|
Name |
Accession |
Description |
Interval |
E-value |
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
21-289 |
3.58e-38 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 145.10 E-value: 3.58e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 21 FYNSALLMKLAQKGEGNLECNWKISDHAADWNKYDDRLMKAAERGDVEKVTSILAKKGVNPGKLDVEGRSVFHVVTSKGN 100
Cdd:COG0666 20 LLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGD 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 101 LECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASV 180
Cdd:COG0666 100 LEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 181 NAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALGHDSSYYA 260
Cdd:COG0666 180 NARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLA 259
|
250 260
....*....|....*....|....*....
gi 1034591230 261 RIGDNLDILTLLKTASENTNKGRELWKKG 289
Cdd:COG0666 260 AAAGAALIVKLLLLALLLLAAALLDLLTL 288
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
41-281 |
2.47e-37 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 142.79 E-value: 2.47e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 41 NWKISDHAADWNKYDDRLMKAAERGDVEKVTSILAKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILIHGVDITTSDTA 120
Cdd:COG0666 7 LLLLLLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 121 GRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRP 200
Cdd:COG0666 87 GNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 201 TICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALGHDSSYYARIGDNLDILTLLKTASENTN 280
Cdd:COG0666 167 EIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLN 246
|
.
gi 1034591230 281 K 281
Cdd:COG0666 247 A 247
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
73-272 |
3.99e-29 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 118.90 E-value: 3.99e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 73 ILAKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADL 152
Cdd:COG0666 6 LLLLLLLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDD 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 153 QGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGC 232
Cdd:COG0666 86 GGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGN 165
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1034591230 233 RDAVEVLIKNGADISLLDALGHDSSYYARIGDNLDILTLL 272
Cdd:COG0666 166 LEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLL 205
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
22-224 |
2.09e-21 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 96.18 E-value: 2.09e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 22 YNSALLMKLAQKGegNLECNWKISDHAADWNKYDDR----LMKAAERGDVEKVTsILAKKGVNPGKLDVEGRSVFHVVTS 97
Cdd:COG0666 86 GGNTLLHAAARNG--DLEIVKLLLEAGADVNARDKDgetpLHLAAYNGNLEIVK-LLLEAGADVNAQDNDGNTPLHLAAA 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 98 KGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHG 177
Cdd:COG0666 163 NGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAG 242
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1034591230 178 ASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTAL 224
Cdd:COG0666 243 ADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
565-1366 |
1.35e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.89 E-value: 1.35e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 565 QLKDLKVKYEGASAEVGKLRNQIKQNEMivEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKL- 643
Cdd:TIGR02168 214 RYKELKAELRELELALLVLRLEELREEL--EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELy 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 644 ALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQhvKPEEHEQVKSRLEqksgELGK 723
Cdd:TIGR02168 292 ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEE--LKEELESLEAELE----ELEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 724 KITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEME 803
Cdd:TIGR02168 366 ELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEEL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 804 KLLLEndslsKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVP-- 881
Cdd:TIGR02168 446 EEELE-----ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLsg 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 882 --------VKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKD---------------KNEILKRNLENTQNQI 938
Cdd:TIGR02168 521 ilgvlselISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNElgrvtflpldsikgtEIQGNDREILKNIEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 939 KAEYISLAEHEAK----MSSLSQSMRKVQD-SNAEILANYRKGQEEIVTL------------------HAEIKAQKKELD 995
Cdd:TIGR02168 601 LGVAKDLVKFDPKlrkaLSYLLGGVLVVDDlDNALELAKKLRPGYRIVTLdgdlvrpggvitggsaktNSSILERRREIE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 996 TIQECIkvkyapivsfEECERKFKATEKELKDQLSEQTQKysvsEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSH 1075
Cdd:TIGR02168 681 ELEEKI----------EELEEKIAELEKALAELRKELEEL----EEELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1076 EMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEEL 1155
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1156 KSMQRCYEKEQQTVTKLHQLLE-----------NQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKL 1224
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEelsedieslaaEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1225 QSEVQNTKQALKKLETRevvdLSKYKATKSDLETQISSLNEKLANL-NRKYEEVCEEVLHAKKKEISAKDEKELLHFSIE 1303
Cdd:TIGR02168 907 ESKRSELRRELEELREK----LAQLELRLEGLEVRIDNLQERLSEEySLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 1304 ----------QEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDV-ERLKQALNGLSQLTYTSG 1366
Cdd:TIGR02168 983 elgpvnlaaiEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARERFKDTfDQVNENFQRVFPKLFGGG 1056
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
68-251 |
1.76e-19 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 93.55 E-value: 1.76e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 68 EKVTSILAKKGVNPGKLDVEGRSVFHV-VTSKG-NLECLNAILIHGVDITTSDTAGRNALHLAAKYGH--ALCLQKLLQY 143
Cdd:PHA03095 132 PKVIRLLLRKGADVNALDLYGMTPLAVlLKSRNaNVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKprARIVRELIRA 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 144 NCPTEHADLQGRTALHDAAM-ADCPSS-IQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNR 221
Cdd:PHA03095 212 GCDPAATDMLGNTPLHSMATgSSCKRSlVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGN 291
|
170 180 190
....*....|....*....|....*....|
gi 1034591230 222 TALMLGCEYGCRDAVEVLIKNGADISLLDA 251
Cdd:PHA03095 292 TPLSLMVRNNNGRAVRAALAKNPSAETVAA 321
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
104-272 |
1.05e-18 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 88.47 E-value: 1.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 104 LNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAK 183
Cdd:COG0666 4 LLLLLLLLLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 184 DVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALGHDSSYYARIG 263
Cdd:COG0666 84 DDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAAN 163
|
....*....
gi 1034591230 264 DNLDILTLL 272
Cdd:COG0666 164 GNLEIVKLL 172
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
125-217 |
3.35e-18 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 80.93 E-value: 3.35e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 125 LHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHgASVNAKDvDGRTPLVLATQMSRPTICQ 204
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVK 78
|
90
....*....|...
gi 1034591230 205 LLIDRGADVNSRD 217
Cdd:pfam12796 79 LLLEKGADINVKD 91
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
92-184 |
3.36e-17 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 77.85 E-value: 3.36e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 92 FHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEhaDLQGRTALHDAAMADCPSSIQ 171
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNL--KDNGRTALHYAARSGHLEIVK 78
|
90
....*....|...
gi 1034591230 172 LLCDHGASVNAKD 184
Cdd:pfam12796 79 LLLEKGADINVKD 91
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
158-250 |
2.10e-16 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 75.54 E-value: 2.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 158 LHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRgADVNSRDkQNRTALMLGCEYGCRDAVE 237
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVK 78
|
90
....*....|...
gi 1034591230 238 VLIKNGADISLLD 250
Cdd:pfam12796 79 LLLEKGADINVKD 91
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
792-1434 |
1.57e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.41 E-value: 1.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 792 TQKYTEKKLEMEKLLLENDSLSKD--VSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENT 869
Cdd:TIGR02168 212 AERYKELKAELRELELALLVLRLEelREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 870 NLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHE 949
Cdd:TIGR02168 292 ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 950 AKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVS--FEECERKFKATEKELKD 1027
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEaeLKELQAELEELEEELEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1028 QLSEQTQKysvsEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKE 1107
Cdd:TIGR02168 452 LQEELERL----EEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1108 KL-VEENAKQTSEIL---AVQNLL-QKQHVPLEQVEALKKSLNG-------------TIENLKEELKSMQRCYEKEQ--- 1166
Cdd:TIGR02168 528 LIsVDEGYEAAIEAAlggRLQAVVvENLNAAKKAIAFLKQNELGrvtflpldsikgtEIQGNDREILKNIEGFLGVAkdl 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1167 -QTVTKLHQLLENQKNSSVP---LAEHLQIKEAFEKEVGII--------------------KASLREKEEESQNKMEEVS 1222
Cdd:TIGR02168 608 vKFDPKLRKALSYLLGGVLVvddLDNALELAKKLRPGYRIVtldgdlvrpggvitggsaktNSSILERRREIEELEEKIE 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1223 KLQSEVQNTKQALKKLETREV---VDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLH 1299
Cdd:TIGR02168 688 ELEEKIAELEKALAELRKELEeleEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELE 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1300 FSI-----------------EQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLt 1362
Cdd:TIGR02168 768 ERLeeaeeelaeaeaeieelEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQ- 846
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034591230 1363 ytsgnpTKRQSQLIDTLQHQVKSLEQQLADADRQHQEVIAIYRT-----HLLSAAQGHMDEDVQEALLQIIQMRQGL 1434
Cdd:TIGR02168 847 ------IEELSEDIESLAAEIEELEELIEELESELEALLNERASleealALLRSELEELSEELRELESKRSELRREL 917
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
709-1347 |
2.31e-15 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 81.61 E-value: 2.31e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 709 QVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKL 788
Cdd:TIGR04523 117 EQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 789 LDVTQKYTEKKLEMEKllleNDSLSKDVSRLEtvfvppekheKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSEN 868
Cdd:TIGR04523 197 LKLELLLSNLKKKIQK----NKSLESQISELK----------KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQ 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 869 TNLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKfedinqefvKIKDKNEILKRNLENTQNQIKAEYISLAEH 948
Cdd:TIGR04523 263 NKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQ---------KEQDWNKELKSELKNQEKKLEEIQNQISQN 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 949 EAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQ 1028
Cdd:TIGR04523 334 NKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQ 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1029 LSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKshemeraLSRKTDELNKQLKDLSQKYTEVKNVKEK 1108
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKN-------LDNTRESLETQLKVLSRSINKIKQNLEQ 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1109 LVEENAKQTSEILAVQNLlqkqhvpleqvealKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKnssvplae 1188
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEE--------------KKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLE-------- 544
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1189 hlqiKEAFEKEVGIIKASLrekEEESQNKMEEVSKLQSEVQNTKQALKKLETrevvDLSKYKATKSDLETQISSLNEKLA 1268
Cdd:TIGR04523 545 ----DELNKDDFELKKENL---EKEIDEKNKEIEELKQTQKSLKKKQEEKQE----LIDQKEKEKKDLIKEIEEKEKKIS 613
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034591230 1269 NLNRKYEEVCEEvlhaKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIeakdNKITELLND 1347
Cdd:TIGR04523 614 SLEKELEKAKKE----NEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKI----DDIIELMKD 684
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
650-1239 |
1.60e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 78.95 E-value: 1.60e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 650 EKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAqhvKPEEHEQVKSRLEQKSGELGKKITELT 729
Cdd:PRK03918 182 EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVK---ELEELKEEIEELEKELESLEGSKRKLE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 730 LKNQTLQKEIEKVYLDNKLLKEQAHNLtiemknhyvplkvsEDMKKSHDAIIddlnrKLLDVTQKYTEKKLEMEKLLlen 809
Cdd:PRK03918 259 EKIRELEERIEELKKEIEELEEKVKEL--------------KELKEKAEEYI-----KLSEFYEEYLDELREIEKRL--- 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 810 DSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCgEDQEKIHALTSENTNLKKMMSNQyvpvktheevk 889
Cdd:PRK03918 317 SRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERH-ELYEEAKAKKEELERLKKRLTGL----------- 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 890 mtlndTLAKTNRELLDVKKKFEDINQEFVKIKDKneilKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMrkVQDSNAEI 969
Cdd:PRK03918 385 -----TPEKLEKELEELEKAKEEIEEEISKITAR----IGELKKEIKELKKAIEELKKAKGKCPVCGREL--TEEHRKEL 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 970 LANYRKgqeEIvtlhAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFkATEKELKDQLSEQTQKYS-VSEEEVKKNKQ 1048
Cdd:PRK03918 454 LEEYTA---EL----KRIEKELKEIEEKERKLRKELRELEKVLKKESEL-IKLKELAEQLKELEEKLKkYNLEELEKKAE 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1049 ENDKLKKEIFTLQKDLRDktvlIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQ 1128
Cdd:PRK03918 526 EYEKLKEKLIKLKGEIKS----LKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFY 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1129 KQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLEnQKNSSVPLAEHLQIKEAF---EKEVGIIKA 1205
Cdd:PRK03918 602 NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELE-ELEKKYSEEEYEELREEYlelSRELAGLRA 680
|
570 580 590
....*....|....*....|....*....|....
gi 1034591230 1206 SLREKEEESQNKMEEVSKLQSEVQNTKQALKKLE 1239
Cdd:PRK03918 681 ELEELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
486-1293 |
1.71e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 79.41 E-value: 1.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 486 ELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKehltseaASGNHRLTEELKDQ 565
Cdd:PTZ00121 1167 EEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKK-------AEAVKKAEEAKKDA 1239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 566 LKDLKVKYEGASAEVGKLRN-QIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLA 644
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEaRMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADE 1319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 645 LSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKK 724
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKK 1399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 725 ITELTLKNQTLQKEIEKvyldnKLLKEQAHNLTIEMKnhyvplKVSEDMKKSHDAIIDDLNRKLLDVTQKYTE--KKLEM 802
Cdd:PTZ00121 1400 AEEDKKKADELKKAAAA-----KKKADEAKKKAEEKK------KADEAKKKAEEAKKADEAKKKAEEAKKAEEakKKAEE 1468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 803 EKLLLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNiVELKKQLSELKKkcGEDQEKIHALTSENTNLKKMMSNQYVPV 882
Cdd:PTZ00121 1469 AKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKA-AEAKKKADEAKK--AEEAKKADEAKKAEEAKKADEAKKAEEK 1545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 883 KTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKV 962
Cdd:PTZ00121 1546 KKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEEL 1625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 963 QDSNAEilanyRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEEcERKFKAteKELKDQLSEQTQKysvsEEE 1042
Cdd:PTZ00121 1626 KKAEEE-----KKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAE-EDKKKA--EEAKKAEEDEKKA----AEA 1693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1043 VKKNKQEndklKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKnvkeklVEENAKQTSEILA 1122
Cdd:PTZ00121 1694 LKKEAEE----AKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAK------KDEEEKKKIAHLK 1763
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1123 VQNLLQKQHVPLEQVEALKKSLNgtienlKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGI 1202
Cdd:PTZ00121 1764 KEEEKKAEEIRKEKEAVIEEELD------EEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVAD 1837
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1203 IKASLREKEEESQNKMEEVSKLQSEVQNTKQALKK--------LETREVVDLSKyKATKSDLETQISSLNEKLAN----- 1269
Cdd:PTZ00121 1838 SKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKekdlkeddEEEIEEADEIE-KIDKDDIEREIPNNNMAGKNndiid 1916
|
810 820 830
....*....|....*....|....*....|..
gi 1034591230 1270 --------LNRKYEEVCEEVLHAKKKEISAKD 1293
Cdd:PTZ00121 1917 dkldkdeyIKRDAEETREEIIKISKKDMCIND 1948
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
560-1160 |
8.68e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 76.64 E-value: 8.68e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 560 EELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEF---KRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQA 636
Cdd:PRK03918 203 EEVLREINEISSELPELREELEKLEKEVKELEELKEEIeelEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 637 KELsaklalsipaekfenmksslsNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLaqhvkpEEHEQVKSRLEQ 716
Cdd:PRK03918 283 KEL---------------------KELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEI------NGIEERIKELEE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 717 KSGELGkkitELTLKNQTLQKEIEKVYLDNKLLkEQAHNLTIEMKNHyvplkvsedMKKSHDAIIDDLNRKLLDVTQKYT 796
Cdd:PRK03918 336 KEERLE----ELKKKLKELEKRLEELEERHELY-EEAKAKKEELERL---------KKRLTGLTPEKLEKELEELEKAKE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 797 EKKLEMEKLllendslskdvsrletvfvppekhEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTnlKKMMS 876
Cdd:PRK03918 402 EIEEEISKI------------------------TARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHR--KELLE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 877 NQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDiNQEFVKIKDKNEILKrNLENTQNQIKAEYISLAEHEakmssls 956
Cdd:PRK03918 456 EYTAELKRIEKELKEIEEKERKLRKELRELEKVLKK-ESELIKLKELAEQLK-ELEEKLKKYNLEELEKKAEE------- 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 957 qsmrkvqdsnaeilanYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKyapivsfEECERKFKATEKELKDQLSEQTQKY 1036
Cdd:PRK03918 527 ----------------YEKLKEKLIKLKGEIKSLKKELEKLEELKKKL-------AELEKKLDELEEELAELLKELEELG 583
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1037 SVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKL-VEENAK 1115
Cdd:PRK03918 584 FESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYsEEEYEE 663
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 1034591230 1116 QTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQR 1160
Cdd:PRK03918 664 LREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
325-1157 |
1.09e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 1.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 325 DLKERLRKIQQeqRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEALKNRFKYFESDHLGSG 404
Cdd:TIGR02168 217 ELKAELRELEL--ALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 405 SHFSNRKEDMLLKQGQMYMADSQctspgipahmqsrsmlrPLELSLPSQTSYSENEILKKELEAMRTFCESAKQDRLKLQ 484
Cdd:TIGR02168 295 NEISRLEQQKQILRERLANLERQ-----------------LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 485 NELAHKVAECKALalecERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTseaasgnhRLTEELKD 564
Cdd:TIGR02168 358 AELEELEAELEEL----ESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE--------RLQQEIEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 565 QLKDLKvkyegasaevgklRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLA 644
Cdd:TIGR02168 426 LLKKLE-------------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 645 LsipAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIR---QLKRELENVKAKLAQHVKPEEHEQVKSRLE-QKSGE 720
Cdd:TIGR02168 493 S---LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdeGYEAAIEAALGGRLQAVVVENLNAAKKAIAfLKQNE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 721 LGKkiteLTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKK--SHDAIIDDLN-----RKLLD--- 790
Cdd:TIGR02168 570 LGR----VTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYllGGVLVVDDLDnalelAKKLRpgy 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 791 --VT--------------------QKYTEKKLEMEKLLLENDSLSKDVSRLETVFvppEKHEKEIIALKSNIVELKKQLS 848
Cdd:TIGR02168 646 riVTldgdlvrpggvitggsaktnSSILERRREIEELEEKIEELEEKIAELEKAL---AELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 849 ELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILK 928
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALR 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 929 RNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKY--- 1005
Cdd:TIGR02168 803 EALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLner 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1006 ----APIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDK-TVLIEKSHEMERA 1080
Cdd:TIGR02168 883 asleEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEySLTLEEAEALENK 962
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034591230 1081 LSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEilavQNLLQKQHvplEQVEALKKSLNGTIENLKEELKS 1157
Cdd:TIGR02168 963 IEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKER----YDFLTAQK---EDLTEAKETLEEAIEEIDREARE 1032
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
95-246 |
1.12e-13 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 76.06 E-value: 1.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 95 VTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLC 174
Cdd:PLN03192 532 VASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILY 611
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034591230 175 dHGASVNAKDVDGRTpLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADI 246
Cdd:PLN03192 612 -HFASISDPHAAGDL-LCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV 681
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
906-1400 |
2.21e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 75.10 E-value: 2.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 906 VKKKFEDINQEFVKIKDKNEILKRNLENtqnqIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHA 985
Cdd:PRK03918 198 KEKELEEVLREINEISSELPELREELEK----LEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKK 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 986 EIKAQKKELDTIQEcIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKkEIFTLQKDLR 1065
Cdd:PRK03918 274 EIEELEEKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-ELKKKLKELE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1066 DKTVLIEKSHE--------MERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQV 1137
Cdd:PRK03918 352 KRLEELEERHElyeeakakKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEEL 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1138 EA-------------------LKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEK 1198
Cdd:PRK03918 432 KKakgkcpvcgrelteehrkeLLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1199 EVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLEtrevvdlsKYKATKSDLETQISSLNEKLANLNRKYEEV- 1277
Cdd:PRK03918 512 LKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE--------ELKKKLAELEKKLDELEEELAELLKELEELg 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1278 --CEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELL-----NDVER 1350
Cdd:PRK03918 584 feSVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEE 663
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1351 LKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLADADRQHQEV 1400
Cdd:PRK03918 664 LREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKEL 713
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
502-1277 |
2.95e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.10 E-value: 2.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 502 ERVKEDSDEQIKQL-------EDALK--DVQKRMYESEGKVkqmqtHFLALKEHLTSEAASGNHRltEELKDQLKDLKVK 572
Cdd:TIGR02169 187 ERLDLIIDEKRQQLerlrrerEKAERyqALLKEKREYEGYE-----LLKEKEALERQKEAIERQL--ASLEEELEKLTEE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 573 YEGASAEVGKLRNQIKqnemivEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLA-LSIPAEK 651
Cdd:TIGR02169 260 ISELEKRLEEIEQLLE------ELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAkLEAEIDK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 652 FENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVkpEEHEQVKSRLEQKSGELGKKITELTLK 731
Cdd:TIGR02169 334 LLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETR--DELKDYREKLEKLKREINELKRELDRL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 732 NQTLQK-EIEKVYLDNKL--LKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLE 808
Cdd:TIGR02169 412 QEELQRlSEELADLNAAIagIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRE 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 809 NDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKC--------------------GEDQEKIHALTSEN 868
Cdd:TIGR02169 492 LAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYataievaagnrlnnvvveddAVAKEAIELLKRRK 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 869 TN------LKKMMSNQYVPVKTHEE-------------------VKMTLNDTLA----KTNRELLD-------------- 905
Cdd:TIGR02169 572 AGratflpLNKMRDERRDLSILSEDgvigfavdlvefdpkyepaFKYVFGDTLVvediEAARRLMGkyrmvtlegelfek 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 906 --------VKKKFEDINQefVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQ 977
Cdd:TIGR02169 652 sgamtggsRAPRGGILFS--RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLE 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 978 EEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYsvSEEEVKKNKQENDKLKKEI 1057
Cdd:TIGR02169 730 QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEV 807
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1058 FTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLsqkyTEVKNVKEKLVEENAKQTSEILAVqnlLQKQHVPLEQV 1137
Cdd:TIGR02169 808 SRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDL----KEQIKSIEKEIENLNGKKEELEEE---LEELEAALRDL 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1138 EALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSsvplaehlqiKEAFEKEVGIIKASLREKEEESQNK 1217
Cdd:TIGR02169 881 ESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAK----------LEALEEELSEIEDPKGEDEEIPEEE 950
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1218 MEEvSKLQSEVQNTKQALKKLET----------REVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEV 1277
Cdd:TIGR02169 951 LSL-EDVQAELQRVEEEIRALEPvnmlaiqeyeEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
646-1350 |
3.09e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.18 E-value: 3.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 646 SIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKI 725
Cdd:PTZ00121 1075 SYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRV 1154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 726 TELTLKNQTLQKEIEKVYLDNKllKEQAHNLTIEMKNHYvPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKL 805
Cdd:PTZ00121 1155 EIARKAEDARKAEEARKAEDAK--KAEAARKAEEVRKAE-ELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKK 1231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 806 LLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNlkkmmsnqyvpvKTH 885
Cdd:PTZ00121 1232 AEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAK------------KAE 1299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 886 EEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAeyislAEHEAKMSSLSQSMRKVQDS 965
Cdd:PTZ00121 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEA-----AADEAEAAEEKAEAAEKKKE 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 966 NAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEK--ELKDQLSEQTQKYSVSEEEV 1043
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKadEAKKKAEEAKKADEAKKKAE 1454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1044 KKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERA---LSRKTDELNKQlKDLSQKYTEVKNVKEKLVEENAKQTSEI 1120
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKaeeAKKKADEAKKA-AEAKKKADEAKKAEEAKKADEAKKAEEA 1533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1121 LAVQNLLQKQHV----PLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAF 1196
Cdd:PTZ00121 1534 KKADEAKKAEEKkkadELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK 1613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1197 EKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEE 1276
Cdd:PTZ00121 1614 KAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEA 1693
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 1277 VCEEVLHAKKKEISAKDEKELLHfSIEQEIKDQKERCDKS--LTTITELQRRIQESAKQIEAKDNKITELLNDVER 1350
Cdd:PTZ00121 1694 LKKEAEEAKKAEELKKKEAEEKK-KAEELKKAEEENKIKAeeAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEK 1768
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
540-1337 |
3.20e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.18 E-value: 3.20e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 540 FLALKEHLTSEAASGNHRLTEELKdQLKDLKVKYEGASAEVGKLRNQIKQNEmivEEFKRDEGKLIEENKRLQKELSMCE 619
Cdd:PTZ00121 1081 FDAKEDNRADEATEEAFGKAEEAK-KTETGKAEEARKAEEAKKKAEDARKAE---EARKAEDARKAEEARKAEDAKRVEI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 620 MEREKKGRKVTEMEG--QAKELSAklalsipAEKFENMKSSLSNEVNEKAKKLVEMER-EHEKSLSEIRQLKRELENVKA 696
Cdd:PTZ00121 1157 ARKAEDARKAEEARKaeDAKKAEA-------ARKAEEVRKAEELRKAEDARKAEAARKaEEERKAEEARKAEDAKKAEAV 1229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 697 KLAQHVKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEI--EKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMK 774
Cdd:PTZ00121 1230 KKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIkaEEARKADELKKAEEKKKADEAKKAEEKKKADEAKK 1309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 775 KSHDAiiddlnRKLLDVTQKYTEKKLEMEKLLLENDSLSKdvsRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKC 854
Cdd:PTZ00121 1310 KAEEA------KKADEAKKKAEEAKKKADAAKKKAEEAKK---AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKA 1380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 855 GEDQEKIHALTSENTNLKKMMSNQyvpvKTHEEVKMTlndtlAKTNRELLDVKKKFEDinqefvkiKDKNEILKRNLENT 934
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDK----KKADELKKA-----AAAKKKADEAKKKAEE--------KKKADEAKKKAEEA 1443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 935 QnqiKAEYISLAEHEAKMSSlsqsmrkvqdsNAEILANYRKGQEEIVTlHAEIKAQKKELDTIQECIKVKYApivsfeec 1014
Cdd:PTZ00121 1444 K---KADEAKKKAEEAKKAE-----------EAKKKAEEAKKADEAKK-KAEEAKKADEAKKKAEEAKKKAD-------- 1500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1015 ERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKd 1094
Cdd:PTZ00121 1501 EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMA- 1579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1095 lSQKYTEVKNVKEKLVEENAKQTSEILAVQ-NLLQKQHVPLEQVEALKKSlngtienlKEELKSMQRCYEKEQQTVTKLH 1173
Cdd:PTZ00121 1580 -LRKAEEAKKAEEARIEEVMKLYEEEKKMKaEEAKKAEEAKIKAEELKKA--------EEEKKKVEQLKKKEAEEKKKAE 1650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1174 QLLENQKNSSVPlAEHLQIKEAFEKEvgiiKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATK 1253
Cdd:PTZ00121 1651 ELKKAEEENKIK-AAEEAKKAEEDKK----KAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAE 1725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1254 SDLETQISSLNEKLANLNRKYEEvceevlhAKKKEisaKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQ 1333
Cdd:PTZ00121 1726 EENKIKAEEAKKEAEEDKKKAEE-------AKKDE---EEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRME 1795
|
....
