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Conserved domains on  [gi|2675117021|gb|WVW00566|]
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ATP synthase F0 subunit 6 (mitochondrion) [Xenogryllus maniema]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-227 3.38e-88

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 259.71  E-value: 3.38e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDPTSAlFQLPLNWLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLNKEFKMLLiSNKNLGSTFMFLSLLTF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLL-GPKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  81 IMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLSV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117021 161 RLAANMIAGHLLLTLLGNTGPMLMNSTLLiqILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSEVN 227
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILS--ILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-227 3.38e-88

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 259.71  E-value: 3.38e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDPTSAlFQLPLNWLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLNKEFKMLLiSNKNLGSTFMFLSLLTF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLL-GPKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  81 IMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLSV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117021 161 RLAANMIAGHLLLTLLGNTGPMLMNSTLLiqILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSEVN 227
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILS--ILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-227 1.43e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 146.20  E-value: 1.43e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   5 LFSSFDPTS-ALFQLPLNWLSTSISLLLMPMMF----WLMPTRISMSWNTLLLYLNKEFKMLlISNKNLGSTFMFLSLLT 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQ-IGGKKGKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  80 FIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLS 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2675117021 160 VRLAANMIAGHLLLTLLGNTGPMLMnSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSEVN 227
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLM-SSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-224 6.70e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 134.45  E-value: 6.70e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNI 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2675117021 153 IRPITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIvsQIMLLILEMAVSLIQSYVFAVLTALYSS 224
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLL--PVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
73-224 1.11e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 102.18  E-value: 1.11e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLF---PYIFTSSSHLTFTLTFALTMWMSFMLYGWISN-TQHMFAHLVPQGTPPILMPFMVCIET 148
Cdd:pfam00119  60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEI 139

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117021 149 ISNIIRPITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQIL-IVSQIMLLILEMAVSLIQSYVFAVLTALYSS 224
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-222 5.27e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 89.75  E-value: 5.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISN-TQHMFAHLVPQGTPPiLMPFMVCIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2675117021 152 IIRPITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVsqimLLILEMAVSLIQSYVFAVLTALY 222
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPVA----WTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-227 3.38e-88

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 259.71  E-value: 3.38e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDPTSAlFQLPLNWLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLNKEFKMLLiSNKNLGSTFMFLSLLTF 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLL-GPKNKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  81 IMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLSV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117021 161 RLAANMIAGHLLLTLLGNTGPMLMNSTLLiqILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSEVN 227
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILS--ILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-226 2.31e-44

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 148.26  E-value: 2.31e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDPTSALF--QLPLNWLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLnKEFKMLLISNKNLGSTFMFLSLL 78
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFL-PEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  79 TFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2675117021 159 SVRLAANMIAGHLLLTLLGNTGPMLMNSTLLI-QILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSEV 226
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIgFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-227 1.43e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 146.20  E-value: 1.43e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   5 LFSSFDPTS-ALFQLPLNWLSTSISLLLMPMMF----WLMPTRISMSWNTLLLYLNKEFKMLlISNKNLGSTFMFLSLLT 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQ-IGGKKGKFFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  80 FIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLS 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2675117021 160 VRLAANMIAGHLLLTLLGNTGPMLMnSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSEVN 227
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLM-SSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-224 6.70e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 134.45  E-value: 6.70e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNI 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2675117021 153 IRPITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIvsQIMLLILEMAVSLIQSYVFAVLTALYSS 224
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLL--PVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-225 4.67e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 132.16  E-value: 4.67e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDP-TSALFQLPLN---WLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLNKEFKMLLISNKNlGSTFMFLS 76
Cdd:MTH00005    1 MLTDIFSSFDPaTNSLFNNLSStafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLK-GFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  77 LLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPI 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021 157 TLSVRLAANMIAGHLLLTLLGN-TGPMLMNSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSE 225
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIyAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-225 4.98e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 126.90  E-value: 4.98e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDPTSALFQLP--LNWLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLNKEFKMLLISNKNLGSTFMFlSLL 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSLsfLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLS-SLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  79 TFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2675117021 159 SVRLAANMIAGHLLLTLLGN--TGPMLMNSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSE 225
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNylSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-225 9.81e-36

