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Conserved domains on  [gi|2686872248|ref|WP_333784327|]
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transketolase [Thermocrinis sp.]

Protein Classification

transketolase family protein( domain architecture ID 11414320)

transketolase family protein such as transketolase, which catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate

EC:  2.2.1.-
Gene Ontology:  GO:0016744
PubMed:  9924800

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
TktA COG0021
Transketolase [Carbohydrate transport and metabolism]; Transketolase is part of the Pathway ...
9-662 0e+00

Transketolase [Carbohydrate transport and metabolism]; Transketolase is part of the Pathway/BioSystem: Pentose phosphate pathway


:

Pssm-ID: 439792 [Multi-domain]  Cd Length: 661  Bit Score: 1174.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248   9 TEKDLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGY 88
Cdd:COG0021     1 MPLDQLAANAIRALAMDAVQKANSGHPGLPMGMAPIAYVLWTKFLKHNPANPKWPNRDRFVLSAGHGSMLLYSLLHLTGY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  89 DLDIEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLME 168
Cdd:COG0021    81 DLSLDDLKNFRQLGSKTPGHPEYGHTPGVETTTGPLGQGIANAVGMAIAERHLAARFNRPGHDIVDHYTYVIAGDGDLME 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 169 GVSSEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKEKPSF 248
Cdd:COG0021   161 GISHEAASLAGHLKLGKLIVLYDDNGISIDGDTDLAFSEDVAKRFEAYGWHVIRVEDGHDLEAIDAAIEAAKAETDKPTL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 249 ISVRTHLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEDEFFVPEEVWLYRSEKIKKGELLEKQWQEMFQEYVKKYP 327
Cdd:COG0021   241 IICKTIIGYGSPnKQGTAKAHGAPLGAEEIAATKEALGWPPEPFEVPDEVYAHWRAAGERGAAAEAEWNERFAAYAAAYP 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 328 QEGELLLKVFSRDWGEDYKNVLPDF---REPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDF----PKG 400
Cdd:COG0021   321 ELAAELERRLAGELPEDWDAALPAFeadAKGVATRKASGKVLNALAPVLPELIGGSADLAGSNKTTIKGAGSFspedPSG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 401 RNLHFGVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSL 480
Cdd:COG0021   401 RNIHFGVREHAMGAIMNGIALHGGLRPYGGTFLVFSDYMRPAIRLAALMKLPVIYVFTHDSIGLGEDGPTHQPVEQLASL 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 481 RLIPNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRQKYSSHwECLKGAYVLADGGEETQVVIFASGSEV 560
Cdd:COG0021   481 RAIPNLDVIRPADANETAAAWKLALERKDGPTALILSRQNLPTLDRTAAAAE-GVAKGAYVLADAEGTPDVILIATGSEV 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 561 HPALKAKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVKKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPG 640
Cdd:COG0021   560 SLAVEAAELLAAEGIKVRVVSMPSWELFEAQDAAYRESVLPPAVRARVAVEAGVTDGWYKYVGLDGAVIGIDTFGASAPA 639
                         650       660
                  ....*....|....*....|..
gi 2686872248 641 EKLMEHFGFVGEEIARRIERWL 662
Cdd:COG0021   640 KVLFEEFGFTVENVVAAAKELL 661
 
Name Accession Description Interval E-value
TktA COG0021
Transketolase [Carbohydrate transport and metabolism]; Transketolase is part of the Pathway ...
9-662 0e+00

Transketolase [Carbohydrate transport and metabolism]; Transketolase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439792 [Multi-domain]  Cd Length: 661  Bit Score: 1174.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248   9 TEKDLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGY 88
Cdd:COG0021     1 MPLDQLAANAIRALAMDAVQKANSGHPGLPMGMAPIAYVLWTKFLKHNPANPKWPNRDRFVLSAGHGSMLLYSLLHLTGY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  89 DLDIEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLME 168
Cdd:COG0021    81 DLSLDDLKNFRQLGSKTPGHPEYGHTPGVETTTGPLGQGIANAVGMAIAERHLAARFNRPGHDIVDHYTYVIAGDGDLME 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 169 GVSSEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKEKPSF 248
Cdd:COG0021   161 GISHEAASLAGHLKLGKLIVLYDDNGISIDGDTDLAFSEDVAKRFEAYGWHVIRVEDGHDLEAIDAAIEAAKAETDKPTL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 249 ISVRTHLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEDEFFVPEEVWLYRSEKIKKGELLEKQWQEMFQEYVKKYP 327
Cdd:COG0021   241 IICKTIIGYGSPnKQGTAKAHGAPLGAEEIAATKEALGWPPEPFEVPDEVYAHWRAAGERGAAAEAEWNERFAAYAAAYP 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 328 QEGELLLKVFSRDWGEDYKNVLPDF---REPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDF----PKG 400
Cdd:COG0021   321 ELAAELERRLAGELPEDWDAALPAFeadAKGVATRKASGKVLNALAPVLPELIGGSADLAGSNKTTIKGAGSFspedPSG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 401 RNLHFGVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSL 480
Cdd:COG0021   401 RNIHFGVREHAMGAIMNGIALHGGLRPYGGTFLVFSDYMRPAIRLAALMKLPVIYVFTHDSIGLGEDGPTHQPVEQLASL 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 481 RLIPNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRQKYSSHwECLKGAYVLADGGEETQVVIFASGSEV 560
Cdd:COG0021   481 RAIPNLDVIRPADANETAAAWKLALERKDGPTALILSRQNLPTLDRTAAAAE-GVAKGAYVLADAEGTPDVILIATGSEV 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 561 HPALKAKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVKKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPG 640
Cdd:COG0021   560 SLAVEAAELLAAEGIKVRVVSMPSWELFEAQDAAYRESVLPPAVRARVAVEAGVTDGWYKYVGLDGAVIGIDTFGASAPA 639
                         650       660
                  ....*....|....*....|..
gi 2686872248 641 EKLMEHFGFVGEEIARRIERWL 662
Cdd:COG0021   640 KVLFEEFGFTVENVVAAAKELL 661
PRK05899 PRK05899
transketolase; Reviewed
9-662 0e+00

transketolase; Reviewed


Pssm-ID: 235639 [Multi-domain]  Cd Length: 586  Bit Score: 928.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248   9 TEKDLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGY 88
Cdd:PRK05899    5 MELLQLLANAIRVLSIDAVQKANSGHPGMPMGAADIAYVLWTRFLRHDPKNPKWPNRDRFVLSAGHGSMLLYSLLHLAGY 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  89 DLDIEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLME 168
Cdd:PRK05899   85 DLSIDDLKNFRQLGSKTPGHPEYGHTPGVETTTGPLGQGLANAVGMALAEKYLAALFNRPGLDIVDHYTYVLCGDGDLME 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 169 GVSSEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVeDGYDLEKLEKAIKKALEQKeKPSF 248
Cdd:PRK05899  165 GISHEACSLAGHLKLGNLIVIYDDNRISIDGPTEGWFTEDVKKRFEAYGWHVIEV-DGHDVEAIDAAIEEAKAST-KPTL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 249 ISVRTHLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEdeffvpeevwlyrsekikkgellekqwqemfqeyvkkyp 327
Cdd:PRK05899  243 IIAKTIIGKGAPnKEGTHKVHGAPLGAEEIAAAKKELGWDY--------------------------------------- 283
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 328 qegelllkvfsrdwgedyknvlpdfrepmatRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDFPK----GRNL 403
Cdd:PRK05899  284 -------------------------------RKASGKALNALAKALPELVGGSADLAGSNNTKIKGSKDFAPedysGRYI 332
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 404 HFGVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLI 483
Cdd:PRK05899  333 HYGVREFAMAAIANGLALHGGFIPFGGTFLVFSDYARNAIRLAALMKLPVIYVFTHDSIGVGEDGPTHQPVEQLASLRAI 412
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 484 PNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRQKYSShwECLKGAYVLADGGeetQVVIFASGSEVHPA 563
Cdd:PRK05899  413 PNLTVIRPADANETAAAWKYALERKDGPSALVLTRQNLPVLERTAQEE--GVAKGGYVLRDDP---DVILIATGSEVHLA 487
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 564 LKAKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVKKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPGEKL 643
Cdd:PRK05899  488 LEAADELEAEGIKVRVVSMPSTELFDEQDAAYKESVLPAAVTARVAVEAGVADGWYKYVGLDGKVLGIDTFGASAPADEL 567
                         650
                  ....*....|....*....
gi 2686872248 644 MEHFGFVGEEIARRIERWL 662
Cdd:PRK05899  568 FKEFGFTVENIVAAAKELL 586
tktlase_bact TIGR00232
transketolase, bacterial and yeast; This model is designed to capture orthologs of bacterial ...
14-662 0e+00