gi 1034591230 1334 IEAK 1337
Cdd:PTZ00121 1796 VDKK 1799
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
65-265 |
4.15e-13 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 73.52 E-value: 4.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 65 GDVEKVTSILAKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILI-HGVDITTSDTAGRNALH--LAAKYGHALCLQKLL 141
Cdd:PHA03095 60 EKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIkAGADVNAKDKVGRTPLHvyLSGFNINPKVIRLLL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 142 QYNCPTEHADLQGRTALH------DAamadCPSSIQLLCDHGASVNAKDVDGRTPL--VLATQMSRPTICQLLIDRGADV 213
Cdd:PHA03095 140 RKGADVNALDLYGMTPLAvllksrNA----NVELLRLLIDAGADVYAVDDRFRSLLhhHLQSFKPRARIVRELIRAGCDP 215
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 214 NSRDKQNRTALMLGCEYG-CRDA-VEVLIKNGADISLLDALGHDSSYYARIGDN 265
Cdd:PHA03095 216 AATDMLGNTPLHSMATGSsCKRSlVLPLLIAGISINARNRYGQTPLHYAAVFNN 269
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
571-1349 |
8.21e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.56 E-value: 8.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 571 VKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKG----RKVTEMEGQAKELSAKLA-L 645
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGyellKEKEALERQKEAIERQLAsL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 646 SIPAEKFENMKSSLSNEVNEKAKKLVEMERE-HEKSLSEIRQLKRELENVKAKLAQHV-KPEEHEQVKSRLEQKSGELGK 723
Cdd:TIGR02169 250 EEELEKLTEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLErSIAEKERELEDAEERLAKLEA 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 724 KITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLK-VSEDMKKSHDAIiDDLNRKLLDVTQKYTEKKLEM 802
Cdd:TIGR02169 330 EIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEeVDKEFAETRDEL-KDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 803 EKLLLENDSLSKDVSRletvfvppekHEKEIIALKSNIVELKKQLSELkkkcgedQEKIHALTSENTNLKKMMSNQYVPV 882
Cdd:TIGR02169 409 DRLQEELQRLSEELAD----------LNAAIAGIEAKINELEEEKEDK-------ALEIKKQEWKLEQLAADLSKYEQEL 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 883 KTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIkAEYISLAEHEAKMSSLSQSMR-- 960
Cdd:TIGR02169 472 YDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTV-AQLGSVGERYATAIEVAAGNRln 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 961 -------KVQDSNAEILANYRKGQEEIVTLHaEIKAQKKELDTIQECIKVKYApiVSFEECERKFkatekelkdqlsEQT 1033
Cdd:TIGR02169 551 nvvveddAVAKEAIELLKRRKAGRATFLPLN-KMRDERRDLSILSEDGVIGFA--VDLVEFDPKY------------EPA 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1034 QKYSVSEEEVKKNKQENDKL--KKEIFTLQKDLRDKTVLIEKSH--------------EMERALSRKTDELNKQLKDLSQ 1097
Cdd:TIGR02169 616 FKYVFGDTLVVEDIEAARRLmgKYRMVTLEGELFEKSGAMTGGSraprggilfsrsepAELQRLRERLEGLKRELSSLQS 695
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1098 KYTEVKN-VKEKL--VEENAKQTSEILAVQNLLQKQHVP----LEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVT 1170
Cdd:TIGR02169 696 ELRRIENrLDELSqeLSDASRKIGEIEKEIEQLEQEEEKlkerLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLH 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1171 KLHQLLEN--QKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREvvdlSK 1248
Cdd:TIGR02169 776 KLEEALNDleARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQI----KS 851
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1249 YKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKEllhfSIEQEIKDQKERCDKSLTTITELQRRIQ 1328
Cdd:TIGR02169 852 IEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLR----ELERKIEELEAQIEKKRKRLSELKAKLE 927
|
810 820
....*....|....*....|.
gi 1034591230 1329 ESAKQIEAKDNKITELLNDVE 1349
Cdd:TIGR02169 928 ALEEELSEIEDPKGEDEEIPE 948
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
328-1160 |
1.03e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.17 E-value: 1.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 328 ERLRKIQQEQRilldkvnglQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEALknrfkyfESDHLGSGSHF 407
Cdd:TIGR02168 213 ERYKELKAELR---------ELELALLVLRLEELREELEELQEELKEAEEELEELTAELQEL-------EEKLEELRLEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 408 SNRKEDMLLKQGQMYMADSQCT--SPGIPAHMQSRSMLR--PLELSLPSQTSYSENEILKKELEAMRTFCESAKQDRLKL 483
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISrlEQQKQILRERLANLErqLEELEAQLEELESKLDELAEELAELEEKLEELKEELESL 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 484 QNELAHKVAECKALalecERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTseaasgnhRLTEELK 563
Cdd:TIGR02168 357 EAELEELEAELEEL----ESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE--------RLQQEIE 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 564 DQLKDLKvkyegasaevgklRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKL 643
Cdd:TIGR02168 425 ELLKKLE-------------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARL 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 644 ALsipAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIR---QLKRELENVKAKLAQHVKPEEHEQVKSRLE-QKSG 719
Cdd:TIGR02168 492 DS---LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdeGYEAAIEAALGGRLQAVVVENLNAAKKAIAfLKQN 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 720 ELGKkiteLTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKK--SHDAIIDDLnrklldvtqkytE 797
Cdd:TIGR02168 569 ELGR----VTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYllGGVLVVDDL------------D 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 798 KKLEMEKLLLENDSL-SKDVSRLETVFVPPEKHEKEiialKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMS 876
Cdd:TIGR02168 633 NALELAKKLRPGYRIvTLDGDLVRPGGVITGGSAKT----NSSILERRREIEELEEKIEELEEKIAELEKALAELRKELE 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 877 NQyvpvkthEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKA-------EYISLAEHE 949
Cdd:TIGR02168 709 EL-------EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEleerleeAEEELAEAE 781
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 950 AKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQL 1029
Cdd:TIGR02168 782 AEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEI 861
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1030 SEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVK----NV 1105
Cdd:TIGR02168 862 EELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEvridNL 941
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 1034591230 1106 KEKLVEEnakqtseilavqnllqkQHVPLEQVEALKKSLNGTIENLKEELKSMQR 1160
Cdd:TIGR02168 942 QERLSEE-----------------YSLTLEEAEALENKIEDDEEEARRRLKRLEN 979
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
68-255 |
2.32e-12 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 70.76 E-value: 2.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 68 EKVTSILaKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPT 147
Cdd:PHA02874 105 DMIKTIL-DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 148 EHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTIcQLLIDrGADVNSRDKQNRTALMLG 227
Cdd:PHA02874 184 NVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAI-ELLIN-NASINDQDIDGSTPLHHA 261
|
170 180
....*....|....*....|....*....
gi 1034591230 228 CEYGC-RDAVEVLIKNGADISLLDALGHD 255
Cdd:PHA02874 262 INPPCdIDIIDILLYHKADISIKDNKGEN 290
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
480-1024 |
2.45e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 72.02 E-value: 2.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 480 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEaasgnhRLT 559
Cdd:PRK03918 229 EVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLS------EFY 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 560 EELKDQLKDLKVKYEGASAEVGKLRNQIKQnemiVEEFKRDEGKLIEENKRLQKELSMCEmEREKKGRKVTEMEGQAKEL 639
Cdd:PRK03918 303 EEYLDELREIEKRLSRLEEEINGIEERIKE----LEEKEERLEELKKKLKELEKRLEELE-ERHELYEEAKAKKEELERL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 640 SAKLAlSIPAEKFENMKSSLSN---EVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAK---LAQHVKPEEHEQVKSR 713
Cdd:PRK03918 378 KKRLT-GLTPEKLEKELEELEKakeEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvCGRELTEEHRKELLEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 714 LEQKSGELGKKITELTLKNQTLQKEIEKVylDNKLLKEQAhnlTIEMKNHYVPLKVSEDMKKSHDAiiddlnrklldvtQ 793
Cdd:PRK03918 457 YTAELKRIEKELKEIEEKERKLRKELREL--EKVLKKESE---LIKLKELAEQLKELEEKLKKYNL-------------E 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 794 KYTEKKLEMEKLLLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQ-EKIHALTSENTNLK 872
Cdd:PRK03918 519 ELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELE 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 873 KMMsNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNL-ENTQNQIKAEYISLAEHEAK 951
Cdd:PRK03918 599 PFY-NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYsEEEYEELREEYLELSRELAG 677
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034591230 952 MSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQEcikvkyapivsFEECERKFKATEKE 1024
Cdd:PRK03918 678 LRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEE-----------LREKVKKYKALLKE 739
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
510-1306 |
6.54e-12 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 70.85 E-value: 6.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 510 EQIKQLEDALKDVQKRMYESegKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQ 589
Cdd:TIGR01612 974 DKINELDKAFKDASLNDYEA--KNNELIKYFNDLKANLGKNKENMLYHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHT 1051
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 590 NEM-IVEEFKRDEGKLIEE-NKRLQKE--LSMCEMEREKKGRKVTEMEGQAKELSAKLALSIpaEKFENMKSSLSNEVNE 665
Cdd:TIGR01612 1052 SIYnIIDEIEKEIGKNIELlNKEILEEaeINITNFNEIKEKLKHYNFDDFGKEENIKYADEI--NKIKDDIKNLDQKIDH 1129
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 666 KAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQ----VKSRLEQKSG---ELGKKITELTL--KNQTLQ 736
Cdd:TIGR01612 1130 HIKALEEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEEIEKkienIVTKIDKKKNiydEIKKLLNEIAEieKDKTSL 1209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 737 KEIEKVYLD-----NKLLKEQAHnltiEMKnhyvplKVSEDMKKSHDAIIDDLNrkllDVTQKYTEKKLEMEKLLLENds 811
Cdd:TIGR01612 1210 EEVKGINLSygknlGKLFLEKID----EEK------KKSEHMIKAMEAYIEDLD----EIKEKSPEIENEMGIEMDIK-- 1273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 812 lskdvSRLETVFVPPEKHEKEIIALKSNivelKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEEVKMT 891
Cdd:TIGR01612 1274 -----AEMETFNISHDDDKDHHIISKKH----DENISDIREKSLKIIEDFSEESDINDIKKELQKNLLDAQKHNSDINLY 1344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 892 LNDTLAKTN-RELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKA--EYISLAEHEAKMSSLSQSmrkvQDSNaE 968
Cdd:TIGR01612 1345 LNEIANIYNiLKLNKIKKIIDEVKEYTKEIEENNKNIKDELDKSEKLIKKikDDINLEECKSKIESTLDD----KDID-E 1419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 969 ILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIvsfEECERKFKATEKELKD-----------QLSEQTQKYS 1037
Cdd:TIGR01612 1420 CIKKIKELKNHILSEESNIDTYFKNADENNENVLLLFKNI---EMADNKSQHILKIKKDnatndhdfninELKEHIDKSK 1496
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1038 VSEEEVKKNKQENDKlKKEIFTLQKdlRDKTVLIEKSHEMEralsrKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQT 1117
Cdd:TIGR01612 1497 GCKDEADKNAKAIEK-NKELFEQYK--KDVTELLNKYSALA-----IKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSE 1568
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1118 SEIlavqNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQrcyekeqqtvTKLHQLLENQKNSSVPLAEhlqiKEAFE 1197
Cdd:TIGR01612 1569 QKI----KEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFE----------NKFLKISDIKKKINDCLKE----TESIE 1630
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1198 KEVGIIkaSLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETRevvdlskyKATKSDLETQISSLNEKLANLNRKYE-- 1275
Cdd:TIGR01612 1631 KKISSF--SIDSQDTELKENGDNLNSLQEFLESLKDQKKNIEDK--------KKELDELDSEIEKIEIDVDQHKKNYEig 1700
|
810 820 830
....*....|....*....|....*....|...
gi 1034591230 1276 --EVCEEVLHAKKKEISAKdeKELLHFSIEQEI 1306
Cdd:TIGR01612 1701 iiEKIKEIAIANKEEIESI--KELIEPTIENLI 1731
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
674-1353 |
6.63e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 70.43 E-value: 6.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 674 EREHEKSLSEIRQLKRELENVKAKLAQHVKPE-EHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQ 752
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLnKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 753 AHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLldvtqkyTEKKLEMEKLLLENDSLSKDVSRLETVFvppEKHEKE 832
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEI-------KKKEKELEKLNNKYNDLKKQKEELENEL---NLLEKE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 833 IIALKSNIVELKKQLSELKKKCGEDQEKIH---ALTSENTNLKKMMSNqyvpvktheevkmtLNDTLAKTNRELLDVKKK 909
Cdd:TIGR04523 182 KLNIQKNIDKIKNKLLKLELLLSNLKKKIQknkSLESQISELKKQNNQ--------------LKDNIEKKQQEINEKTTE 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 910 FEDINQEFVKIKDKNEILKRNLENTQNQIKaeyislaEHEAKMSSLSQsmrKVQDSNAEILA-NYRKGQEEIVTLHAEIK 988
Cdd:TIGR04523 248 ISNTQTQLNQLKDEQNKIKKQLSEKQKELE-------QNNKKIKELEK---QLNQLKSEISDlNNQKEQDWNKELKSELK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 989 AQKKELDTIQECIKVKYAPIVSFEECERKFKATEK-------ELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQ 1061
Cdd:TIGR04523 318 NQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTnsesensEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1062 KDLRDKTVLiekshemeralsrkTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEIlavQNLLQKQHVpleqVEALK 1141
Cdd:TIGR04523 398 SKIQNQEKL--------------NQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEI---KDLTNQDSV----KELII 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1142 KSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNkmeEV 1221
Cdd:TIGR04523 457 KNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLES---EK 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1222 SKLQSEVQNTKQALKKLETRevvdlskykATKSDLETQISSLNEKLanlnrkyeevcEEVLHAKKKEISAKDEKELLHFS 1301
Cdd:TIGR04523 534 KEKESKISDLEDELNKDDFE---------LKKENLEKEIDEKNKEI-----------EELKQTQKSLKKKQEEKQELIDQ 593
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 1034591230 1302 IEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQ 1353
Cdd:TIGR04523 594 KEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
7-290 |
1.25e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 69.32 E-value: 1.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 7 IILNVSCISCVLGRFYNSALLMKLAQKGEGNLECNWKISDHAADWNKyddrLMKAAERGDVEKVTSILAKKGVNPGKLDV 86
Cdd:PHA02876 101 IILDIKYASIILNKHKLDEACIHILKEAISGNDIHYDKINESIEYMK----LIKERIQQDELLIAEMLLEGGADVNAKDI 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 87 EGRSVFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDaamADC 166
Cdd:PHA02876 177 YCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRN---EDL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 167 PSSIqLLCDHGASVNAKDVDGRTPLVLATQMsrPTICQL---LIDRGADVNSRDKQNRTALMLGCEYGC-RDAVEVLIKN 242
Cdd:PHA02876 254 ETSL-LLYDAGFSVNSIDDCKNTPLHHASQA--PSLSRLvpkLLERGADVNAKNIKGETPLYLMAKNGYdTENIRTLIML 330
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1034591230 243 GADISLLDALGHDSSYYARIGD-NLDILTLLKTASENTNkGRELWKKGP 290
Cdd:PHA02876 331 GADVNAADRLYITPLHQASTLDrNKDIVITLLELGANVN-ARDYCDKTP 378
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
462-1231 |
3.09e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.22 E-value: 3.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 462 LKKELEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDEQIKQLedalkdvQKRMYESEGKVKQMQTHFL 541
Cdd:pfam15921 122 MQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQL-------RKMMLSHEGVLQEIRSILV 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 542 ALKEHLTSEAASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIE-----ENKRLQKELS 616
Cdd:pfam15921 195 DFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIElllqqHQDRIEQLIS 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 617 MCEMEREKKGRKVTEMEGQAKELSAKLalsipaekfENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKA 696
Cdd:pfam15921 275 EHEVEITGLTEKASSARSQANSIQSQL---------EIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIE 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 697 KLAQHVKPEEHEQVKSRLE-----QKSGELGKKITELTLKNQTLQKEIEkvyldnkLLKEQAHNLTiemknhyvplkvse 771
Cdd:pfam15921 346 ELEKQLVLANSELTEARTErdqfsQESGNLDDQLQKLLADLHKREKELS-------LEKEQNKRLW-------------- 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 772 DMKKSHDAIIDDLNRKLldvtqkytekklemeklllenDSLSKDVSRLETVfvppekhekeIIALKSNIV-ELKKQLSEL 850
Cdd:pfam15921 405 DRDTGNSITIDHLRREL---------------------DDRNMEVQRLEAL----------LKAMKSECQgQMERQMAAI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 851 KKKcGEDQEKIHALTSENTNLKKMMSnqyvpvKTHEEV---KMTLND---TLAKTNRELLDVKKKFEDINQEFVKIKDKN 924
Cdd:pfam15921 454 QGK-NESLEKVSSLTAQLESTKEMLR------KVVEELtakKMTLESserTVSDLTASLQEKERAIEATNAEITKLRSRV 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 925 EILKRNLENTQNQikAEYISLAEHEAKMSSLSQSMRkvqDSNAEILANYRKGQEEIVTLHAEIK-AQKKELDTIQECIKV 1003
Cdd:pfam15921 527 DLKLQELQHLKNE--GDHLRNVQTECEALKLQMAEK---DKVIEILRQQIENMTQLVGQHGRTAgAMQVEKAQLEKEIND 601
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1004 KYAPIVSFEECERKFKATEKELKDQLS----EQTQKYSVSEEE---VKKNKQENDKLKKEIFTLQKDLRDKTVLIE---- 1072
Cdd:pfam15921 602 RRLELQEFKILKDKKDAKIRELEARVSdlelEKVKLVNAGSERlraVKDIKQERDQLLNEVKTSRNELNSLSEDYEvlkr 681
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1073 ----KSHEMERAlsrkTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHvplEQVEALKKSlngtI 1148
Cdd:pfam15921 682 nfrnKSEEMETT----TNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKR---GQIDALQSK----I 750
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1149 ENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEK---------EVGIIKASLREKEEESQNKME 1219
Cdd:pfam15921 751 QFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERrlkekvanmEVALDKASLQFAECQDIIQRQ 830
|
810
....*....|..
gi 1034591230 1220 EVSKLQSEVQNT 1231
Cdd:pfam15921 831 EQESVRLKLQHT 842
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
66-214 |
4.62e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 66.61 E-value: 4.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 66 DVEKVTSILAKKGVNPGKLDVEGRSVFHV--VTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHA------LCL 137
Cdd:PHA03100 84 DVKEIVKLLLEYGANVNAPDNNGITPLLYaiSKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlkilkLLI 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 138 QK------------LLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQL 205
Cdd:PHA03100 164 DKgvdinaknrvnyLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKL 243
|
....*....
gi 1034591230 206 LIDRGADVN 214
Cdd:PHA03100 244 LLNNGPSIK 252
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
502-1339 |
6.90e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.45 E-value: 6.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 502 ERVKEDSDEQIKqledalkDVQKRMYES------------------EGKVKQMQTHFLALKEHLTSEAASgnhrlTEELK 563
Cdd:pfam15921 77 ERVLEEYSHQVK-------DLQRRLNESnelhekqkfylrqsvidlQTKLQEMQMERDAMADIRRRESQS-----QEDLR 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 564 DQLKDLKVKYEGA-SAEVGKLRNQIKQNEMIVEEFKRDEGKlieenkrLQKELSMCEMEREKKGRKVTEMEgqakelsak 642
Cdd:pfam15921 145 NQLQNTVHELEAAkCLKEDMLEDSNTQIEQLRKMMLSHEGV-------LQEIRSILVDFEEASGKKIYEHD--------- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 643 lalSIPAEKFENMKSSLSnevnekaKKLVEMEREHEKSLSEIRQLKRELENVKAKlAQHVKPEEHEQVKSRLEQKSGELG 722
Cdd:pfam15921 209 ---SMSTMHFRSLGSAIS-------KILRELDTEISYLKGRIFPVEDQLEALKSE-SQNKIELLLQQHQDRIEQLISEHE 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 723 KKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVS--------EDMKKSHDAIIDDLNRKLLDVTQK 794
Cdd:pfam15921 278 VEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTvsqlrselREAKRMYEDKIEELEKQLVLANSE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 795 YTEKKLEMEKLLLENDSLSkdvSRLETVFVPPEKHEKEIialksnivelkkQLSELKKKCGEDQEKIHALTSEntNLKKM 874
Cdd:pfam15921 358 LTEARTERDQFSQESGNLD---DQLQKLLADLHKREKEL------------SLEKEQNKRLWDRDTGNSITID--HLRRE 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 875 MSNQYVPVKTHEEVKMTL-NDTLAKTNRELLDVKKK---FEDINQEFVKIKDKNEILKRNLEntqnQIKAEYISLAEHEA 950
Cdd:pfam15921 421 LDDRNMEVQRLEALLKAMkSECQGQMERQMAAIQGKnesLEKVSSLTAQLESTKEMLRKVVE----ELTAKKMTLESSER 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 951 KMSSLSQSM----RKVQDSNAEIlanyRKGQEEIVTLHAEIKAQKKELDTIQECIKvkyapivsfeECER-KFKATEKE- 1024
Cdd:pfam15921 497 TVSDLTASLqekeRAIEATNAEI----TKLRSRVDLKLQELQHLKNEGDHLRNVQT----------ECEAlKLQMAEKDk 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1025 ----LKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDL----S 1096
Cdd:pfam15921 563 vieiLRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLvnagS 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1097 QKYTEVKNVKE---KLVEENAKQTSEIlavQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKlh 1173
Cdd:pfam15921 643 ERLRAVKDIKQerdQLLNEVKTSRNEL---NSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKS-- 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1174 qlLENQKNSSVPLAEHLQIK-EAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREvvdlSKYKAT 1252
Cdd:pfam15921 718 --MEGSDGHAMKVAMGMQKQiTAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEK----NKMAGE 791
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1253 KSDLETQISSLNEKLANLNRKYEEVCEEVlhAKKKEISAKDEKELLHFSIEQEIkDQKERCDKSLTTITELQRRIQESAK 1332
Cdd:pfam15921 792 LEVLRSQERRLKEKVANMEVALDKASLQF--AECQDIIQRQEQESVRLKLQHTL-DVKELQGPGYTSNSSMKPRLLQPAS 868
|
....*..
gi 1034591230 1333 QIEAKDN 1339
Cdd:pfam15921 869 FTRTHSN 875
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
37-256 |
7.89e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 66.63 E-value: 7.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 37 NLECNWKISDHAADWNKYDD----RLMKAAERGDVEKVTSILAKKGVNPGKLDVEGRSVFHVVTSKG-NLECLNAILIHG 111
Cdd:PHA02876 252 DLETSLLLYDAGFSVNSIDDckntPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGyDTENIRTLIMLG 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 112 VDITTSDTAGRNALHLAAKYG-HALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTP 190
Cdd:PHA02876 332 ADVNAADRLYITPLHQASTLDrNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTA 411
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034591230 191 LVLATQMSRP-TICQLLIDRGADVNSRDKQNRTALMLGCEYGCR-DAVEVLIKNGADIS---------LLDALGHDS 256
Cdd:PHA02876 412 LHFALCGTNPyMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKlDVIEMLLDNGADVNainiqnqypLLIALEYHG 488
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
509-1322 |
1.49e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 65.81 E-value: 1.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 509 DEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSeaasgnhrlteeLKDQLKDLKvkyegasAEVGKLRNQIK 588
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINN------------SNNKIKILE-------QQIKDLNDKLK 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 589 QNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLalsipaEKFENMKSSLSNEVNEKAK 668
Cdd:TIGR04523 93 KNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEI------KKKEKELEKLNNKYNDLKK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 669 KLVEMEREHEKSLSEIRQLKRELENVKAKLAqhvKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKvyldnkl 748
Cdd:TIGR04523 167 QKEELENELNLLEKEKLNIQKNIDKIKNKLL---KLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEK------- 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 749 LKEQAHNLTIEMKNHYVPLKvseDMKKSHDAIIDDLNRKLLDVTQkyTEKKLemeklllenDSLSKDVSRLETVF--VPP 826
Cdd:TIGR04523 237 KQQEINEKTTEISNTQTQLN---QLKDEQNKIKKQLSEKQKELEQ--NNKKI---------KELEKQLNQLKSEIsdLNN 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 827 EKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNqyvpvktheevkmtLNDTLAKTNRELLDV 906
Cdd:TIGR04523 303 QKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTN--------------SESENSEKQRELEEK 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 907 KKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQsmrkvqdsnaeilaNYRKGQEEIVTLHAE 986
Cdd:TIGR04523 369 QNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQ--------------EKELLEKEIERLKET 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 987 IKAQKKELDTIQECIKVKyapivsfeecerkfKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLrd 1066
Cdd:TIGR04523 435 IIKNNSEIKDLTNQDSVK--------------ELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKEL-- 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1067 ktvliekshemeRALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPL--EQVEALKKSL 1144
Cdd:TIGR04523 499 ------------KKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELkkENLEKEIDEK 566
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1145 NGTIENLKEELKSMQRCYEKEQQtvtKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKL 1224
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKQE---LIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKL 643
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1225 QSEVQNTKQALKKLetrevvdlskyKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELL------ 1298
Cdd:TIGR04523 644 KQEVKQIKETIKEI-----------RNKWPEIIKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIRIKDLpkleek 712
|
810 820
....*....|....*....|....
gi 1034591230 1299 HFSIEQEIKDQKErCDKSLTTITE 1322
Cdd:TIGR04523 713 YKEIEKELKKLDE-FSKELENIIK 735
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
38-281 |
1.73e-10 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 64.98 E-value: 1.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 38 LECNWKISDHAADWNKYddrLMKAAERGDVEKVTSILaKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILIHGVDITTS 117
Cdd:PHA02874 111 LDCGIDVNIKDAELKTF---LHYAIKKGDLESIKMLF-EYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 118 DTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADcPSSIQLLCDHgASVNAKDVDGRTPLVLATQM 197
Cdd:PHA02874 187 DNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN-RSAIELLINN-ASINDQDIDGSTPLHHAINP 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 198 S-RPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAV-------EVLIKNGADISLLDALGHDSsyyarIGDNLDIL 269
Cdd:PHA02874 265 PcDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVikdiianAVLIKEADKLKDSDFLEHIE-----IKDNKEFS 339
|
250
....*....|..
gi 1034591230 270 TLLKTASENTNK 281
Cdd:PHA02874 340 DFIKECNEEIED 351
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
650-1396 |
1.90e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 65.91 E-value: 1.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 650 EKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQlkrELENVKAKLAQHVKPEEHEQVKSRLEQKSGElgkkitelT 729
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQ---SVIDLQTKLQEMQMERDAMADIRRRESQSQE--------D 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 730 LKNQtLQKEIEKVYLdNKLLKEQAhnltieMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKklemeklLLEN 809
Cdd:pfam15921 143 LRNQ-LQNTVHELEA-AKCLKEDM------LEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKK-------IYEH 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 810 DSLSKdvsrletvfvppeKHEKEIIALKSNIV-ELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQyvpvktHEEv 888
Cdd:pfam15921 208 DSMST-------------MHFRSLGSAISKILrELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQ------HQD- 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 889 kmTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKrnlENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAE 968
Cdd:pfam15921 268 --RIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQ---EQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYED 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 969 ILANYRKgqeEIVTLHAEIKAQKKELDtiqecikvkyapivsfeecerKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQ 1048
Cdd:pfam15921 343 KIEELEK---QLVLANSELTEARTERD---------------------QFSQESGNLDDQLQKLLADLHKREKELSLEKE 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1049 ENDKL-------KKEIFTLQKDLRDKTVLIEKsheMERALSRKTDELNKQLKdlsQKYTEVKNVKEKLvEENAKQTSEIL 1121
Cdd:pfam15921 399 QNKRLwdrdtgnSITIDHLRRELDDRNMEVQR---LEALLKAMKSECQGQME---RQMAAIQGKNESL-EKVSSLTAQLE 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1122 AVQNLLQKQhvpLEQVEALKKSLNG---TIENLKEELKSMQRCYEKEQQTVTKLH-------QLLENQKNSsvplAEHLQ 1191
Cdd:pfam15921 472 STKEMLRKV---VEELTAKKMTLESserTVSDLTASLQEKERAIEATNAEITKLRsrvdlklQELQHLKNE----GDHLR 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1192 IKEAfekEVGIIKASLREKE---EESQNKMEEVSKLQSE-------VQNTKQALKKLETREVVDLSKYKATKSDLETQIS 1261
Cdd:pfam15921 545 NVQT---ECEALKLQMAEKDkviEILRQQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIR 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1262 SLNEKLANLNRKyeevceevlhaKKKEISAKDEKELLHFSIEQE---IKDQKERCDKSLTTITE----LQRRIQESAKQI 1334
Cdd:pfam15921 622 ELEARVSDLELE-----------KVKLVNAGSERLRAVKDIKQErdqLLNEVKTSRNELNSLSEdyevLKRNFRNKSEEM 690
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034591230 1335 EAKDNKITELLNDVE-RLKQALNGLSQLTYTSGNPTK----RQSQL------IDTLQHQVKSLEQQLADADRQ 1396
Cdd:pfam15921 691 ETTTNKLKMQLKSAQsELEQTRNTLKSMEGSDGHAMKvamgMQKQItakrgqIDALQSKIQFLEEAMTNANKE 763
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
139-254 |
2.55e-10 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 64.66 E-value: 2.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 139 KLLQYNCPTEHADLQGRTALH---DAAMADCPSSIQLLCDHGASVNAKDVDGRTPL-VLATQMSRPTICQLLIDRGADVN 214
Cdd:PHA03095 32 RLLAAGADVNFRGEYGKTPLHlylHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLhLYLYNATTLDVIKLLIKAGADVN 111
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1034591230 215 SRDKQNRTALMLGCEYGCRDA--VEVLIKNGADISLLDALGH 254
Cdd:PHA03095 112 AKDKVGRTPLHVYLSGFNINPkvIRLLLRKGADVNALDLYGM 153
|
|
| PHA02875 |
PHA02875 |
ankyrin repeat protein; Provisional |
73-249 |
2.58e-10 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165206 [Multi-domain] Cd Length: 413 Bit Score: 64.24 E-value: 2.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 73 ILAKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILIHGV---DITTSDtaGRNALHLAAKYGHALCLQKLLQYNCPTEH 149
Cdd:PHA02875 53 LLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKfadDVFYKD--GMTPLHLATILKKLDIMKLLIARGADPDI 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 150 ADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALM-LGC 228
Cdd:PHA02875 131 PNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALcYAI 210
|
170 180
....*....|....*....|.