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 125.86  E-value: 9.81e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   3 TNLFSSFDPTSALFqLPLNWLSTSISL---LLMPMMFWLmPTRISMSWNTlllYLNKEFKMLL--ISNKNLGSTFMFLSL 77
Cdd:MTH00035    5 NSIFGQFSPDTILF-IPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLT---FRQEILKLIFqnTNPNTAPWAGLLTTV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  78 LTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPIT 157
Cdd:MTH00035   80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2675117021 158 LSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALYSSE 225
Cdd:MTH00035  160 LGLRLAANLTAGHLLIFLLSTAIWELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-225 2.71e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 116.97  E-value: 2.71e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDPTSaLFQLPLNWLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLNKEFKMLLISNKNLGSTFMFLSLLTF 80
Cdd:MTH00179    1 MMLSMFDQFESPS-LLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  81 IMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLSV 160
Cdd:MTH00179   80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2675117021 161 RLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVSQ-IMLLILEMAVSLIQSYVFAVLTALYSSE 225
Cdd:MTH00179  160 RLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-222 4.50e-31

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 113.89  E-value: 4.50e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDpTSALFQLPLNWLSTSISLLLMPMMFWLMPTRISMSWNTLLLYLNKEFkMLLISNKNLGSTFMFLSLLTF 80
Cdd:MTH00101    1 MNENLFASFI-TPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQM-MTIHNTKGQTWSLMLMSLILF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  81 IMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLSV 160
Cdd:MTH00101   79 IGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2675117021 161 RLAANMIAGHLLLTLLGNTGPMLMN-STLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALY 222
Cdd:MTH00101  159 RLTANITAGHLLIHLIGGATLALMSiSTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-225 1.22e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 112.61  E-value: 1.22e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFDPTSALFqlplnwLSTSISLLLMPMMFWLMPT------RISMSWNTLLLYLNKEFkMLLISNKNLGSTFMF 74
Cdd:MTH00120    1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKnrlltnRLTTLQLWLIKLITKQL-MLPLNKKGHKWALIL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  75 LSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIR 154
Cdd:MTH00120   74 TSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIR 153

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2675117021 155 PITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVSQIMLL-ILEMAVSLIQSYVFAVLTALYSSE 225
Cdd:MTH00120  154 PLALGVRLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLtILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-225 1.52e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 104.66  E-value: 1.52e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021   1 MMTNLFSSFdPTSALFQLPLNWLSTSISLLLMPM-MFWLMPTRISMSWNTLLLYLNKEFkMLLISNKNLGSTFMFLSLLT 79
Cdd:MTH00073    1 MNLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFPTpTNKWLNNRLSTLQIWFLQNFTKQL-MLPLNTPGHKWALILTSLMV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  80 FIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIRPITLS 159
Cdd:MTH00073   79 FLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117021 160 VRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVSQIMLL-ILEMAVSLIQSYVFAVLTALYSSE 225
Cdd:MTH00073  159 VRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLtLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-225 2.09e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 104.18  E-value: 2.09e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNI 152
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117021 153 IRPITLSVRLAANMIAGHLLLTLLGNTG----PMLMNSTLLIQILIVsqiMLLILEMAVSLIQSYVFAVLTALYSSE 225
Cdd:MTH00132  152 IRPLALGVRLTANLTAGHLLIQLIATAAfvllPLMPTVAILTATLLF---LLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
73-224 1.11e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 102.18  E-value: 1.11e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLF---PYIFTSSSHLTFTLTFALTMWMSFMLYGWISN-TQHMFAHLVPQGTPPILMPFMVCIET 148
Cdd:pfam00119  60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEI 139

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2675117021 149 ISNIIRPITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQIL-IVSQIMLLILEMAVSLIQSYVFAVLTALYSS 224
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 75-222 3.99e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 95.88  E-value: 3.99e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  75 LSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIR 154
Cdd:MTH00172   76 ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISR 155

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2675117021 155 PITLSVRLAANMIAGHLLLTLLGNTG-PMLMNSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALY 222
Cdd:MTH00172  156 AISLGVRLAANLSAGHLLFAILAGFGfNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 75-222 7.08e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 95.46  E-value: 7.08e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  75 LSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIR 154
Cdd:MTH00175   87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2675117021 155 PITLSVRLAANMIAGHLLLTLL-GNTGPMLMNStLLIQILIVSQIMLLI--LEMAVSLIQSYVFAVLTALY 222
Cdd:MTH00175  167 AISLGVRLAANISAGHLLFAILsGFAFNMLSNG-LIILSLFPMLIMIFItlLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 73-222 5.27e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 89.75  E-value: 5.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISN-TQHMFAHLVPQGTPPiLMPFMVCIETISN 151
Cdd:COG0356    60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISE 138

