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Conserved domains on  [gi|2217375893|ref|XP_011516073|]
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doublesex- and mab-3-related transcription factor 1 isoform X2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Dmrt1 super family cl13767
Double-sex mab3 related transcription factor 1; This domain family is found in eukaryotes, and ...
 1-44 8.82e-09

Double-sex mab3 related transcription factor 1; This domain family is found in eukaryotes, and is typically between 61 and 73 amino acids in length. The family is found in association with pfam00751. This family is a transcription factor involved in sex determination. The proteins in this family contain a zinc finger-like DNA-binding motif, DM domain.


The actual alignment was detected with superfamily member pfam12374:

Pssm-ID: 463555  Cd Length: 71  Bit Score: 50.52  E-value: 8.82e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2217375893   1 MTECSGTSQP-PPASVPTTAASEGRMVIQDIPAVTSRGHVENTPD 44
Cdd:pfam12374  27 FSESGSSPTPtSSSTAASSAATGGRSLISDIPSAASRGHLEGTSD 71
 
Name Accession Description Interval E-value
Dmrt1 pfam12374
Double-sex mab3 related transcription factor 1; This domain family is found in eukaryotes, and ...
 1-44 8.82e-09

Double-sex mab3 related transcription factor 1; This domain family is found in eukaryotes, and is typically between 61 and 73 amino acids in length. The family is found in association with pfam00751. This family is a transcription factor involved in sex determination. The proteins in this family contain a zinc finger-like DNA-binding motif, DM domain.


Pssm-ID: 463555  Cd Length: 71  Bit Score: 50.52  E-value: 8.82e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2217375893   1 MTECSGTSQP-PPASVPTTAASEGRMVIQDIPAVTSRGHVENTPD 44
Cdd:pfam12374  27 FSESGSSPTPtSSSTAASSAATGGRSLISDIPSAASRGHLEGTSD 71
 
Name Accession Description Interval E-value
Dmrt1 pfam12374
Double-sex mab3 related transcription factor 1; This domain family is found in eukaryotes, and ...
 1-44 8.82e-09

Double-sex mab3 related transcription factor 1; This domain family is found in eukaryotes, and is typically between 61 and 73 amino acids in length. The family is found in association with pfam00751. This family is a transcription factor involved in sex determination. The proteins in this family contain a zinc finger-like DNA-binding motif, DM domain.


Pssm-ID: 463555  Cd Length: 71  Bit Score: 50.52  E-value: 8.82e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2217375893   1 MTECSGTSQP-PPASVPTTAASEGRMVIQDIPAVTSRGHVENTPD 44
Cdd:pfam12374  27 FSESGSSPTPtSSSTAASSAATGGRSLISDIPSAASRGHLEGTSD 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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