gi 1034591230 229 EYGCRDAVEVLIKNGADISLL 249
Cdd:PHA02875 211 ENNKIDIVRLFIKRGADCNIM 231
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
978-1388 |
3.49e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 64.66 E-value: 3.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 978 EEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKY-------SVSEEEVKKNKQEN 1050
Cdd:TIGR04523 40 KKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKInklnsdlSKINSEIKNDKEQK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1051 DKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQ 1130
Cdd:TIGR04523 120 NKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1131 HVPLEQVEALK---KSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNssvplaEHLQIKEAFEKevgiIKASL 1207
Cdd:TIGR04523 200 ELLLSNLKKKIqknKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT------QLNQLKDEQNK----IKKQL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1208 REKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKY--------KATKSDLETQISSLNEKLANLNRKYEEVCE 1279
Cdd:TIGR04523 270 SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKElkselknqEKKLEEIQNQISQNNKIISQLNEQISQLKK 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1280 EVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSL---TTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALN 1356
Cdd:TIGR04523 350 ELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKnleSQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIE 429
|
410 420 430
....*....|....*....|....*....|..
gi 1034591230 1357 GLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQ 1388
Cdd:TIGR04523 430 RLKETIIKNNSEIKDLTNQDSVKELIIKNLDN 461
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
799-1390 |
3.88e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 64.75 E-value: 3.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 799 KLEMEKLLLENDSLSKDVSRleTVFVPPEKHEKEIIALKSNIVELKKQLSELK-------------KKCGED-----QEK 860
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQR--RLNESNELHEKQKFYLRQSVIDLQTKLQEMQmerdamadirrreSQSQEDlrnqlQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 861 IHALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNRELLDV-----KKKFEDINQEFVKIKDKNEILKRNLENTQ 935
Cdd:pfam15921 151 VHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFeeasgKKIYEHDSMSTMHFRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 936 NQI---KAEYISLAEHEAKMSSLSQS-----MRKVQDSNAEILANYrkgQEEIVTLHAEIKAQKKELDTIQ---ECIKVK 1004
Cdd:pfam15921 231 TEIsylKGRIFPVEDQLEALKSESQNkiellLQQHQDRIEQLISEH---EVEITGLTEKASSARSQANSIQsqlEIIQEQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1005 YAPIVSFEECE-RKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQendkLKKEIFTLQKDLRDKtvLIEKSHEMERALSR 1083
Cdd:pfam15921 308 ARNQNSMYMRQlSDLESTVSQLRSELREAKRMYEDKIEELEKQLV----LANSELTEARTERDQ--FSQESGNLDDQLQK 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1084 KTDELNKQLKDLSQKytevKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYE 1163
Cdd:pfam15921 382 LLADLHKREKELSLE----KEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKN 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1164 KEQQTVTKLHQLLENQKNSSVPLAEHLQIK----EAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLE 1239
Cdd:pfam15921 458 ESLEKVSSLTAQLESTKEMLRKVVEELTAKkmtlESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLK 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1240 TrEVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQ---EIKDQKERCDKS 1316
Cdd:pfam15921 538 N-EGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDrrlELQEFKILKDKK 616
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1317 LTTITELQRRIQ----ESAKQIEAKDNKI----------TELLNDVERLKQALNGLSQ----LTYTSGNPTKRQSQLIDT 1378
Cdd:pfam15921 617 DAKIRELEARVSdlelEKVKLVNAGSERLravkdikqerDQLLNEVKTSRNELNSLSEdyevLKRNFRNKSEEMETTTNK 696
|
650
....*....|..
gi 1034591230 1379 LQHQVKSLEQQL 1390
Cdd:pfam15921 697 LKMQLKSAQSEL 708
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
92-272 |
8.04e-10 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 62.76 E-value: 8.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 92 FHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQK-----LLQYNCPTEHADLQGRTALHDAAMADC 166
Cdd:PHA03100 39 LYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKeivklLLEYGANVNAPDNNGITPLLYAISKKS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 167 --PSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPT--ICQLLIDRGADVN----------------SRDKQNRTALML 226
Cdd:PHA03100 119 nsYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDlkILKLLIDKGVDINaknrvnyllsygvpinIKDVYGFTPLHY 198
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1034591230 227 GCEYGCRDAVEVLIKNGADISLLDALGHDSSYYARIGDNLDILTLL 272
Cdd:PHA03100 199 AVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLL 244
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
947-1298 |
8.07e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.92 E-value: 8.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 947 EHEAKMSSLSQSMRKVQDSNAEILANYRK--GQEEIVTLHAEIKAQKKELDtiqecIKVKYAPIVSFEECERKFKATEKE 1024
Cdd:TIGR02168 176 ETERKLERTRENLDRLEDILNELERQLKSleRQAEKAERYKELKAELRELE-----LALLVLRLEELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1025 LKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKN 1104
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELES 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1105 VKEKLVEEnakqtseilavqnllqkqhvpLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSsv 1184
Cdd:TIGR02168 331 KLDELAEE---------------------LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSK-- 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1185 pLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNtkQALKKLETRevvdLSKYKATKSDLETQISSLN 1264
Cdd:TIGR02168 388 -VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELKELQAE----LEELEEELEELQEELERLE 460
|
330 340 350
....*....|....*....|....*....|....
gi 1034591230 1265 EKLANLNRKYEEVCEEVLHAKKKEISAKDEKELL 1298
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
932-1408 |
8.09e-10 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 63.59 E-value: 8.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 932 ENTQNQIKAEYISLAEHEAKMSSLSQSMRkVQDSNAEILANYRKGQEEIVTLHAEiKAQKKELDTIQECIKVKYAPIVSF 1011
Cdd:pfam05483 175 EYEREETRQVYMDLNNNIEKMILAFEELR-VQAENARLEMHFKLKEDHEKIQHLE-EEYKKEINDKEKQVSLLLIQITEK 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1012 EECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEI----FTLQKDLRDKTVLIEKSHEMERALSRKTDE 1087
Cdd:pfam05483 253 ENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELedikMSLQRSMSTQKALEEDLQIATKTICQLTEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1088 LNKQLKDLSQKYTEVKNVKEKLveenakqTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYE---- 1163
Cdd:pfam05483 333 KEAQMEELNKAKAAHSFVVTEF-------EATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNnkev 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1164 --KEQQTVTKLHQLLENQKNSSVPLAEHLQIKE--------AFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKq 1233
Cdd:pfam05483 406 elEELKKILAEDEKLLDEKKQFEKIAEELKGKEqelifllqAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEK- 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1234 aLKKLETREVVDL-----SKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIKD 1308
Cdd:pfam05483 485 -LKNIELTAHCDKlllenKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDE 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1309 QKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQ 1388
Cdd:pfam05483 564 VKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLEL 643
|
490 500
....*....|....*....|
gi 1034591230 1389 QLADADRQHQEVIAIYRTHL 1408
Cdd:pfam05483 644 ELASAKQKFEEIIDNYQKEI 663
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
482-1159 |
9.36e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 63.50 E-value: 9.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 482 KLQNELAHKVAECKAL---ALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNhrl 558
Cdd:TIGR04523 44 TIKNELKNKEKELKNLdknLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKN--- 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 559 teELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEgqaKE 638
Cdd:TIGR04523 121 --KLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIK---NK 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 639 LSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVkpEEHEQVKSRLEQKS 718
Cdd:TIGR04523 196 LLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLK--DEQNKIKKQLSEKQ 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 719 GEL---GKKITELTLKNQTLQKEIEKvyLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKY 795
Cdd:TIGR04523 274 KELeqnNKKIKELEKQLNQLKSEISD--LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKEL 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 796 TEKKLEMEKLlleNDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMM 875
Cdd:TIGR04523 352 TNSESENSEK---QRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEI 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 876 SNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSL 955
Cdd:TIGR04523 429 ERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKEL 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 956 SQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIqecikvkyapivsfeecerkfkatekelkdqlsEQTQK 1035
Cdd:TIGR04523 509 EEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD---------------------------------DFELK 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1036 YSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKshemeraLSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAK 1115
Cdd:TIGR04523 556 KENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQ-------KEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEK 628
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 1034591230 1116 QTSEIlavQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQ 1159
Cdd:TIGR04523 629 LSSII---KNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIK 669
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
348-932 |
9.75e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.62 E-value: 9.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 348 QLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEALKNRFKYFESDHLGSGShfSNRKEDMLLKQGQMYMADSQ 427
Cdd:PTZ00121 1294 EAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAE--AEAAADEAEAAEEKAEAAEK 1371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 428 CTS----PGIPAHMQSRSMLRPLELSLPSQTSYSENEILKKELEAMRTFCESAKQ-------DRLKLQNELAHKVAECKA 496
Cdd:PTZ00121 1372 KKEeakkKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKaeekkkaDEAKKKAEEAKKADEAKK 1451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 497 LALECERVKE--DSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTE-ELKDQLKDLKVKY 573
Cdd:PTZ00121 1452 KAEEAKKAEEakKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKaEEAKKADEAKKAE 1531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 574 EGASAEVGKLRNQIKQNEMI--VEEFKR-DEGKLIEENKRLQKELSMC----EMEREKKGRKVTEMEGQAKELSAKLALS 646
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELkkAEELKKaEEKKKAEEAKKAEEDKNMAlrkaEEAKKAEEARIEEVMKLYEEEKKMKAEE 1611
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 647 IPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKIT 726
Cdd:PTZ00121 1612 AKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAA 1691
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 727 ELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIE-----MKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLE 801
Cdd:PTZ00121 1692 EALKKEAEEAKKAEELKKKEAEEKKKAEELKKAeeenkIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAE 1771
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 802 ----MEKLLLENDSLSKDVSRLETVfvppekhEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSN 877
Cdd:PTZ00121 1772 eirkEKEAVIEEELDEEDEKRRMEV-------DKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLE 1844
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1034591230 878 QYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLE 932
Cdd:PTZ00121 1845 EADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIE 1899
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1061-1434 |
9.80e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 9.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1061 QKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEAL 1140
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1141 KKSLNGTIENLKEELKSMQRcYEKEQQTVTKLHQLLENQknssvpLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEE 1220
Cdd:COG1196 301 EQDIARLEERRRELEERLEE-LEEELAELEEELEELEEE------LEELEEELEEAEEELEEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1221 VSKLQSEVQNTKQALKKLETREVVDLSKYKAtksdLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAkdekellhf 1300
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEE----LEEAEEALLERLERLEEELEELEEALAELEEEEEEE--------- 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1301 siEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTytsgnpTKRQSQLIDTLQ 1380
Cdd:COG1196 441 --EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE------ADYEGFLEGVKA 512
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 1381 HQVKSLEQQLADADRQHQEVIAIYRTHLLSAAQGHMDEDVQEALLQIIQMRQGL 1434
Cdd:COG1196 513 ALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL 566
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
100-260 |
1.06e-09 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 62.29 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 100 NLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGAS 179
Cdd:PHA02874 103 EKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAY 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 180 VNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGcRDAVEVLIKNgADISLLDALGHDSSYY 259
Cdd:PHA02874 183 ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN-RSAIELLINN-ASINDQDIDGSTPLHH 260
|
.
gi 1034591230 260 A 260
Cdd:PHA02874 261 A 261
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
908-1353 |
2.42e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.47 E-value: 2.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 908 KKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDsNAEILANYRKGQEEIVTLHAEI 987
Cdd:PTZ00121 1194 RKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERN-NEEIRKFEEARMAHFARRQAAI 1272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 988 KAQ-KKELDTIQECIKVKYAPIVSFEECERKF-----KATEKELKDQLSEQTQKYSVSEEEVKKNKQENdklKKEIFTLQ 1061
Cdd:PTZ00121 1273 KAEeARKADELKKAEEKKKADEAKKAEEKKKAdeakkKAEEAKKADEAKKKAEEAKKKADAAKKKAEEA---KKAAEAAK 1349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1062 KDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKE--KLVEENAKQTSEILAVQNLLQKQHVPLEQVEA 1139
Cdd:PTZ00121 1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEakKKAEEDKKKADELKKAAAAKKKADEAKKKAEE 1429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1140 LKKSlngtiENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQiKEAFEKEVGiikASLREKEEESQNKME 1219
Cdd:PTZ00121 1430 KKKA-----DEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAK-KKAEEAKKA---DEAKKKAEEAKKKAD 1500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1220 EVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLnRKYEEV--CEEVLHAKKKEiSAKDEKEL 1297
Cdd:PTZ00121 1501 EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADEL-KKAEELkkAEEKKKAEEAK-KAEEDKNM 1578
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 1298 LHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQ 1353
Cdd:PTZ00121 1579 ALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK 1634
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
170-267 |
5.06e-09 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 60.68 E-value: 5.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 170 IQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLL 249
Cdd:PTZ00322 98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFEL 177
|
90
....*....|....*...
gi 1034591230 250 DALGHDSSYYARIGDNLD 267
Cdd:PTZ00322 178 GANAKPDSFTGKPPSLED 195
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
464-1410 |
9.02e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 60.45 E-value: 9.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 464 KELEAMRTFCESAKQD------RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEgkvkQMQ 537
Cdd:TIGR00606 186 KALETLRQVRQTQGQKvqehqmELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIE----HNL 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 538 THFLALKEHLTSEAASGNHRltEELKDQLKDLKVK-YEGASAEVGKLrnqikqnemivEEFKRDEGKLIEENK-RLQKEL 615
Cdd:TIGR00606 262 SKIMKLDNEIKALKSRKKQM--EKDNSELELKMEKvFQGTDEQLNDL-----------YHNHQRTVREKERELvDCQREL 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 616 SMCEMEREKKGRKVTEMEGQAKELSAKlalsipAEKFENMKSSLSNEVNEKAKKL----VEMEREHEKSLSEIRQLKREL 691
Cdd:TIGR00606 329 EKLNKERRLLNQEKTELLVEQGRLQLQ------ADRHQEHIRARDSLIQSLATRLeldgFERGPFSERQIKNFHTLVIER 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 692 ENVKAKLAQHVKPEEHEQVKSRLEQKSG-ELGKKITELTLKNQTLQKEIEKVYLDNKllKEQAHNLTIEMKNhyvPLKVS 770
Cdd:TIGR00606 403 QEDEAKTAAQLCADLQSKERLKQEQADEiRDEKKGLGRTIELKKEILEKKQEELKFV--IKELQQLEGSSDR---ILELD 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 771 EDMKKSHdaiiddlnRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRletvfvppeKHEKEIIALKSNIVELKKQLSEL 850
Cdd:TIGR00606 478 QELRKAE--------RELSKAEKNSLTETLKKEVKSLQNEKADLDRKL---------RKLDQEMEQLNHHTTTRTQMEML 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 851 KKKCGEDQEKIHALTSENtnlkkmmSNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKikdkneilkrn 930
Cdd:TIGR00606 541 TKDKMDKDEQIRKIKSRH-------SDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELAS----------- 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 931 LENTQNQIKAEYISLaehEAKMSSLSQSMRKVQDSNAEilanyrkgQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVS 1010
Cdd:TIGR00606 603 LEQNKNHINNELESK---EEQLSSYEDKLFDVCGSQDE--------ESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQ 671
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1011 FEE--------CERKFKaTEKELKDQLSEQTQKYSV-------SEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSH 1075
Cdd:TIGR00606 672 LTDenqsccpvCQRVFQ-TEAELQEFISDLQSKLRLapdklksTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELR 750
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1076 EMERALSRKTDELNKQLKDlSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGT-------- 1147
Cdd:TIGR00606 751 NKLQKVNRDIQRLKNDIEE-QETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDrtvqqvnq 829
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1148 --------IENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEvgiikasLREKEEESQNKME 1219
Cdd:TIGR00606 830 ekqekqheLDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQ-------LVELSTEVQSLIR 902
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1220 EVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLAN-------LNRKYEEVCEEVLHAKKKEISA- 1291
Cdd:TIGR00606 903 EIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNihgymkdIENKIQDGKDDYLKQKETELNTv 982
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1292 ------------KDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELlnDVERLKQALNGLS 1359
Cdd:TIGR00606 983 naqleecekhqeKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQM--QVLQMKQEHQKLE 1060
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 1360 QLTYTSGNPTK----RQSQLIDTLQHQVKSL-EQQLADADRQHQEVIAIYRTHLLS 1410
Cdd:TIGR00606 1061 ENIDLIKRNHVlalgRQKGYEKEIKHFKKELrEPQFRDAEEKYREMMIVMRTTELV 1116
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
668-1361 |
1.47e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.60 E-value: 1.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 668 KKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKsgELGKKITELTLKNQTLQKEIEKVYLDNK 747
Cdd:pfam02463 169 RKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEK--LELEEEYLLYLDYLKLNEERIDLLQELL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 748 LLKEQAHNLTI-EMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVfvpP 826
Cdd:pfam02463 247 RDEQEEIESSKqEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKE---K 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 827 EKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEE----VKMTLNDTLAKTNRE 902
Cdd:pfam02463 324 KKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESErlssAAKLKEEELELKSEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 903 LLDVKKKFEDINQEFVKIKDKNEILKRNLENTQ--NQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEI 980
Cdd:pfam02463 404 EKEAQLLLELARQLEDLLKEEKKEELEILEEEEesIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQ 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 981 VTLHAEIKAQKKELDTIQEC----------IKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQEN 1050
Cdd:pfam02463 484 EQLELLLSRQKLEERSQKESkarsglkvllALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEER 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1051 DKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKT--DELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEI-------- 1120
Cdd:pfam02463 564 QKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEidPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTklkesaka 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1121 --------------------LAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQK 1180
Cdd:pfam02463 644 kesglrkgvsleeglaekseVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELL 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1181 NSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVV---DLSKYKATKSDLE 1257
Cdd:pfam02463 724 ADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKveeEKEEKLKAQEEEL 803
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1258 TQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRR--IQESAKQIE 1335
Cdd:pfam02463 804 RALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELllKEEELEEQK 883
|
730 740
....*....|....*....|....*.
gi 1034591230 1336 AKDNKITELLNDVERLKQALNGLSQL 1361
Cdd:pfam02463 884 LKDELESKEEKEKEEKKELEEESQKL 909
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
314-1058 |
2.00e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.31 E-value: 2.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 314 QNIQDLEIENEDLKE----RLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEAL 389
Cdd:TIGR02169 198 QQLERLRREREKAERyqalLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 390 KNRFKyfesdHLGSGSHFSnRKEDMLLKQGQMYMADSQctspgipahmQSRSMLRPLELSLPSQTSYSENEILKKELEAM 469
Cdd:TIGR02169 278 NKKIK-----DLGEEEQLR-VKEKIGELEAEIASLERS----------IAEKERELEDAEERLAKLEAEIDKLLAEIEEL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 470 RTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDE---QIKQLEDALKDVQKRMYESEGKVKQMQThflaLKEH 546
Cdd:TIGR02169 342 EREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAEtrdELKDYREKLEKLKREINELKRELDRLQE----ELQR 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 547 LTSEAASGNHRLtEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEME----- 621
Cdd:TIGR02169 418 LSEELADLNAAI-AGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRElaeae 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 622 --------REKKGRKVTEMEGQ------------------------------------------------AKELSAKLAL 645
Cdd:TIGR02169 497 aqaraseeRVRGGRAVEEVLKAsiqgvhgtvaqlgsvgeryataievaagnrlnnvvveddavakeaielLKRRKAGRAT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 646 SIPAEKFENMKSSLS----NEVNEKAKKLVEMEREHEKSLSEIRQ---LKRELENVKAKLAQ------------------ 700
Cdd:TIGR02169 577 FLPLNKMRDERRDLSilseDGVIGFAVDLVEFDPKYEPAFKYVFGdtlVVEDIEAARRLMGKyrmvtlegelfeksgamt 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 701 --HVKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVyldNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHD 778
Cdd:TIGR02169 657 ggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI---ENRLDELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 779 A---IIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVPPEKH---------EKEIIALKSNIVELKKQ 846
Cdd:TIGR02169 734 KlkeRLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARlshsripeiQAELSKLEEEVSRIEAR 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 847 LSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEI 926
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDE 893
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 927 LK---RNLENTQNQIKAEYISLAEHeakMSSLSQSMRKVQDSNAEILANYRKGQEE------IVTLHAEIKAQKKELDTI 997
Cdd:TIGR02169 894 LEaqlRELERKIEELEAQIEKKRKR---LSELKAKLEALEEELSEIEDPKGEDEEIpeeelsLEDVQAELQRVEEEIRAL 970
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034591230 998 QEcikVKYAPIVSFEECERKFkatekelkDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIF 1058
Cdd:TIGR02169 971 EP---VNMLAIQEYEEVLKRL--------DELKEKRAKLEEERKAILERIEEYEKKKREVF 1020
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
653-1274 |
2.42e-08 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 58.76 E-value: 2.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 653 ENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLaQHVKPEEHE-----QVKSRLEQKSGELGKKITE 727
Cdd:PRK01156 189 EEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDY-NNLKSALNElssleDMKNRYESEIKTAESDLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 728 LTLKNQTLqKEIEKVYldNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNR-----KLLDVTQKYTEKKLEM 802
Cdd:PRK01156 268 ELEKNNYY-KELEERH--MKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKyhaiiKKLSVLQKDYNDYIKK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 803 EKlllENDSLSKDVSRLETvfvppekHEKEIIALKSNIVELKKQLSELKKKcgedQEKIHALTSENtnLKKMMSNQYVPV 882
Cdd:PRK01156 345 KS---RYDDLNNQILELEG-------YEMDYNSYLKSIESLKKKIEEYSKN----IERMSAFISEI--LKIQEIDPDAIK 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 883 KTHEEVkmtlndtlaktNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLsqsMRKV 962
Cdd:PRK01156 409 KELNEI-----------NVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSNHI---INHY 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 963 QDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQEcikvkyAPIVSFEECERKFKATEKELKD------QLSEQTQKY 1036
Cdd:PRK01156 475 NEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLES------EEINKSINEYNKIESARADLEDikikinELKDKHDKY 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1037 SVSEEEVKKNKQENDKLKKEIFTLQKDLRDkTVLIEkshemerALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQ 1116
Cdd:PRK01156 549 EEIKNRYKSLKLEDLDSKRTSWLNALAVIS-LIDIE-------TNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKS 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1117 TSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSsvplaehlqikeaf 1196
Cdd:PRK01156 621 IREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKS-------------- 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1197 EKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETRE--VVDLSKYKAT--KSDLETQI-SSLNEKLANLN 1271
Cdd:PRK01156 687 RKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKkaIGDLKRLREAfdKSGVPAMIrKSASQAMTSLT 766
|
...
gi 1034591230 1272 RKY 1274
Cdd:PRK01156 767 RKY 769
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
307-1389 |
2.77e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 58.91 E-value: 2.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 307 KSHQREHQNIQDLEIENEDLK------ERLRKIQQEQRILLDKVNGLQLQLNEEVMVAddlESEREKLKSLLAAKEKQHE 380
Cdd:TIGR01612 904 KSIEEEYQNINTLKKVDEYIKicentkESIEKFHNKQNILKEILNKNIDTIKESNLIE---KSYKDKFDNTLIDKINELD 980
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 381 E-----SLRTIEALKNRF-KYFESDHLGSGSHfsnrKEDMLLKQ------------GQMYMADSQCTSPGIPAHMQSRSM 442
Cdd:TIGR01612 981 KafkdaSLNDYEAKNNELiKYFNDLKANLGKN----KENMLYHQfdekekatndieQKIEDANKNIPNIEIAIHTSIYNI 1056
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 443 LRPLELSLPSQTSYSENEILKKELEAMRTFCESakQDRLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDV 522
Cdd:TIGR01612 1057 IDEIEKEIGKNIELLNKEILEEAEINITNFNEI--KEKLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKAL 1134
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 523 QKRMYESEGKVKQMQTHFLALkEHLTSEAASGNHrlTEELKDQLKDLKVKYEGAS---AEVGKLRNQIKQNEMIVEEFKR 599
Cdd:TIGR01612 1135 EEIKKKSENYIDEIKAQINDL-EDVADKAISNDD--PEEIEKKIENIVTKIDKKKniyDEIKKLLNEIAEIEKDKTSLEE 1211
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 600 DEGKLIEENKRLQKE-LSMCEMEREKKGRKVTEMEGQAKEL------SAKLALSIPAEKFENMKSSLSNEVNEKAKKLVE 672
Cdd:TIGR01612 1212 VKGINLSYGKNLGKLfLEKIDEEKKKSEHMIKAMEAYIEDLdeikekSPEIENEMGIEMDIKAEMETFNISHDDDKDHHI 1291
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 673 MEREHEKSLSEIRQ--LKRELENVKAKLAQHVKPEEHEQVkSRLEQKSGELGKKITELT-----LKNQTLQKEIEKVYLD 745
Cdd:TIGR01612 1292 ISKKHDENISDIREksLKIIEDFSEESDINDIKKELQKNL-LDAQKHNSDINLYLNEIAniyniLKLNKIKKIIDEVKEY 1370
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 746 NKLLKEQAHNLTIEMKNHYVPLKVSED---MKKSHDAIIDDLNRKLLD-VTQKYTEKKLEMEKLLLENDSL-------SK 814
Cdd:TIGR01612 1371 TKEIEENNKNIKDELDKSEKLIKKIKDdinLEECKSKIESTLDDKDIDeCIKKIKELKNHILSEESNIDTYfknadenNE 1450
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 815 DVSRLETVFVPPEKHEKEIIALKS---------NIVELKKQLSElKKKCGEDQEKIHALTSENTNLKK-------MMSNQ 878
Cdd:TIGR01612 1451 NVLLLFKNIEMADNKSQHILKIKKdnatndhdfNINELKEHIDK-SKGCKDEADKNAKAIEKNKELFEqykkdvtELLNK 1529
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 879 YVPVKTHEEVKMTLNDTLAKTNrELLDVKKKF----EDINQEFVKIKDKNEILKRNLENTQNQIKAEY---ISLAEHEAK 951
Cdd:TIGR01612 1530 YSALAIKNKFAKTKKDSEIIIK-EIKDAHKKFileaEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIdiqLSLENFENK 1608
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 952 MSSLSQSMRKVQDSNAEILANYRK-GQEEIVTLHAEIKAQKKELDTIQECIKvkyapivSFEECERKFKATEKELkDQLS 1030
Cdd:TIGR01612 1609 FLKISDIKKKINDCLKETESIEKKiSSFSIDSQDTELKENGDNLNSLQEFLE-------SLKDQKKNIEDKKKEL-DELD 1680
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1031 EQTQKYSVSEEEVKKNKQEN--DKLKKEIFTLQKDLRDKTVLIEKSheMERALS-------------RKTDELNKQLKDL 1095
Cdd:TIGR01612 1681 SEIEKIEIDVDQHKKNYEIGiiEKIKEIAIANKEEIESIKELIEPT--IENLISsfntndlegidpnEKLEEYNTEIGDI 1758
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1096 SQKYTEVKNV---------KEKLVEENAKQT-----SEILAVQNLLQKQHVPLEQVEAlkKSLNGTIENLKEELKSMQRC 1161
Cdd:TIGR01612 1759 YEEFIELYNIiagcletvsKEPITYDEIKNTrinaqNEFLKIIEIEKKSKSYLDDIEA--KEFDRIINHFKKKLDHVNDK 1836
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1162 YEKEQQTVTK----LHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQS----EVQNTkQ 1233
Cdd:TIGR01612 1837 FTKEYSKINEgfddISKSIENVKNSTDENLLFDILNKTKDAYAGIIGKKYYSYKDEAEKIFINISKLANsiniQIQNN-S 1915
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1234 ALKKLETREVVDLSKYKATKSDLETQISSlNEKLANLNRKYEEVCEEVLHA-KKKEISAKDEKELLHFSIEQEIKDQKER 1312
Cdd:TIGR01612 1916 GIDLFDNINIAILSSLDSEKEDTLKFIPS-PEKEPEIYTKIRDSYDTLLDIfKKSQDLHKKEQDTLNIIFENQQLYEKIQ 1994
|
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 1313 CDKSLttitelqrriQESAKQIEAKDNKItelLNDVERLKQALNGLSQLTYTSGN-PTKRQSQLIDTLQHQVKSLEQQ 1389
Cdd:TIGR01612 1995 ASNEL----------KDTLSDLKYKKEKI---LNDVKLLLHKFDELNKLSCDSQNyDTILELSKQDKIKEKIDNYEKE 2059
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
69-242 |
3.52e-08 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 57.58 E-value: 3.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 69 KVTSILAKKGVNPGKLDVE-GRSVFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPT 147
Cdd:PHA02878 148 EITKLLLSYGADINMKDRHkGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 148 EHADLQGRTALHdAAMADCPSS--IQLLCDHGASVNAKD-VDGRTPLVLATQMSRPTicQLLIDRGADVNSRDKQNRTAL 224
Cdd:PHA02878 228 DARDKCGNTPLH-ISVGYCKDYdiLKLLLEHGVDVNAKSyILGLTALHSSIKSERKL--KLLLEYGADINSLNSYKLTPL 304
|
170
....*....|....*....