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2675117021 152 IIRPITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVsqimLLILEMAVSLIQSYVFAVLTALY 222
Cdd:COG0356   139 LARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPVA----WTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 75-222 6.02e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 82.29  E-value: 6.02e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  75 LSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETISNIIR 154
Cdd:MTH00174   95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021 155 PITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVSQIMLL--ILEMAVSLIQSYVFAVLTALY 222
Cdd:MTH00174  175 AISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILIFvtILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-222 2.69e-18

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 80.22  E-value: 2.69e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  73 MFLSLLTFIMFNNFMGLFP-YIFTSSSHLTFTLTFALTMWMSFMLYG-WISNTQHMFAHLVPQgtppiLMPFMVCIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2675117021 151 NIIRPITLSVRLAANMIAGHLLLTLLGNTGPMLMnstLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALY 222
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGL---LLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 57-222 7.99e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 66.30  E-value: 7.99e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  57 EFKMLLISNKNLGSTF-----MFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTL-----TFALTMWMSFMLYGWISNTQHM 126
Cdd:PRK13419  152 EFIRLDVAKSNIGHGYekflpYLLTVFFFILVCNLLGLVPYGATATGNINVTLtlavfTFFITQYAAIKAHGIKGYLAHL 231

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021 127 FAhlvpqGTPPILMPFMVCIETISNIIRPITLSVRLAANMIAGHLLLTLLGNTGPMLMNSTLLIQILIVSQIMLLILEMA 206
Cdd:PRK13419  232 TG-----GTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIYLLELF 306

                         170
                  ....*....|....*.
gi 2675117021 207 VSLIQSYVFAVLTALY 222
Cdd:PRK13419  307 VAFLQAYIFTMLSALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-222 2.81e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 53.36  E-value: 2.81e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  95 TSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVCIETI-SNIIRPITLSVRLAANMIAGHLLL 173
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 2675117021 174 TLLgnTGPMLM-NSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALY 222
Cdd:PRK13417  297 LAL--MGFIFQfQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 66-169 4.42e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 45.26  E-value: 4.42e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  66 KNLGSTFMFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQHMFAHLVPQGTPPILMPFMVC 145
Cdd:MTH00050   18 LGGSVSYYYSVVLFIVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCI 97

                          90       100
                  ....*....|....*....|....
gi 2675117021 146 IETISNIIRPITLSVRLAANMIAG 169
Cdd:MTH00050   98 AETISYIIRPVVLILRPFINISLG 121
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 64-225 9.78e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 44.58  E-value: 9.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  64 SNKNLGSTFMFLSLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGWISNTQhmFAHLVPQGTPPILMPF- 142
Cdd:MTH00087   45 SNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK--FSVYLSKGSDSFLKTFs 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021 143 MVCIETISNIIRPITLSVRLAANMIAGHLlltllgntgpMLMNSTLLIQILIVSQIMLLILEMAVSLIQSYVFAVLTALY 222
Cdd:MTH00087  123 MLFVEIVSELSRPLALTLRLTVNLMVGHL----------ISSLLNFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLY 192


                  ...
gi 2675117021 223 SSE 225
Cdd:MTH00087  193 LNE 195
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 76-222 4.12e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 40.11  E-value: 4.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2675117021  76 SLLTFIMFNNFMGLFPYIFTSSSHLTFTLTFALTMWMSFMLYGwiSNTQHMFAHLVPQGTP-PILMPFMVcietISNIIR 154
Cdd:PRK13420   80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFG--IRAEGLREYLKHYLSPsPFLLPFHL----ISEITR 153

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2675117021 155 PITLSVRLAANMiaghllltllgntgpMLMNSTLLIQILI---VSQIMLLILEMAVSLIQSYVFAVLTALY 222
Cdd:PRK13420  154 TLALAVRLFGNI---------------MSLELAALLVLLVagfLVPVPILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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