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Conserved domains on  [gi|2709198479|gb|WYN07503|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Torneuma aphroditae]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 3.33e-131

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 375.65  E-value: 3.33e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLN 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLIN 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 166 SYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLC 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 246 AMMFLGGNLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 3.33e-131

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 375.65  E-value: 3.33e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLN 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLIN 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 166 SYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLC 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 246 AMMFLGGNLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
NADHdh pfam00146
NADH dehydrogenase;
14-304 3.06e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.99  E-value: 3.06e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  14 LILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNLLVAFLLW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  94 MSMPF--YSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINSYDIFN 171
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 172 FMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCAMMFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198479 252 GNLFSF------YFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFY 304
Cdd:pfam00146 243 GWLGPFplpgllWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-298 9.42e-91

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 273.54  E-value: 9.42e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   1 MEFF--DFILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMY 78
Cdd:COG1005     1 MSLLlaPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  79 LIMPVLNLLVAFLLWMSMPF--YSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLI 156
Cdd:COG1005    81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 157 LLSFLLLINSYDIFNFMKYQE-YSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEY 235
Cdd:COG1005   161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 236 ASILFMSMLCAMMFLGGNLFSF------------YFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSL 298
Cdd:COG1005   241 ANMFLVSALATTLFLGGWLGPFpilplgglpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-310 3.33e-131

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 375.65  E-value: 3.33e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLN 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLIN 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 166 SYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLC 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 246 AMMFLGGNLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-308 4.09e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 344.93  E-value: 4.09e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINS 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 167 YDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCA 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2709198479 247 MMFLGGN-----LFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLS 308
Cdd:MTH00143  241 VLFFGGSsvlflLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-309 3.17e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 332.38  E-value: 3.17e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINS 166
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 167 YDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCA 246
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 247 MMFLGG--NLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSM 309
Cdd:MTH00225  241 ILFFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-314 1.24e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 311.17  E-value: 1.24e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLN 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLIN 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 166 SYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLC 245
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2709198479 246 AMMFLGG-------NLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMISMII 314
Cdd:MTH00071  244 TILFLGStynhlqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-309 1.46e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 311.06  E-value: 1.46e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLW--MSMPFYSVNLsfNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLI 164
Cdd:MTH00111   85 LLALTIWtpLPMPFPLADL--NLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 165 NSYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSML 244
Cdd:MTH00111  163 GGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTL 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2709198479 245 CAMMFL-------GGNLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSM 309
Cdd:MTH00111  243 TTILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-310 2.86e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 309.92  E-value: 2.86e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLN 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLIN 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 166 SYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLC 245
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 246 AMMFLGGNLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMI 310
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLS 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 11-310 5.20e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 309.63  E-value: 5.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  11 ITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNLLVAF 90
Cdd:MTH00104    4 INILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLAL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  91 LLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINSYDIF 170
Cdd:MTH00104   84 TMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 171 NFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCAMMFL 250
Cdd:MTH00104  164 TLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFL 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2709198479 251 GG-------NLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMI 310
Cdd:MTH00104  244 GAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIM 310
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 7-307 3.28e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 307.05  E-value: 3.28e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINS 166
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 167 YDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCA 246
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2709198479 247 MMFLGGNLfSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSL 307
Cdd:MTH00195  242 ILFLGGGG-TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAI 301
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-317 3.66e-101

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 299.97  E-value: 3.66e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINS 166
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 167 YDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCA 246
Cdd:MTH00040  164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198479 247 MMFLGGNLFSFYFF--------VKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMISMIILFM 317
Cdd:MTH00040  244 ILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPPN 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 6-307 8.85e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 298.83  E-value: 8.85e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLN 85
Cdd:MTH00134    5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLIN 165
Cdd:MTH00134   85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 166 SYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLC 245
Cdd:MTH00134  165 GFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198479 246 AMMFLGGNLF-------SFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSL 307
Cdd:MTH00134  245 AILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLAL 313
NADHdh pfam00146
NADH dehydrogenase;
14-304 3.06e-97

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 288.99  E-value: 3.06e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  14 LILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNLLVAFLLW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  94 MSMPF--YSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINSYDIFN 171
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 172 FMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCAMMFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198479 252 GNLFSF------YFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFY 304
Cdd:pfam00146 243 GWLGPFplpgllWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 7-312 2.35e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 274.35  E-value: 2.35e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINS 166
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 167 YDiFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCA 246
Cdd:MTH00010  163 FS-FSKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTS 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 247 MMFLG----GNLFSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSMISM 312
Cdd:MTH00010  242 VFFTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-298 9.42e-91

