLKMIDQGSDDTTNAVALR 82
Cdd:COG3627     6 DAGYNFAYLDEQTKREIRRAILKAVAIPGYQVPFASREMPIARGWGTGGLQVTLSLIGPDDVLKVIDQGSDDTVNAVNIR 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263  83 NFFVETTGVDTTTKTKDASIIQTRHRIPEETLTKDQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIAK 162
Cdd:COG3627    86 RFFARTTGVATTTDTEEATLIQTRHRIPEEPLREDQILVLQVPIPEPLRFVEPSETETRRMHAEADYGRMWVKLYEDIVR 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263 163 FGHIATAYAYPVMVQDRYVMDPSPTPKFDNPKMDQMEALQLFGAGREKRIYAIPPHTKVVSLDFEDHPFEVTKF-DQPCA 241
Cdd:COG3627   166 FGEIATGYDYPVMVNGRYVMDPSPIPRFDNPKLHMSPALQLFGAGREKRIYAVPPYTDVESLDFEDHPFEVEDFdGRACA 245

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 2562506263 242 ICGAEEVYLDEVILDDDGNRMFVCSDSDFCEERREAGHVGHL 283
Cdd:COG3627   246 LCGATDSFLDEVIDDDTGERMYVCSDTDYCAERRAAAEAAPD 287
 
Name Accession Description Interval E-value
PhnJ COG3627
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJ [Inorganic ion transport and ...
 3-283 0e+00

Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJ [Inorganic ion transport and metabolism];


Pssm-ID: 442845  Cd Length: 290  Bit Score: 571.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263   3 DEHYNFAYLDEQTKRMIRRAILKGIAVPGYQVPFAAREMPMPYGWGTGGIQVTAAVIGKHDCLKMIDQGSDDTTNAVALR 82
Cdd:COG3627     6 DAGYNFAYLDEQTKREIRRAILKAVAIPGYQVPFASREMPIARGWGTGGLQVTLSLIGPDDVLKVIDQGSDDTVNAVNIR 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263  83 NFFVETTGVDTTTKTKDASIIQTRHRIPEETLTKDQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIAK 162
Cdd:COG3627    86 RFFARTTGVATTTDTEEATLIQTRHRIPEEPLREDQILVLQVPIPEPLRFVEPSETETRRMHAEADYGRMWVKLYEDIVR 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263 163 FGHIATAYAYPVMVQDRYVMDPSPTPKFDNPKMDQMEALQLFGAGREKRIYAIPPHTKVVSLDFEDHPFEVTKF-DQPCA 241
Cdd:COG3627   166 FGEIATGYDYPVMVNGRYVMDPSPIPRFDNPKLHMSPALQLFGAGREKRIYAVPPYTDVESLDFEDHPFEVEDFdGRACA 245

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 2562506263 242 ICGAEEVYLDEVILDDDGNRMFVCSDSDFCEERREAGHVGHL 283
Cdd:COG3627   246 LCGATDSFLDEVIDDDTGERMYVCSDTDYCAERRAAAEAAPD 287
PhnJ pfam06007
Phosphonate metabolism protein PhnJ; This family consists of several bacterial phosphonate ...
 4-276 0e+00

Phosphonate metabolism protein PhnJ; This family consists of several bacterial phosphonate metabolism (PhnJ) sequences. The exact role that PhnJ plays in phosphonate utilization is unknown.


Pssm-ID: 428719  Cd Length: 274  Bit Score: 533.35  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263   4 EHYNFAYLDEQTKRMIRRAILKGIAVPGYQVPFAAREMPMPYGWGTGGIQVTAAVIGKHDCLKMIDQGSDDTTNAVALRN 83
Cdd:pfam06007   1 QGYNFAFLDEQTKREIRRAILKAVAIPGYQVPFASREMPIARGWGTGGLQLTLSLIGPDDVLKVIDQGSDDSVNAVNIRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263  84 FFVETTGVDTTTKTKDASIIQTRHRIPEETLTKDQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIAKF 163
Cdd:pfam06007  81 FIARTTGVETTTDTAEATLIQTRHRIPEEPLTEGQILVLQVPIPEPLRWVEPSEAETRKMHAEADYGLMWVKLYEDIARF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263 164 GHIATAYAYPVMVQDRYVMDPSPTPKFDNPKMDQMEALQLFGAGREKRIYAIPPHTKVVSLDFEDHPFEVTKFD-QPCAI 242
Cdd:pfam06007 161 GEIATSYDYPVLVNGRYVMDPSPIPRFDNPKLHMSPALQLFGAGREKRIYAVPPYTDVEPLDFEDHPFEVEDFDgKACAL 240

