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Conserved domains on  [gi|545699984|ref|XP_005702419|]
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uncharacterized protein Gasu_64420 [Galdieria sulphuraria]

Protein Classification

electron transfer flavoprotein regulatory factor 1( domain architecture ID 14448812)

electron transfer flavoprotein regulatory factor 1 (ETFRF1) acts as a regulator of the electron transfer flavoprotein by promoting the removal of flavin from the ETF holoenzyme (composed of ETFA and ETFB)

Gene Ontology:  GO:0022904

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Complex1_LYR_ETFRF1_LYRM5 cd20265
LYR (leucine-tyrosine-arginine) motif found in electron transfer flavoprotein regulatory ...
 2-75 7.61e-26

LYR (leucine-tyrosine-arginine) motif found in electron transfer flavoprotein regulatory factor 1 (ETFRF1) and similar proteins; ETFRF1, also called LYR motif-containing protein 5 (LYRM5), or Ghiso (growth-factor inducible soluble) factor, acts as a regulator of the electron transfer flavoprotein by promoting the removal of flavin from the ETF holoenzyme (composed of ETFA and ETFB). It belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus.


:

Pssm-ID: 380760  Cd Length: 74  Bit Score: 90.33  E-value: 7.61e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 545699984  2 DYRVRLLYKRFLLVGRQYPEPFGIVREKIKRGFQANSTNCDKPSIERALEHGEFVLKEAQALVSLHKYRTLNKR 75
Cdd:cd20265   1 RSRVRQLYKRLLYLGRDYPGGLDYFRDRLKRAFMKNKDLTDPEEIKKAIARGEYVIKELEALYSLRKYRALKKR 74
 
Name Accession Description Interval E-value
Complex1_LYR_ETFRF1_LYRM5 cd20265
LYR (leucine-tyrosine-arginine) motif found in electron transfer flavoprotein regulatory ...
 2-75 7.61e-26

LYR (leucine-tyrosine-arginine) motif found in electron transfer flavoprotein regulatory factor 1 (ETFRF1) and similar proteins; ETFRF1, also called LYR motif-containing protein 5 (LYRM5), or Ghiso (growth-factor inducible soluble) factor, acts as a regulator of the electron transfer flavoprotein by promoting the removal of flavin from the ETF holoenzyme (composed of ETFA and ETFB). It belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus.


Pssm-ID: 380760  Cd Length: 74  Bit Score: 90.33  E-value: 7.61e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 545699984  2 DYRVRLLYKRFLLVGRQYPEPFGIVREKIKRGFQANSTNCDKPSIERALEHGEFVLKEAQALVSLHKYRTLNKR 75
Cdd:cd20265   1 RSRVRQLYKRLLYLGRDYPGGLDYFRDRLKRAFMKNKDLTDPEEIKKAIARGEYVIKELEALYSLRKYRALKKR 74
 
Name Accession Description Interval E-value
Complex1_LYR_ETFRF1_LYRM5 cd20265
LYR (leucine-tyrosine-arginine) motif found in electron transfer flavoprotein regulatory ...
 2-75 7.61e-26

LYR (leucine-tyrosine-arginine) motif found in electron transfer flavoprotein regulatory factor 1 (ETFRF1) and similar proteins; ETFRF1, also called LYR motif-containing protein 5 (LYRM5), or Ghiso (growth-factor inducible soluble) factor, acts as a regulator of the electron transfer flavoprotein by promoting the removal of flavin from the ETF holoenzyme (composed of ETFA and ETFB). It belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus.


Pssm-ID: 380760  Cd Length: 74  Bit Score: 90.33  E-value: 7.61e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 545699984  2 DYRVRLLYKRFLLVGRQYPEPFGIVREKIKRGFQANSTNCDKPSIERALEHGEFVLKEAQALVSLHKYRTLNKR 75
Cdd:cd20265   1 RSRVRQLYKRLLYLGRDYPGGLDYFRDRLKRAFMKNKDLTDPEEIKKAIARGEYVIKELEALYSLRKYRALKKR 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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