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Conserved domains on  [gi|2675117015|gb|WVW00561|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Xenogryllus lamottei]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-309 1.27e-134

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 384.12  E-value: 1.27e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   5 ILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSL 84
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  85 FLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGG 164
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 165 FGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSM 244
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2675117015 245 VIFFGGDLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFFWVVWFI 309
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-309 1.27e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 384.12  E-value: 1.27e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   5 ILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSL 84
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  85 FLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGG 164
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 165 FGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSM 244
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2675117015 245 VIFFGGDLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFFWVVWFI 309
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
10-296 4.30e-89

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 268.19  E-value: 4.30e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  10 MMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSLFLSLL 89
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  90 IWMIYPLGYELISFDL--ALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGGFGL 167
Cdd:pfam00146  81 AFAVIPFGPGLVLADLnvGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 168 NLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSMVIF 247
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2675117015 248 FGGDLF------SLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL 296
Cdd:pfam00146 241 LGGWLGpfplpgLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-308 1.58e-83

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 255.05  E-value: 1.58e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   4 WILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVS 83
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  84 LFLSLLIWMIYPLGYELISFDL--ALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVM 161
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLnvGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 162 VGGFGLNLFLIYQE-YIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMS 240
Cdd:COG1005   168 AGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 241 MLSMVIFFGG-----DLFSLYFYFGFV-------FISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL-NYFMCFFWVVW 307
Cdd:COG1005   248 ALATTLFLGGwlgpfPILPLGGLPGILwfllktlFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVLTAAVVLL 327


                  .
gi 2675117015 308 F 308
Cdd:COG1005   328 F 328
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
14-296 8.79e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 157.94  E-value: 8.79e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  14 LLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSLFLSLLIWMI 93
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  94 YPLGYELI----------SFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVG 163
Cdd:NF040610   99 IPFGAVIIngveyplvvtNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 164 GFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLS 243
Cdd:NF040610  179 SLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2675117015 244 MVIFFGG---------------DLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL 296
Cdd:NF040610  259 VLLFLGGwnlpgfvtdipvlgiILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-309 1.27e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 384.12  E-value: 1.27e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   5 ILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSL 84
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  85 FLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGG 164
Cdd:MTH00193   82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 165 FGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSM 244
Cdd:MTH00193  162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2675117015 245 VIFFGGDLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFFWVVWFI 309
Cdd:MTH00193  242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 5-299 2.72e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 337.39  E-value: 2.72e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   5 ILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSL 84
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  85 FLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGG 164
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 165 FGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSM 244
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117015 245 VIFFGG--DLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYF 299
Cdd:MTH00225  241 ILFFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYL 297
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 5-303 1.16e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 333.38  E-value: 1.16e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   5 ILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSL 84
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  85 FLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGG 164
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 165 FGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSM 244
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2675117015 245 VIFFGGD-----LFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFF 303
Cdd:MTH00143  241 VLFFGGSsvlflLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFV 304
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-301 6.31e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 319.53  E-value: 6.31e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   1 MLSWILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCP 80
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  81 IVSLFLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIV 160
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 161 MVGGFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMS 240
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2675117015 241 MLSMVIFF-------GGDLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNyfMC 301
Cdd:MTH00111  241 TLTTILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLA--LC 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 4-303 1.11e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 310.69  E-value: 1.11e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   4 WILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVS 83
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  84 LFLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVG 163
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 164 GFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLS 243
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 244 MVIFFGGDLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFF 303
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHT 300
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 11-300 5.17e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 309.25  E-value: 5.17e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  11 MFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSLFLSLLI 90
Cdd:MTH00104    6 ILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTM 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  91 WMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGGFGLNLF 170
Cdd:MTH00104   86 WIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTL 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 171 LIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSMVIFFGG 250
Cdd:MTH00104  166 ITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGA 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117015 251 -------DLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFM 300
Cdd:MTH00104  246 fhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-296 1.13e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 303.47  E-value: 1.13e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   1 MLSWILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCP 80
Cdd:MTH00071    1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  81 IVSLFLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIV 160
Cdd:MTH00071   81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 161 MVGGFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMS 240
Cdd:MTH00071  161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2675117015 241 MLSMVIFFGGDLFSLYFYFGFVFI-------SFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL 296
Cdd:MTH00071  241 TLSTILFLGSTYNHLQPELSTMNLmikasilSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-296 3.11e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 302.30  E-value: 3.11e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   1 MLSWILSVLMMFILLIV-VLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFC 79
Cdd:MTH00134    1 MLSTLITHIINPLAYIVpVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  80 PIVSLFLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFI 159
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 160 VMVGGFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFM 239
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2675117015 240 SMLSMVIFFGG-------DLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL 296
Cdd:MTH00134  241 NTLSAILFLGAshiptlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 2-309 5.85e-100

