|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
636-779 |
2.66e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 147.47 E-value: 2.66e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 636 QFHAFISYSGHDsfWVKNELLPNLEK--EGMQICLHERNFVPGKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYELYF 713
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHLLEklRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1800033781 714 AHHNLFHEGSNNLILILLEPIPQYsIPSSYHKLKSLMaRRTYLEWPKEKSKRglFWANLRAAINIK 779
Cdd:smart00255 79 ALENALEEGGLRVIPIFYEVIPSD-VRKQPGKFRKVF-KKNYLKWPEDEKEQ--FWKKALYAVPSK 140
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
637-782 |
3.71e-25 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 102.44 E-value: 3.71e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 637 FHAFISYSGHDSF-WVKNELLPNLEKEGMQICLHERNFVPGKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYELYFAH 715
Cdd:pfam01582 1 YDVFLSFRGSDTReWFVSHLLKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 716 HNLFhEGSNNLILILLEPIPQY------SIPSSYHKLKSLMARRTYLEWP------------KEKSKRGLFWANLRAAIN 777
Cdd:pfam01582 81 ECAL-DLGQKVIPIFYEVDPSDvrkqtgSFGKAFKKHKKVLTEEKVLKWRgalnevaniwhsKSVSDESKFWKKIAYDIS 159
|
....*
gi 1800033781 778 IKLTG 782
Cdd:pfam01582 160 NKLNG 164
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
353-526 |
7.27e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 77.67 E-value: 7.27e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 353 LDFSNNLLTDtVFENCGHLTELETLILQMNQLKELSkiaEMTTQMKSLQQLDISQNSVSY-DEKKGDCswtKSLLSLNMS 431
Cdd:COG4886 118 LDLSGNQLTD-LPEELANLTNLKELDLSNNQLTDLP---EPLGNLTNLKSLDLSNNQLTDlPEELGNL---TNLKELDLS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 432 SNVLTD---TIFRClpPRIKVLDLHSNKIKSIPKQVVKLEALQELNVAFNSLTDLPGCGSFSGLSVLIIDHNSVSHPSad 508
Cdd:COG4886 191 NNQITDlpePLGNL--TNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLTDLP-- 266
|
170
....*....|....*...
gi 1800033781 509 FFQSCQKMRSIKAGNNPF 526
Cdd:COG4886 267 PLANLTNLKTLDLSNNQL 284
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
29-152 |
1.47e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 67.27 E-value: 1.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 29 VDRSKNGLIYVPKDLSQKT--TILNISQNYISELqTSDILSLSKLRILIISHNRIQYLDMSVFKFNQeLEYLDLSHNKLA 106
Cdd:COG4886 118 LDLSGNQLTDLPEELANLTnlKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEELGNLTN-LKELDLSNNQIT 195
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1800033781 107 KISCHPT--VNLKHLDLSFNAFDALPicKEFGNMSQLKFLGLSTTHLE 152
Cdd:COG4886 196 DLPEPLGnlTNLEELDLSGNQLTDLP--EPLANLTNLETLDLSNNQLT 241
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
352-560 |
3.29e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 63.71 E-value: 3.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 352 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKelSKIAEMTTQMKSLQQLDISQNSVSyDEKKGDCSWTKSLLSLNMS 431
Cdd:PLN00113 240 HLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLS--GPIPPSIFSLQKLISLDLSDNSLS-GEIPELVIQLQNLEILHLF 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 432 SNVLTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAFNSLT-DLPGCGSFSG-LSVLIIDHNSVSHPS 506
Cdd:PLN00113 317 SNNFTGKIPVALTslPRLQVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCSSGnLFKLILFSNSLEGEI 396
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1800033781 507 ADFFQSCQKMRSIKAGNNPFqcTCEL-REFVK----NIDQVSSEVVEGWPDSYKCDYPE 560
Cdd:PLN00113 397 PKSLGACRSLRRVRLQDNSF--SGELpSEFTKlplvYFLDISNNNLQGRINSRKWDMPS 453
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
524-577 |
8.69e-09 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 52.05 E-value: 8.69e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1800033781 524 NPFQCTCELREFVKNIDQvssEVVEGWPDSYKCDYPESYRGtLLKDFHMSELSC 577
