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Conserved domains on  [gi|2709198476|gb|WYN07500|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Torneuma aphroditae]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-91 5.56e-12

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 56.32  E-value: 5.56e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198476  6 YMYMVVVMFLSSVYIYVSKYKHLLLMLLALESIVLSLYFLMFLYFSWILQESFMLMFFLSLSVCESALGLSLLVLVIRAF 85
Cdd:MTH00162   3 MLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*.
gi 2709198476 86 GDDMMM 91
Cdd:MTH00162  83 GNDYFS 88
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-91 5.56e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 56.32  E-value: 5.56e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198476  6 YMYMVVVMFLSSVYIYVSKYKHLLLMLLALESIVLSLYFLMFLYFSWILQESFMLMFFLSLSVCESALGLSLLVLVIRAF 85
Cdd:MTH00162   3 MLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*.
gi 2709198476 86 GDDMMM 91
Cdd:MTH00162  83 GNDYFS 88
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-91 5.56e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 56.32  E-value: 5.56e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198476  6 YMYMVVVMFLSSVYIYVSKYKHLLLMLLALESIVLSLYFLMFLYFSWILQESFMLMFFLSLSVCESALGLSLLVLVIRAF 85
Cdd:MTH00162   3 MLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*.
gi 2709198476 86 GDDMMM 91
Cdd:MTH00162  83 GNDYFS 88
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 7-94 2.01e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 42.14  E-value: 2.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198476  7 MYMVVVMFLSSVYIYVSKYKHLLLMLLALESIVLSLYFLMFLYFSWILQESFMLMFFLSLSVCESALGLSLLVLVIRAFG 86
Cdd:MTH00149   6 LLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHG 85


                 ....*...
gi 2709198476 87 DDMMMIFD 94
Cdd:MTH00149  86 NDYVSSLS 93
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 26-90 6.38e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 35.59  E-value: 6.38e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2709198476 26 KHLLLMLLALESIVLSLYFLMFLYFSWILQESFMLM--FFLSLSVCESALGLSLLVLVIRAFGDDMM 90
Cdd:MTH00125  24 THLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMpiILLTFSACEAGTGLALLVATTRTHGSDHL 90
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 2-89 1.04e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 34.95  E-value: 1.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198476  2 LIYTYMYMVVVMFLSSVYIYVSKYKHLLLMLLALESIVLSLYFLMFLYFSWILQESFMLMFFLSLSVCESALGLSLLVLV 81
Cdd:MTH00188   1 MFFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSL 80


                 ....*...
gi 2709198476 82 IRAFGDDM 89
Cdd:MTH00188  81 IRSHGSDY 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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