gi 1034591230 225 -MLGCEYGCRDAVEVLIKN 242
Cdd:PHA02878 305 sSAVKQYLCINIGRILISN 323
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
458-851 |
8.15e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 57.05 E-value: 8.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 458 ENEILKKeLEAMRTFCESAKQDRLKLQNELAHKvaeckalalecERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQ 537
Cdd:pfam15921 456 KNESLEK-VSSLTAQLESTKEMLRKVVEELTAK-----------KMTLESSERTVSDLTASLQEKERAIEATNAEITKLR 523
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 538 THF-LALKE--HLTSEAASGNHRLTEelkdqLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKE 614
Cdd:pfam15921 524 SRVdLKLQElqHLKNEGDHLRNVQTE-----CEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKE 598
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 615 LSMCEMEREKKGRKVTEMEGQAKELSAKLAlsipaeKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENV 694
Cdd:pfam15921 599 INDRRLELQEFKILKDKKDAKIRELEARVS------DLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSL 672
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 695 KaklaqhvkpEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIekvyldnkllkEQAHNLTIEMK-NHYVPLKVSEDM 773
Cdd:pfam15921 673 S---------EDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSEL-----------EQTRNTLKSMEgSDGHAMKVAMGM 732
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 774 KKSHDAI---IDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSrleTVFVPPEKHEKEIIALKSNIVELKKQLSEL 850
Cdd:pfam15921 733 QKQITAKrgqIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELS---TVATEKNKMAGELEVLRSQERRLKEKVANM 809
|
.
gi 1034591230 851 K 851
Cdd:pfam15921 810 E 810
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
154-207 |
1.00e-07 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 49.97 E-value: 1.00e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 154 GRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLI 207
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
273-938 |
1.01e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.07 E-value: 1.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 273 KTASENTNKGRELWKKGPSLQQRN-LTHMQDEVNVKSHQREHQNIQDLEIENEDLK---ERLRKIQQEQRilldKVNGLQ 348
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAeAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKkkaDAAKKKAEEKK----KADEAK 1397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 349 LQLNEEVMVADDLESEREKLKSLLAAKEKQhEESLRTIEALKNRFKYFESDHLGSGSHFSNRKEDMLLKQGQMYMADSqc 428
Cdd:PTZ00121 1398 KKAEEDKKKADELKKAAAAKKKADEAKKKA-EEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE-- 1474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 429 tspgipAHMQSRSMLRPLELSLPSQTSYSENEILKKELEAMRTFCESAKQDRLKLQNELahKVAECKALALECERVKEDS 508
Cdd:PTZ00121 1475 ------AKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEA--KKAEEAKKADEAKKAEEKK 1546
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 509 D-EQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASgnhRLTEELKDQLKDLKVKYEGA-SAEVGKLR-N 585
Cdd:PTZ00121 1547 KaDELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEA---RIEEVMKLYEEEKKMKAEEAkKAEEAKIKaE 1623
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 586 QIKQNEMI---VEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAklalsipAEKFENMKSSLSNE 662
Cdd:PTZ00121 1624 ELKKAEEEkkkVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK-------AEEDEKKAAEALKK 1696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 663 VNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKIteltlknQTLQKEIEKV 742
Cdd:PTZ00121 1697 EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKI-------AHLKKEEEKK 1769
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 743 YLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMK--KSHDAIIDDLNRKlldvTQKYTEKKLEMEKLLLENDSLSKDVSRLE 820
Cdd:PTZ00121 1770 AEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKdiFDNFANIIEGGKE----GNLVINDSKEMEDSAIKEVADSKNMQLEE 1845
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 821 TVFVPPEKHEKEIIALKSNIvelKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPvktheevkmtlNDTLAKTN 900
Cdd:PTZ00121 1846 ADAFEKHKFNKNNENGEDGN---KEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIP-----------NNNMAGKN 1911
|
650 660 670
....*....|....*....|....*....|....*...
gi 1034591230 901 RELLDVKkkfedinqefvkiKDKNEILKRNLENTQNQI 938
Cdd:PTZ00121 1912 NDIIDDK-------------LDKDEYIKRDAEETREEI 1936
|
|
| PHA02875 |
PHA02875 |
ankyrin repeat protein; Provisional |
99-280 |
1.10e-07 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165206 [Multi-domain] Cd Length: 413 Bit Score: 56.15 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 99 GNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGA 178
Cdd:PHA02875 13 GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGK 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 179 SVNakDV---DGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALGHD 255
Cdd:PHA02875 93 FAD--DVfykDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCT 170
|
170 180
....*....|....*....|....*
gi 1034591230 256 SSYYARIGDNLDILTLLKTASENTN 280
Cdd:PHA02875 171 PLIIAMAKGDIAICKMLLDSGANID 195
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
892-1391 |
1.21e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 892 LNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILA 971
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 972 NYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQEND 1051
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1052 KLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKqh 1131
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL-- 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1132 vpLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHqLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASL---- 1207
Cdd:COG1196 475 --LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL-LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAlqni 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1208 ---------REKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVD-------------------LSKYKATKSDLETQ 1259
Cdd:COG1196 552 vveddevaaAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGaavdlvasdlreadaryyvLGDTLLGRTLVAAR 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1260 ISSLNEKLANLNRKYEEV---CEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEA 1336
Cdd:COG1196 632 LEAALRRAVTLAGRLREVtleGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE 711
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 1337 KDNKITELLNDVERLKQALNGLSQ-----------LTYTSGNPTKRQSQLIDTLQHQVKSLEQQLA 1391
Cdd:COG1196 712 AEEERLEEELEEEALEEQLEAEREelleelleeeeLLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
652-920 |
1.51e-07 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 56.09 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 652 FENMKSSLSNEVNEKAKKLVEMEREHeksLSEIRQLkRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKITELTLK 731
Cdd:PRK05771 33 IEDLKEELSNERLRKLRSLLTKLSEA---LDKLRSY-LPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 732 NQTLQKEIEKvYLDNKLLKEQAHNLTIEMKNHY-------VPLKVSEDMKKSHDAIIDDLNRKLLDVTQKY------TEK 798
Cdd:PRK05771 109 ISELENEIKE-LEQEIERLEPWGNFDLDLSLLLgfkyvsvFVGTVPEDKLEELKLESDVENVEYISTDKGYvyvvvvVLK 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 799 KL--EMEKLLLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMS 876
Cdd:PRK05771 188 ELsdEVEEELKKLGFERLELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEALS 267
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 877 NQ-----------YVPVKTHEEVKMTLNDTlakTNR----ELLDVKKKFEDI-----NQEFVKI 920
Cdd:PRK05771 268 KFlktdktfaiegWVPEDRVKKLKELIDKA---TGGsayvEFVEPDEEEEEVptklkNPKFIKP 328
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
925-1353 |
1.82e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.82 E-value: 1.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 925 EILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVK 1004
Cdd:PRK02224 254 ETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1005 YAPIVSF-EECERKFKATE------KELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEM 1077
Cdd:PRK02224 334 RVAAQAHnEEAESLREDADdleeraEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDF 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1078 ERALSRKTDELNKQLKDLSQKYTEVKNVKEK---LVE-----------ENAKQTSEILAVQNLLQKQHVPLEQVEALKKS 1143
Cdd:PRK02224 414 LEELREERDELREREAELEATLRTARERVEEaeaLLEagkcpecgqpvEGSPHVETIEEDRERVEELEAELEDLEEEVEE 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1144 LNGTIENLkEELKSMQRCYEKEQQTVTKLHQLLENQKNS----SVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKME 1219
Cdd:PRK02224 494 VEERLERA-EDLVEAEDRIERLEERREDLEELIAERRETieekRERAEELRERAAELEAEAEEKREAAAEAEEEAEEARE 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1220 EVSKLQSEVQNTKQALKKLETREVVDlskykATKSDLETQISSLNEKLANLNRKYEEVCEEVlhAKKKEISAKDEKELLH 1299
Cdd:PRK02224 573 EVAELNSKLAELKERIESLERIRTLL-----AAIADAEDEIERLREKREALAELNDERRERL--AEKRERKRELEAEFDE 645
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 1300 FSIEqEIKDQKERCDKSLTTITELQRRIQES----AKQIEAKDNKITELLNDVERLKQ 1353
Cdd:PRK02224 646 ARIE-EAREDKERAEEYLEQVEEKLDELREErddlQAEIGAVENELEELEELRERREA 702
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
827-1067 |
3.88e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 3.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 827 EKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNqyvpvktheevkmtLNDTLAKTNRELLDV 906
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA--------------LEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 907 KKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAE 986
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 987 IKAQKKELDTIQEcikvkyapivSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRD 1066
Cdd:COG4942 169 LEAERAELEALLA----------ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
.
gi 1034591230 1067 K 1067
Cdd:COG4942 239 A 239
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
88-141 |
6.85e-07 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 47.27 E-value: 6.85e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 88 GRSVFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLL 141
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
299-1239 |
1.02e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.51 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 299 HMQDEVNVKSHQREHQN--IQDLEIENEDLKERLRKIQQEQRILldkvnglqLQLNEEVMVADDLESEREKLKSLLaaKE 376
Cdd:TIGR00606 221 EIRDQITSKEAQLESSReiVKSYENELDPLKNRLKEIEHNLSKI--------MKLDNEIKALKSRKKQMEKDNSEL--EL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 377 KQHEESLRTIEALKNRFKYFESDHLGSGSHFS--------NRKEDMLLKQGQMYM----ADSQCTSPGIPAHMQSRSMLR 444
Cdd:TIGR00606 291 KMEKVFQGTDEQLNDLYHNHQRTVREKERELVdcqrelekLNKERRLLNQEKTELlveqGRLQLQADRHQEHIRARDSLI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 445 pLELSLPSQTSYSENE-ILKKELEAMRTFCESAKQDRLKLQNELAHKVAECKALAlecervkedsDEQIKQLEDALKDVQ 523
Cdd:TIGR00606 371 -QSLATRLELDGFERGpFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLK----------QEQADEIRDEKKGLG 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 524 KRMYESEGKVKQMQTHFLALKEHLTSEAASGNH--RLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMI-VEEFKRD 600
Cdd:TIGR00606 440 RTIELKKEILEKKQEELKFVIKELQQLEGSSDRilELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKAdLDRKLRK 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 601 EGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLALSIP----AEKFENMKSSLSNEVNEKAKKLVEMERE 676
Cdd:TIGR00606 520 LDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGyfpnKKQLEDWLHSKSKEINQTRDRLAKLNKE 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 677 HEKSLSEIRQLKRELENVKAKLaqhvkpeeheqvkSRLEQKSGEL-GKKITELTLKNqtLQKEIEKVYLDNKLLKEQAH- 754
Cdd:TIGR00606 600 LASLEQNKNHINNELESKEEQL-------------SSYEDKLFDVcGSQDEESDLER--LKEEIEKSSKQRAMLAGATAv 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 755 ------NLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFvppEK 828
Cdd:TIGR00606 665 ysqfitQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSII---DL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 829 HEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEEVK--------MTLNDTLAKTN 900
Cdd:TIGR00606 742 KEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKdverkiaqQAAKLQGSDLD 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 901 RELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQdsnaeilanyrKGQEEI 980
Cdd:TIGR00606 822 RTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQ-----------QFEEQL 890
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 981 VTLHAEikaqkkeldtIQECIKvkyapivSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTL 1060
Cdd:TIGR00606 891 VELSTE----------VQSLIR-------EIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNI 953
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1061 QKDLRDKTVLIEKSheMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLveENAKQTSEILAVQNLLQKQHVPLEQVEAL 1140
Cdd:TIGR00606 954 HGYMKDIENKIQDG--KDDYLKQKETELNTVNAQLEECEKHQEKINEDM--RLMRQDIDTQKIQERWLQDNLTLRKRENE 1029
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1141 KKSLNGTIENLKEELKSMQRCYEKeqQTVTKLHQLLENQKNSSVPLAEHLQikeAFEKEVGIIKASLREKeeESQNKMEE 1220
Cdd:TIGR00606 1030 LKEVEEELKQHLKEMGQMQVLQMK--QEHQKLEENIDLIKRNHVLALGRQK---GYEKEIKHFKKELREP--QFRDAEEK 1102
|
970
....*....|....*....
gi 1034591230 1221 VSKLQSEVQNTKQALKKLE 1239
Cdd:TIGR00606 1103 YREMMIVMRTTELVNKDLD 1121
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
908-1122 |
1.63e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 908 KKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEI 987
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 988 KAQKKE----LDTIQECIKVKY-APIVSFEECERKFKATE--KELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTL 1060
Cdd:COG4942 100 EAQKEElaelLRALYRLGRQPPlALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 1061 QKDLRDK----TVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILA 1122
Cdd:COG4942 180 LAELEEEraalEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
799-1356 |
1.67e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 52.98 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 799 KLEMEKLLLEN--DSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMS 876
Cdd:PRK01156 163 SLERNYDKLKDviDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALN 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 877 NQyvpvktheevkMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLS 956
Cdd:PRK01156 243 EL-----------SSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 957 QSMRKVQDSNAEILANYRKgQEEIVTLHAEIKAQKKELDTIQECI------KVKYAPIV-SFEECERKFKATEKELKDQL 1029
Cdd:PRK01156 312 QILSNIDAEINKYHAIIKK-LSVLQKDYNDYIKKKSRYDDLNNQIlelegyEMDYNSYLkSIESLKKKIEEYSKNIERMS 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1030 SEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLK------DLSQKYTEvk 1103
Cdd:PRK01156 391 AFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpvcgtTLGEEKSN-- 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1104 NVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGtiENLKEelksmqrcYEKEQQTVTKLHQLLENQKNSS 1183
Cdd:PRK01156 469 HIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLES--EEINK--------SINEYNKIESARADLEDIKIKI 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1184 VPLAE-HLQIKEAFEKEVGIIKASLREKEEESQNKMEEVS-----KLQSEVQNTKQALKKLETREVVDLSKYKATKSDLE 1257
Cdd:PRK01156 539 NELKDkHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISlidieTNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYID 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1258 TQISSLNEKLANLNRKYEEVCE-----EVLHAK----KKEISAKDEkellhfsIEQEIKDQKERCDKSLTTITELQRRIQ 1328
Cdd:PRK01156 619 KSIREIENEANNLNNKYNEIQEnkiliEKLRGKidnyKKQIAEIDS-------IIPDLKEITSRINDIEDNLKKSRKALD 691
|
570 580
....*....|....*....|....*...
gi 1034591230 1329 ESAKQIEAKDNKITELLNDVERLKQALN 1356
Cdd:PRK01156 692 DAKANRARLESTIEILRTRINELSDRIN 719
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
917-1389 |
2.14e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.66 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 917 FVKIKDKNEILKRNLENTQNQIKAeyisLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDT 996
Cdd:TIGR00618 367 IREISCQQHTLTQHIHTLQQQKTT----LTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAEL 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 997 ----IQECIKVKYAPIVSFEECERKFKATEKELKD--QLSEQTQKYSVSEEEVKKNKQENDK-LKKEIFTLQKDLRDKTV 1069
Cdd:TIGR00618 443 caaaITCTAQCEKLEKIHLQESAQSLKEREQQLQTkeQIHLQETRKKAVVLARLLELQEEPCpLCGSCIHPNPARQDIDN 522
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1070 LIEKSHEMERALSRKT-------------DELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQ 1136
Cdd:TIGR00618 523 PGPLTRRMQRGEQTYAqletseedvyhqlTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEK 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1137 VEALKKSLNGTIENLKEELK----------SMQRCYEKEQQTVTKLHQLLENQKNSSVplAEHLQIKEAFEKEVGiikAS 1206
Cdd:TIGR00618 603 LSEAEDMLACEQHALLRKLQpeqdlqdvrlHLQQCSQELALKLTALHALQLTLTQERV--REHALSIRVLPKELL---AS 677
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1207 LREKEEESQNKMEEVSKLQSEVQNTKQALKKLET------REVVDLSKYKAT-KSDLETQISSLNEKLANLNRKYEEVCE 1279
Cdd:TIGR00618 678 RQLALQKMQSEKEQLTYWKEMLAQCQTLLRELEThieeydREFNEIENASSSlGSDLAAREDALNQSLKELMHQARTVLK 757
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1280 E--VLHAKKKEISAKDEKELLHFS-IEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLndVERLKQALN 1356
Cdd:TIGR00618 758 ArtEAHFNNNEEVTAALQTGAELShLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETL--VQEEEQFLS 835
|
490 500 510
....*....|....*....|....*....|...
gi 1034591230 1357 GLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQ 1389
Cdd:TIGR00618 836 RLEEKSATLGEITHQLLKYEECSKQLAQLTQEQ 868
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
170-272 |
2.38e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 51.80 E-value: 2.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 170 IQLLCDHGASVNAKDVD-GRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISL 248
Cdd:PHA02878 150 TKLLLSYGADINMKDRHkGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA 229
|
90 100
....*....|....*....|....*...
gi 1034591230 249 LDALG----HDSSYYARigdNLDILTLL 272
Cdd:PHA02878 230 RDKCGntplHISVGYCK---DYDILKLL 254
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
505-1273 |
2.51e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.28 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 505 KEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAasgnhrLTEELKDQLKDLKVKYEGASAEVGKLR 584
Cdd:TIGR00618 159 KAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQL------LTLCTPCMPDTYHERKQVLEKELKHLR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 585 NQIKQnEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKkgrkvtemegqAKELSAKLALSIPAEKFENMKSSLSnevn 664
Cdd:TIGR00618 233 EALQQ-TQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEE-----------LRAQEAVLEETQERINRARKAAPLA---- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 665 EKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQksgelgkkitelTLKNQTLQKEIE-KVY 743
Cdd:TIGR00618 297 AHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQ------------TLHSQEIHIRDAhEVA 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 744 LDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVF 823
Cdd:TIGR00618 365 TSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCA 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 824 VPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQ------EKIHALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLA 897
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEqihlqeTRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPG 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 898 KTNRELLdvkkkfedinqefvKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQ 977
Cdd:TIGR00618 525 PLTRRMQ--------------RGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQ 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 978 EEIVTLHAEIKAQKKEldtiqecikvkyapivsfeecERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDK---LK 1054
Cdd:TIGR00618 591 NITVRLQDLTEKLSEA---------------------EDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKltaLH 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1055 KEIFTLQKDLRDKTVLIEKSHEMERALSRKtdelnKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPL 1134
Cdd:TIGR00618 650 ALQLTLTQERVREHALSIRVLPKELLASRQ-----LALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIE 724
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1135 EQVEALKKSLNGTIENLKEELKSMQRcyekEQQTVTKLHQLLENQKNSSVPLAEHLQIKEA--------FEKEVGIIKAS 1206
Cdd:TIGR00618 725 NASSSLGSDLAAREDALNQSLKELMH----QARTVLKARTEAHFNNNEEVTAALQTGAELShlaaeiqfFNRLREEDTHL 800
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1207 LREKEEESQNKME--------EVSKLQSEVQNTKQALKKLETR---------EVVDLSKYKATKSDLETQISSLNEKLAN 1269
Cdd:TIGR00618 801 LKTLEAEIGQEIPsdedilnlQCETLVQEEEQFLSRLEEKSATlgeithqllKYEECSKQLAQLTQEQAKIIQLSDKLNG 880
|
....
gi 1034591230 1270 LNRK 1273
Cdd:TIGR00618 881 INQI 884
|
|
| TRPV5-6 |
cd22192 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ... |
125-253 |
2.83e-06 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.
Pssm-ID: 411976 [Multi-domain] Cd Length: 609 Bit Score: 51.94 E-value: 2.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 125 LHLAAKYGHALCLQKLLQYNcpteHADLQ-----GRTALHDAAMADCPSSIQLLCDhgasvNAKDV----------DGRT 189
Cdd:cd22192 21 LLLAAKENDVQAIKKLLKCP----SCDLFqrgalGETALHVAALYDNLEAAVVLME-----AAPELvnepmtsdlyQGET 91
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 190 PLVLATQMSRPTICQLLIDRGADVNSRD------KQNRTALMLGCEY--------GCRDAVEVLIKNGADISLLDALG 253
Cdd:cd22192 92 ALHIAVVNQNLNLVRELIARGADVVSPRatgtffRPGPKNLIYYGEHplsfaacvGNEEIVRLLIEHGADIRAQDSLG 169
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
967-1418 |
3.23e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.69 E-value: 3.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 967 AEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKvKYAPIVSFEECERKFKATEKELKdQLSEQTQKYSVSEEEVKKN 1046
Cdd:COG4717 84 EEKEEEYAELQEELEELEEELEELEAELEELREELE-KLEKLLQLLPLYQELEALEAELA-ELPERLEELEERLEELREL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1047 KQENDKLKKEIFTLQKDLRDKtvLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKL--VEENAKQTSEILAVQ 1124
Cdd:COG4717 162 EEELEELEAELAELQEELEEL--LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELeeLEEELEQLENELEAA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1125 NLLQKQHVPLEQ---------VEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEA 1195
Cdd:COG4717 240 ALEERLKEARLLlliaaallaLLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEE 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1196 fekEVGIIKASLREKEEESQnkmEEVSKLQSEVQNTKQALKKLETREvvdlskYKATKSDLETQISSLnekLANLNRKYE 1275
Cdd:COG4717 320 ---ELEELLAALGLPPDLSP---EELLELLDRIEELQELLREAEELE------EELQLEELEQEIAAL---LAEAGVEDE 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1276 EVCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKslTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQAL 1355
Cdd:COG4717 385 EELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEA--LDEEELEEELEELEEELEELEEELEELREELAELEAEL 462
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034591230 1356 NGLsqltytsgnptkRQSQLIDTLQHQVKSLEQQLADADRQHQeVIAIYRTHLLSAAQGHMDE 1418
Cdd:COG4717 463 EQL------------EEDGELAELLQELEELKAELRELAEEWA-ALKLALELLEEAREEYREE 512
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
970-1270 |
5.73e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.09 E-value: 5.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 970 LANYRKGQEEIVTLHAEIKAQKKELDTIQecikvkyapivsfeecerkfkATEKELKDQLSEQTQKYSVSEEEVKKNKQE 1049
Cdd:COG1196 231 LLKLRELEAELEELEAELEELEAELEELE---------------------AELAELEAELEELRLELEELELELEEAQAE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1050 NDKLKKEIFTLQKDlrdktvlIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQK 1129
Cdd:COG1196 290 EYELLAELARLEQD-------IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1130 QhvpLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEvgiiKASLRE 1209
Cdd:COG1196 363 A---EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEA----LAELEE 435
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034591230 1210 KEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANL 1270
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL 496
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1017-1335 |
6.11e-06 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 50.60 E-value: 6.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1017 KFKATEKELKD---QLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRD--KTVLiEKSHEMERALsrktDELNKQ 1091
Cdd:PRK04778 99 RFRKAKHEINEiesLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRElrKSLL-ANRFSFGPAL----DELEKQ 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1092 LKDLSQKYTEVKNVKEklvEENAKQTSEILAVQ----NLLQKQ--HVPlEQVEALKKSLNGTIENLKEELKSMQRC-YEK 1164
Cdd:PRK04778 174 LENLEEEFSQFVELTE---SGDYVEAREILDQLeeelAALEQImeEIP-ELLKELQTELPDQLQELKAGYRELVEEgYHL 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1165 EQQTVTKLHQLLENQKNSSVPLAEHLQIKEAfEKEVGIIKA------SLREKEEESQNKMEE-VSKLQSEVQNTKQALKK 1237
Cdd:PRK04778 250 DHLDIEKEIQDLKEQIDENLALLEELDLDEA-EEKNEEIQEridqlyDILEREVKARKYVEKnSDTLPDFLEHAKEQNKE 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1238 LETR-EVVDLSkYKATKSDLETQiSSLNEKLANLNRKYEEVCEEVlhaKKKEISakdekellhFSieqEIKDQKERCDKS 1316
Cdd:PRK04778 329 LKEEiDRVKQS-YTLNESELESV-RQLEKQLESLEKQYDEITERI---AEQEIA---------YS---ELQEELEEILKQ 391
|
330
....*....|....*....
gi 1034591230 1317 LTTITELQRRIQESAKQIE 1335
Cdd:PRK04778 392 LEEIEKEQEKLSEMLQGLR 410
|
|
| PHA02798 |
PHA02798 |
ankyrin-like protein; Provisional |
170-268 |
6.11e-06 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222931 [Multi-domain] Cd Length: 489 Bit Score: 50.60 E-value: 6.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 170 IQLLCDHGASVNAKDVDGRTPLV-----LATQMSRPTICQLLIDRGADVNSRDKQNRTAL--MLGCEY-GCRDAVEVLIK 241
Cdd:PHA02798 54 VKLFINLGANVNGLDNEYSTPLCtilsnIKDYKHMLDIVKILIENGADINKKNSDGETPLycLLSNGYiNNLEILLFMIE 133
|
90 100
....*....|....*....|....*...
gi 1034591230 242 NGADISLLDALGHDS-SYYARIGDNLDI 268
Cdd:PHA02798 134 NGADTTLLDKDGFTMlQVYLQSNHHIDI 161
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
191-272 |
7.12e-06 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 45.88 E-value: 7.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 191 LVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGAdislLDALGHDSS--YYARIGDNLDI 268
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHAD----VNLKDNGRTalHYAARSGHLEI 76
|
....
gi 1034591230 269 LTLL 272
Cdd:pfam12796 77 VKLL 80
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
831-1361 |
8.97e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 50.46 E-value: 8.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 831 KEIIALKSNIVELKKQLSELKKKCGED-QEKIHALTSENTNLKKMMSNqyVPVKTHEEVKMTLNDTLAKtnreLLDVKKK 909
Cdd:COG5022 892 KSISSLKLVNLELESEIIELKKSLSSDlIENLEFKTELIARLKKLLNN--IDLEEGPSIEYVKLPELNK----LHEVESK 965
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 910 FEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQS---MRKVQDSNAEILANYRKGQEEIVTLHAE 986
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQEStkqLKELPVEVAELQSASKIISSESTELSIL 1045
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 987 IKAQK-------KELDTIQECIKVKYAPIVSFEEC------------ERKFKATEKELKDQ-----------LSEQTQKY 1036
Cdd:COG5022 1046 KPLQKlkgllllENNQLQARYKALKLRRENSLLDDkqlyqlestenlLKTINVKDLEVTNRnlvkpanvlqfIVAQMIKL 1125
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1037 SVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMER----ALSRKTDELNKQLKDLSQKYT----EVKNVKEK 1108
Cdd:COG5022 1126 NLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALpsppPFAALSEKRLYQSALYDEKSKlsssEVNDLKNE 1205
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1109 LVEENAKQTSEIL---AVQNLLQKQHVPLEQVEALKKSLNG----------TIENLKEELKSMQRCYEKEQQTVTKLHQL 1175
Cdd:COG5022 1206 LIALFSKIFSGWPrgdKLKKLISEGWVPTEYSTSLKGFNNLnkkfdtpasmSNEKLLSLLNSIDNLLSSYKLEEEVLPAT 1285
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1176 LENQ-KNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREvVDLSKYKATKS 1254
Cdd:COG5022 1286 INSLlQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFEISDVDEELEELIQAVKVLQLLK-DDLNKLDELLD 1364
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1255 DLETQissLNEKLANLNRKYEevCEEVLHAKKKEISAKDEkellhfsieqeikdqKERCDKSLTTITELQRRIQESAKQI 1334
Cdd:COG5022 1365 ACYSL---NPAEIQNLKSRYD--PADKENNLPKEILKKIE---------------ALLIKQELQLSLEGKDETEVHLSEI 1424
|
570 580
....*....|....*....|....*..