transketolase, bacterial and yeast; This model is designed to capture orthologs of bacterial transketolases. The group includes two from the yeast Saccharomyces cerevisiae but excludes dihydroxyactetone synthases (formaldehyde transketolases) from various yeasts and the even more distant mammalian transketolases. Among the family of thiamine diphosphate-dependent enzymes that includes transketolases, dihydroxyacetone synthases, pyruvate dehydrogenase E1-beta subunits, and deoxyxylulose-5-phosphate synthases, mammalian and bacterial transketolases seem not to be orthologous. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 272974 [Multi-domain]  Cd Length: 653  Bit Score: 901.39  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  14 LLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYDLDIE 93
Cdd:TIGR00232   2 KLANAIRHLSMDAIQKAKSGHPGAPMGAAPIAEVLWTKFLKFNPTNPKWINRDRFVLSNGHGSMLLYSLLHLTGYDLSIE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  94 DLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLMEGVSSE 173
Cdd:TIGR00232  82 DLKQFRQLHSKTPGHPEYGHTAGVEATTGPLGQGIANAVGMAIAEKTLAATFNKPGFEIVDHYTYVFVGDGCLQEGISYE 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 174 VAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKEKPSFISVRT 253
Cdd:TIGR00232 162 VASLAGHLKLGKLIVLYDSNRISIDGAVDGSFTEDVAKRFEAYGWEVLEVEDGHDLAAIDAAIEEAKASTDKPTLIEVKT 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 254 HLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEDEFFVPEEVWLYRSEKIK-KGELLEKQWQEMFQEYVKKYPQEGE 331
Cdd:TIGR00232 242 TIGFGSPnKAGTHGVHGAPLGDEEVALTKKNLGWNYNPFEIPQEVYDHFKKTVKeRGAKAEQEWNELFAAYKKKYPELAA 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 332 LLLKVFSRDWGEDYKNVLPDFR---EPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDFPK---GRNLHF 405
Cdd:TIGR00232 322 EFTRRLSGELPADWDKQLPEFKvklQALATRKYSQNVLNAIANVLPELLGGSADLAPSNLTKWKGSGDLHEnplGNYIHY 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 406 GVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLIPN 485
Cdd:TIGR00232 402 GVREFAMGAIMNGIALHGGFKPYGGTFLMFVDYARPAIRLAALMKLPVIYVYTHDSIGVGEDGPTHQPIEQLASLRAIPN 481
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 486 LFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRqkySSHWECLKGAYVLADgGEETQVVIFASGSEVHPALK 565
Cdd:TIGR00232 482 LSVWRPCDGNETAAAWKYALESQDGPTALILSRQNLPQLEE---SSLEKVLKGGYVLKD-SKGPDLILIATGSEVQLAVE 557
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 566 AKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVkKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPGEKLME 645
Cdd:TIGR00232 558 AAKKLAAENIKVRVVSMPSFDLFDKQDEEYRESVLPANV-TRLAIEAGAADEWYKYAGLVGAILGMDSFGESAPGDKLFE 636
                         650
                  ....*....|....*..
gi 2686872248 646 HFGFVGEEIARRIERWL 662
Cdd:TIGR00232 637 EFGFTVENVVAKAKKLL 653
Transketolase_N pfam00456
Transketolase, thiamine diphosphate binding domain; This family includes transketolase enzymes ...
12-335 1.24e-167

Transketolase, thiamine diphosphate binding domain; This family includes transketolase enzymes EC:2.2.1.1. and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit EC:1.2.4.4. Both these enzymes utilize thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.


Pssm-ID: 395366 [Multi-domain]  Cd Length: 334  Bit Score: 482.66  E-value: 1.24e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  12 DLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYDLD 91
Cdd:pfam00456   2 DKRAVNAIRALAMDAVEKANSGHPGAPMGMAPIAEVLFKRFLKHNPNDPKWINRDRFVLSNGHGSMLLYSLLHLTGYDLS 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  92 IEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLMEGVS 171
Cdd:pfam00456  82 MEDLKSFRQLGSKTPGHPEFGHTAGVEVTTGPLGQGIANAVGMAIAERNLAATYNRPGFDIVDHYTYVFLGDGCLMEGVS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 172 SEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKEKPSFISV 251
Cdd:pfam00456 162 SEASSLAGHLGLGNLIVFYDDNQISIDGETKISFTEDTAARFEAYGWHVIEVEDGHDVEAIAAAIEEAKAEKDKPTLIKC 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 252 RTHLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGW-PEDEFFVPEEVWLYRSEKIKKGELLEKQWQEMFQEYVKKYPQE 329
Cdd:pfam00456 242 RTVIGYGSPnKQGTHDVHGAPLGADEVAALKQKLGWdPYKPFEIPAEVYDAWKEKVAEGAKAEAEWNELFAAYKKAYPEL 321

                  ....*.
gi 2686872248 330 GELLLK 335
Cdd:pfam00456 322 AAEFAR 327
TPP_TK cd02012
Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK ...
17-281 4.36e-135

Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.


Pssm-ID: 238970 [Multi-domain]  Cd Length: 255  Bit Score: 396.49  E-value: 4.36e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  17 NTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYdLDIEDLK 96
Cdd:cd02012     1 NRIRRLSIDMVQKAGSGHPGGSLSAADILAVLYFKVLKYDPADPKWPNRDRFVLSKGHASPALYAVLALAGY-LPEEDLK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  97 QFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLsekfnkedfpIIDHYTFTLVSDGDLMEGVSSEVAQ 176
Cdd:cd02012    80 TFRQLGSRLPGHPEYGLTPGVEVTTGSLGQGLSVAVGMALAEKLL----------GFDYRVYVLLGDGELQEGSVWEAAS 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 177 LAGHWKLNKLVVIWDNNRVSIDGPTS-LAWSEDVLKRFEAFGWFVQEVeDGYDLEKLEKAIKKALEQKEKPSFISVRTHL 255
Cdd:cd02012   150 FAGHYKLDNLIAIVDSNRIQIDGPTDdILFTEDLAKKFEAFGWNVIEV-DGHDVEEILAALEEAKKSKGKPTLIIAKTIK 228
                         250       260
                  ....*....|....*....|....*..
gi 2686872248 256 AYGSP-KQDDASAHGAPLGKELVLQTK 281
Cdd:cd02012   229 GKGVPfMENTAKWHGKPLGEEEVELAK 255
Transket_pyr smart00861
Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer ...
354-522 1.08e-42

Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Hansenula polymorpha, there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates.