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 273.54  E-value: 9.42e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   1 MEFF--DFILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMY 78
Cdd:COG1005     1 MSLLlaPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  79 LIMPVLNLLVAFLLWMSMPF--YSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLI 156
Cdd:COG1005    81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 157 LLSFLLLINSYDIFNFMKYQE-YSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEY 235
Cdd:COG1005   161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 236 ASILFMSMLCAMMFLGGNLFSF------------YFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSL 298
Cdd:COG1005   241 ANMFLVSALATTLFLGGWLGPFpilplgglpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-303 4.50e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 271.60  E-value: 4.50e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYS--VNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLI 164
Cdd:MTH00054   82 TLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 165 NSYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSML 244
Cdd:MTH00054  162 GSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTF 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198479 245 CAMMFLGGNLFSF----------YFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMF 303
Cdd:MTH00054  242 GVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVL 310
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 7-307 4.33e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 266.60  E-value: 4.33e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00216    6 IFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYSVNL--SFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLI 164
Cdd:MTH00216   86 TLALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 165 NSYDIFNFMKYQEYS-WFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 243
Cdd:MTH00216  166 GSLSITEIVLAQNNGiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2709198479 244 LCAMMFLGGNL--------FSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSL 307
Cdd:MTH00216  246 LTTILFLGGWLspikyfkgGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-298 2.87e-83

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 254.35  E-value: 2.87e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLN 85
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYS-VNLSF-NLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLL 163
Cdd:PRK06076   89 FIPAFLAWAVIPFGPeLVIADlNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 164 INSYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 243
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2709198479 244 LCAMMFLGGNLF----------SFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSL 298
Cdd:PRK06076  249 LITTLFLGGWLPpfplgggipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-303 7.26e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 231.06  E-value: 7.26e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   1 MEFFDFILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLI 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  81 MPVLNLLVAFLLW--MSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILL 158
Cdd:MTH00029   81 APIISFTLAILAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 159 SFLLLINSYDIFNFMKYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASI 238
Cdd:MTH00029  161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 239 LFMSMLCAMMFLGGNL-----------------------FSFYFFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLP 295
Cdd:MTH00029  241 ILMSCMMTIFFLGGWLspldgiptppeafsifeqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320


                  ....*...
gi 2709198479 296 VSLNLLMF 303
Cdd:MTH00029  321 LSLGLVIL 328
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 14-309 1.20e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 202.82  E-value: 1.20e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  14 LILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNLLVAFLLW 93
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  94 MSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINSYDIFNFM 173
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 174 KYqeysWFIFLFFPLSMMwvtsSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCAMMFLGGN 253
Cdd:MTH00090  163 SL----SLFVIYLPFLIM----IIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFS 234

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2709198479 254 LFSFYFFVKIVfmsfvwVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYFSLSM 309
Cdd:MTH00090  235 FLMLFLIFSLL------IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-305 3.38e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 155.47  E-value: 3.38e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   7 ILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIMPVLNL 86
Cdd:MTH00058    1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  87 LVAFLLWMSMPFYSVNLSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLLINS 166
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 167 YDIFNFmkYQEYSWFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLCA 246
Cdd:MTH00058  161 YSLVDF--YYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGS 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198479 247 MMFLGGNLFSFYffvkIVFMSFVWVWVRGALPRYRYDKLMYLAWKsylpVSLNLLMFYF 305
Cdd:MTH00058  239 VLFFGGGFVSIM----LLFHLLFFMWARATLPRVRYDYFVNFFWE----YCLVLLILSL 289
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-302 2.68e-41

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 147.02  E-value: 2.68e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   2 EFFDFILIVITSLILIVGVFIGMAFLTLMERKALGYIHNRKGPNKLGIIGILQPFGDAIKLFTKEQVFPLKSNLIMYLIM 81
Cdd:CHL00032   22 EVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  82 PVLNLLVAFLLWMSMPF-YSVNLS-FNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLS 159
Cdd:CHL00032  102 PSIAVISILLSYLVIPFgYHLVLAdLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 160 FLLLINS---YDIFNFM-KYQEYSWFI------FLFFplsmmwVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFAL 229
Cdd:CHL00032  182 ISLLSNSlstVDIVEAQsKYGFWGWNLwrqpigFIVF------LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGL 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 230 IFLAEYASILFMSMLCAMMFLGG-NLFSFYFFV------------------------KIVFMSFVWVWVRGALPRYRYDK 284
Cdd:CHL00032  256 FYVASYLNLLVSSLFVTVLYLGGwNLSIPYIFIpelfeinktggvfgttigifitlaKTYLFLFISITTRWTLPRLRMDQ 335

                         330
                  ....*....|....*....
gi 2709198479 285 LMYLAWKSYLPVSL-NLLM 302
Cdd:CHL00032  336 LLNLGWKFLLPISLgNLLL 354
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-305 1.05e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 106.42  E-value: 1.05e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479   6 FILIVITSLILIVGVFIGMaFLTLMERKALGYIHNRKGPnklgiiGILQPFGDAIKLFTKEQVFPlKSNLIMYLIMPVLN 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAP-LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVA 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479  86 LLVAFLLWMSMPFYSVN--LSFNLSVLYFFCISSLGVYMVMLAGWSSNSNYAMLGAMRAAAQTISYEVSLVLILLSFLLL 163
Cdd:COG0650    73 LAAMLLAALLVPVLTTGppLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALL 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2709198479 164 INSYDIFNFMKYQEYS---WFIFLFFPLSMMWVTSSLAETNRSPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILF 240
Cdd:COG0650   153 AGSTSLSDIVAYQAAHgplLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFV 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2709198479 241 MSMLCAMMFLGGNLFSFY------FFVKIVFMSFVWVWVRGALPRYRYDKLMYLAWKSYLPVSLNLLMFYF 305
Cdd:COG0650   233 LLSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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