gi 1034591230 1335 EAKDNKITELLNDVERLKQALNGLSQL 1361
Cdd:COG5022 1425 FSEEKSLISLDRNSIYKEEVLSSLSAL 1451
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
170-246 |
9.53e-06 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 50.02 E-value: 9.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 170 IQLLCDHGASVNAKDVDGRTPLVLATQMS---RPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCR-DAVEVLIKNGAD 245
Cdd:PHA03095 30 VRRLLAAGADVNFRGEYGKTPLHLYLHYSsekVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTlDVIKLLIKAGAD 109
|
.
gi 1034591230 246 I 246
Cdd:PHA03095 110 V 110
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
513-1398 |
9.87e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.17 E-value: 9.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 513 KQLEDALKDVQKRMYESEGKVKQMQThfLALKEHLTSEAASGNHRLTEELKDQLKDLKVKYEGASAEvgkLRNQIKQNEM 592
Cdd:pfam01576 155 KLLEERISEFTSNLAEEEEKAKSLSK--LKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTD---LQEQIAELQA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 593 IVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLALSIPA-EKFENMKSSLSNEVnEKAKKLV 671
Cdd:pfam01576 230 QIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAArNKAEKQRRDLGEEL-EALKTEL 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 672 EMEREHEKSLSEIRQlKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKvylDNKLLKE 751
Cdd:pfam01576 309 EDTLDTTAAQQELRS-KREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEK---AKQALES 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 752 QAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVppeKHEK 831
Cdd:pfam01576 385 ENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNI---KLSK 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 832 EIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQyvpvkthEEVKMTLNDTLAKTNRELLDVKKKFE 911
Cdd:pfam01576 462 DVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEE-------EEAKRNVERQLSTLQAQLSDMKKKLE 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 912 DINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKV---QDSNAEILANYRKGQEEIVTLHAEIK 988
Cdd:pfam01576 535 EDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLlvdLDHQRQLVSNLEKKQKKFDQMLAEEK 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 989 AqkkeldtiqecIKVKYApivsfEECER-KFKATEKELKD-QLSEQTQKYSVSEEEVKKNkqeNDKLKKEIFTL--QKDL 1064
Cdd:pfam01576 615 A-----------ISARYA-----EERDRaEAEAREKETRAlSLARALEEALEAKEELERT---NKQLRAEMEDLvsSKDD 675
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1065 RDKTVlieksHEME---RALSRKTDELNKQLKDLSQkytevknvkEKLVEENAKQTSEIlavqnllqkqhvpleQVEALK 1141
Cdd:pfam01576 676 VGKNV-----HELErskRALEQQVEEMKTQLEELED---------ELQATEDAKLRLEV---------------NMQALK 726
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1142 KSLNGTIENLKEELKsmqrcyEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEV 1221
Cdd:pfam01576 727 AQFERDLQARDEQGE------EKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQL 800
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1222 SKLQSEVQNTKQALK--KLETREVVDLSKYKATKS-DLETQISSLNEKLANLNR-------KYEEVCEEVLHAKKKEISA 1291
Cdd:pfam01576 801 KKLQAQMKDLQRELEeaRASRDEILAQSKESEKKLkNLEAELLQLQEDLAASERarrqaqqERDELADEIASGASGKSAL 880
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1292 KDEKELLhfsiEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGL--------SQLTY 1363
Cdd:pfam01576 881 QDEKRRL----EARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLerqnkelkAKLQE 956
|
890 900 910
....*....|....*....|....*....|....*
gi 1034591230 1364 TSGNPTKRQSQLIDTLQHQVKSLEQQLADADRQHQ 1398
Cdd:pfam01576 957 MEGTVKSKFKSSIAALEAKIAQLEEQLEQESRERQ 991
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1023-1401 |
1.08e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.29 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1023 KELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEV 1102
Cdd:PRK01156 172 KDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMK 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1103 KNVKEKLVEENAKQTSEILAVQNL--LQKQHVPLEQVEALKK--------SLNGTIENLKEELKSMQRCYEKEQQTVTKL 1172
Cdd:PRK01156 252 NRYESEIKTAESDLSMELEKNNYYkeLEERHMKIINDPVYKNrnyindyfKYKNDIENKKQILSNIDAEINKYHAIIKKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1173 HQL-------LENQKNSSVPLAEHLQIKEAFEKEVGIIKA--SLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREv 1243
Cdd:PRK01156 332 SVLqkdyndyIKKKSRYDDLNNQILELEGYEMDYNSYLKSieSLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKE- 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1244 vdLSKYKATKSDLETQISSLNEKLANLNRKYEE---------------VCEEVLHAKKKEISAKD--------EKELLHF 1300
Cdd:PRK01156 411 --LNEINVKLQDISSKVSSLNQRIRALRENLDElsrnmemlngqsvcpVCGTTLGEEKSNHIINHynekksrlEEKIREI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1301 SIEQEIKDQKERCDKSLTTITELQ--RRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLT--------------YT 1364
Cdd:PRK01156 489 EIEVKDIDEKIVDLKKRKEYLESEeiNKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKnrykslkledldskRT 568
|
410 420 430
....*....|....*....|....*....|....*....
gi 1034591230 1365 SGNPTKRQSQLID--TLQHQVKSLEQQLADADRQHQEVI 1401
Cdd:PRK01156 569 SWLNALAVISLIDieTNRSRSNEIKKQLNDLESRLQEIE 607
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
510-742 |
1.29e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 510 EQIKQLEDALKDVQKRMYESEGKVKQMQthflalkehltseaasgnhRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQ 589
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALK-------------------KEEKALLKQLAALERRIAALARRIRALEQELAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 590 NEMIVEEFKRDEGKLIEENKRLQKELSmcEMERekkgrkVTEMEGQAKELSAKLALSIPAEKFENMK---------SSLS 660
Cdd:COG4942 81 LEAELAELEKEIAELRAELEAQKEELA--ELLR------ALYRLGRQPPLALLLSPEDFLDAVRRLQylkylaparREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 661 NEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKpeEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIE 740
Cdd:COG4942 153 EELRADLAELAALRAELEAERAELEALLAELEEERAALEALKA--ERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
..
gi 1034591230 741 KV 742
Cdd:COG4942 231 RL 232
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
965-1346 |
1.48e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 49.69 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 965 SNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIV-SFEECERKFKATEKELKDQLSEQTQK-------- 1035
Cdd:COG5022 804 SLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIqKFGRSLKAKKRFSLLKKETIYLQSAQrvelaerq 883
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1036 ---YSVSEEEVKKNKQENDKLKKEIF----TLQKDLRDKT-VLIEKSHEMERALS------------RKTDELNK----- 1090
Cdd:COG5022 884 lqeLKIDVKSISSLKLVNLELESEIIelkkSLSSDLIENLeFKTELIARLKKLLNnidleegpsieyVKLPELNKlheve 963
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1091 -QLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLngtiENLKEELKSMQRCYEKEQQTV 1169
Cdd:COG5022 964 sKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQL----KELPVEVAELQSASKIISSES 1039
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1170 TKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREKEEESQnkMEEVSKLQSEVQNTKQALKKLET---REVVDL 1246
Cdd:COG5022 1040 TELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQ--LESTENLLKTINVKDLEVTNRNLvkpANVLQF 1117
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1247 SKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTI-TELQR 1325
Cdd:COG5022 1118 IVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKsKLSSS 1197
|
410 420
....*....|....*....|.
gi 1034591230 1326 RIQESAKQIEAKDNKITELLN 1346
Cdd:COG5022 1198 EVNDLKNELIALFSKIFSGWP 1218
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1079-1295 |
1.59e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.06 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1079 RALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQnllqkqhvplEQVEALKKSLNGTIENLKEELKSM 1158
Cdd:COG3883 26 SELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQ----------AEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1159 QRcyekEQQTVTKLHQLLENQKNSSVplaehlqikeafekevgIIKASLREKEEESQNK-MEEVSKLQSEVQNTKQALKK 1237
Cdd:COG3883 96 YR----SGGSVSYLDVLLGSESFSDF-----------------LDRLSALSKIADADADlLEELKADKAELEAKKAELEA 154
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 1238 LETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVcEEVLHAKKKEISAKDEK 1295
Cdd:COG3883 155 KLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAA-EAQLAELEAELAAAEAA 211
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
510-708 |
1.62e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 510 EQIKQLEDALKDVQKrmYEsegKVKQMQTHFLALKEHLTSEAAsgnHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQ 589
Cdd:COG4913 249 EQIELLEPIRELAER--YA---AARERLAELEYLRAALRLWFA---QRRLELLEAELEELRAELARLEAELERLEARLDA 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 590 NEMIVEEFKR----DEGKLIEenkRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLALSIPA------------EKFE 653
Cdd:COG4913 321 LREELDELEAqirgNGGDRLE---QLEREIERLERELEERERRRARLEALLAALGLPLPASAEEfaalraeaaallEALE 397
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034591230 654 NMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKR-------ELENVKAKLAQHVKPEEHE 708
Cdd:COG4913 398 EELEALEEALAEAEAALRDLRRELRELEAEIASLERrksnipaRLLALRDALAEALGLDEAE 459
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
509-821 |
1.64e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 1.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 509 DEQIKQLE-DALKDVQKRMYESEGKVKQMQTHFLALKEhLTSEAASGNHRLtEELKDQLKDLKVKYEGASAEVGKLRNQI 587
Cdd:COG1196 199 ERQLEPLErQAEKAERYRELKEELKELEAELLLLKLRE-LEAELEELEAEL-EELEAELEELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 588 KQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLALsipaekfenmkssLSNEVNEKA 667
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE-------------LEEELEELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 668 KKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKP-EEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDN 746
Cdd:COG1196 344 EELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEElEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034591230 747 KLLKEQAHNLTIEMKNHyvpLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLET 821
Cdd:COG1196 424 EELEEALAELEEEEEEE---EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL 495
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
736-1379 |
1.71e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 49.66 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 736 QKEIEKvyldNKLLKEQAHNLTIEMKNHYVPLKVSEDM---KKSHDAIID---DLNRKLLDVTQKYTEK--KLEMEKLLL 807
Cdd:TIGR01612 1506 AKAIEK----NKELFEQYKKDVTELLNKYSALAIKNKFaktKKDSEIIIKeikDAHKKFILEAEKSEQKikEIKKEKFRI 1581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 808 ENDSLSKDVSRLETVFVPPEKHEKEIIALKsnIVELKKQLSELKKKCGEDQEKIHALT--SENTNLKKMMSNqyvpVKTH 885
Cdd:TIGR01612 1582 EDDAAKNDKSNKAAIDIQLSLENFENKFLK--ISDIKKKINDCLKETESIEKKISSFSidSQDTELKENGDN----LNSL 1655
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 886 EEVKMTLNDTlaKTNREllDVKKKFEDINQEFVKIKDKNEILKRNLE-NTQNQIKAEYISlaeHEAKMSSLSQSmrkVQD 964
Cdd:TIGR01612 1656 QEFLESLKDQ--KKNIE--DKKKELDELDSEIEKIEIDVDQHKKNYEiGIIEKIKEIAIA---NKEEIESIKEL---IEP 1725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 965 SNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKD-QLSEQTQKYSVSEEEV 1043
Cdd:TIGR01612 1726 TIENLISSFNTNDLEGIDPNEKLEEYNTEIGDIYEEFIELYNIIAGCLETVSKEPITYDEIKNtRINAQNEFLKIIEIEK 1805
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1044 KKNKQENDKLKKEIFTLQKDLRDKTvlieksHEMERALSRKTDELNKQLKDLSQKYTEVKN-VKEKLVEENAKQTSEILA 1122
Cdd:TIGR01612 1806 KSKSYLDDIEAKEFDRIINHFKKKL------DHVNDKFTKEYSKINEGFDDISKSIENVKNsTDENLLFDILNKTKDAYA 1879
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1123 vqNLLQKQHVP--------LEQVEALKKSLNGTIEN------LKEELKSMQRCYEKEQQTVTKLHQLLENQKNSsvplae 1188
Cdd:TIGR01612 1880 --GIIGKKYYSykdeaekiFINISKLANSINIQIQNnsgidlFDNINIAILSSLDSEKEDTLKFIPSPEKEPEI------ 1951
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1189 HLQIKEAFEKEVGIIKAS--LREKEEESQNKMEEVSKLQSEVQNTKqalkklETREVVDLSKYKATK--SDLETQISSLN 1264
Cdd:TIGR01612 1952 YTKIRDSYDTLLDIFKKSqdLHKKEQDTLNIIFENQQLYEKIQASN------ELKDTLSDLKYKKEKilNDVKLLLHKFD 2025
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1265 E--KLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKIT 1342
Cdd:TIGR01612 2026 ElnKLSCDSQNYDTILELSKQDKIKEKIDNYEKEKEKFGIDFDVKAMEEKFDNDIKDIEKFENNYKHSEKDNHDFSEEKD 2105
|
650 660 670
....*....|....*....|....*....|....*..
gi 1034591230 1343 ELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTL 1379
Cdd:TIGR01612 2106 NIIQSKKKLKELTEAFNTEIKIIEDKIIEKNDLIDKL 2142
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1052-1303 |
1.73e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.16 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1052 KLKK-EIFTLqKDLRDKTVliEKSHEMERA--LSRKTDELNKQLKDLSQKYTEVKNVKEKL--------VEENAKQTSEI 1120
Cdd:PRK05771 5 RMKKvLIVTL-KSYKDEVL--EALHELGVVhiEDLKEELSNERLRKLRSLLTKLSEALDKLrsylpklnPLREEKKKVSV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1121 LAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSmqrcYEKEQQTVTKLH------QLLENQKNSSVPLAEhlqIKE 1194
Cdd:PRK05771 82 KSLEELIKDVEEELEKIEKEIKELEEEISELENEIKE----LEQEIERLEPWGnfdldlSLLLGFKYVSVFVGT---VPE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1195 AFEKEVGIIKaSLREKEEESQNKMEE-----VSKLQSEVQNTkqALKKLETREVV---------DLSKYKATKSDLETQI 1260
Cdd:PRK05771 155 DKLEELKLES-DVENVEYISTDKGYVyvvvvVLKELSDEVEE--ELKKLGFERLEleeegtpseLIREIKEELEEIEKER 231
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1034591230 1261 SSLNEKLANLNRKYEE---VCEEVL--HAKKKEISAKDEKELLHFSIE 1303
Cdd:PRK05771 232 ESLLEELKELAKKYLEellALYEYLeiELERAEALSKFLKTDKTFAIE 279
|
|
| TRPV5-6 |
cd22192 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ... |
97-224 |
2.03e-05 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.
Pssm-ID: 411976 [Multi-domain] Cd Length: 609 Bit Score: 49.24 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 97 SKGNLECLNAILI-HGVDITTSDTAGRNALHLAAKYGHALCLQKLLQ-----YNCPTEHADLQGRTALHDAAMADCPSSI 170
Cdd:cd22192 26 KENDVQAIKKLLKcPSCDLFQRGALGETALHVAALYDNLEAAVVLMEaapelVNEPMTSDLYQGETALHIAVVNQNLNLV 105
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 171 QLLCDHGASVNAKDVD--------------GRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTAL 224
Cdd:cd22192 106 RELIARGADVVSPRATgtffrpgpknliyyGEHPLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVL 173
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
558-851 |
2.06e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.16 E-value: 2.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 558 LTEELKDQLKDLK-----------VKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKG 626
Cdd:COG1196 194 ILGELERQLEPLErqaekaeryreLKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 627 RKVTEMEGQAKELSAKL-ALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQH---- 701
Cdd:COG1196 274 LELEELELELEEAQAEEyELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAeeel 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 702 ----VKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHyvplkvsEDMKKSH 777
Cdd:COG1196 354 eeaeAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERL-------EEELEEL 426
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 778 DAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFvppEKHEKEIIALKSNIVELKKQLSELK 851
Cdd:COG1196 427 EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA---ALLEAALAELLEELAEAAARLLLLL 497
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1039-1273 |
2.17e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1039 SEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTS 1118
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1119 EILAVQNLLQKQHV---PLEQVEALKKSLNGtiENLKEELKSMQRcyekeqqtvtkLHQLLENQKNSSVPLAEHLQIKEA 1195
Cdd:COG4942 98 ELEAQKEELAELLRalyRLGRQPPLALLLSP--EDFLDAVRRLQY-----------LKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 1196 FEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRK 1273
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
459-940 |
2.73e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.95 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 459 NEILKKELEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDEQIKQL-------EDALKDVQKRMYESEG 531
Cdd:pfam05483 189 NNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLliqitekENKMKDLTFLLEESRD 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 532 KVKQMQ----------THFLALKEHLTSE----------AASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQNE 591
Cdd:pfam05483 269 KANQLEektklqdenlKELIEKKDHLTKEledikmslqrSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHS 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 592 MIVEEFKRDEGKLIE----ENKRLQK---ELSMCEMEREKKGRKVTEMEG--QAKELSAKLALSIPAEKfenmkSSLSNE 662
Cdd:pfam05483 349 FVVTEFEATTCSLEEllrtEQQRLEKnedQLKIITMELQKKSSELEEMTKfkNNKEVELEELKKILAED-----EKLLDE 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 663 vNEKAKKLVEMEREHEKSLSEIRQLK-RELENVKAKLAQHVKPEEHeqvksrLEQKSGELGKKITELTLKNQTLQKEIEK 741
Cdd:pfam05483 424 -KKQFEKIAEELKGKEQELIFLLQAReKEIHDLEIQLTAIKTSEEH------YLKEVEDLKTELEKEKLKNIELTAHCDK 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 742 VYLDNKLLKEQAHNLTIEMKNHYVPLKvseDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLET 821
Cdd:pfam05483 497 LLLENKELTQEASDMTLELKKHQEDII---NCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEE 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 822 vfvPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEevkmtlnDTLAKTNR 901
Cdd:pfam05483 574 ---NARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYE-------IKVNKLEL 643
|
490 500 510
....*....|....*....|....*....|....*....
gi 1034591230 902 ELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKA 940
Cdd:pfam05483 644 ELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKA 682
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
269-913 |
3.53e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 48.51 E-value: 3.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 269 LTLLKTASENTNKGRELWKKGPSLQQRNLTHMQDEVNVKSHQREHQN--IQDLEIENEDLKERLRKIQQEQRILLDKVng 346
Cdd:TIGR02168 353 LESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNneIERLEARLERLEDRRERLQQEIEELLKKL-- 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 347 LQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEALKNRFKYFESDHLGSGSHFSNRKEDMLLKQGQmymads 426
Cdd:TIGR02168 431 EEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGF------ 504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 427 qctSPGIPAHMQSRSMLRPLELSLPSQTSYSENeiLKKELEA----------MRTFcESAKQDRLKLQNELAHKVAECkA 496
Cdd:TIGR02168 505 ---SEGVKALLKNQSGLSGILGVLSELISVDEG--YEAAIEAalggrlqavvVENL-NAAKKAIAFLKQNELGRVTFL-P 577
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 497 LALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKeHLTSEAASGNHRLTEELKDQ----LKDLKVK 572
Cdd:TIGR02168 578 LDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGV-LVVDDLDNALELAKKLRPGYrivtLDGDLVR 656
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 573 YEG--------ASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLA 644
Cdd:TIGR02168 657 PGGvitggsakTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA 736
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 645 -LSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVkpEEHEQVKSRLEQKSGE--- 720
Cdd:TIGR02168 737 rLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK--EELKALREALDELRAEltl 814
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 721 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMknhyvpLKVSEDMKKSHDAiIDDLNRKLLDVTQKYTEKKL 800
Cdd:TIGR02168 815 LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDI------ESLAAEIEELEEL-IEELESELEALLNERASLEE 887
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 801 EMEKLLLENDSLSKDVSRLEtvfvppekhekeiialkSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQY- 879
Cdd:TIGR02168 888 ALALLRSELEELSEELRELE-----------------SKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYs 950
|
650 660 670
....*....|....*....|....*....|....
gi 1034591230 880 VPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDI 913
Cdd:TIGR02168 951 LTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
768-1141 |
3.61e-05 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 48.47 E-value: 3.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 768 KVSEDMKKSHDAIIDDLNRKLLDVTQKYTeKKLEMEKLLLENDSLSKDVSRLETVFvppEKHEKEIIALKSNIVELKKQL 847
Cdd:NF033838 73 EIQKSLDKRKHTQNVALNKKLSDIKTEYL-YELNVLKEKSEAELTSKTKKELDAAF---EQFKKDTLEPGKKVAEATKKV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 848 SELKKKCGEDQEKIHALTSENTnlkkmmsnqyvpVKTHEEVKMTLNDTLAKTNRELLDVKKKF----EDINQEFVKIKDK 923
Cdd:NF033838 149 EEAEKKAKDQKEEDRRNYPTNT------------YKTLELEIAESDVEVKKAELELVKEEAKEprdeEKIKQAKAKVESK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 924 NEILKRnLENTQNQIKAeyislAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKV 1003
Cdd:NF033838 217 KAEATR-LEKIKTDREK-----AEEEAKRRADAKLKEAVEKNVATSEQDKPKRRAKRGVLGEPATPDKKENDAKSSDSSV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1004 --------KYAPIVSFEECERKFKATEKELKDQLSEQTQKY----------SVSEEEVKKNKQENDKLKKEiftlQKDLR 1065
Cdd:NF033838 291 geetlpspSLKPEKKVAEAEKKVEEAKKKAKDQKEEDRRNYptntyktlelEIAESDVKVKEAELELVKEE----AKEPR 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1066 DKTVLIEKSHEMERALSRKT------DELNKQLKDLSQKYTEVKNVKEKLVEEnaKQTSEILAVQNLLQKQHVPLEQVEA 1139
Cdd:NF033838 367 NEEKIKQAKAKVESKKAEATrlekikTDRKKAEEEAKRKAAEEDKVKEKPAEQ--PQPAPAPQPEKPAPKPEKPAEQPKA 444
|
..
gi 1034591230 1140 LK 1141
Cdd:NF033838 445 EK 446
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
600-1311 |
4.75e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 48.12 E-value: 4.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 600 DEGKLIEENKRLQKELSMCE-MEREKKGRKVTEMEGQAKELSaklalSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHE 678
Cdd:TIGR01612 694 DKAKLDDLKSKIDKEYDKIQnMETATVELHLSNIENKKNELL-----DIIVEIKKHIHGEINKDLNKILEDFKNKEKELS 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 679 KSLSEIRQLKRELENVKAKLAQhVKPEEHEQ--VKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNL 756
Cdd:TIGR01612 769 NKINDYAKEKDELNKYKSKISE-IKNHYNDQinIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNK 847
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 757 TiemkNHYVPLK--VSEDMKKSHDAIIDDLNRKLLDVTQkytEKKLEMEKLLLENDSLSKDVSrletvfvppekheKEII 834
Cdd:TIGR01612 848 V----DKFINFEnnCKEKIDSEHEQFAELTNKIKAEISD---DKLNDYEKKFNDSKSLINEIN-------------KSIE 907
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 835 ALKSNIVELKKqLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEEVKMTLND----TLAKTNRELLDVKKK- 909
Cdd:TIGR01612 908 EEYQNINTLKK-VDEYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDkfdnTLIDKINELDKAFKDa 986
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 910 ----FEDINQEFVK-IKDKNEILKRNLENTQnqikaeYISLAEHEAKMSSLSQsmrKVQDSNAEI----LANYRKGQEEI 980
Cdd:TIGR01612 987 slndYEAKNNELIKyFNDLKANLGKNKENML------YHQFDEKEKATNDIEQ---KIEDANKNIpnieIAIHTSIYNII 1057
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 981 VTLHAEIKAQKKELDTiqECIKVKYAPIVSFEECERKFK---------------ATE-KELKDQLSEQTQK--YSVSEEE 1042
Cdd:TIGR01612 1058 DEIEKEIGKNIELLNK--EILEEAEINITNFNEIKEKLKhynfddfgkeenikyADEiNKIKDDIKNLDQKidHHIKALE 1135
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1043 VKKNKQEN--DKLKKEIFTLQkDLRDKTVLIEKSHEMERALSRKTDELNKQlkdlSQKYTEVKNVKEKLVEENAKQTS-E 1119
Cdd:TIGR01612 1136 EIKKKSENyiDEIKAQINDLE-DVADKAISNDDPEEIEKKIENIVTKIDKK----KNIYDEIKKLLNEIAEIEKDKTSlE 1210
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1120 ILAVQNLLQKQHVP---LEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLE------------------- 1177
Cdd:TIGR01612 1211 EVKGINLSYGKNLGklfLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDikaemetfnishdddkdhh 1290
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1178 -----NQKNSSVPLAEHLQIKEAFEKEVGI--IKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDlsKYK 1250
Cdd:TIGR01612 1291 iiskkHDENISDIREKSLKIIEDFSEESDIndIKKELQKNLLDAQKHNSDINLYLNEIANIYNILKLNKIKKIID--EVK 1368
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034591230 1251 ATKSDLETQISSLNEKLANLNRKYEEVCEEVlhaKKKEISAKDEKELLHFSIEQEIKDQKE 1311
Cdd:TIGR01612 1369 EYTKEIEENNKNIKDELDKSEKLIKKIKDDI---NLEECKSKIESTLDDKDIDECIKKIKE 1426
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
502-700 |
5.51e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.70 E-value: 5.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 502 ERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQthflalKEH----LTSEAASGNHRLTeELKDQLKDLKVKYEGAS 577
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALEEFR------QKNglvdLSEEAKLLLQQLS-ELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 578 AEVGKLRNQIKQNEMIVEEFKRDegkliEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLAlsipaekfeNMKS 657
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQS-----PVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIA---------ALRA 305
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1034591230 658 SLSNEVnekAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQ 700
Cdd:COG3206 306 QLQQEA---QRILASLEAELEALQAREASLQAQLAQLEARLAE 345
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1203-1429 |
7.24e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.32 E-value: 7.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1203 IKASLREKEEESQNKM----EEVSKLQSEVQNTKQALKKLETRE-VVDLSkykATKSDLETQISSLNEKLANLNRKYEEV 1277
Cdd:COG3206 162 LEQNLELRREEARKALefleEQLPELRKELEEAEAALEEFRQKNgLVDLS---EEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1278 ceEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNG 1357
Cdd:COG3206 239 --EARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILA 316
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 1358 LSQLTYTSGNPTKRQ-SQLIDTLQHQVKSL---EQQLADADRQHQEVIAIYRTHLLSAAQGHMDEDVQEALLQIIQ 1429
Cdd:COG3206 317 SLEAELEALQAREASlQAQLAQLEARLAELpelEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVRVID 392
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
967-1429 |
7.35e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.66 E-value: 7.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 967 AEILANYrKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERK--------FKATEKELKDQLSE--QTQKY 1036
Cdd:TIGR00618 166 KELLMNL-FPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDtyherkqvLEKELKHLREALQQtqQSHAY 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1037 SVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEmERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQ 1116
Cdd:TIGR00618 245 LTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQE-RINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSR 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1117 TSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQT-----VTKLHQLLENQKNSSVPLAEHLQ 1191
Cdd:TIGR00618 324 AKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHtltqhIHTLQQQKTTLTQKLQSLCKELD 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1192 IKEAFEKEVGIIKASLR---------EKEEESQNKMEEVSKLQSEVQNTKQALKKLE-------TREVVDLSKYKATKSD 1255
Cdd:TIGR00618 404 ILQREQATIDTRTSAFRdlqgqlahaKKQQELQQRYAELCAAAITCTAQCEKLEKIHlqesaqsLKEREQQLQTKEQIHL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1256 LETQISSLNEKLANLNRKYE-EVCEEVLH--AKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAK 1332
Cdd:TIGR00618 484 QETRKKAVVLARLLELQEEPcPLCGSCIHpnPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKE 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1333 QIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTL---------QHQVKSLEQQLADADRQHQEVIAI 1403
Cdd:TIGR00618 564 QMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLaceqhallrKLQPEQDLQDVRLHLQQCSQELAL 643
|
490 500
....*....|....*....|....*.