Pssm-ID: 214865 [Multi-domain]  Cd Length: 136  Bit Score: 150.33  E-value: 1.08e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  354 EPMATRQASGKVLNSIskviptlfggsadlsesnntylheegdfpkgrNLHFGVREHAMGTILNGMAYHGGVlPYGGTFL 433
Cdd:smart00861   1 KKIATRKAFGEALAEL--------------------------------AIDTGIAEQAMVGFAAGLALHGLR-PVVEIFF 47
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  434 VFSDYMRPSIRMAALSKlQVVYVFTHDS-IGLGEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKeGPT 512
Cdd:smart00861  48 TFFDRAKDQIRSAGASG-NVPVVFRHDGgGGVGEDGPTHHSIEDEALLRAIPGLKVVAPSDPAEAKGLLRAAIRDD-GPV 125
                          170
                   ....*....|
gi 2686872248  513 AIVLTRQKLP 522
Cdd:smart00861 126 VIRLERKSLY 135
 
Name Accession Description Interval E-value
TktA COG0021
Transketolase [Carbohydrate transport and metabolism]; Transketolase is part of the Pathway ...
9-662 0e+00

Transketolase [Carbohydrate transport and metabolism]; Transketolase is part of the Pathway/BioSystem: Pentose phosphate pathway


Pssm-ID: 439792 [Multi-domain]  Cd Length: 661  Bit Score: 1174.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248   9 TEKDLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGY 88
Cdd:COG0021     1 MPLDQLAANAIRALAMDAVQKANSGHPGLPMGMAPIAYVLWTKFLKHNPANPKWPNRDRFVLSAGHGSMLLYSLLHLTGY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  89 DLDIEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLME 168
Cdd:COG0021    81 DLSLDDLKNFRQLGSKTPGHPEYGHTPGVETTTGPLGQGIANAVGMAIAERHLAARFNRPGHDIVDHYTYVIAGDGDLME 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 169 GVSSEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKEKPSF 248
Cdd:COG0021   161 GISHEAASLAGHLKLGKLIVLYDDNGISIDGDTDLAFSEDVAKRFEAYGWHVIRVEDGHDLEAIDAAIEAAKAETDKPTL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 249 ISVRTHLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEDEFFVPEEVWLYRSEKIKKGELLEKQWQEMFQEYVKKYP 327
Cdd:COG0021   241 IICKTIIGYGSPnKQGTAKAHGAPLGAEEIAATKEALGWPPEPFEVPDEVYAHWRAAGERGAAAEAEWNERFAAYAAAYP 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 328 QEGELLLKVFSRDWGEDYKNVLPDF---REPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDF----PKG 400
Cdd:COG0021   321 ELAAELERRLAGELPEDWDAALPAFeadAKGVATRKASGKVLNALAPVLPELIGGSADLAGSNKTTIKGAGSFspedPSG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 401 RNLHFGVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSL 480
Cdd:COG0021   401 RNIHFGVREHAMGAIMNGIALHGGLRPYGGTFLVFSDYMRPAIRLAALMKLPVIYVFTHDSIGLGEDGPTHQPVEQLASL 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 481 RLIPNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRQKYSSHwECLKGAYVLADGGEETQVVIFASGSEV 560
Cdd:COG0021   481 RAIPNLDVIRPADANETAAAWKLALERKDGPTALILSRQNLPTLDRTAAAAE-GVAKGAYVLADAEGTPDVILIATGSEV 559
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 561 HPALKAKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVKKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPG 640
Cdd:COG0021   560 SLAVEAAELLAAEGIKVRVVSMPSWELFEAQDAAYRESVLPPAVRARVAVEAGVTDGWYKYVGLDGAVIGIDTFGASAPA 639
                         650       660
                  ....*....|....*....|..
gi 2686872248 641 EKLMEHFGFVGEEIARRIERWL 662
Cdd:COG0021   640 KVLFEEFGFTVENVVAAAKELL 661
PRK05899 PRK05899
transketolase; Reviewed
9-662 0e+00

transketolase; Reviewed


Pssm-ID: 235639 [Multi-domain]  Cd Length: 586  Bit Score: 928.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248   9 TEKDLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGY 88
Cdd:PRK05899    5 MELLQLLANAIRVLSIDAVQKANSGHPGMPMGAADIAYVLWTRFLRHDPKNPKWPNRDRFVLSAGHGSMLLYSLLHLAGY 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  89 DLDIEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLME 168
Cdd:PRK05899   85 DLSIDDLKNFRQLGSKTPGHPEYGHTPGVETTTGPLGQGLANAVGMALAEKYLAALFNRPGLDIVDHYTYVLCGDGDLME 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 169 GVSSEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVeDGYDLEKLEKAIKKALEQKeKPSF 248
Cdd:PRK05899  165 GISHEACSLAGHLKLGNLIVIYDDNRISIDGPTEGWFTEDVKKRFEAYGWHVIEV-DGHDVEAIDAAIEEAKAST-KPTL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 249 ISVRTHLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEdeffvpeevwlyrsekikkgellekqwqemfqeyvkkyp 327
Cdd:PRK05899  243 IIAKTIIGKGAPnKEGTHKVHGAPLGAEEIAAAKKELGWDY--------------------------------------- 283
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 328 qegelllkvfsrdwgedyknvlpdfrepmatRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDFPK----GRNL 403
Cdd:PRK05899  284 -------------------------------RKASGKALNALAKALPELVGGSADLAGSNNTKIKGSKDFAPedysGRYI 332
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 404 HFGVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLI 483
Cdd:PRK05899  333 HYGVREFAMAAIANGLALHGGFIPFGGTFLVFSDYARNAIRLAALMKLPVIYVFTHDSIGVGEDGPTHQPVEQLASLRAI 412
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 484 PNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRQKYSShwECLKGAYVLADGGeetQVVIFASGSEVHPA 563
Cdd:PRK05899  413 PNLTVIRPADANETAAAWKYALERKDGPSALVLTRQNLPVLERTAQEE--GVAKGGYVLRDDP---DVILIATGSEVHLA 487
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 564 LKAKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVKKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPGEKL 643
Cdd:PRK05899  488 LEAADELEAEGIKVRVVSMPSTELFDEQDAAYKESVLPAAVTARVAVEAGVADGWYKYVGLDGKVLGIDTFGASAPADEL 567
                         650
                  ....*....|....*....
gi 2686872248 644 MEHFGFVGEEIARRIERWL 662
Cdd:PRK05899  568 FKEFGFTVENIVAAAKELL 586
tktlase_bact TIGR00232
transketolase, bacterial and yeast; This model is designed to capture orthologs of bacterial ...
14-662 0e+00

transketolase, bacterial and yeast; This model is designed to capture orthologs of bacterial transketolases. The group includes two from the yeast Saccharomyces cerevisiae but excludes dihydroxyactetone synthases (formaldehyde transketolases) from various yeasts and the even more distant mammalian transketolases. Among the family of thiamine diphosphate-dependent enzymes that includes transketolases, dihydroxyacetone synthases, pyruvate dehydrogenase E1-beta subunits, and deoxyxylulose-5-phosphate synthases, mammalian and bacterial transketolases seem not to be orthologous. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 272974 [Multi-domain]  Cd Length: 653  Bit Score: 901.39  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  14 LLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYDLDIE 93
Cdd:TIGR00232   2 KLANAIRHLSMDAIQKAKSGHPGAPMGAAPIAEVLWTKFLKFNPTNPKWINRDRFVLSNGHGSMLLYSLLHLTGYDLSIE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  94 DLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLMEGVSSE 173
Cdd:TIGR00232  82 DLKQFRQLHSKTPGHPEYGHTAGVEATTGPLGQGIANAVGMAIAEKTLAATFNKPGFEIVDHYTYVFVGDGCLQEGISYE 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 174 VAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKEKPSFISVRT 253
Cdd:TIGR00232 162 VASLAGHLKLGKLIVLYDSNRISIDGAVDGSFTEDVAKRFEAYGWEVLEVEDGHDLAAIDAAIEEAKASTDKPTLIEVKT 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 254 HLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEDEFFVPEEVWLYRSEKIK-KGELLEKQWQEMFQEYVKKYPQEGE 331
Cdd:TIGR00232 242 TIGFGSPnKAGTHGVHGAPLGDEEVALTKKNLGWNYNPFEIPQEVYDHFKKTVKeRGAKAEQEWNELFAAYKKKYPELAA 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 332 LLLKVFSRDWGEDYKNVLPDFR---EPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDFPK---GRNLHF 405
Cdd:TIGR00232 322 EFTRRLSGELPADWDKQLPEFKvklQALATRKYSQNVLNAIANVLPELLGGSADLAPSNLTKWKGSGDLHEnplGNYIHY 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 406 GVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLIPN 485
Cdd:TIGR00232 402 GVREFAMGAIMNGIALHGGFKPYGGTFLMFVDYARPAIRLAALMKLPVIYVYTHDSIGVGEDGPTHQPIEQLASLRAIPN 481
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 486 LFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRqkySSHWECLKGAYVLADgGEETQVVIFASGSEVHPALK 565
Cdd:TIGR00232 482 LSVWRPCDGNETAAAWKYALESQDGPTALILSRQNLPQLEE---SSLEKVLKGGYVLKD-SKGPDLILIATGSEVQLAVE 557
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 566 AKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVkKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPGEKLME 645
Cdd:TIGR00232 558 AAKKLAAENIKVRVVSMPSFDLFDKQDEEYRESVLPANV-TRLAIEAGAADEWYKYAGLVGAILGMDSFGESAPGDKLFE 636
                         650
                  ....*....|....*..
gi 2686872248 646 HFGFVGEEIARRIERWL 662
Cdd:TIGR00232 637 EFGFTVENVVAKAKKLL 653
PLN02790 PLN02790
transketolase
19-659 0e+00