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2562506263 243 CGAEEVYLDEVILDDDGNRMFVCSDSDFCEERRE 276
Cdd:pfam06007 241 CGSTDSFLDEVIDDDAGERMYQCSDTDYCEERRA 274
 
Name Accession Description Interval E-value
PhnJ COG3627
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJ [Inorganic ion transport and ...
 3-283 0e+00

Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJ [Inorganic ion transport and metabolism];


Pssm-ID: 442845  Cd Length: 290  Bit Score: 571.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263   3 DEHYNFAYLDEQTKRMIRRAILKGIAVPGYQVPFAAREMPMPYGWGTGGIQVTAAVIGKHDCLKMIDQGSDDTTNAVALR 82
Cdd:COG3627     6 DAGYNFAYLDEQTKREIRRAILKAVAIPGYQVPFASREMPIARGWGTGGLQVTLSLIGPDDVLKVIDQGSDDTVNAVNIR 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263  83 NFFVETTGVDTTTKTKDASIIQTRHRIPEETLTKDQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIAK 162
Cdd:COG3627    86 RFFARTTGVATTTDTEEATLIQTRHRIPEEPLREDQILVLQVPIPEPLRFVEPSETETRRMHAEADYGRMWVKLYEDIVR 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263 163 FGHIATAYAYPVMVQDRYVMDPSPTPKFDNPKMDQMEALQLFGAGREKRIYAIPPHTKVVSLDFEDHPFEVTKF-DQPCA 241
Cdd:COG3627   166 FGEIATGYDYPVMVNGRYVMDPSPIPRFDNPKLHMSPALQLFGAGREKRIYAVPPYTDVESLDFEDHPFEVEDFdGRACA 245

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 2562506263 242 ICGAEEVYLDEVILDDDGNRMFVCSDSDFCEERREAGHVGHL 283
Cdd:COG3627   246 LCGATDSFLDEVIDDDTGERMYVCSDTDYCAERRAAAEAAPD 287
PhnJ pfam06007
Phosphonate metabolism protein PhnJ; This family consists of several bacterial phosphonate ...
 4-276 0e+00

Phosphonate metabolism protein PhnJ; This family consists of several bacterial phosphonate metabolism (PhnJ) sequences. The exact role that PhnJ plays in phosphonate utilization is unknown.


Pssm-ID: 428719  Cd Length: 274  Bit Score: 533.35  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263   4 EHYNFAYLDEQTKRMIRRAILKGIAVPGYQVPFAAREMPMPYGWGTGGIQVTAAVIGKHDCLKMIDQGSDDTTNAVALRN 83
Cdd:pfam06007   1 QGYNFAFLDEQTKREIRRAILKAVAIPGYQVPFASREMPIARGWGTGGLQLTLSLIGPDDVLKVIDQGSDDSVNAVNIRR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263  84 FFVETTGVDTTTKTKDASIIQTRHRIPEETLTKDQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIAKF 163
Cdd:pfam06007  81 FIARTTGVETTTDTAEATLIQTRHRIPEEPLTEGQILVLQVPIPEPLRWVEPSEAETRKMHAEADYGLMWVKLYEDIARF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562506263 164 GHIATAYAYPVMVQDRYVMDPSPTPKFDNPKMDQMEALQLFGAGREKRIYAIPPHTKVVSLDFEDHPFEVTKFD-QPCAI 242
Cdd:pfam06007 161 GEIATSYDYPVLVNGRYVMDPSPIPRFDNPKLHMSPALQLFGAGREKRIYAVPPYTDVEPLDFEDHPFEVEDFDgKACAL 240

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2562506263 243 CGAEEVYLDEVILDDDGNRMFVCSDSDFCEERRE 276
Cdd:pfam06007 241 CGSTDSFLDEVIDDDAGERMYQCSDTDYCEERRA 274
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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