gi 1034591230 1404 YRTHLLSAAQGHMDEDVQEALLQIIQ 1429
Cdd:TIGR00618 644 KLTALHALQLTLTQERVREHALSIRV 669
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
509-719 |
8.41e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.93 E-value: 8.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 509 DEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASgNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIK 588
Cdd:PHA02562 187 DMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKT-IKAEIEELTDELLNLVMDIEDPSAALNKLNTAAA 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 589 QNEMIVEEFKRDE-----------------------GKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKlal 645
Cdd:PHA02562 266 KIKSKIEQFQKVIkmyekggvcptctqqisegpdriTKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLEL--- 342
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034591230 646 sipAEKFENMKSSLSNEVNEKAKKLVEMER---EHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSG 719
Cdd:PHA02562 343 ---KNKISTNKQSLITLVDKAKKVKAAIEElqaEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLKDSG 416
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
73-128 |
8.68e-05 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 41.56 E-value: 8.68e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 73 ILAKKGVNPGKLDVEGRSVFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLA 128
Cdd:pfam13857 1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
252-1084 |
8.72e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.02 E-value: 8.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 252 LGHDSSYYARIGDNLDILTLLKTASENTNKGRELWKKGPSLQQRNLTHMQDEVNVKSHQREHQNIQDLEIENEDLKERL- 330
Cdd:pfam05483 1 AGGDSNFFKSFNKCTEDDFEFPFAKSNLSKNGENIDSDPAFQKLNFLPMLEQVANSGDCHYQEGLKDSDFENSEGLSRLy 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 331 RKIQQEqrilldkvnglqlqlneevmvADDLESEREKLKSLLAAKEKQHEESLRTIEALKNRFKYFEsdhlgsgshFSNR 410
Cdd:pfam05483 81 SKLYKE---------------------AEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQ---------FENE 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 411 KEDMLLKQGQMYMADSqctspgipahMQSRSMLRPLELSLPSQTSYSENEILKKELEAmrtfcESAKQDRLKLQNELAHK 490
Cdd:pfam05483 131 KVSLKLEEEIQENKDL----------IKENNATRHLCNLLKETCARSAEKTKKYEYER-----EETRQVYMDLNNNIEKM 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 491 VAECKALALECERVKEDSDEQIKQLEDALKDVQKRmYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDLK 570
Cdd:pfam05483 196 ILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEE-YKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLE 274
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 571 VKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKEL-----SMCEMEREKKgrkvTEMEGQAKelsAKLAL 645
Cdd:pfam05483 275 EKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLqiatkTICQLTEEKE----AQMEELNK---AKAAH 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 646 SIPAEKFENMKSSLSN---------EVNEKAKKLVEMEREHEKS-LSEIRQLKR----ELENVKAKLAQHVKPEEHeqvK 711
Cdd:pfam05483 348 SFVVTEFEATTCSLEEllrteqqrlEKNEDQLKIITMELQKKSSeLEEMTKFKNnkevELEELKKILAEDEKLLDE---K 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 712 SRLEQKSGELGKKITELTLKNQTLQKEIekvyldnkllkeqaHNLTIEmknhyvpLKVSEDMKKSHDAIIDDLNRKLLDV 791
Cdd:pfam05483 425 KQFEKIAEELKGKEQELIFLLQAREKEI--------------HDLEIQ-------LTAIKTSEEHYLKEVEDLKTELEKE 483
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 792 TQKYTEKKLEMEKLLLENDSLSKDVSRLetvFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSE---- 867
Cdd:pfam05483 484 KLKNIELTAHCDKLLLENKELTQEASDM---TLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEfiqk 560
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 868 NTNLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAE 947
Cdd:pfam05483 561 GDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNK 640
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 948 HEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKyapivsfeeCERKFK---ATEKE 1024
Cdd:pfam05483 641 LELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKR---------CQHKIAemvALMEK 711
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1025 LKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRK 1084
Cdd:pfam05483 712 HKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEK 771
|
|
| CagA_N |
pfam18971 |
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial ... |
927-1178 |
1.14e-04 |
|
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial virulence determinant and critical for gastric carcinogenesis. X-ray crystallographic analysis of the N-terminal CagA fragment (residues 1-876) revealed that the region has a structure comprised of three discrete domains. Domain I constitutes a mobile CagA N terminus, while Domain II tethers CagA to the plasma membrane by interacting with membrane phosphatidylserine. Domain III interacts intramolecularly with the intrinsically disordered C-terminal region, and this interaction potentiates the pathogenic scaffold/hub function of CagA.
Pssm-ID: 408741 [Multi-domain] Cd Length: 876 Bit Score: 46.69 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 927 LKRNLENtqnQIKAEYISLAEHEAKMSSLSQSMRKVqdsnAEILANYRKGQEEIVTL--HAEIKAQKKELdtiqecikvk 1004
Cdd:pfam18971 557 VRRNLEN---KLTAKGLSLQEANKLIKDFLSSNKEL----AGKALNFNKAVAEAKSTgnYDEVKKAQKDL---------- 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1005 yapivsfEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQendklKKEIFTL--QKDLRDKTVL--IEKSHEMERA 1080
Cdd:pfam18971 620 -------EKSLRKREHLEKEVEKKLESKSGNKNKMEAKAQANSQ-----KDEIFALinKEANRDARAIayTQNLKGIKRE 687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1081 LSRKTDELNKQLKDLSQKYTEVKNVKEKlveENAKQTSEILAVQNLLQKQHVPLEQVEalkkslngTIENLKEELKSMQR 1160
Cdd:pfam18971 688 LSDKLEKISKDLKDFSKSFDEFKNGKNK---DFSKAEETLKALKGSVKDLGINPEWIS--------KVENLNAALNEFKN 756
|
250
....*....|....*...
gi 1034591230 1161 CYEKEQQTVTKLHQLLEN 1178
Cdd:pfam18971 757 GKNKDFSKVTQAKSDLEN 774
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
206-253 |
1.25e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 41.18 E-value: 1.25e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1034591230 206 LIDRG-ADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALG 253
Cdd:pfam13857 1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEG 49
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
882-1392 |
1.39e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 46.71 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 882 VKTHEEVKMTLNDTLAKTNRElldvKKKFEDINQEFVKIKDKNEILKRNLENTQNQikaeyislaeHEAKMSSLSQSMRK 961
Cdd:pfam01576 133 IKKLEEDILLLEDQNSKLSKE----RKLLEERISEFTSNLAEEEEKAKSLSKLKNK----------HEAMISDLEERLKK 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 962 VQDSNAEILANYRKGQEEIVTLHAEIKAQKKELdtiqecikvkyapivsfEECERKFKATEKELKDQLSEQTQKYSVSEE 1041
Cdd:pfam01576 199 EEKGRQELEKAKRKLEGESTDLQEQIAELQAQI-----------------AELRAQLAKKEEELQAALARLEEETAQKNN 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1042 EVKKNKQendkLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDL-----------SQKYTEVKNVKEKLV 1110
Cdd:pfam01576 262 ALKKIRE----LEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTldttaaqqelrSKREQEVTELKKALE 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1111 EENAKQTSEilaVQNLLQKQHVPLEQ--------------VEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLH-QL 1175
Cdd:pfam01576 338 EETRSHEAQ---LQEMRQKHTQALEElteqleqakrnkanLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEgQL 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1176 LENQKNSSVPLAEHLQIKEAFEK---EVGIIKASLREKEEESQNKMEEVSKLQSEVQNTkQALKKLETREvvdlskykat 1252
Cdd:pfam01576 415 QELQARLSESERQRAELAEKLSKlqsELESVSSLLNEAEGKNIKLSKDVSSLESQLQDT-QELLQEETRQ---------- 483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1253 KSDLETQISSLNEKLANLNRKYEEvceevlhakkkEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAK 1332
Cdd:pfam01576 484 KLNLSTRLRQLEDERNSLQEQLEE-----------EEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQR 552
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1333 QIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLAD 1392
Cdd:pfam01576 553 ELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAE 612
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
126-206 |
1.64e-04 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 46.04 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 126 HLAAKyGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQL 205
Cdd:PTZ00322 88 QLAAS-GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166
|
.
gi 1034591230 206 L 206
Cdd:PTZ00322 167 L 167
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
1010-1359 |
1.67e-04 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 46.17 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1010 SFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQEndklkkeifTLQKDLRDK-TVLIEKSHEMERALSRKTDEL 1088
Cdd:pfam05667 207 SLLERNAAELAAAQEWEEEWNSQGLASRLTPEEYRKRKRT---------KLLKRIAEQlRSAALAGTEATSGASRSAQDL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1089 NKQLKDLSQKYTEVKNV--------KEKLV--EENAKQTSEILAV----QNLLQKQHVPLEQVEALKKSLNGTIENLKEE 1154
Cdd:pfam05667 278 AELLSSFSGSSTTDTGLtkgsrfthTEKLQftNEAPAATSSPPTKveteEELQQQREEELEELQEQLEDLESSIQELEKE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1155 LKSMQrcyekeqQTVTKLHQLLENQKNSSVPLAEHLQIKEafeKEVGIIkaslrekeEESQNKMEevsKLQSEVQNTKQA 1234
Cdd:pfam05667 358 IKKLE-------SSIKQVEEELEELKEQNEELEKQYKVKK---KTLDLL--------PDAEENIA---KLQALVDASAQR 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1235 LKKLEtrevvdlSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEV--LHAKKKEISAK-DEKELLHfsieQEIKDQKE 1311
Cdd:pfam05667 417 LVELA-------GQWEKHRVPLIEEYRALKEAKSNKEDESQRKLEEIkeLREKIKEVAEEaKQKEELY----KQLVAEYE 485
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1034591230 1312 RCDKSlTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLS 1359
Cdd:pfam05667 486 RLPKD-VSRSAYTRRILEIVKNIKKQKEEITKILSDTKSLQKEINSLT 532
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
27-118 |
1.74e-04 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 42.03 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 27 LMKLAQKGegNLECNWKISDHAADWNKYDDR----LMKAAERGDVEKVTSILAKKGVNpgkLDVEGRSVFHVVTSKGNLE 102
Cdd:pfam12796 1 LHLAAKNG--NLELVKLLLENGADANLQDKNgrtaLHLAAKNGHLEIVKLLLEHADVN---LKDNGRTALHYAARSGHLE 75
|
90
....*....|....*.
gi 1034591230 103 CLNAILIHGVDITTSD 118
Cdd:pfam12796 76 IVKLLLEKGADINVKD 91
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
846-1351 |
1.79e-04 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 46.36 E-value: 1.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 846 QLSELKKKCGEDQEKIHALTSENTNLKKMMSNqyVPVKTHEEVkMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNE 925
Cdd:PTZ00440 985 KLDKEKDEWEHFKSEIDKLNVNYNILNKKIDD--LIKKQHDDI-IELIDKLIKEKGKEIEEKVDQYISLLEKMKTKLSSF 1061
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 926 ILKRNLENTQNQIKAEYISLAEHeaKMSSLsqsMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQ-------KKELDTIQ 998
Cdd:PTZ00440 1062 HFNIDIKKYKNPKIKEEIKLLEE--KVEAL---LKKIDENKNKLIEIKNKSHEHVVNADKEKNKQtehynkkKKSLEKIY 1136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 999 ECIKVKYAPIVSFEECERKFKATEK-----------ELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDlrdk 1067
Cdd:PTZ00440 1137 KQMEKTLKELENMNLEDITLNEVNEieieyerilidHIVEQINNEAKKSKTIMEEIESYKKDIDQVKKNMSKERND---- 1212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1068 tvlieksHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKlvEENAKQTSEILAVQNLLqkqHVPLEQVealkKSLNGT 1147
Cdd:PTZ00440 1213 -------HLTTFEYNAYYDKATASYENIEELTTEAKGLKGE--ANRSTNVDELKEIKLQV---FSYLQQV----IKENNK 1276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1148 IENLKEELKSMqrcyeKEQQTVTKLHQLLENQKNSSVPLAEH-LQIKEAFEKEVGIIKASLR--EKEEESQNKM---EEV 1221
Cdd:PTZ00440 1277 MENALHEIKNM-----YEFLISIDSEKILKEILNSTKKAEEFsNDAKKELEKTDNLIKQVEAkiEQAKEHKNKIygsLED 1351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1222 SKLQSEVQNTKQALKKL-ETREVVD--LSKYKATKSDLETQISSLNEKLANLNrkyeevceevLHAKKKEISAKDEKEll 1298
Cdd:PTZ00440 1352 KQIDDEIKKIEQIKEEIsNKRKEINkyLSNIKSNKEKCDLHVRNASRGKDKID----------FLNKHEAIEPSNSKE-- 1419
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1034591230 1299 hFSIeQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERL 1351
Cdd:PTZ00440 1420 -VNI-IKITDNINKCKQYSNEAMETENKADENNDSIIKYEKEITNILNNSSIL 1470
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
204-272 |
1.98e-04 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 46.04 E-value: 1.98e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034591230 204 QLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALGHDSSYYARIGDNLDILTLL 272
Cdd:PTZ00322 99 RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1090-1270 |
2.00e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 44.53 E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1090 KQLKDLSQKYTE---VKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSmqrcYEKEQ 1166
Cdd:COG1579 7 RALLDLQELDSEldrLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKK----YEEQL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1167 QTVTKLHQLlenqknssvplaehlqikEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDL 1246
Cdd:COG1579 83 GNVRNNKEY------------------EALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKK 144
|
170 180
....*....|....*....|....
gi 1034591230 1247 SKYKATKSDLETQISSLNEKLANL 1270
Cdd:COG1579 145 AELDEELAELEAELEELEAEREEL 168
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1231-1355 |
2.04e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.00 E-value: 2.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1231 TKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLnRKYEEVCEEVLHAKKKEIsAKDEKELLHFSIEQEIKDQK 1310
Cdd:COG2433 386 IEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERL-EAEVEELEAELEEKDERI-ERLERELSEARSEERREIRK 463
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1034591230 1311 ERcdksltTITELQRRIQESAKQIEAKDNKITELLNDVERLKQAL 1355
Cdd:COG2433 464 DR------EISRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
186-218 |
2.17e-04 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 39.97 E-value: 2.17e-04
10 20 30
....*....|....*....|....*....|....
gi 1034591230 186 DGRTPLVLA-TQMSRPTICQLLIDRGADVNSRDK 218
Cdd:pfam00023 1 DGNTPLHLAaGRRGNLEIVKLLLSKGADVNARDK 34
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1011-1374 |
2.31e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.73 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1011 FEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNK 1090
Cdd:pfam02463 165 SRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1091 QLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVT 1170
Cdd:pfam02463 245 LLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1171 KLHQLLENQKNSSVPLaehlqikEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYK 1250
Cdd:pfam02463 325 KAEKELKKEKEEIEEL-------EKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEEL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1251 ATKSDLETQISSLNEklanlNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQES 1330
Cdd:pfam02463 398 ELKSEEEKEAQLLLE-----LARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSED 472
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1034591230 1331 AKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQ 1374
Cdd:pfam02463 473 LLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALI 516
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
121-173 |
2.34e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 40.34 E-value: 2.34e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1034591230 121 GRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLL 173
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
515-716 |
2.60e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.53 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 515 LEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTE------ELKDQLKDLKVKYEGASAEVGKLRnQIK 588
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAElqeeleELEEELEELEAELEELREELEKLE-KLL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 589 QNEMIVEEFKRDEGKLIEENKRLQkELSMCEMEREKKGRKVTEMEGQAKELSAKLAlsipaEKFENMKSSLSNEVNEKAK 668
Cdd:COG4717 126 QLLPLYQELEALEAELAELPERLE-ELEERLEELRELEEELEELEAELAELQEELE-----ELLEQLSLATEEELQDLAE 199
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1034591230 669 KLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQ 716
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKE 247
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1070-1358 |
2.66e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.44 E-value: 2.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1070 LIEKSHEMERALSRKT--DELNKQLKDLSQKYTEVKNVKEKLvEENAKQTSEIlavQNLLQKQHVPLEQVEALKKSLNGT 1147
Cdd:PRK03918 140 ILESDESREKVVRQILglDDYENAYKNLGEVIKEIKRRIERL-EKFIKRTENI---EELIKEKEKELEEVLREINEISSE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1148 IENLKEELKSMqrcyEKEQQTVTKLHQLLENQKNSsvplaehlqiKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSE 1227
Cdd:PRK03918 216 LPELREELEKL----EKEVKELEELKEEIEELEKE----------LESLEGSKRKLEEKIRELEERIEELKKEIEELEEK 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1228 VQNTKQ---------ALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEevLHAKKKEIS---AKDEK 1295
Cdd:PRK03918 282 VKELKElkekaeeyiKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEE--LKKKLKELEkrlEELEE 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034591230 1296 ELLHFSIEQEIKDQKERCDKSLT--TITELQRRIQESAK---QIEAKDNKIT----ELLNDVERLKQALNGL 1358
Cdd:PRK03918 360 RHELYEEAKAKKEELERLKKRLTglTPEKLEKELEELEKakeEIEEEISKITarigELKKEIKELKKAIEEL 431
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1079-1340 |
2.76e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1079 RALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSM 1158
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1159 QRCYEKeqqtvtklhQLLENQKNSSVPLAEHLQIKEAFEkEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKkl 1238
Cdd:COG4942 103 KEELAE---------LLRALYRLGRQPPLALLLSPEDFL-DAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE-- 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1239 etrevvdlskykATKSDLETQISSLNEKLANLNrkyeevceevlhakkkeiSAKDEKELLHFSIEQEIKDQKERCDKSLT 1318
Cdd:COG4942 171 ------------AERAELEALLAELEEERAALE------------------ALKAERQKLLARLEKELAELAAELAELQQ 220
|
250 260
....*....|....*....|..
gi 1034591230 1319 TITELQRRIQESAKQIEAKDNK 1340
Cdd:COG4942 221 EAEELEALIARLEAEAAAAAER 242
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
509-686 |
2.77e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 509 DEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIK 588
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQLE 695
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 589 QNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAK-----ELSAKLALSIPAEKFENMKSSLSNEV 663
Cdd:COG4913 696 ELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARlelraLLEERFAAALGDAVERELRENLEERI 775
|
170 180
....*....|....*....|...
gi 1034591230 664 NEKAKKLVEMEREHEKSLSEIRQ 686
Cdd:COG4913 776 DALRARLNRAEEELERAMRAFNR 798
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
156-280 |
2.92e-04 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 44.95 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 156 TALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGAD----------------------- 212
Cdd:PHA02874 37 TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDtsilpipciekdmiktildcgid 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 213 VNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALGHDSSYYARIGDNLDILTLL--KTASENTN 280
Cdd:PHA02874 117 VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLleKGAYANVK 186
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1201-1432 |
3.11e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.31 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1201 GIIKasLREKEEESQNKMEEVS-------------------------------KLQSEVQNTKQALKKLETREV-VDLSK 1248
Cdd:COG1196 166 GISK--YKERKEEAERKLEATEenlerledilgelerqleplerqaekaeryrELKEELKELEAELLLLKLRELeAELEE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1249 YKATKSDLETQISSLNEKLANLNRKYEEVcEEVLHAKKKEISAKDEKELLHFS----IEQEIKDQKERCDKSLTTITELQ 1324
Cdd:COG1196 244 LEAELEELEAELEELEAELAELEAELEEL-RLELEELELELEEAQAEEYELLAelarLEQDIARLEERRRELEERLEELE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1325 RRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLADADRQhQEVIAIY 1404
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA-AAELAAQ 401
|
250 260
....*....|....*....|....*...
gi 1034591230 1405 RTHLLSAAQGHMDEdvQEALLQIIQMRQ 1432
Cdd:COG1196 402 LEELEEAEEALLER--LERLEEELEELE 427
|
|
| TRPV5-6 |
cd22192 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ... |
58-205 |
3.33e-04 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.
Pssm-ID: 411976 [Multi-domain] Cd Length: 609 Bit Score: 45.00 E-value: 3.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 58 LMKAAERGDVEKVTSILAKKGVNPGKLDVEGRSVFHVVTSKGNLEcLNAILIHGV------DITTSDTAGRNALHLAAKY 131
Cdd:cd22192 21 LLLAAKENDVQAIKKLLKCPSCDLFQRGALGETALHVAALYDNLE-AAVVLMEAApelvnePMTSDLYQGETALHIAVVN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 132 GHALCLQKLLQYNcptehADLQ-----------GRTAL-----HDAAMADCPSS---IQLLCDHGASVNAKDVDGRTPL- 191
Cdd:cd22192 100 QNLNLVRELIARG-----ADVVspratgtffrpGPKNLiyygeHPLSFAACVGNeeiVRLLIEHGADIRAQDSLGNTVLh 174
|
170
....*....|....
gi 1034591230 192 VLATQMSRPTICQL 205
Cdd:cd22192 175 ILVLQPNKTFACQM 188
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1019-1234 |
3.76e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.44 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1019 KATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRdktvliekshEMERALSRKTDELNKQLKDLSQK 1098
Cdd:COG3883 29 QAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIA----------EAEAEIEERREELGERARALYRS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1099 YTEVkNVKEKLVeeNAKQTSEIL----AVQNLLQKQHVPLEQVEALKKSLngtiENLKEELKSMQRCYEKEQQTVTKLHQ 1174
Cdd:COG3883 99 GGSV-SYLDVLL--GSESFSDFLdrlsALSKIADADADLLEELKADKAEL----EAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1175 LLENQKnssvplAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQA 1234
Cdd:COG3883 172 ELEAQQ------AEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAA 225
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
140-194 |
3.79e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 39.64 E-value: 3.79e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1034591230 140 LLQY-NCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLA 194
Cdd:pfam13857 1 LLEHgPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
781-1144 |
4.48e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.90 E-value: 4.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 781 IDDLN-RKLLDVTQKYTEKKLEMEKLLLENdslskdvsrletvfvppekhekeIIALKSNIVELKKQLSELKKKCGEDQE 859
Cdd:PRK11281 45 LDALNkQKLLEAEDKLVQQDLEQTLALLDK-----------------------IDRQKEETEQLKQQLAQAPAKLRQAQA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 860 KIHALTSENTN-LKKMMSNQYVPvktheevkmTLNDTLAKTNRELLDVKKKFEDINQEFVKikdkneiLKRNLENTQNQI 938
Cdd:PRK11281 102 ELEALKDDNDEeTRETLSTLSLR---------QLESRLAQTLDQLQNAQNDLAEYNSQLVS-------LQTQPERAQAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 939 KAEYISLAEHEAKMSSLSQSMRKVQDSNAEILanyrkgQEEIVTLHAEIKAQKKEL---DTIQECIKVKYapivsfEECE 1015
Cdd:PRK11281 166 YANSQRLQQIRNLLKGGKVGGKALRPSQRVLL------QAEQALLNAQNDLQRKSLegnTQLQDLLQKQR------DYLT 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1016 RKFKATEKELKD----------QLSEQTQKYSVSEEEVKKnKQENDKLKKEiftlqkdlrdktvlIEKSHEMERALSRKT 1085
Cdd:PRK11281 234 ARIQRLEHQLQLlqeainskrlTLSEKTVQEAQSQDEAAR-IQANPLVAQE--------------LEINLQLSQRLLKAT 298
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1034591230 1086 DELNkqlkDLSQKYTEVKNVKEklveenakqtseilavqNLLQKQHVPLEQVEALKKSL 1144
Cdd:PRK11281 299 EKLN----TLTQQNLRVKNWLD-----------------RLTQSERNIKEQISVLKGSL 336
|
|
| PHA02798 |
PHA02798 |
ankyrin-like protein; Provisional |
170-247 |
4.66e-04 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222931 [Multi-domain] Cd Length: 489 Bit Score: 44.44 E-value: 4.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 170 IQLLCDHGASVNAKDVDGRTPLVlaTQMSRPTICQL-----LIDRGADVNSRDKQNRTALMLGCEYGCR---DAVEVLIK 241
Cdd:PHA02798 92 VKILIENGADINKKNSDGETPLY--CLLSNGYINNLeillfMIENGADTTLLDKDGFTMLQVYLQSNHHidiEIIKLLLE 169
|
....*.
gi 1034591230 242 NGADIS 247
Cdd:PHA02798 170 KGVDIN 175
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
476-1131 |
4.80e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.96 E-value: 4.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 476 AKQDRLKLQNELAHKVAECKAL------------ALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLAL 543
Cdd:TIGR00618 251 AQEEQLKKQQLLKQLRARIEELraqeavleetqeRINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKR 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 544 KEHLTSEAASGNHRLTEEL-----------KDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQ 612
Cdd:TIGR00618 331 AAHVKQQSSIEEQRRLLQTlhsqeihirdaHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQA 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 613 KELSMCEMEREKKGRKV---TEMEGQAKELSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKR 689
Cdd:TIGR00618 411 TIDTRTSAFRDLQGQLAhakKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKA 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 690 ELENVKAKLAQHVKP----EEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYV 765
Cdd:TIGR00618 491 VVLARLLELQEEPCPlcgsCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQ 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 766 PLKVSEDMKKSHDAIIDDLnRKLLDVTQKYTEKKLEMEKLLLEndslskdVSRLETVFVPPEKHEKEIIALKSNIVE--- 842
Cdd:TIGR00618 571 SFSILTQCDNRSKEDIPNL-QNITVRLQDLTEKLSEAEDMLAC-------EQHALLRKLQPEQDLQDVRLHLQQCSQela 642
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 843 -LKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEEVKMTLND--TLAKTNRELLDVKKKFEDINQEFVK 919
Cdd:TIGR00618 643 lKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWkeMLAQCQTLLRELETHIEEYDREFNE 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 920 IKDKNEILKRNLeNTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEivTLHAEIKAQKKELDTIQE 999
Cdd:TIGR00618 723 IENASSSLGSDL-AAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELS--HLAAEIQFFNRLREEDTH 799
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1000 CIKVKYAPIvsfeECERKFKATEKELKDQLSEQtqkysvSEEEVKKNKQENDKLKKEIFTLQKDLRDKtvliekshemer 1079
Cdd:TIGR00618 800 LLKTLEAEI----GQEIPSDEDILNLQCETLVQ------EEEQFLSRLEEKSATLGEITHQLLKYEEC------------ 857
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 1034591230 1080 alSRKTDELNKQLKDLSQ--KYTEVKNVKEKLVEENA--KQTSEILAVQN-LLQKQH 1131
Cdd:TIGR00618 858 --SKQLAQLTQEQAKIIQlsDKLNGINQIKIQFDGDAliKFLHEITLYANvRLANQS 912
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
628-853 |
4.97e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.62 E-value: 4.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 628 KVTEMEGQAKELSAKLALSIPA----EKFENMKSSLSNEVNEKAKKLVEMEREhekslsEIRQLKRELENVKAKLAQHVK 703
Cdd:PHA02562 175 KIRELNQQIQTLDMKIDHIQQQiktyNKNIEEQRKKNGENIARKQNKYDELVE------EAKTIKAEIEELTDELLNLVM 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 704 PEEheqvksRLEQKSGELGKKITELTLKNQTLQKEIeKVYLDNKL-----------------LKEQAHNLTI---EMKNH 763
Cdd:PHA02562 249 DIE------DPSAALNKLNTAAAKIKSKIEQFQKVI-KMYEKGGVcptctqqisegpdritkIKDKLKELQHsleKLDTA 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 764 YVPLKVSEDMkkshdaiIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVppeKHEKEIIALKSNIVEL 843
Cdd:PHA02562 322 IDELEEIMDE-------FNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFV---DNAEELAKLQDELDKI 391
|
250
....*....|
gi 1034591230 844 KKQLSELKKK 853
Cdd:PHA02562 392 VKTKSELVKE 401
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
948-1337 |
5.05e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 5.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 948 HEAKMSSLSQ--SMRKVQDSNAEILANYRKGQEEIVTLHAEIK----AQKKELDTIQECIKVKYApiVSFEECERKFKAT 1021
Cdd:PTZ00121 1056 HEGKAEAKAHvgQDEGLKPSYKDFDFDAKEDNRADEATEEAFGkaeeAKKTETGKAEEARKAEEA--KKKAEDARKAEEA 1133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1022 EKELKDQLSEQTQKySVSEEEVKKNKQENDKLKKEIFTLQKDLRdKTVLIEKSHEMERALS-RKTDELNKqlKDLSQKYT 1100
Cdd:PTZ00121 1134 RKAEDARKAEEARK-AEDAKRVEIARKAEDARKAEEARKAEDAK-KAEAARKAEEVRKAEElRKAEDARK--AEAARKAE 1209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1101 EVKNVKEKLVEENAKQTSEILAVQNLLQKQHVP--LEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLEN 1178
Cdd:PTZ00121 1210 EERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAkkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEK 1289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1179 QKNSSVPLAEHLQIKEAFEKEVGIIKAS--LREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDL 1256
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKAdeAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAA 1369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1257 ETQISSLNEKLANLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEA 1336
Cdd:PTZ00121 1370 EKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449
|
.
gi 1034591230 1337 K 1337
Cdd:PTZ00121 1450 K 1450
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
547-756 |
5.16e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 5.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 547 LTSEAASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKG 626
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 627 RKVTEMEGQAKELSAKLALSIPA-EKFEN-------MKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKL 698
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRAlYRLGRqpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 699 AQhvKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNL 756
Cdd:COG4942 170 EA--ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEEL 225
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
153-184 |
5.73e-04 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 38.81 E-value: 5.73e-04
10 20 30
....*....|....*....|....*....|...
gi 1034591230 153 QGRTALHDAA-MADCPSSIQLLCDHGASVNAKD 184
Cdd:pfam00023 1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARD 33
|
|
| CagA_N |
pfam18971 |
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial ... |
1048-1333 |
6.09e-04 |
|
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial virulence determinant and critical for gastric carcinogenesis. X-ray crystallographic analysis of the N-terminal CagA fragment (residues 1-876) revealed that the region has a structure comprised of three discrete domains. Domain I constitutes a mobile CagA N terminus, while Domain II tethers CagA to the plasma membrane by interacting with membrane phosphatidylserine. Domain III interacts intramolecularly with the intrinsically disordered C-terminal region, and this interaction potentiates the pathogenic scaffold/hub function of CagA.