transketolase


Pssm-ID: 215424 [Multi-domain]  Cd Length: 654  Bit Score: 883.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  19 IRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYD-LDIEDLKQ 97
Cdd:PLN02790    1 IRFLAIDAVNKANSGHPGLPMGCAPMGHVLYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDsVQMEDLKQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  98 FRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLMEGVSSEVAQL 177
Cdd:PLN02790   81 FRQWGSRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEKHLAARFNKPDHKIVDHYTYCILGDGCQMEGISNEAASL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 178 AGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGY-DLEKLEKAIKKALEQKEKPSFISVRTHLA 256
Cdd:PLN02790  161 AGHWGLGKLIVLYDDNHISIDGDTEIAFTEDVDKRYEALGWHTIWVKNGNtDYDEIRAAIKEAKAVTDKPTLIKVTTTIG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 257 YGSP-KQDDASAHGAPLGKELVLQTKRNFGWPEDEFFVPEEVWLYRSEKIKKGELLEKQWQEMFQEYVKKYPQEGELLLK 335
Cdd:PLN02790  241 YGSPnKANSYSVHGAALGEKEVDATRKNLGWPYEPFHVPEDVKSHWSKHTKEGAALEAEWNAKFAEYKKKYPEEAAELKS 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 336 VFSRDWGEDYKNVLPDFRE---PMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDF----PKGRNLHFGVR 408
Cdd:PLN02790  321 LISGELPSGWEKALPTFTPedpADATRNLSQKCLNALAKVLPGLIGGSADLASSNMTLLKDFGDFqkdtPEERNVRFGVR 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 409 EHAMGTILNGMAYHG-GVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLIPNLF 487
Cdd:PLN02790  401 EHGMGAICNGIALHSsGLIPYCATFFVFTDYMRAAMRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASLRAMPNIL 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 488 VLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDrqkYSSHWECLKGAYVLAD--GGEETQVVIFASGSEVHPALK 565
Cdd:PLN02790  481 MLRPADGNETAGAYKVAVTNRKRPTVLALSRQKVPNLP---GTSIEGVEKGGYVISDnsSGNKPDLILIGTGSELEIAAK 557
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 566 AKQILEEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVKKRVAVEAGRGLVWHKFVGMDGLIISMEEFGKSAPGEKLME 645
Cdd:PLN02790  558 AAKELRKEGKKVRVVSMVCWELFEEQSDEYKESVLPSSVTARVSVEAGSTFGWEKYVGSKGKVIGVDRFGASAPAGILYK 637
                         650
                  ....*....|....
gi 2686872248 646 HFGFVGEEIARRIE 659
Cdd:PLN02790  638 EFGFTVENVVAAAK 651
PTZ00089 PTZ00089
transketolase; Provisional
10-660 0e+00

transketolase; Provisional


Pssm-ID: 173383 [Multi-domain]  Cd Length: 661  Bit Score: 820.46  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  10 EKDLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYD 89
Cdd:PTZ00089    4 AIDEKCANEIRCLSADLVQKANSGHPGAPMGMAPIAHILWSEVMKYNPKDPRWINRDRFVLSNGHASALLYSMLHLTGYD 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  90 LDIEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLMEG 169
Cdd:PTZ00089   84 LSMEDLKNFRQLGSRTPGHPERHITPGVEVTTGPLGQGIANAVGLAIAEKHLAAKFNRPGHPIFDNYVYVICGDGCLQEG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 170 VSSEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDG-YDLEKLEKAIKKALEQKEKPSF 248
Cdd:PTZ00089  164 VSQEALSLAGHLGLEKLIVLYDDNKITIDGNTDLSFTEDVEKKYEAYGWHVIEVDNGnTDFDGLRKAIEEAKKSKGKPKL 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 249 ISVRTHLAYGSPKQDDASAHGAPLGKELVLQTKRNFGW-PEDEFFVPEEVWLYRSEKIKKGELLEKQWQEMFQEYVKKYP 327
Cdd:PTZ00089  244 IIVKTTIGYGSSKAGTEKVHGAPLGDEDIAQVKELFGLdPEKKFHVSEEVRQFFEQHVEKKKENYEAWKKRFAKYTAAFP 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 328 QEGELLLKVFSRDWGEDYKNVLPDFR---EPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGDF----PKG 400
Cdd:PTZ00089  324 KEAQAIERRFKGELPPGWEKKLPKYTtndKAIATRKASENVLNPLFQILPELIGGSADLTPSNLTRPKEANDFtkasPEG 403
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 401 RNLHFGVREHAMGTILNGMAYHGGVLPYGGTFLVFSDYMRPSIRMAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSL 480
Cdd:PTZ00089  404 RYIRFGVREHAMCAIMNGIAAHGGFIPFGATFLNFYGYALGAVRLAALSHHPVIYVATHDSIGLGEDGPTHQPVETLALL 483
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 481 RLIPNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPlidRQKYSSHWECLKGAYVLADGGEETQVVIFASGSEV 560
Cdd:PTZ00089  484 RATPNLLVIRPADGTETSGAYALALANAKTPTILCLSRQNTP---PLPGSSIEGVLKGAYIVVDFTNSPQLILVASGSEV 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 561 HPALKAKQILeEKGIKVSVVNVFSFELFETQPEEYKRKVLMRNVKKRVAVEAGRGLVWHKFVGMDgliISMEEFGKSAPG 640
Cdd:PTZ00089  561 SLCVEAAKAL-SKELNVRVVSMPCWELFDQQSEEYQQSVLPSGGVPVLSVEAYVSFGWEKYSHVH---VGISGFGASAPA 636
                         650       660
                  ....*....|....*....|
gi 2686872248 641 EKLMEHFGFVGEEIARRIER 660
Cdd:PTZ00089  637 NALYKHFGFTVENVVEKARA 656
Transketolase_N pfam00456
Transketolase, thiamine diphosphate binding domain; This family includes transketolase enzymes ...
12-335 1.24e-167

Transketolase, thiamine diphosphate binding domain; This family includes transketolase enzymes EC:2.2.1.1. and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit EC:1.2.4.4. Both these enzymes utilize thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.


Pssm-ID: 395366 [Multi-domain]  Cd Length: 334  Bit Score: 482.66  E-value: 1.24e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  12 DLLLINTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYDLD 91
Cdd:pfam00456   2 DKRAVNAIRALAMDAVEKANSGHPGAPMGMAPIAEVLFKRFLKHNPNDPKWINRDRFVLSNGHGSMLLYSLLHLTGYDLS 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  92 IEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLSEKFNKEDFPIIDHYTFTLVSDGDLMEGVS 171
Cdd:pfam00456  82 MEDLKSFRQLGSKTPGHPEFGHTAGVEVTTGPLGQGIANAVGMAIAERNLAATYNRPGFDIVDHYTYVFLGDGCLMEGVS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 172 SEVAQLAGHWKLNKLVVIWDNNRVSIDGPTSLAWSEDVLKRFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKEKPSFISV 251
Cdd:pfam00456 162 SEASSLAGHLGLGNLIVFYDDNQISIDGETKISFTEDTAARFEAYGWHVIEVEDGHDVEAIAAAIEEAKAEKDKPTLIKC 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 252 RTHLAYGSP-KQDDASAHGAPLGKELVLQTKRNFGW-PEDEFFVPEEVWLYRSEKIKKGELLEKQWQEMFQEYVKKYPQE 329
Cdd:pfam00456 242 RTVIGYGSPnKQGTHDVHGAPLGADEVAALKQKLGWdPYKPFEIPAEVYDAWKEKVAEGAKAEAEWNELFAAYKKAYPEL 321

                  ....*.
gi 2686872248 330 GELLLK 335
Cdd:pfam00456 322 AAEFAR 327
TPP_TK cd02012
Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK ...
17-281 4.36e-135

Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.