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 296.50  E-value: 5.85e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   2 LSWILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPI 81
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  82 VSLFLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVM 161
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 162 VGGFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSM 241
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2675117015 242 LSMVIFFGGDL-FSLYFYFGF-------VFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFFWVVWFI 309
Cdd:MTH00040  241 LSVILFLGGGSpFNEIFPINIiivgiktTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-300 8.28e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 293.19  E-value: 8.28e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   5 ILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSL 84
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  85 FLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGG 164
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 165 FGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSM 244
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2675117015 245 VIFFGGDLfSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFM 300
Cdd:MTH00195  242 ILFLGGGG-TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLI 296
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-310 2.14e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 279.36  E-value: 2.14e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   2 LSWILSVLMMFILlivVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPI 81
Cdd:MTH00010    3 ISFFISILLSYVM---ALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPM 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  82 VSLFLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVM 161
Cdd:MTH00010   80 MSLILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 162 VGGFGLNLFlIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSM 241
Cdd:MTH00010  160 LQTFSFSKI-IMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSL 238

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2675117015 242 LSMVIFFG----GDLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFFWVVWFIW 310
Cdd:MTH00010  239 FTSVFFTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NADHdh pfam00146
NADH dehydrogenase;
10-296 4.30e-89

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 268.19  E-value: 4.30e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  10 MMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSLFLSLL 89
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  90 IWMIYPLGYELISFDL--ALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGGFGL 167
Cdd:pfam00146  81 AFAVIPFGPGLVLADLnvGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 168 NLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSMVIF 247
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2675117015 248 FGGDLF------SLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL 296
Cdd:pfam00146 241 LGGWLGpfplpgLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-308 1.58e-83

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 255.05  E-value: 1.58e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   4 WILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVS 83
Cdd:COG1005     8 LLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  84 LFLSLLIWMIYPLGYELISFDL--ALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVM 161
Cdd:COG1005    88 FIPALLAFAVIPFGPGLVLADLnvGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 162 VGGFGLNLFLIYQE-YIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMS 240
Cdd:COG1005   168 AGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVS 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 241 MLSMVIFFGG-----DLFSLYFYFGFV-------FISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL-NYFMCFFWVVW 307
Cdd:COG1005   248 ALATTLFLGGwlgpfPILPLGGLPGILwfllktlFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLvNLVLTAAVVLL 327


                  .
gi 2675117015 308 F 308
Cdd:COG1005   328 F 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 8-298 3.87e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 248.49  E-value: 3.87e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   8 VLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSLFLS 87
Cdd:MTH00054    5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  88 LLIWMIYPLGYELISFDLAL--LFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGGF 165
Cdd:MTH00054   85 FIAWGVIPYGEGVVLSDLGIgiLYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 166 GLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSMV 245
Cdd:MTH00054  165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2675117015 246 IFFGG--------DLFSLYFYFGF--VFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNY 298
Cdd:MTH00054  245 LFLGGwlvisgptSYFSNFVWFGIkiALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAF 307
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-310 6.82e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 243.10  E-value: 6.82e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   1 MLSWILSVLMMFILLIV-VLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFC 79
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVpLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  80 PIVSLFLSLLIWMIYPLGYELISFDL--ALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVS 157
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLISDFkiGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 158 FIVMVGGFGLNLFLIYQ-EYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSI 236
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 237 LFMSMLSMVIFFGGDLFSLYFYFG--------FVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFFWVVWF 308
Cdd:MTH00216  241 ILMSCLTTILFLGGWLSPIKYFKGgagwfglkVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                  ..
gi 2675117015 309 IW 310
Cdd:MTH00216  321 FN 322
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-307 1.12e-77

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 239.71  E-value: 1.12e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   4 WILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVS 83
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  84 LFLSLLIWMIYPLGYELISFDL--ALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVM 161
Cdd:PRK06076   89 FIPAFLAWAVIPFGPELVIADLnvGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 162 VGGFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSM 241
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2675117015 242 LSMVIFFGGDLF----------SLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLnyfmcfFWVVW 307
Cdd:PRK06076  249 LITTLFLGGWLPpfplgggipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL------VNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-296 5.55e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 212.95  E-value: 5.55e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   1 MLSWILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCP 80
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  81 IVSLFLSLLIWMIYPL--GYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSF 158
Cdd:MTH00029   83 IISFTLAILAWAIVTMdqGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 159 IVMVGGFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILF 238
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 239 MSMLSMVIFFGGDLFSLY------------------------FYFGFVFISFiIIWVRGTLPRFRYDKLMYLAWSMYLPV 294
Cdd:MTH00029  243 MSCMMTIFFLGGWLSPLDgiptppeafsifeqiasskssfwfFTKSSIFILF-FIWSRASFPRIRYDQLMKLLWKTYLPL 321