Pssm-ID: 408741 [Multi-domain] Cd Length: 876 Bit Score: 44.38 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1048 QENDKLKKEIFTLQKDLRDKTVLIEKS-----------------HEMERALsRKTDELNKQLKDLSQKYTEVKNVKEKLV 1110
Cdd:pfam18971 573 QEANKLIKDFLSSNKELAGKALNFNKAvaeakstgnydevkkaqKDLEKSL-RKREHLEKEVEKKLESKSGNKNKMEAKA 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1111 EENAkQTSEILAVQNLLQKQHVP----LEQVEALKKSLNGTIENLKEELKSMQRCYEKeqqtvtklhqlLENQKNSSVPL 1186
Cdd:pfam18971 652 QANS-QKDEIFALINKEANRDARaiayTQNLKGIKRELSDKLEKISKDLKDFSKSFDE-----------FKNGKNKDFSK 719
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1187 AEH-LQIKEAFEKEVGIikaslrekeeesqnKMEEVSKlqseVQNTKQALKKLETREVVDLSKYKATKSDLETQISS--L 1263
Cdd:pfam18971 720 AEEtLKALKGSVKDLGI--------------NPEWISK----VENLNAALNEFKNGKNKDFSKVTQAKSDLENSVKDviI 781
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034591230 1264 NEKLANlnrKYEEVCEEVLHAKKKEISAKDEK---ELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQ 1333
Cdd:pfam18971 782 NQKVTD---KVDNLNQAVSVAKAMGDFSRVEQvlaDLKNFSKEQLAQQAQKNEDFNTGKNSELYQSVKNSVNK 851
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1015-1181 |
6.13e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.15 E-value: 6.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1015 ERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKT--------- 1085
Cdd:PRK05771 74 EEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGNFDLDLSLLLGFKYvsvfvgtvp 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1086 -DELNKQLKDLSQKYTE-VKNVKEKLV------EENAKQTSEILAvQNLLQKQHVP--------LEQVEALKKSLNGTIE 1149
Cdd:PRK05771 154 eDKLEELKLESDVENVEyISTDKGYVYvvvvvlKELSDEVEEELK-KLGFERLELEeegtpselIREIKEELEEIEKERE 232
|
170 180 190
....*....|....*....|....*....|..
gi 1034591230 1150 NLKEELKSMQRCYEKEQQTVtklHQLLENQKN 1181
Cdd:PRK05771 233 SLLEELKELAKKYLEELLAL---YEYLEIELE 261
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
597-861 |
6.18e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.15 E-value: 6.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 597 FKRDEGKLIEEnkrLQKE-----LSMCEMEREKKGRKVTEMEGQAKELSAKL------ALSIPAEKFENMKSSLSNEVNE 665
Cdd:PRK05771 14 LKSYKDEVLEA---LHELgvvhiEDLKEELSNERLRKLRSLLTKLSEALDKLrsylpkLNPLREEKKKVSVKSLEELIKD 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 666 KAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQhVKP-------EEHEQVKSRLEQKSGELGKKITELTLKNQTLQKE 738
Cdd:PRK05771 91 VEEELEKIEKEIKELEEEISELENEIKELEQEIER-LEPwgnfdldLSLLLGFKYVSVFVGTVPEDKLEELKLESDVENV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 739 IEKVYLDNKL------LKEQAHNLTIEMKNH-YVPLKVSE------------DMKKSHDAIIDDLNRKLLDVTQKYTEKK 799
Cdd:PRK05771 170 EYISTDKGYVyvvvvvLKELSDEVEEELKKLgFERLELEEegtpselireikEELEEIEKERESLLEELKELAKKYLEEL 249
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034591230 800 LEMEKLLL----ENDSLSKDVSRLETVFVP---PEKHEKEIIALKSNIVELKKQLSELKKKcgEDQEKI 861
Cdd:PRK05771 250 LALYEYLEieleRAEALSKFLKTDKTFAIEgwvPEDRVKKLKELIDKATGGSAYVEFVEPD--EEEEEV 316
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1212-1356 |
6.97e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 6.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1212 EESQNKMEEVSKLQSEVQNTKQALKKLEtREVVDLSK----YKATKSDLETQISSLNEKLANLNRKYEEVCEEVLHAKKK 1287
Cdd:COG1579 3 PEDLRALLDLQELDSELDRLEHRLKELP-AELAELEDelaaLEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQ 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034591230 1288 EISAKDEKELLhfSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALN 1356
Cdd:COG1579 82 LGNVRNNKEYE--ALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD 148
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1204-1399 |
7.78e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.67 E-value: 7.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1204 KASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLEtrevVDLSKYKATKSDLETQISSLNEKLAnlnRKYEEVCEEVLH 1283
Cdd:COG3883 22 QKELSELQAELEAAQAELDALQAELEELNEEYNELQ----AELEALQAEIDKLQAEIAEAEAEIE---ERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1284 AKKKE---------ISAKDEKELLH--FSIEQEIKDQKERcdksLTTITELQRRIQESAKQIEAKDNKITELLNDVERLK 1352
Cdd:COG3883 95 LYRSGgsvsyldvlLGSESFSDFLDrlSALSKIADADADL----LEELKADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1034591230 1353 QALNGLsqltytsgnpTKRQSQLIDTLQHQVKSLEQQLADADRQHQE 1399
Cdd:COG3883 171 AELEAQ----------QAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1148-1359 |
8.84e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.76 E-value: 8.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1148 IENLKEELKSMQ-RCYEKEQQTVTKLHQLLENQKNssvplAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQS 1226
Cdd:PRK05771 33 IEDLKEELSNERlRKLRSLLTKLSEALDKLRSYLP-----KLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEE 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1227 EVQNTKQALKKLEtREVVDLSKYKATKSDLETQISSLN----------EKLANLNRKYEEVCEEVLHAKK---------- 1286
Cdd:PRK05771 108 EISELENEIKELE-QEIERLEPWGNFDLDLSLLLGFKYvsvfvgtvpeDKLEELKLESDVENVEYISTDKgyvyvvvvvl 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1287 KEISAKDEKELLHFS-IEQEIKDQK---ERCDKSLTTITELQRRIQESAKQIEAKDNKITE--------LLNDVERLKQA 1354
Cdd:PRK05771 187 KELSDEVEEELKKLGfERLELEEEGtpsELIREIKEELEEIEKERESLLEELKELAKKYLEellalyeyLEIELERAEAL 266
|
....*
gi 1034591230 1355 LNGLS 1359
Cdd:PRK05771 267 SKFLK 271
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1245-1402 |
8.94e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1245 DLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEEVLhakkkeisakdekellhfSIEQEIKDQKERcdkslttITELQ 1324
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYN------------------ELQAELEALQAE-------IDKLQ 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1325 RRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTyTSGNP-------------TKRQSQLIDTLQHQVKSLEQQLA 1391
Cdd:COG3883 72 AEIAEAEAEIEERREELGERARALYRSGGSVSYLDVLL-GSESFsdfldrlsalskiADADADLLEELKADKAELEAKKA 150
|
170
....*....|.
gi 1034591230 1392 DADRQHQEVIA 1402
Cdd:COG3883 151 ELEAKLAELEA 161
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1140-1312 |
1.03e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1140 LKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLhQLLENQKnssvplaEHLQIKEAFEKEVGIIKASLREKEEESQNKME 1219
Cdd:PRK12704 25 RKKIAEAKIKEAEEEAKRILEEAKKEAEAIKKE-ALLEAKE-------EIHKLRNEFEKELRERRNELQKLEKRLLQKEE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1220 EVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKL---ANLNRkyEEVCEEVLHAKKKEisAKDEKE 1296
Cdd:PRK12704 97 NLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELeriSGLTA--EEAKEILLEKVEEE--ARHEAA 172
|
170
....*....|....*.
gi 1034591230 1297 LLHFSIEQEIKDQKER 1312
Cdd:PRK12704 173 VLIKEIEEEAKEEADK 188
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
175-224 |
1.05e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 38.48 E-value: 1.05e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1034591230 175 DHG-ASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTAL 224
Cdd:pfam13857 3 EHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTAL 53
|
|
| PHA02946 |
PHA02946 |
ankyin-like protein; Provisional |
170-247 |
1.09e-03 |
|
ankyin-like protein; Provisional
Pssm-ID: 165256 [Multi-domain] Cd Length: 446 Bit Score: 43.12 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 170 IQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTAL--MLGCEYGCRDAVEVLIKNGADIS 247
Cdd:PHA02946 55 VEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLyyLSGTDDEVIERINLLVQYGAKIN 134
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
271-623 |
1.11e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.74 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 271 LLKTASENTNKGRELWKKGPSLQQRNlTHMQDEVNVKSHQR-EHQNIQDLEI-ENEDLKERLRKIQQEQRI-LLDKVNGL 347
Cdd:PLN02939 65 LQSNTDENGQLENTSLRTVMELPQKS-TSSDDDHNRASMQRdEAIAAIDNEQqTNSKDGEQLSDFQLEDLVgMIQNAEKN 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 348 QLQLNEEVMVA-DDLE---SEREKL----------------KSLLAAKEKQHEESLRtiEALKNRFKYFESDHLGSGSHF 407
Cdd:PLN02939 144 ILLLNQARLQAlEDLEkilTEKEALqgkinilemrlsetdaRIKLAAQEKIHVEILE--EQLEKLRNELLIRGATEGLCV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 408 SN--------RKEDMLLKQGQMYM----ADSQCTSPGIPAHMQSRSMLRPLELSLPSQTSYSENEILKkeLEAMRTFCES 475
Cdd:PLN02939 222 HSlskeldvlKEENMLLKDDIQFLkaelIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSK--LSPLQYDCWW 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 476 AKQDRLKLQNELAHKVAECKALALECERvkeDSDEQIKQLEDALKdvqkrmyesEGKVKQMQTHFLALkehltseaasgn 555
Cdd:PLN02939 300 EKVENLQDLLDRATNQVEKAALVLDQNQ---DLRDKVDKLEASLK---------EANVSKFSSYKVEL------------ 355
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 556 hrlteeLKDQLKDLKVKYEGASAEVgklRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMERE 623
Cdd:PLN02939 356 ------LQQKLKLLEERLQASDHEI---HSYIQLYQESIKEFQDTLSKLKEESKKRSLEHPADDMPSE 414
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
112-159 |
1.13e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 38.48 E-value: 1.13e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1034591230 112 VDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALH 159
Cdd:pfam13857 7 IDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALD 54
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1018-1312 |
1.25e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1018 FKATEK--ELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKdlrdktvlIEKSHEME---RALSRKTDELNKQL 1092
Cdd:COG4913 606 FDNRAKlaALEAELAELEEELAEAEERLEALEAELDALQERREALQR--------LAEYSWDEidvASAEREIAELEAEL 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1093 KDLSQKYTEVKNVKEKLVEenakqtseilavqnlLQKQhvpLEQVEALKKSLNGTIENLKEELKSMQRcyekEQQTVTkl 1172
Cdd:COG4913 678 ERLDASSDDLAALEEQLEE---------------LEAE---LEELEEELDELKGEIGRLEKELEQAEE----ELDELQ-- 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1173 HQLLENQKNSSVPLAEHLQikEAFEkevgiikaslREKEEESQNKMEEvsKLQSEVQNTKQALKKLETReVVDL-----S 1247
Cdd:COG4913 734 DRLEAAEDLARLELRALLE--ERFA----------AALGDAVERELRE--NLEERIDALRARLNRAEEE-LERAmrafnR 798
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034591230 1248 KYKATKSDLETQISSLNEKLAnlnrKYEEVCEEVLHAKKKEI------SAKDEKELLHFSIEQEIKDQKER 1312
Cdd:COG4913 799 EWPAETADLDADLESLPEYLA----LLDRLEEDGLPEYEERFkellneNSIEFVADLLSKLRRAIREIKER 865
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
506-739 |
1.45e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.11 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 506 EDSDEQIKQLEDALKDVQKRMYESEGKVKQMqthflalkehltsEAASgnhrlteELKDQLKDLKVKYEGASAEVGKLRN 585
Cdd:PRK02224 471 EEDRERVEELEAELEDLEEEVEEVEERLERA-------------EDLV-------EAEDRIERLEERREDLEELIAERRE 530
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 586 QIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLalsipaEKFENMKSSLS----- 660
Cdd:PRK02224 531 TIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI------ESLERIRTLLAaiada 604
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 661 ----NEVNEKAKKLVEMEREHEKSLSEIRQLKRELEnvkAKLaQHVKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQ 736
Cdd:PRK02224 605 edeiERLREKREALAELNDERRERLAEKRERKRELE---AEF-DEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQ 680
|
...
gi 1034591230 737 KEI 739
Cdd:PRK02224 681 AEI 683
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
797-1353 |
1.80e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 42.89 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 797 EKKLEMEKLLLE---NDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKK----CGEDQEKIHALTSENT 869
Cdd:pfam10174 203 QKEKENIHLREElhrRNQLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTNgllhTEDREEEIKQMEVYKS 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 870 NLKKMMSNQyvpvkthEEVKMTLNdtlaKTNRELLDVKKKFEDINQEFVKIKDKNEILKRNL---ENTQNQIKAEYISL- 945
Cdd:pfam10174 283 HSKFMKNKI-------DQLKQELS----KKESELLALQTKLETLTNQNSDCKQHIEVLKESLtakEQRAAILQTEVDALr 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 946 AEHEAKMSSLSQSMRKVQDSnaeilanyrkgQEEIVTLHAEIKAQKKELDtiqecikVKyapivsfeecERKFKATEKE- 1024
Cdd:pfam10174 352 LRLEEKESFLNKKTKQLQDL-----------TEEKSTLAGEIRDLKDMLD-------VK----------ERKINVLQKKi 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1025 --LKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEK-SHEMERALSRKTDELNKQLKDLsqkyte 1101
Cdd:pfam10174 404 enLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKERIIERlKEQREREDRERLEELESLKKEN------ 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1102 vKNVKEKLVeenakqtseilAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVTKLhqllENQKN 1181
Cdd:pfam10174 478 -KDLKEKVS-----------ALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKL----ENQLK 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1182 SSVPLAEHLQIKEAFEKEVgiikaslREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQIS 1261
Cdd:pfam10174 542 KAHNAEEAVRTNPEINDRI-------RLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELESLTLRQMK 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1262 SLNEKLANLNRKYEEvcEEVLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKI 1341
Cdd:pfam10174 615 EQNKKVANIKHGQQE--MKKKGAQLLEEARRREDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHL 692
|
570
....*....|..
gi 1034591230 1342 TELlnDVERLKQ 1353
Cdd:pfam10174 693 TNL--RAERRKQ 702
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
54-104 |
1.90e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 37.64 E-value: 1.90e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1034591230 54 YDDRLMKAAERGDVEkVTSILAKKGVNPGKLDVEGRSVFHVVTSKGNLECL 104
Cdd:pfam13637 1 ELTALHAAAASGHLE-LLRLLLEKGADINAVDGNGETALHFAASNGNVEVL 50
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
560-705 |
2.10e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 560 EELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEF----KRDEGKLieENKRLQKELSMCEMEREKKGRKVTEMEGQ 635
Cdd:COG1579 34 AELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVeariKKYEEQL--GNVRNNKEYEALQKEIESLKRRISDLEDE 111
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 636 AKELSAKLalsipaEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPE 705
Cdd:COG1579 112 ILELMERI------EELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPE 175
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1015-1165 |
2.46e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.07 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1015 ERKFKATEKELKDQLSE-QTQKYSVSEEEVKKNKQENDKLK-----------KEIFTLQKDLRDKTVLIEKSHEmerALS 1082
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEaKKEAEAIKKEALLEAKEEIHKLRnefekelrerrNELQKLEKRLLQKEENLDRKLE---LLE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1083 RKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKqhvpleqvEALKKSLNGTIENLKEELKSMQRCY 1162
Cdd:PRK12704 107 KREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAE--------EAKEILLEKVEEEARHEAAVLIKEI 178
|
...
gi 1034591230 1163 EKE 1165
Cdd:PRK12704 179 EEE 181
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1070-1212 |
2.52e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.51 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1070 LIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKqtseilavqnLLQKQHVPLEQ-VEALKKSLNGTI 1148
Cdd:PRK00409 521 LIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDK----------LLEEAEKEAQQaIKEAKKEADEII 590
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 1149 ENLkeelksmqRCYEKEQQTVTKLHQLLENQKNssvpLAEHLQIKEAFEKEVGIIKASLREKEE 1212
Cdd:PRK00409 591 KEL--------RQLQKGGYASVKAHELIEARKR----LNKANEKKEKKKKKQKEKQEELKVGDE 642
|
|
| Ank_3 |
pfam13606 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
220-247 |
2.54e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.
Pssm-ID: 463933 [Multi-domain] Cd Length: 30 Bit Score: 36.85 E-value: 2.54e-03
10 20
....*....|....*....|....*...
gi 1034591230 220 NRTALMLGCEYGCRDAVEVLIKNGADIS 247
Cdd:pfam13606 2 GNTPLHLAARNGRLEIVKLLLENGADIN 29
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
578-1236 |
2.57e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 578 AEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELsmcemerekkgRKVTEMEGQAKELSAKLAlsipaekfenmks 657
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQL-----------QAETELCAEAEEMRARLA------------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 658 slsnevnEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKP-----EEHEQVKSRLEQKSGELGKKITELTLKN 732
Cdd:pfam01576 68 -------ARKQELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDleeqlDEEEAARQKLQLEKVTTEAKIKKLEEDI 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 733 QTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLldvtQKYTEKKLEMEKLllendsl 812
Cdd:pfam01576 141 LLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERL----KKEEKGRQELEKA------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 813 skdvsrletvfvpPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALtsentnlkkmmsnqyvpvKTHEEVKMTL 892
Cdd:pfam01576 210 -------------KRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAA------------------LARLEEETAQ 258
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 893 NDTLAKTNRELL-DVKKKFEDINQEFVKiKDKNEILKRNLENTQNQIKAEyislaeheakmsslsqsMRKVQDSNAEILA 971
Cdd:pfam01576 259 KNNALKKIRELEaQISELQEDLESERAA-RNKAEKQRRDLGEELEALKTE-----------------LEDTLDTTAAQQE 320
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 972 NYRKGQEEIVTLHAEIKAQKKELDTiqecikvkyapivSFEECERKFKATEKELKDQLsEQTQKYSVSEEevkKNKQend 1051
Cdd:pfam01576 321 LRSKREQEVTELKKALEEETRSHEA-------------QLQEMRQKHTQALEELTEQL-EQAKRNKANLE---KAKQ--- 380
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1052 KLKKEIFTLQKDLRdktVLIEKSHEMERalsrKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQ--- 1128
Cdd:pfam01576 381 ALESENAELQAELR---TLQQAKQDSEH----KRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNeae 453
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1129 -KQHVPLEQVEALKKSLNGTIENLKEELKsmqrcyeKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASL 1207
Cdd:pfam01576 454 gKNIKLSKDVSSLESQLQDTQELLQEETR-------QKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQL 526
|
650 660 670
....*....|....*....|....*....|....*.
gi 1034591230 1208 R------EKEEESQNKMEEVSK-LQSEVQNTKQALK 1236
Cdd:pfam01576 527 SdmkkklEEDAGTLEALEEGKKrLQRELEALTQQLE 562
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
457-754 |
2.65e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 42.31 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 457 SENEILKKELEAMRTFCESAKQDRLklqnELAHKVAECKALALECERVKEDSDEQIKQ--LEDALKDVQKRMYESEGKVK 534
Cdd:NF033838 111 SEAELTSKTKKELDAAFEQFKKDTL----EPGKKVAEATKKVEEAEKKAKDQKEEDRRnyPTNTYKTLELEIAESDVEVK 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 535 QMQTHFLALKEHLTSEaasgnhrlteelKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGklIEENKRLQKE 614
Cdd:NF033838 187 KAELELVKEEAKEPRD------------EEKIKQAKAKVESKKAEATRLEKIKTDREKAEEEAKRRAD--AKLKEAVEKN 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 615 LSMCEMEREKKGRKVTEMEGQA----KELSAKLALSIPAEkfENMKS-SLSNE--VNEKAKKLVEMER------------ 675
Cdd:NF033838 253 VATSEQDKPKRRAKRGVLGEPAtpdkKENDAKSSDSSVGE--ETLPSpSLKPEkkVAEAEKKVEEAKKkakdqkeedrrn 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 676 ---------EHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKkiteltlknqtlqkeIEKVYLDN 746
Cdd:NF033838 331 yptntyktlELEIAESDVKVKEAELELVKEEAKEPRNEEKIKQAKAKVESKKAEATR---------------LEKIKTDR 395
|
....*...
gi 1034591230 747 KLLKEQAH 754
Cdd:NF033838 396 KKAEEEAK 403
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1046-1413 |
2.74e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1046 NKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYtevknvkeklveenakqtseilavqn 1125
Cdd:PRK04863 277 HANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDY-------------------------- 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1126 llqkqhvpleqvealkkslngtiENLKEELKSMQ---RCYEKEQQTVTKLHQLLENqknssvpLAEHLQIKEafekEVGI 1202
Cdd:PRK04863 331 -----------------------QAASDHLNLVQtalRQQEKIERYQADLEELEER-------LEEQNEVVE----EADE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1203 IKASLREKEEESQnkmEEVSKLQSEVQNTKQALKKLETRE------VVDLSKYKATKSDLETQISSLNEKLANLNRKYEE 1276
Cdd:PRK04863 377 QQEENEARAEAAE---EEVDELKSQLADYQQALDVQQTRAiqyqqaVQALERAKQLCGLPDLTADNAEDWLEEFQAKEQE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1277 VCEEVLHAKKKeisakdekellhFSIEQEIKDQKERCDKSLTTIT-------------ELQRRIQES---AKQIEAKDNK 1340
Cdd:PRK04863 454 ATEELLSLEQK------------LSVAQAAHSQFEQAYQLVRKIAgevsrseawdvarELLRRLREQrhlAEQLQQLRMR 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1341 ITEL------LNDVERLKQALNGLSQLTYTS----GNPTKRQSQLIDTLQHQVKSLEQQLADAdRQHQEVIAIYRTHLLS 1410
Cdd:PRK04863 522 LSELeqrlrqQQRAERLLAEFCKRLGKNLDDedelEQLQEELEARLESLSESVSEARERRMAL-RQQLEQLQARIQRLAA 600
|
...
gi 1034591230 1411 AAQ 1413
Cdd:PRK04863 601 RAP 603
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
985-1120 |
2.97e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.07 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 985 AEIKAQKKELDTIQECIKVKyapivsfEECERKFKATEKELKDQLSEQTQKysvsEEEVKKNKQENDKLKKEIFTLQKDL 1064
Cdd:PRK12704 51 AEAIKKEALLEAKEEIHKLR-------NEFEKELRERRNELQKLEKRLLQK----EENLDRKLELLEKREEELEKKEKEL 119
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034591230 1065 RDKTVLIEKsheMERALSRKTDELNKQLKDLSQKYTE------VKNVKEKLVEENAKQTSEI 1120
Cdd:PRK12704 120 EQKQQELEK---KEEELEELIEEQLQELERISGLTAEeakeilLEKVEEEARHEAAVLIKEI 178
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
457-699 |
3.62e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.85 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 457 SENEILKKELEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDE---QIKQLEDALKDVQKRMYESEGKV 533
Cdd:COG1196 267 AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEEleeELAELEEELEELEEELEELEEEL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 534 KQMQTHFLALKEHLTS--EAASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRL 611
Cdd:COG1196 347 EEAEEELEEAEAELAEaeEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 612 QKELsmcemerekkgrkvtemegqAKELSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKREL 691
Cdd:COG1196 427 EEAL--------------------AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL 486
|
....*...
gi 1034591230 692 ENVKAKLA 699
Cdd:COG1196 487 AEAAARLL 494
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
187-240 |
3.68e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 36.87 E-value: 3.68e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 187 GRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEYGCRDAVEVLI 240
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
828-1388 |
3.80e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.96 E-value: 3.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 828 KHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMmsnqyVPVKTHEEVKMTLNDTLAKTNRelLDVK 907
Cdd:TIGR01612 576 HLEKEIKDLFDKYLEIDDEIIYINKLKLELKEKIKNISDKNEYIKKA-----IDLKKIIENNNAYIDELAKISP--YQVP 648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 908 KKFEDINQEFVKIKDK-NEILKRNLENTQNQ----IKAEYISLAEHEAKMSSLSQSMRKVQD--SNAEI------LANYR 974
Cdd:TIGR01612 649 EHLKNKDKIYSTIKSElSKIYEDDIDALYNElssiVKENAIDNTEDKAKLDDLKSKIDKEYDkiQNMETatvelhLSNIE 728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 975 KGQEEIVTLHAEIKAQ-----KKELDTIQECIKVKYAPIVS-------FEECERKFKATEKELKDQLSEQTQKYSVSEEE 1042
Cdd:TIGR01612 729 NKKNELLDIIVEIKKHihgeiNKDLNKILEDFKNKEKELSNkindyakEKDELNKYKSKISEIKNHYNDQINIDNIKDED 808
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1043 VKKNKQENDKLKKEIfTLQKDLRDKTV------------LIEKSHEMERALSRKTDELNKQLKDLSQKY-TEVKNVKEKL 1109
Cdd:TIGR01612 809 AKQNYDKSKEYIKTI-SIKEDEIFKIInemkfmkddflnKVDKFINFENNCKEKIDSEHEQFAELTNKIkAEISDDKLND 887
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1110 VEENAKQT-SEILAVQNLLQKQHvplEQVEALKKsLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSV---- 1184
Cdd:TIGR01612 888 YEKKFNDSkSLINEINKSIEEEY---QNINTLKK-VDEYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESNLieks 963
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1185 --PLAEHLQIKEAFEKEVGIIKASLREKEEESQNKMEEVSKLQSEVQNTKQALKKLETREvvdlsKYKATkSDLETQISS 1262
Cdd:TIGR01612 964 ykDKFDNTLIDKINELDKAFKDASLNDYEAKNNELIKYFNDLKANLGKNKENMLYHQFDE-----KEKAT-NDIEQKIED 1037
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1263 LNEKLANLnrkyeevcEEVLHAKKKEISAKDEKELLHfSIEQEIKDQKERCDKSLTTITELQRRIQ-----ESAKQIEAK 1337
Cdd:TIGR01612 1038 ANKNIPNI--------EIAIHTSIYNIIDEIEKEIGK-NIELLNKEILEEAEINITNFNEIKEKLKhynfdDFGKEENIK 1108
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1034591230 1338 -DNKITELLNDVERLKQALN-GLSQLTYTSgnptKRQSQLIDTLQHQVKSLEQ 1388
Cdd:TIGR01612 1109 yADEINKIKDDIKNLDQKIDhHIKALEEIK----KKSENYIDEIKAQINDLED 1157
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
927-1394 |
3.85e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.81 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 927 LKRNLENTQNQIKAEYISLAEHEAKMSSLsqsMRKVQDSNAEILANYRKGQEEIVTLHaEIKAQKKELDTIQECIKVKYA 1006
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSIT---LKEIERLSIEYNNAMDDYNNLKSALN-ELSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1007 PIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALS---- 1082
Cdd:PRK01156 264 DLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNdyik 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1083 --RKTDELNKQLKDLSQ---KYT----EVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKE 1153
Cdd:PRK01156 344 kkSRYDDLNNQILELEGyemDYNsylkSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISS 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1154 ELKSMQ---RCYEKEQQTVTKLHQLLENQKNSSVpLAEHLqikeAFEKEVGIIKASLREKE--EESQNKME-EVSKLQSE 1227
Cdd:PRK01156 424 KVSSLNqriRALRENLDELSRNMEMLNGQSVCPV-CGTTL----GEEKSNHIINHYNEKKSrlEEKIREIEiEVKDIDEK 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1228 VQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANL---NRKYEEVCEEVLHAKKKEISAKDEKELLHFS--- 1301
Cdd:PRK01156 499 IVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELkdkHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAvis 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1302 -------------IEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVERLKQALNGLSQLTytsgNP 1368
Cdd:PRK01156 579 lidietnrsrsneIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKI----DN 654
|
490 500
....*....|....*....|....*.