Pssm-ID: 238970 [Multi-domain]  Cd Length: 255  Bit Score: 396.49  E-value: 4.36e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  17 NTIRFLSVDQVERAKSGHPGMPLGASHIAYLIYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLLFVMGYdLDIEDLK 96
Cdd:cd02012     1 NRIRRLSIDMVQKAGSGHPGGSLSAADILAVLYFKVLKYDPADPKWPNRDRFVLSKGHASPALYAVLALAGY-LPEEDLK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  97 QFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAERFLsekfnkedfpIIDHYTFTLVSDGDLMEGVSSEVAQ 176
Cdd:cd02012    80 TFRQLGSRLPGHPEYGLTPGVEVTTGSLGQGLSVAVGMALAEKLL----------GFDYRVYVLLGDGELQEGSVWEAAS 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 177 LAGHWKLNKLVVIWDNNRVSIDGPTS-LAWSEDVLKRFEAFGWFVQEVeDGYDLEKLEKAIKKALEQKEKPSFISVRTHL 255
Cdd:cd02012   150 FAGHYKLDNLIAIVDSNRIQIDGPTDdILFTEDLAKKFEAFGWNVIEV-DGHDVEEILAALEEAKKSKGKPTLIIAKTIK 228
                         250       260
                  ....*....|....*....|....*..
gi 2686872248 256 AYGSP-KQDDASAHGAPLGKELVLQTK 281
Cdd:cd02012   229 GKGVPfMENTAKWHGKPLGEEEVELAK 255
TktA1 COG3959
Transketolase, N-terminal subunit [Carbohydrate transport and metabolism];
6-275 1.80e-78

Transketolase, N-terminal subunit [Carbohydrate transport and metabolism];


Pssm-ID: 443159 [Multi-domain]  Cd Length: 277  Bit Score: 251.15  E-value: 1.80e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248   6 RKATEKDLLLI-NTIRFLSVDQVERAKSGHPGMPLGASHI-AYLiYDRFLRFNPKNPNWINRDRFVLSAGHASAMLYSLL 83
Cdd:COG3959     1 TKEDIKELEEKaRQIRRDILRMIYAAGSGHPGGSLSAADIlAAL-YFKVMNIDPKNPDWPDRDRFILSKGHAAPALYAVL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  84 FVMGYdLDIEDLKQFRQLNSKTPGHPESFLTPGVEATTGPLGQGIGNAVGMALAerflsEKFNKEdfpiiDHYTFTLVSD 163
Cdd:COG3959    80 AEKGY-FPKEELATFRKLGSRLQGHPDMKKTPGVEMSTGSLGQGLSVAVGMALA-----AKLDGK-----DYRVYVLLGD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 164 GDLMEGVSSEVAQLAGHWKLNKLVVIWDNNRVSIDGPTslawsEDVL------KRFEAFGWFVQEVeDGYDLEKLEKAIK 237
Cdd:COG3959   149 GELQEGQVWEAAMAAAHYKLDNLIAIVDRNGLQIDGPT-----EDVMsleplaEKWEAFGWHVIEV-DGHDIEALLAALD 222
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 2686872248 238 KALEQKEKPSFISVRTHLAYGSPK-QDDASAHGAPLGKE 275
Cdd:COG3959   223 EAKAVKGKPTVIIAHTVKGKGVSFmENRPKWHGKAPNDE 261
TPP_PYR_DXS_TK_like cd07033
Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), ...
360-518 7.45e-67

Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins; Thiamine pyrophosphate (TPP) family, pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and the beta subunits of the E1 component of the human pyruvate dehydrogenase complex (E1- PDHc), subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Like many TPP-dependent enzymes DXS and TK are homodimers having a PYR and a PP domain on the same subunit. TK has two active sites per dimer which lie between PYR and PP domains of different subunits. For DXS each active site is located at the interface of a PYR and a PP domain from the same subunit. E1-PDHc is an alpha2beta2 dimer-of-heterodimers having two active sites but having the PYR and PP domains arranged on separate subunits, the PYR domains on the beta subunits, the PP domains on the alpha subunits. DXS is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis, it catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. TK also plays a central role in the Calvin cycle in plants. PDHc catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. This subfamily includes the beta subunits of the E1 component of the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). ADC participates in the breakdown of acetoin. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate during the breakdown of branched chain amino acids.


Pssm-ID: 132916 [Multi-domain]  Cd Length: 156  Bit Score: 216.15  E-value: 7.45e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 360 QASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGdFPkGRNLHFGVREHAMGTILNGMAYHGgVLPYGGTFLVFSDYM 439
Cdd:cd07033     1 KAFGEALLELAKKDPRIVALSADLGGSTGLDKFAKK-FP-DRFIDVGIAEQNMVGIAAGLALHG-LKPFVSTFSFFLQRA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 440 RPSIR-MAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKeGPTAIVLTR 518
Cdd:cd07033    78 YDQIRhDVALQNLPVKFVGTHAGISVGEDGPTHQGIEDIALLRAIPNMTVLRPADANETAAALEAALEYD-GPVYIRLPR 156
Transket_pyr pfam02779
Transketolase, pyrimidine binding domain; This family includes transketolase enzymes, pyruvate ...
354-522 1.58e-64

Transketolase, pyrimidine binding domain; This family includes transketolase enzymes, pyruvate dehydrogenases, and branched chain alpha-keto acid decarboxylases.


Pssm-ID: 460692 [Multi-domain]  Cd Length: 174  Bit Score: 210.48  E-value: 1.58e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 354 EPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEGD-FPKGRNLHFGVREHAMGTILNGMAYHGGVL-PYGGT 431
Cdd:pfam02779   1 KKIATRKASGEALAELAKRDPRVVGGGADLAGGTFTVTKGLLHpQGAGRVIDTGIAEQAMVGFANGMALHGPLLpPVEAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 432 FLVFSDYMRPSIR-MAALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKE- 509
Cdd:pfam02779  81 FSDFLNRADDAIRhGAALGKLPVPFVVTRDPIGVGEDGPTHQSVEDLAFLRAIPGLKVVRPSDAAETKGLLRAAIRRDGr 160
                         170
                  ....*....|...
gi 2686872248 510 GPTAIVLTRQKLP 522
Cdd:pfam02779 161 KPVVLRLPRQLLR 173
Transket_pyr smart00861
Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer ...
354-522 1.08e-42

Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Hansenula polymorpha, there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates.


Pssm-ID: 214865 [Multi-domain]  Cd Length: 136  Bit Score: 150.33  E-value: 1.08e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  354 EPMATRQASGKVLNSIskviptlfggsadlsesnntylheegdfpkgrNLHFGVREHAMGTILNGMAYHGGVlPYGGTFL 433
Cdd:smart00861   1 KKIATRKAFGEALAEL--------------------------------AIDTGIAEQAMVGFAAGLALHGLR-PVVEIFF 47
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  434 VFSDYMRPSIRMAALSKlQVVYVFTHDS-IGLGEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKeGPT 512
Cdd:smart00861  48 TFFDRAKDQIRSAGASG-NVPVVFRHDGgGGVGEDGPTHHSIEDEALLRAIPGLKVVAPSDPAEAKGLLRAAIRDD-GPV 125
                          170
                   ....*....|
gi 2686872248  513 AIVLTRQKLP 522
Cdd:smart00861 126 VIRLERKSLY 135
TktA2 COG3958
Transketolase, C-terminal subunit [Carbohydrate transport and metabolism];
354-662 1.66e-41

Transketolase, C-terminal subunit [Carbohydrate transport and metabolism];