                  ..
gi 2675117015 295 SL 296
Cdd:MTH00029  322 SL 323
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 10-303 7.93e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 200.51  E-value: 7.93e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  10 MMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSLFLSLL 89
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  90 IWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMvggfgLNL 169
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLH-----NNS 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 170 FLIYQEYIWFIFLSVPLFFCWIsscLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSMVIFFG 249
Cdd:MTH00090  156 FSFVSSFSLSLFVIYLPFLIMI---IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2675117015 250 GDLFSLYFYFgfvfisFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFF 303
Cdd:MTH00090  233 FSFLMLFLIF------SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFV 280
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 5-303 3.90e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 162.79  E-value: 3.90e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   5 ILSVLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSL 84
Cdd:MTH00058    1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  85 FLSLLIWMIYPLGYELISFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVGG 164
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 165 FGLNLFliYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLSM 244
Cdd:MTH00058  161 YSLVDF--YYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGS 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2675117015 245 VIFFGGDLFSLYFYFGFVFisfiIIWVRGTLPRFRYDKLMYLAWSMYLPVSLNYFMCFF 303
Cdd:MTH00058  239 VLFFGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
14-296 8.79e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 157.94  E-value: 8.79e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  14 LLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVSLFLSLLIWMI 93
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  94 YPLGYELI----------SFDLALLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVMVG 163
Cdd:NF040610   99 IPFGAVIIngveyplvvtNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 164 GFGLNLFLIYQEYIWFIFLSVPLFFCWISSCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSSILFMSMLS 243
Cdd:NF040610  179 SLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2675117015 244 MVIFFGG---------------DLFSLYFYFGFVFISFIIIWVRGTLPRFRYDKLMYLAWSMYLPVSL 296
Cdd:NF040610  259 VLLFLGGwnlpgfvtdipvlgiILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ndhA CHL00032
NADH dehydrogenase subunit 1
 4-296 6.91e-37

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 135.08  E-value: 6.91e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   4 WILsvLMMFILLIVVLVGVAFLTLLERSVLGYIQIRKGPNSVGIFGFPQPFADAIKLFCSEQNYPLVSNYLMYFFCPIVS 83
Cdd:CHL00032   28 WIL--VPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  84 LFLSLLIWMIYPLGYELISFDLALLFFFCVTGMSV--YSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSFIVM 161
Cdd:CHL00032  106 VISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIapIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 162 ---------------VGGFGLNLfliYQEYIWFIflsvpLFFcwISScLAEMNRTPFDFSEGESELVSGFNVEYSSGGFA 226
Cdd:CHL00032  186 snslstvdiveaqskYGFWGWNL---WRQPIGFI-----VFL--ISS-LAECERLPFDLPEAEEELVAGYQTEYSGIKFG 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 227 LIFMAEYSSILFMSMLSMVIFFGGDLFSLYFYFGF-----------------VFIS--------FIIIWVRGTLPRFRYD 281
Cdd:CHL00032  255 LFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPelfeinktggvfgttigIFITlaktylflFISITTRWTLPRLRMD 334

                         330
                  ....*....|....*
gi 2675117015 282 KLMYLAWSMYLPVSL 296
Cdd:CHL00032  335 QLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-288 3.40e-20

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 88.70  E-value: 3.40e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015   1 MLSWILSVLMMFILLIVVLvgvaFLTLLERSVLGYIQIRKGPnsvGIFgfpQPFADAIKLFCSEQNYPLVSNYLMYFFcP 80
Cdd:COG0650     1 MMLILLALLQLLLALLLAP----LLLGIIRKVKARLQGRRGP---PIL---QPYYDLLKLLRKETVVPETASWLFRAA-P 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015  81 IVSLFLSLLIWMIYPLGYELISFDLA--LLFFFCVTGMSVYSMMLAGWSSNSNYALLGGLRAVAQTISYEVVLSLILVSF 158
Cdd:COG0650    70 YVALAAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFAL 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117015 159 IVMVGGFGLNLFLIYQEYIWFIFLSVPLFFCWIS---SCLAEMNRTPFDFSEGESELVSGFNVEYSSGGFALIFMAEYSS 235
Cdd:COG0650   150 ALLAGSTSLSDIVAYQAAHGPLLLSPSLLLAAIAffiVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALK 229

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2675117015 236 ILFMSMLSMVIFFGGDLFSLY------FYFGFVFISFIIIWVRGTLPRFRYDKLMYLAW 288
Cdd:COG0650   230 LFVLLSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLW 288
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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