gi 1034591230 1369 TKRQSQLIDTLQHQVKSLEQQLADAD 1394
Cdd:PRK01156 655 YKKQIAEIDSIIPDLKEITSRINDIE 680
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
513-1109 |
4.38e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.70 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 513 KQLEDALKDVQKRMYESEGKV-------KQMQTHFLALKEHLTSEAASGNHRLTEE--LKDQLKDLKVKYEGASAEVGKL 583
Cdd:pfam01576 71 QELEEILHELESRLEEEEERSqqlqnekKKMQQHIQDLEEQLDEEEAARQKLQLEKvtTEAKIKKLEEDILLLEDQNSKL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 584 RNQIKQNEMIVEEFKRDEGKLIEENKRLQK-----ELSMCEME----REKKGRKVTE-----MEGQAKELSAKLA----- 644
Cdd:pfam01576 151 SKERKLLEERISEFTSNLAEEEEKAKSLSKlknkhEAMISDLEerlkKEEKGRQELEkakrkLEGESTDLQEQIAelqaq 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 645 ----LSIPAEKFENMKSSLSNEVNEKAKK--LVEMEREHEKSLSEI------------------RQLKRELENVKAKLAQ 700
Cdd:pfam01576 231 iaelRAQLAKKEEELQAALARLEEETAQKnnALKKIRELEAQISELqedleseraarnkaekqrRDLGEELEALKTELED 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 701 HVKPEEHEQ-VKSRLEQKSGELGKKITELT--------------------LKNQTLQKEIEKVYLDN--KLLKEQAHNLT 757
Cdd:pfam01576 311 TLDTTAAQQeLRSKREQEVTELKKALEEETrsheaqlqemrqkhtqaleeLTEQLEQAKRNKANLEKakQALESENAELQ 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 758 IEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVppeKHEKEIIALK 837
Cdd:pfam01576 391 AELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNI---KLSKDVSSLE 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 838 SNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQyvpvkthEEVKMTLNDTLAKTNRELLDVKKKFEDINQEF 917
Cdd:pfam01576 468 SQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEE-------EEAKRNVERQLSTLQAQLSDMKKKLEEDAGTL 540
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 918 VKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKV---QDSNAEILANYRKGQEEIVTLHAEIKAqkkel 994
Cdd:pfam01576 541 EALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLlvdLDHQRQLVSNLEKKQKKFDQMLAEEKA----- 615
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 995 dtiqecIKVKYApivsfEECER-KFKATEKELKD-QLSEQTQKYSVSEEEVKKNkqeNDKLKKEIFTL--QKDLRDKTVl 1070
Cdd:pfam01576 616 ------ISARYA-----EERDRaEAEAREKETRAlSLARALEEALEAKEELERT---NKQLRAEMEDLvsSKDDVGKNV- 680
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1034591230 1071 ieksHEME---RALSRKTDELNKQLKDLSQKYTEVKNVKEKL 1109
Cdd:pfam01576 681 ----HELErskRALEQQVEEMKTQLEELEDELQATEDAKLRL 718
|
|
| trp |
TIGR00870 |
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ... |
50-285 |
4.62e-03 |
|
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273311 [Multi-domain] Cd Length: 743 Bit Score: 41.61 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 50 DWNKYDDRLMKAAERGDVekvtSILAKKGVNPGKLDVE-----GRSVFHVVTSKGNLECLNAILI-HGVDITTSDTAgrn 123
Cdd:TIGR00870 13 PLSDEEKAFLPAAERGDL----ASVYRDLEEPKKLNINcpdrlGRSALFVAAIENENLELTELLLnLSCRGAVGDTL--- 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 124 aLHLAAKyghalclqkllqyncptEHADLQGRTALHDAAMADCPSSIQLlcdhgasVNAKDVD----GRTPLVLATQMSR 199
Cdd:TIGR00870 86 -LHAISL-----------------EYVDAVEAILLHLLAAFRKSGPLEL-------ANDQYTSeftpGITALHLAAHRQN 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 200 PTICQLLIDRGADVNSR-------DKQNRTALMLGcEY--------GCRDAVEVLIKNGADISLLDALGHdssyyarigd 264
Cdd:TIGR00870 141 YEIVKLLLERGASVPARacgdffvKSQGVDSFYHG-ESplnaaaclGSPSIVALLSEDPADILTADSLGN---------- 209
|
250 260
....*....|....*....|.
gi 1034591230 265 nlDILTLLKTASENTNKGREL 285
Cdd:TIGR00870 210 --TLLHLLVMENEFKAEYEEL 228
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
310-741 |
4.75e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 310 QREHQNIQDLEIENEDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRTIEAL 389
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 390 KNrfkyfESDHLGSGSHFSNRKEDMLLKQGQMYMADSQctSPGIPAHMQSRSMLRPLELSLPSQTSYSENEILKKELEAM 469
Cdd:COG1196 476 EA-----ALAELLEELAEAAARLLLLLEAEADYEGFLE--GVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAL 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 470 RTFCESAKQDRLKLQNEL-AHKVAECKALALECERVKEDSDEQIKQLED----ALKDVQKRMYESEGKVKQMQTHFLALK 544
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLkAAKAGRATFLPLDKIRARAALAAALARGAIgaavDLVASDLREADARYYVLGDTLLGRTLV 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 545 EHLTSEAASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREK 624
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 625 KGRKVTEMEGQAKELSAKL-ALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELE-----NVKAkl 698
Cdd:COG1196 709 LAEAEEERLEEELEEEALEeQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEalgpvNLLA-- 786
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1034591230 699 aqhvkPEEHEQVKSRLEqksgelgkkitELTLKNQTLQKEIEK 741
Cdd:COG1196 787 -----IEEYEELEERYD-----------FLSEQREDLEEARET 813
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
486-864 |
5.25e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.18 E-value: 5.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 486 ELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLtseaasgnhrltEELKDQ 565
Cdd:PRK02224 255 TLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR------------EELEDR 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 566 LKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLAL 645
Cdd:PRK02224 323 DEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGD 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 646 SipAEKFENMkSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKA-----KLAQHVKPEEHEQVKSRLEQKSGE 720
Cdd:PRK02224 403 A--PVDLGNA-EDFLEELREERDELREREAELEATLRTARERVEEAEALLEagkcpECGQPVEGSPHVETIEEDRERVEE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 721 LGKKITELTLKNQTLQKEIEKVyldnkllkeqahnltiemknhyvplkvsEDMKKSHDAiIDDLNRKLLDVTQKYTEKKL 800
Cdd:PRK02224 480 LEAELEDLEEEVEEVEERLERA----------------------------EDLVEAEDR-IERLEERREDLEELIAERRE 530
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 801 EMEKLLLENDSLSKDVSRLETvfvPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHAL 864
Cdd:PRK02224 531 TIEEKRERAEELRERAAELEA---EAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL 591
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1021-1434 |
5.51e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.44 E-value: 5.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1021 TEKELKDQLseqtqkysvseEEVKKNKQENDKLKkeifTLQKDLRDKTVLIEKSHEMERalsrKTDELNKQLKDLSQKYT 1100
Cdd:PRK11281 37 TEADVQAQL-----------DALNKQKLLEAEDK----LVQQDLEQTLALLDKIDRQKE----ETEQLKQQLAQAPAKLR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1101 EVKNVKEKLVEENAKQTSEILAVQNL--LQKQhvpLEQVEALKKSLNGTIENLKEELKSMQRCYEKEQQTVT-------K 1171
Cdd:PRK11281 98 QAQAELEALKDDNDEETRETLSTLSLrqLESR---LAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYansqrlqQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1172 LHQLLENQKNSSVPLAEHLQIKEAFEKevgiikASLREKEEESQNKMEEVSKLQsevqntkqalkkletrevvDLskYKA 1251
Cdd:PRK11281 175 IRNLLKGGKVGGKALRPSQRVLLQAEQ------ALLNAQNDLQRKSLEGNTQLQ-------------------DL--LQK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1252 TKSDLETQISSLNEKLANLnrkyeevcEEVLHAKKKEISAKDEKEllhfsieQEIKDQKERCDKSLTTITELQRRIQESA 1331
Cdd:PRK11281 228 QRDYLTARIQRLEHQLQLL--------QEAINSKRLTLSEKTVQE-------AQSQDEAARIQANPLVAQELEINLQLSQ 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1332 KQIEAKDnKITELLNDVERLKQALNGLSQltytsgnpTKR---------------------QSQLIDTLQhQVKSLEQQL 1390
Cdd:PRK11281 293 RLLKATE-KLNTLTQQNLRVKNWLDRLTQ--------SERnikeqisvlkgslllsrilyqQQQALPSAD-LIEGLADRI 362
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1034591230 1391 ADAdRQHQ-EV---------IAIYRTHLLSAAQGHMDEDVQEALLQIIQMRQGL 1434
Cdd:PRK11281 363 ADL-RLEQfEInqqrdalfqPDAYIDKLEAGHKSEVTDEVRDALLQLLDERREL 415
|
|
| PHA02798 |
PHA02798 |
ankyrin-like protein; Provisional |
70-281 |
5.89e-03 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222931 [Multi-domain] Cd Length: 489 Bit Score: 40.97 E-value: 5.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 70 VTSILAKKGVNPGKLDVEGRSVFHVVTSKG---NLECLNAILIHGVDITTSDTAGRNALHLAAKYGHA-------LCLQK 139
Cdd:PHA02798 91 IVKILIENGADINKKNSDGETPLYCLLSNGyinNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHidieiikLLLEK 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 140 LLQYNcptEHADLQGRTALH-------DAAMADCpssIQLLCDHGASVNAKDVDGRTPLVlatqmsrPTICQLLIDRGA- 211
Cdd:PHA02798 171 GVDIN---THNNKEKYDTLHcyfkyniDRIDADI---LKLFVDNGFIINKENKSHKKKFM-------EYLNSLLYDNKRf 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 212 ------------DVNSRDKQNRTALMLGCEYGCRDAVEVLIKNGADISLLDALGHdssyyarigdnldilTLLKTASENT 279
Cdd:PHA02798 238 kknildfifsyiDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGN---------------TCLFTAFENE 302
|
..
gi 1034591230 280 NK 281
Cdd:PHA02798 303 SK 304
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
474-721 |
5.99e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 5.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 474 ESAKQDRLKLQNELAHKVAECKALALECERVK---EDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLtse 550
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLkqlAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL--- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 551 aasgnHRLTEELKDQLKDLkVKYEGASAEVGKLR----NQIKQNEMIVEEFKRDEGKLIEENKRLQKELSmcemerekkg 626
Cdd:COG4942 100 -----EAQKEELAELLRAL-YRLGRQPPLALLLSpedfLDAVRRLQYLKYLAPARREQAEELRADLAELA---------- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 627 RKVTEMEGQAKELSAKLAlsipaeKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRE---LENVKAKLAQHVK 703
Cdd:COG4942 164 ALRAELEAERAELEALLA------ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEaeeLEALIARLEAEAA 237
|
250
....*....|....*...
gi 1034591230 704 PEEHEQVKSRLEQKSGEL 721
Cdd:COG4942 238 AAAERTPAAGFAALKGKL 255
|
|
| TRPV3 |
cd22194 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ... |
39-224 |
6.06e-03 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.
Pssm-ID: 411978 [Multi-domain] Cd Length: 680 Bit Score: 40.90 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 39 ECNWK-ISDHAADWNKYD--DRLMKAAErGDVEKVTSILAKKGV--NPGKLDVEGRSVFHVVTSKGNLE-CLNAILIHGV 112
Cdd:cd22194 28 PSNPNsPSAELAKEEQRDkkKRLKKVSE-AAVEELGELLKELKDlsRRRRKTDVPDFLMHKLTASDTGKtCLMKALLNIN 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 113 DITTSDTagRNALHLAAKYGhalCLQKLLqyNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNA---------K 183
Cdd:cd22194 107 ENTKEIV--RILLAFAEENG---ILDRFI--NAEYTEEAYEGQTALNIAIERRQGDIVKLLIAKGADVNAhakgvffnpK 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1034591230 184 DVD-----GRTPLVLATQMSRPTICQLLIDRGAD-VNSRDKQNRTAL 224
Cdd:cd22194 180 YKHegfyfGETPLALAACTNQPEIVQLLMEKESTdITSQDSRGNTVL 226
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
786-1116 |
6.31e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.10 E-value: 6.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 786 RKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLET-----VFVPPEKHEKEIIALKSNIVELKKQLSELK-KKCGEDQE 859
Cdd:COG5185 196 KKAEPSGTVNSIKESETGNLGSESTLLEKAKEIINIeealkGFQDPESELEDLAQTSDKLEKLVEQNTDLRlEKLGENAE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 860 KIHALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNR-ELLDVKKKFEDINQEFVKikdKNEILKRNLENTQNQI 938
Cdd:COG5185 276 SSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEEQlAAAEAEQELEESKRETET---GIQNLTAEIEQGQESL 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 939 KAEYISLaeheakmsslsqsmrKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKF 1018
Cdd:COG5185 353 TENLEAI---------------KEEIENIVGEVELSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKA 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1019 KATE-KELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIftlqkDLRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQ 1097
Cdd:COG5185 418 ADRQiEELQRQIEQATSSNEEVSKLLNELISELNKVMREA-----DEESQSRLEEAYDEINRSVRSKKEDLNEELTQIES 492
|
330
....*....|....*....
gi 1034591230 1098 KYTEVKNVKEKLVEENAKQ 1116
Cdd:COG5185 493 RVSTLKATLEKLRAKLERQ 511
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
306-843 |
6.95e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.08 E-value: 6.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 306 VKSHQREHQNIQDLEIENEDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEESLRT 385
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAE 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 386 IEALKNRFKYFESDHLgsgsHFSNRKEDMLLKQGQMYMADSQctspgipaHMQSRSMLRplelslpsqtsySENEILKKE 465
Cdd:COG1196 374 LAEAEEELEELAEELL----EALRAAAELAAQLEELEEAEEA--------LLERLERLE------------EELEELEEA 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 466 LEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKE 545
Cdd:COG1196 430 LAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 546 HLTSEAASGNHRLTEELKDQLKDLKVKYEGASAEVGKLRNQikqnemIVEEFKRDEGKLIEENKrlqkelsmcemeREKK 625
Cdd:COG1196 510 VKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQN------IVVEDDEVAAAAIEYLK------------AAKA 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 626 GRKVTEMEGQAKELSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPE 705
Cdd:COG1196 572 GRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTL 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 706 EHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEmknhyvplkvSEDMKKSHDAIIDDLN 785
Cdd:COG1196 652 EGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE----------ERELAEAEEERLEEEL 721
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1034591230 786 RKLLDVTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVEL 843
Cdd:COG1196 722 EEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
771-1061 |
7.36e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 40.78 E-value: 7.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 771 EDMKKSHDAIIDDLNRKLLDVTQKYTEKKLEMEKLlleNDSLSKDVSRLETVfvppekhEKEIIALKSNiVELKKQLSEL 850
Cdd:pfam05667 327 EELQQQREEELEELQEQLEDLESSIQELEKEIKKL---ESSIKQVEEELEEL-------KEQNEELEKQ-YKVKKKTLDL 395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 851 KKKCGEDQEKIHALTSENTNLKKMMSNQY----VP-VKTHEEVKmtlndtLAKTNRELlDVKKKFEDINQEFVKIKDKNE 925
Cdd:pfam05667 396 LPDAEENIAKLQALVDASAQRLVELAGQWekhrVPlIEEYRALK------EAKSNKED-ESQRKLEEIKELREKIKEVAE 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 926 ILKRNlENTQNQIKAEYISLAeheaKMSSLSQSMRKVqdsnAEILANYRKGQEEIVTLHAEIKAQKKELDTIQECIkvky 1005
Cdd:pfam05667 469 EAKQK-EELYKQLVAEYERLP----KDVSRSAYTRRI----LEIVKNIKKQKEEITKILSDTKSLQKEINSLTGKL---- 535
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034591230 1006 apivsfeecERKFKATEKEL-----KDQLSEQTQKYSVSE----EEVKKNKQENDKLKKEIFTLQ 1061
Cdd:pfam05667 536 ---------DRTFTVTDELVfkdakKDESVRKAYKYLAALhencEQLIQTVEETGTIMREIRDLE 591
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
820-1220 |
7.74e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 40.61 E-value: 7.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 820 ETVFVPPEK--HEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNlkKMMSnqyvpvKTHEEVKMTLNDTLa 897
Cdd:PLN03229 409 EGVPVDPERkvNMKKREAVKTPVRELEGEVEKLKEQILKAKESSSKPSELALN--EMIE------KLKKEIDLEYTEAV- 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 898 ktnrELLDVKKKFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQ 977
Cdd:PLN03229 480 ----IAMGLQERLENLREEFSKANSQDQLMHPVLMEKIEKLKDEFNKRLSRAPNYLSLKYKLDMLNEFSRAKALSEKKSK 555
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 978 EEivTLHAEIKAQKKELDTIQEcikvkyapivsfeecerkFKATEKELKDQlseqtqkysVSEEEVKKNKQENDKLKKEI 1057
Cdd:PLN03229 556 AE--KLKAEINKKFKEVMDRPE------------------IKEKMEALKAE---------VASSGASSGDELDDDLKEKV 606
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1058 FTLQKDLRDKTVLIEKSHEMERALSRKTDelnkqlKDLSQKyTEVKNVKEKLVEENAKQTSEILAVQNLlqkqhvpleqv 1137
Cdd:PLN03229 607 EKMKKEIELELAGVLKSMGLEVIGVTKKN------KDTAEQ-TPPPNLQEKIESLNEEINKKIERVIRS----------- 668
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1138 ealkKSLNGTIENLKEEL-KSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVgiikASLREKEEESQN 1216
Cdd:PLN03229 669 ----SDLKSKIELLKLEVaKASKTPDVTEKEKIEALEQQIKQKIAEALNSSELKEKFEELEAEL----AAARETAAESNG 740
|
....
gi 1034591230 1217 KMEE 1220
Cdd:PLN03229 741 SLKN 744
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
662-1344 |
7.77e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.19 E-value: 7.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 662 EVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHvkpeeheqvksrlEQKSGELGKKITELTlkNQTLQKEIEK 741
Cdd:TIGR01612 531 DQNIKAKLYKEIEAGLKESYELAKNWKKLIHEIKKELEEE-------------NEDSIHLEKEIKDLF--DKYLEIDDEI 595
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 742 VYLdNKL---LKEQAHNltIEMKNHYVplKVSEDMKK---SHDAIIDDLNR--------KLLDVTQKYTEKKLEMEKLLl 807
Cdd:TIGR01612 596 IYI-NKLkleLKEKIKN--ISDKNEYI--KKAIDLKKiieNNNAYIDELAKispyqvpeHLKNKDKIYSTIKSELSKIY- 669
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 808 eNDSLSKDVSRLETVFvppekHEKEIialksNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKkmmsnqyvpVKTHEE 887
Cdd:TIGR01612 670 -EDDIDALYNELSSIV-----KENAI-----DNTEDKAKLDDLKSKIDKEYDKIQNMETATVELH---------LSNIEN 729
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 888 VKMTLNDTLAKTNRELldvkkkFEDINQEFVKIKDKNEILKRNLENTQNQIKAEYISLAEHEAKMSSLSQ------SMRK 961
Cdd:TIGR01612 730 KKNELLDIIVEIKKHI------HGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNhyndqiNIDN 803
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 962 VQDSNAEilANYRKGQEEIVTLHA---EIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKElkdQLSEQTQKYsv 1038
Cdd:TIGR01612 804 IKDEDAK--QNYDKSKEYIKTISIkedEIFKIINEMKFMKDDFLNKVDKFINFENNCKEKIDSEHE---QFAELTNKI-- 876
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1039 seeevkKNKQENDKLKkeifTLQKDLRDKTVLIekshemeralsrktDELNKQLKDLSQKYTEVKNVKEKL-VEENAKQT 1117
Cdd:TIGR01612 877 ------KAEISDDKLN----DYEKKFNDSKSLI--------------NEINKSIEEEYQNINTLKKVDEYIkICENTKES 932
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1118 seilaVQNLLQKQHVpleqveaLKKSLNGTIENLKEElKSMQRCYEK--EQQTVTKLHQLLENQKNSSvpLAEHLQIKEA 1195
Cdd:TIGR01612 933 -----IEKFHNKQNI-------LKEILNKNIDTIKES-NLIEKSYKDkfDNTLIDKINELDKAFKDAS--LNDYEAKNNE 997
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1196 FEKEVGIIKASL-REKEEESQNKMEEVSKLQSEV-QNTKQALKKLETREVVDLSKYKATKSDLETQI----SSLNEKL-- 1267
Cdd:TIGR01612 998 LIKYFNDLKANLgKNKENMLYHQFDEKEKATNDIeQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIgkniELLNKEIle 1077
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1268 -ANLN-RKYEEVCEEVLH------AKKKEISAKDEKEllhfSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDN 1339
Cdd:TIGR01612 1078 eAEINiTNFNEIKEKLKHynfddfGKEENIKYADEIN----KIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQIN 1153
|
....*
gi 1034591230 1340 KITEL 1344
Cdd:TIGR01612 1154 DLEDV 1158
|
|
| Ank_3 |
pfam13606 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
186-214 |
8.52e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.
Pssm-ID: 463933 [Multi-domain] Cd Length: 30 Bit Score: 35.31 E-value: 8.52e-03
10 20
....*....|....*....|....*....
gi 1034591230 186 DGRTPLVLATQMSRPTICQLLIDRGADVN 214
Cdd:pfam13606 1 DGNTPLHLAARNGRLEIVKLLLENGADIN 29
|
|
| Gp58 |
pfam07902 |
gp58-like protein; Sequences found in this family are derived from a number of bacteriophage ... |
1067-1383 |
8.59e-03 |
|
gp58-like protein; Sequences found in this family are derived from a number of bacteriophage and prophage proteins. They are similar to gp58, a minor structural protein of Lactococcus delbrueckii bacteriophage LL-H.
Pssm-ID: 369586 [Multi-domain] Cd Length: 594 Bit Score: 40.71 E-value: 8.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1067 KTVLIEKSHE-------MERALSrKTDELNKQLKDL--SQKYTEVK-NVKEKLVE-ENAKQTSEILAVQNLLQKQHVplE 1135
Cdd:pfam07902 63 APVVVEGSGEstglfksLEEMLS-QLKELNLELTDTknSNLWSKIKlNNNGMLREyHNDTIKTEIVESAEGIATRIS--E 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1136 QVEALKKSLNGTIENLKEELKSMQR-CYEKEQQTVTKLHQLLENQKNSsvplaehlqikeafekevgiikaslrekeees 1214
Cdd:pfam07902 140 DTDKKLALINETISGIRREYQDADRqLSSSYQAGIEGLKATMASDKIG-------------------------------- 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1215 qnkmeevskLQSEVQNTKQALKKLETREVVDLS-KYKATKSDletQISSLNEKLANLNRKYEEVCEEVLHAKKKEISA-K 1292
Cdd:pfam07902 188 ---------LQAEIQASAQGLSQRYDNEIRKLSaKITTTSSG---TTEAYESKLDDLRAEFTRSNQGMRTELESKISGlQ 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1293 DEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAkdnkitellndverLKQALNGL-SQLTYTSGNPTKR 1371
Cdd:pfam07902 256 STQQSTAYQISQEISNREGAVSRVQQDLDSYQRRLQDAEKNYSS--------------LTQTVKGLqSTVSDPNSKLESR 321
|
330
....*....|..
gi 1034591230 1372 QSQLIDTLQHQV 1383
Cdd:pfam07902 322 ITQLAGLIEQKV 333
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
827-1108 |
8.65e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 39.89 E-value: 8.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 827 EKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKIHALTSENTNLKKMMSNQYVPVKTHEEVKmtlNDTLAKTNRELLDV 906
Cdd:COG1340 18 EELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKELKEER---DELNEKLNELREEL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 907 KKKFEDINQEFVKIKDKNEILKRnLENTQNQIKAEYISLAEHE---AKMSSLSQSMRKVQDSNaeilanyrKGQEEIVTL 983
Cdd:COG1340 95 DELRKELAELNKAGGSIDKLRKE-IERLEWRQQTEVLSPEEEKelvEKIKELEKELEKAKKAL--------EKNEKLKEL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 984 HAEIKAQKKELDTIQECIKvkyapivsfeecerkfkatekelkdQLSEQTQKYSvseEEVKKNKQENDKLKKEIFTLQKD 1063
Cdd:COG1340 166 RAELKELRKEAEEIHKKIK-------------------------ELAEEAQELH---EEMIELYKEADELRKEADELHKE 217
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1034591230 1064 LRDKTVLIEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEK 1108
Cdd:COG1340 218 IVEAQEKADELHEEIIELQKELRELRKELKKLRKKQRALKREKEK 262
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
682-1240 |
9.07e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 40.49 E-value: 9.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 682 SEIRQLKRELENVKAKLAQhvKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKEIEKVyldNKLLKEQAHNLTIEMK 761
Cdd:pfam05557 2 AELIESKARLSQLQNEKKQ--MELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLL---EKREAEAEEALREQAE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 762 NHYVPLKVSEDMKKshdaiiddlnrklldvtqKYTEKKLEMEKLLLENDSLSKDVSRLETVFvppEKHEKEIIALKSNIV 841
Cdd:pfam05557 77 LNRLKKKYLEALNK------------------KLNEKESQLADAREVISCLKNELSELRRQI---QRAELELQSTNSELE 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 842 ELKKQLSELKKKCGEDQEKIHALTSENTNLKkmmsnqyvpvkTHEEVKMTLNDTLAKTNRELLDVKkkfeDINQEFVKIK 921
Cdd:pfam05557 136 ELQERLDLLKAKASEAEQLRQNLEKQQSSLA-----------EAEQRIKELEFEIQSQEQDSEIVK----NSKSELARIP 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 922 DKNEILKRnlentqnqikaeyisLAEHEAKMSSLSQSMRKVQDSNAEI---LANYRKGQEEIVTLHAEIKAQKKELDTIQ 998
Cdd:pfam05557 201 ELEKELER---------------LREHNKHLNENIENKLLLKEEVEDLkrkLEREEKYREEAATLELEKEKLEQELQSWV 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 999 ECIKVKYAPIVSFEECERKFKA---TEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSH 1075
Cdd:pfam05557 266 KLAQDTGLNLRSPEDLSRRIEQlqqREIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQ 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1076 EMERALSRKTDELNKQLKDLSQKYTEvKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKEEL 1155
Cdd:pfam05557 346 RRVLLLTKERDGYRAILESYDKELTM-SNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLEREL 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034591230 1156 KSMQRCYE---------------KEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFE-KEVGIIKASLREKEEESQNKME 1219
Cdd:pfam05557 425 QALRQQESladpsyskeevdslrRKLETLELERQRLREQKNELEMELERRCLQGDYDpKKTKVLHLSMNPAAEAYQQRKN 504
|
570 580
....*....|....*....|.
gi 1034591230 1220 EVSKLQSEVQNTKQALKKLET 1240
Cdd:pfam05557 505 QLEKLQAEIERLKRLLKKLED 525
|
|
|