Pssm-ID: 443158 [Multi-domain]  Cd Length: 308  Bit Score: 152.93  E-value: 1.66e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 354 EPMATRQASGKVLNSISKVIPTLFGGSADLSESNNTYLHEEgDFPkGRNLHFGVREHAMGTILNGMAyHGGVLPYGGTFL 433
Cdd:COG3958     2 EKKAMRDAFGEALVELAEEDPDIVVLDADLGGSTKLDKFAK-AFP-DRFFNVGIAEQNMVGVAAGLA-LAGKIPFVSTFA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 434 VFSdYMRPS--IRMA-ALSKLQVVYVFTHDSIGLGEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKeG 510
Cdd:COG3958    79 PFL-TGRAYeqIRNDiAYPNLNVKIVGSHAGLSYGEDGATHQALEDIALMRALPNMTVIVPADAVETEAAVRAAAEHD-G 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 511 PTAIVLTRQKLPLIDRQKYSshWEcLKGAYVLADGGEetqVVIFASGSEVHPALKAKQILEEKGIKVSVVNVFSF----- 585
Cdd:COG3958   157 PVYLRLGRGAVPVVYDEDYE--FE-IGKARVLREGKD---VTIIATGIMVAEALEAAELLAKEGISARVINMHTIkplde 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 586 ELFETQPEEYKR------------------KVLMRNVKKRVaveagrglvwhKFVGMDgliismEEFGKSAPGEKLMEHF 647
Cdd:COG3958   231 EAILKAARKTGAvvtaeehsiigglgsavaEVLAENYPVPL-----------RRIGVP------DRFGESGSPEELLEKY 293
                         330
                  ....*....|....*
gi 2686872248 648 GFVGEEIARRIERWL 662
Cdd:COG3958   294 GLDAEGIVAAAKELL 308
Dxs COG1154
Deoxyxylulose-5-phosphate synthase [Coenzyme transport and metabolism, Lipid transport and ...
447-581 5.85e-15

Deoxyxylulose-5-phosphate synthase [Coenzyme transport and metabolism, Lipid transport and metabolism]; Deoxyxylulose-5-phosphate synthase is part of the Pathway/BioSystem: Pyridoxal phosphate biosynthesis


Pssm-ID: 440768 [Multi-domain]  Cd Length: 623  Bit Score: 78.13  E-value: 5.85e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 447 ALSKLQVVyvFTHDSIGL-GEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVS--VAWQIAIerkEGPTAIVLTRQKLPL 523
Cdd:COG1154   406 ALQNLPVT--FAIDRAGLvGADGPTHHGVFDLSYLRCIPNMVIMAPKDENELRhmLYTALAY---DGPTAIRYPRGNGPG 480
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2686872248 524 IDRQKYSSHWEcLKGAYVLADGGEetqVVIFASGSEVHPALKAKQILEEKGIKVSVVN 581
Cdd:COG1154   481 VELPAELEPLP-IGKGEVLREGKD---VAILAFGTMVAEALEAAERLAAEGISATVVD 534
PRK05444 PRK05444
1-deoxy-D-xylulose-5-phosphate synthase; Provisional
128-581 3.00e-13

1-deoxy-D-xylulose-5-phosphate synthase; Provisional


Pssm-ID: 235470 [Multi-domain]  Cd Length: 580  Bit Score: 72.81  E-value: 3.00e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 128 IGNAVGMALAERFLSEKfnkedfpiiDHYTFTLVSDGDLMEGVSSEVAQLAGHWKLNKLVVIWDNNRvSIDGPT-SLAws 206
Cdd:PRK05444  123 ISAALGMAKARDLKGGE---------DRKVVAVIGDGALTGGMAFEALNNAGDLKSDLIVILNDNEM-SISPNVgALS-- 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 207 eDVLKR------FEAFGWFVQEVEDGYDLEKLEKAIKKALEQKeKPSFISVRTH--LAYGSPKQDDASAHGAPLgkelvl 278
Cdd:PRK05444  191 -NYLARlrsstlFEELGFNYIGPIDGHDLDALIETLKNAKDLK-GPVLLHVVTKkgKGYAPAEADPIKYHGVGK------ 262
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 279 qtkrnfgwpedefFVPEEvwlyrSEKIKKGELLEKQWQEMFqeyvkkypqeGELLLKVFSRDwgedyKNVL---Pdfrep 355
Cdd:PRK05444  263 -------------FDPET-----GEQPKSSKPGKPSYTKVF----------GETLCELAEKD-----PKIVaitA----- 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 356 mATRQASGkvLNSISKviptlfggsadlsesnntylheegDFPKgrnlHF---GVRE-HAMgTILNGMAYHGG--VLPYG 429
Cdd:PRK05444  305 -AMPEGTG--LVKFSK------------------------RFPD----RYfdvGIAEqHAV-TFAAGLATEGLkpVVAIY 352
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 430 GTFL------VFSDymrpsirmAALSKLQVVYVFthDSIGL-GEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVS--VA 500
Cdd:PRK05444  353 STFLqraydqVIHD--------VALQNLPVTFAI--DRAGLvGADGPTHQGAFDLSYLRCIPNMVIMAPSDENELRqmLY 422
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 501 WqiAIERKEGPTAIVLTRQKLPLIDRQKYSSH----WECLKgayvladggEETQVVIFASGSEVHPALKAKQILEEkgik 576
Cdd:PRK05444  423 T--ALAYDDGPIAIRYPRGNGVGVELPELEPLpigkGEVLR---------EGEDVAILAFGTMLAEALKAAERLAS---- 487

                  ....*
gi 2686872248 577 VSVVN 581
Cdd:PRK05444  488 ATVVD 492
TPP_enzymes cd00568
Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic ...
65-253 1.02e-12

Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and the branched chain alpha-keto acid dehydrogenase complexes.


Pssm-ID: 238318 [Multi-domain]  Cd Length: 168  Bit Score: 66.51  E-value: 1.02e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  65 RDRFVLSAGHASAMLYSLLFvmgydldiedlkqfrqlnsktPGHPESFLTPGveaTTGPLGQGIGNAVGMALAERflsek 144
Cdd:cd00568    13 DAIVVNDAGNSAYWAYRYLP---------------------LRRGRRFLTST---GFGAMGYGLPAAIGAALAAP----- 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 145 fnkedfpiiDHYTFTLVSDGDLMEGVsSEVAqLAGHWKLNKLVVIWDNN----------RVSIDGPTSLAWSE-DVLKRF 213
Cdd:cd00568    64 ---------DRPVVCIAGDGGFMMTG-QELA-TAVRYGLPVIVVVFNNGgygtirmhqeAFYGGRVSGTDLSNpDFAALA 132
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2686872248 214 EAFGWFVQEVEdgyDLEKLEKAIKKALEQKeKPSFISVRT 253
Cdd:cd00568   133 EAYGAKGVRVE---DPEDLEAALAEALAAG-GPALIEVKT 168
Transketolase_C pfam02780
Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as ...
547-654 3.92e-12

Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a regulatory molecule binding site.


Pssm-ID: 460693 [Multi-domain]  Cd Length: 124  Bit Score: 63.77  E-value: 3.92e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 547 EETQVVIFASGSEVHPALKAKQILEEKGIKVSVVNVFSFELFETQP-----EEYKRKVLMRNVKKRVAVEAGRGLVW--H 619
Cdd:pfam02780   8 EGDDVTIVAYGSMVEEALEAAELLAKEGISAEVVDLRTIKPLDKETilesvKKTGRLVTVEEAVPRGGFGSEVAAALaeE 87
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2686872248 620 KFVGMDGLIISM--EEFGKSAPGEKLMEHFGFVGEEI 654
Cdd:pfam02780  88 AFDGLDAPVLRVggPDFPEPGSADELEKLYGLTPEKI 124
dxs TIGR00204
1-deoxy-D-xylulose-5-phosphate synthase; DXP synthase is a thiamine diphosphate-dependent ...
13-581 9.89e-12

1-deoxy-D-xylulose-5-phosphate synthase; DXP synthase is a thiamine diphosphate-dependent enzyme related to transketolase and the pyruvate dehydrogenase E1-beta subunit. By an acyloin condensation of pyruvate with glyceraldehyde 3-phosphate, it produces 1-deoxy-D-xylulose 5-phosphate, a precursor of thiamine diphosphate (TPP), pyridoxal phosphate, and the isoprenoid building block isopentenyl diphosphate (IPP). [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridoxine, Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]


Pssm-ID: 129308 [Multi-domain]  Cd Length: 617  Bit Score: 67.88  E-value: 9.89e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  13 LLLINT---IRFLSVDQVER--------------AKSGHPGMPLGASHIAYLIYDRFlrfnpKNPnwinRDRFVLSAGHA 75
Cdd:TIGR00204   1 LSLINSpqeLRLLSIDELEKlcdelrryllesvsASGGHLASGLGTVELTVALHYVF-----NTP----KDQFIWDVGHQ 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  76 SamlYSLLFVMGYDLDIEDLKQFRQLnSKTPGHPES---FLTPGVEATTgplgqgIGNAVGMALAerflSEKFNKedfpi 152
Cdd:TIGR00204  72 A---YPHKLLTGRREKFSTLRQKKGL-HGFPKRSESeydVFSAGHSSTS------ISAGLGIAVA----AEKKGA----- 132
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 153 iDHYTFTLVSDGDLMEGVSSEVAQLAGHWKlNKLVVIWDNNRVSIDGPTSlAWSEDVLKRFEafGWFVQEVEDGydLEKL 232
Cdd:TIGR00204 133 -DRKTVCVIGDGAITAGMAFEALNHAGDLK-TDMIVILNDNEMSISENVG-ALSNHLAQLRS--GSLYQSLRDG--LKKI 205
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 233 EK---AIKKALEQKEKPSFISVrthLAYGSPKQDDASAHGAPLGKELVLQTKRNFGWPEDeffVPEEVWLYRSEKIKKGE 309
Cdd:TIGR00204 206 FSklpPIKNYLAKRTEESMKGL---VVPGTFFEELGFNYIGPVDGHDLLELIETLKNAKK---LKGPVFLHIQTKKGKGY 279
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 310 LLEKQWQEMFQEYVKKYPQEGELllkVFSRDWGEDYKNVLPDFREPMATRQasgkvlNSISKVIPTLFGGSA--DLSESn 387
Cdd:TIGR00204 280 KPAEKDPIGWHGVGPFDLSTGCL---PKSKSALPSYSKIFSDTLCELAKKD------NKIVGITPAMPEGSGldKFSRK- 349
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 388 ntylheegdFPKgRNLHFGVREHAMGTILNGMAYhGGVLPYggtFLVFSDYMRPS----IRMAALSKLQVVyvFTHDSIG 463
Cdd:TIGR00204 350 ---------FPD-RYFDVAIAEQHAVTFAAGMAI-EGYKPF---VAIYSTFLQRAydqvVHDVCIQKLPVL--FAIDRAG 413
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 464 L-GEDGPTHQPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRQKYSSHWECLKGAyVL 542
Cdd:TIGR00204 414 IvGADGETHQGAFDISYLRCIPNMVIMAPSDENELRQMLYTGYHYDDGPIAVRYPRGNAVGVELTPEPEKLPIGKSE-VL 492
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 2686872248 543 ADGGEetqVVIFASGSEVHPALKAKQILEEKGIKVSVVN 581
Cdd:TIGR00204 493 RKGEK---ILILGFGTLVPEALEVAESLNEKGIEATVVD 528
TPP_E1_PDC_ADC_BCADC cd02000
Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; ...
106-267 1.77e-10

Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).


Pssm-ID: 238958 [Multi-domain]  Cd Length: 293  Bit Score: 62.51  E-value: 1.77e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 106 PGHPeSFLTPGVEATTGPLGQGIGNAVGMALAErflseKFNKEDfpiidHYTFTLVSDGDLMEGVSSEVAQLAGHWKLNK 185
Cdd:cd02000    89 SMHI-GDKEKNFFGGNGIVGGQVPLAAGAALAL-----KYRGED-----RVAVCFFGDGATNEGDFHEALNFAALWKLPV 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 186 LVVIWdNNRVSIDGPTSLA-WSEDVLKRFEAFGWFVQEVeDGYDLEKLEKAIKKALE---QKEKPSFISVRTHLAYGSPK 261
Cdd:cd02000   158 IFVCE-NNGYAISTPTSRQtAGTSIADRAAAYGIPGIRV-DGNDVLAVYEAAKEAVErarAGGGPTLIEAVTYRLGGHST 235

                  ....*.
gi 2686872248 262 QDDASA 267
Cdd:cd02000   236 SDDPSR 241
PRK12571 PRK12571
1-deoxy-D-xylulose-5-phosphate synthase; Provisional
397-581 2.64e-10

1-deoxy-D-xylulose-5-phosphate synthase; Provisional


Pssm-ID: 183601 [Multi-domain]  Cd Length: 641  Bit Score: 63.59  E-value: 2.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 397 FPKgRNLHFGVREHAMGTILNGMAyHGGVLPYggtFLVFSDYMRPS----IRMAALSKLQVVYVFthDSIGL-GEDGPTH 471
Cdd:PRK12571  359 FPN-RVFDVGIAEQHAVTFAAGLA-AAGLKPF---CAVYSTFLQRGydqlLHDVALQNLPVRFVL--DRAGLvGADGATH 431
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 472 QPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKEGPTAIVLTRQKLPLIDRQKYSShwecLKGAYVLADGGEETQV 551
Cdd:PRK12571  432 AGAFDLAFLTNLPNMTVMAPRDEAELRHMLRTAAAHDDGPIAVRFPRGEGVGVEIPAEGT----ILGIGKGRVPREGPDV 507
                         170       180       190
                  ....*....|....*....|....*....|
gi 2686872248 552 VIFASGSEVHPALKAKQILEEKGIKVSVVN 581
Cdd:PRK12571  508 AILSVGAHLHECLDAADLLEAEGISVTVAD 537
TPP_E1_EcPDC_like cd02017
Thiamine pyrophosphate (TPP) family, E1 of E. coli PDC-like subfamily, TPP-binding module; ...
33-232 5.06e-10

Thiamine pyrophosphate (TPP) family, E1 of E. coli PDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the Escherichia coli pyruvate dehydrogenase multienzyme complex (PDC). PDC catalyzes the oxidative decarboxylation of pyruvate and the subsequent acetylation of coenzyme A to acetyl-CoA. The E1 component of PDC catalyzes the first step of the multistep process, using TPP and a divalent cation as cofactors. E. coli PDC is a homodimeric enzyme.


Pssm-ID: 238975 [Multi-domain]  Cd Length: 386  Bit Score: 61.94  E-value: 5.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248  33 GHPGMPLGASHIAYLIYDRFLRfnPKNpNWINRDRfVLSAGHASAMLYSLLFVMGyDLDIEDLKQFRQLNSKT--PGHPE 110
Cdd:cd02017    31 GHIATFASAATLYEVGFNHFFR--ARG-EGGGGDL-VYFQGHASPGIYARAFLEG-RLTEEQLDNFRQEVGGGglSSYPH 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 111 SFLTPG-VEATTGPLGQGIGNAVGMALAERFLSEKFNKEDfpiIDHYTFTLVSDGDLMEGVSSEVAQLAGHWKLNKLVVI 189
Cdd:cd02017   106 PWLMPDfWEFPTVSMGLGPIQAIYQARFNRYLEDRGLKDT---SDQKVWAFLGDGEMDEPESLGAIGLAAREKLDNLIFV 182
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2686872248 190 WDNNRVSIDGP---TSLAWSEdvLKR-FEAFGWFVQEVEDGYDLEKL 232
Cdd:cd02017   183 VNCNLQRLDGPvrgNGKIIQE--LEGiFRGAGWNVIKVIWGSKWDEL 227
TPP_BFDC cd02002
Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins ...
105-253 6.75e-09

Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC). P. putida BFDC plays a role in the mandelate pathway, catalyzing the conversion of benzoylformate to benzaldehyde and carbon dioxide. This enzyme is dependent on TPP and a divalent metal cation as cofactors.


Pssm-ID: 238960 [Multi-domain]  Cd Length: 178  Bit Score: 55.68  E-value: 6.75e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 105 TPGHPESFLTPgveaTTGPLGQGIGNAVGMALAERflsekfnkedfpiiDHYTFTLVSDGDLMEGVSSevAQLAGHWKLN 184
Cdd:cd02002    36 PLTRPGSYFTL----RGGGLGWGLPAAVGAALANP--------------DRKVVAIIGDGSFMYTIQA--LWTAARYGLP 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 185 KLVVIWDNN----------RVSIDGPTSLAWseDVLKRF----------EAFGWFVQEVEDGydlEKLEKAIKKALEQKe 244
Cdd:cd02002    96 VTVVILNNRgygalrsflkRVGPEGPGENAP--DGLDLLdpgidfaaiaKAFGVEAERVETP---EELDEALREALAEG- 169

                  ....*....
gi 2686872248 245 KPSFISVRT 253
Cdd:cd02002   170 GPALIEVVV 178
PRK12315 PRK12315
1-deoxy-D-xylulose-5-phosphate synthase; Provisional
128-584 8.17e-07

1-deoxy-D-xylulose-5-phosphate synthase; Provisional


Pssm-ID: 237053 [Multi-domain]  Cd Length: 581  Bit Score: 52.32  E-value: 8.17e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 128 IGNAVGMALAERFLSEKFNkedfpIIdhytfTLVSDGDLMEGVSSEVAQLAGHWKLNkLVVIWDNNRVSIDGP-----TS 202
Cdd:PRK12315  119 IALATGLAKARDLKGEKGN-----II-----AVIGDGSLSGGLALEGLNNAAELKSN-LIIIVNDNQMSIAENhgglyKN 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 203 LA-------WSEDVLkrFEAFGWFVQEVEDGYDLEKLEKAIKKaLEQKEKPsfISVRTHLAYGSpkqddasahgaplGKE 275
Cdd:PRK12315  188 LKelrdtngQSENNL--FKAMGLDYRYVEDGNDIESLIEAFKE-VKDIDHP--IVLHIHTLKGK-------------GYQ 249
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 276 LVLQTKRNFGW--PEDeffvpeevwlyrsekIKKGELLEKqwqemfqeyvkkypqegelllkvfsrDWGEDYKNVLPDFr 353
Cdd:PRK12315  250 PAEENKEAFHWhmPFD---------------LETGQSKVP--------------------------ASGESYSSVTLDY- 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 354 epMATRQASGKVLNSISKVIPTLFGgsadLSESNNTYlheegdfpkGRNLH-FGVREHAMGTILNGMAYHGG--VLPYGG 430
Cdd:PRK12315  288 --LLKKIKEGKPVVAINAAIPGVFG----LKEFRKKY---------PDQYVdVGIAEQESVAFASGIAANGArpVIFVNS 352
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 431 TFLVFSdYMRPSIRMAaLSKLQVVYVFTHDSIGlGEDgPTHQPVEQLSSLRLIPNLFVLRPADANEVSVAWQIAIERKEG 510
Cdd:PRK12315  353 TFLQRA-YDQLSHDLA-INNNPAVMIVFGGSIS-GND-VTHLGIFDIPMISNIPNLVYLAPTTKEELIAMLEWALTQHEH 428
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2686872248 511 PTAIVLTRQKLPL--IDRQKYSshweclKGAYVLADGGEEtqVVIFASGSEVHPALKAKQILEEK-GIKVSVVNVFS 584
Cdd:PRK12315  429 PVAIRVPEHGVESgpTVDTDYS------TLKYEVTKAGEK--VAILALGDFYELGEKVAKKLKEElGIDATLINPKF 497
TPP_DXS cd02007
Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; ...
120-253 2.92e-06

Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).


Pssm-ID: 238965 [Multi-domain]  Cd Length: 195  Bit Score: 48.31  E-value: 2.92e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 120 TTGPLGQGIGNAVGMALAERFLSEKFNKedFPIIDhytftlvsDGDLMEGVSSEVAQLAGHWKlNKLVVIWDNNRVSIDG 199
Cdd:cd02007    73 GTGHSSTSISAALGMAVARDLKGKKRKV--IAVIG--------DGALTGGMAFEALNNAGYLK-SNMIVILNDNEMSISP 141
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2686872248 200 PTSlawSEDVLkrFEAFGWFVQEVEDGYDLEKLEKAIKKALEQKeKPSFISVRT 253
Cdd:cd02007   142 NVG---TPGNL--FEELGFRYIGPVDGHNIEALIKVLKEVKDLK-GPVLLHVVT 189
PLN02582 PLN02582
1-deoxy-D-xylulose-5-phosphate synthase
397-581 2.51e-05

1-deoxy-D-xylulose-5-phosphate synthase


Pssm-ID: 178194 [Multi-domain]  Cd Length: 677  Bit Score: 47.59  E-value: 2.51e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 397 FPKgRNLHFGVREHAMGTILNGMAYHGgVLPYGGtflVFSDYM-RPSIRMAALSKLQVVYV-FTHDSIGL-GEDGPTHQP 473
Cdd:PLN02582  396 FPT-RCFDVGIAEQHAVTFAAGLACEG-LKPFCA---IYSSFLqRGYDQVVHDVDLQKLPVrFAMDRAGLvGADGPTHCG 470
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 474 VEQLSSLRLIPNLFVLRPADANEV--SVAWQIAIERKegPTAIVLTRQK---LPLIDRQKySSHWECLKGAYVLadggEE 548
Cdd:PLN02582  471 AFDVTYMACLPNMVVMAPSDEAELfhMVATAAAIDDR--PSCFRYPRGNgigVQLPPNNK-GIPIEVGKGRILL----EG 543
                         170       180       190
                  ....*....|....*....|....*....|...
gi 2686872248 549 TQVVIFASGSEVHPALKAKQILEEKGIKVSVVN 581
Cdd:PLN02582  544 ERVALLGYGTAVQSCLAAASLLERHGLSATVAD 576
TPP_enzyme_C pfam02775
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;
109-251 6.20e-05

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;


Pssm-ID: 460689 [Multi-domain]  Cd Length: 151  Bit Score: 43.73  E-value: 6.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 109 PESFLTPGVeatTGPLGQGIGNAVGMALAERflsekfnkeDFPIIDhytftLVSDGDLMeGVSSEVAQLAGHwKLNKLVV 188
Cdd:pfam02775  18 PRRYLTSGG---LGTMGYGLPAAIGAKLARP---------DRPVVA-----IAGDGGFQ-MNLQELATAVRY-NLPITVV 78
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2686872248 189 IWDNN----------------RVSIDGPTSLAWseDVLKRFEAFGWFVQEVEDGydlEKLEKAIKKALEQKeKPSFISV 251
Cdd:pfam02775  79 VLNNGgygmtrgqqtpfgggrYSGPSGKILPPV--DFAKLAEAYGAKGARVESP---EELEEALKEALEHD-GPALIDV 151
PLN02374 PLN02374
pyruvate dehydrogenase (acetyl-transferring)
124-254 6.46e-04

pyruvate dehydrogenase (acetyl-transferring)


Pssm-ID: 215213 [Multi-domain]  Cd Length: 433  Bit Score: 42.62  E-value: 6.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2686872248 124 LGQGIGNAVGMALAERFLSEKFNKEDfpiIDHYTFTLVSDGDLMEGVSSEVAQLAGHWKLNKLVVIwDNNRVSIdGPTSL 203
Cdd:PLN02374  196 IGEGIPVATGAAFSSKYRREVLKEES---CDDVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV-ENNLWAI-GMSHL 270
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2686872248 204 AWSED--VLKRFEAFGWFVQEVeDGYDLEKLEKAIKKALEQK---EKPSFISVRTH 254
Cdd:PLN02374  271 RATSDpeIWKKGPAFGMPGVHV-DGMDVLKVREVAKEAIERArrgEGPTLVECETY 325
PRK13012 PRK13012
2-oxoacid dehydrogenase subunit E1; Provisional
536-587 1.01e-03

2-oxoacid dehydrogenase subunit E1; Provisional


Pssm-ID: 237267 [Multi-domain]  Cd Length: 896  Bit Score: 42.23  E-value: 1.01e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2686872248 536 LKGAYVLADGGEETQVVIFASGSEVHPALKAKQILEEK-GIKVSVVNVFSF-EL 587
Cdd:PRK13012  720 LKGMYRLAAAAEAPRVQLLGSGAILREVLAAARLLADDwGVDADVWSVTSFtEL 773
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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