Cdd:smart00082 1 NPFICDCELRWLLRWLQA---NEHLQDPVDLRCASPSSLRG-PLLELLHSEFKC 50
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
69-126 |
6.38e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.83 E-value: 6.38e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1800033781 69 SKLRILIISHNRIQYLDMSVFKFNQELEYLDLSHNKLAKIS---CHPTVNLKHLDLSFNAF 126
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSpgaFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
353-474 |
7.88e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 48.51 E-value: 7.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 353 LDFSNNLLTD----TVFENCGHLTELETLILQMNQL--KELSKIAEMTTQMKSLQQLDISQNSVS----YDEKKGDCSWT 422
Cdd:cd00116 170 LNLANNGIGDagirALAEGLKANCNLEVLDLNNNGLtdEGASALAETLASLKSLEVLNLGDNNLTdagaAALASALLSPN 249
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1800033781 423 KSLLSLNMSSNVLTDTIFRCL------PPRIKVLDLHSNKIKSIPKQVVKLEALQELN 474
Cdd:cd00116 250 ISLLTLSLSCNDITDDGAKDLaevlaeKESLLELDLRGNKFGEEGAQLLAESLLEPGN 307
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
33-130 |
1.22e-04 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 45.46 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 33 KNGLIYVPKDLSQKTTILNISQNYISELQTSdilSLSKLRILIISHNRIQYLDMSVfkfNQELEYLDLSHNKLAKISCHP 112
Cdd:PRK15370 229 SNQLTSIPATLPDTIQEMELSINRITELPER---LPSALQSLDLFHNKISCLPENL---PEELRYLSVYDNSIRTLPAHL 302
|
90
....*....|....*...
gi 1800033781 113 TVNLKHLDLSFNAFDALP 130
Cdd:PRK15370 303 PSGITHLNVQSNSLTALP 320
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
43-109 |
9.39e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 41.31 E-value: 9.39e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 43 LSQKTTILNISQNYISELqtSDILSLSKLRILIISHNRIQYLD---MSVFKFNQeLEYLDLSHNKLAKIS 109
Cdd:cd21340 118 LSNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEellDLLSSWPS-LRELDLTGNPVCKKP 184
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
445-500 |
9.90e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.89 E-value: 9.90e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 445 PRIKVLDLHSNKIKSIPKQV-VKLEALQELNVAFNSLTDLPGcGSFSGLS---VLIIDHN 500
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLSP-GAFSGLPslrYLDLSGN 59
|
|
| LRRCT |
pfam01463 |
Leucine rich repeat C-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
553-577 |
1.47e-03 |
|
Leucine rich repeat C-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the C-terminus of tandem leucine rich repeats.
Pssm-ID: 279765 Cd Length: 26 Bit Score: 36.65 E-value: 1.47e-03
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
636-779 |
2.66e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 147.47 E-value: 2.66e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 636 QFHAFISYSGHDsfWVKNELLPNLEK--EGMQICLHERNFVPGKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYELYF 713
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHLLEklRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1800033781 714 AHHNLFHEGSNNLILILLEPIPQYsIPSSYHKLKSLMaRRTYLEWPKEKSKRglFWANLRAAINIK 779
Cdd:smart00255 79 ALENALEEGGLRVIPIFYEVIPSD-VRKQPGKFRKVF-KKNYLKWPEDEKEQ--FWKKALYAVPSK 140
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
637-782 |
3.71e-25 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 102.44 E-value: 3.71e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 637 FHAFISYSGHDSF-WVKNELLPNLEKEGMQICLHERNFVPGKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYELYFAH 715
Cdd:pfam01582 1 YDVFLSFRGSDTReWFVSHLLKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 716 HNLFhEGSNNLILILLEPIPQY------SIPSSYHKLKSLMARRTYLEWP------------KEKSKRGLFWANLRAAIN 777
Cdd:pfam01582 81 ECAL-DLGQKVIPIFYEVDPSDvrkqtgSFGKAFKKHKKVLTEEKVLKWRgalnevaniwhsKSVSDESKFWKKIAYDIS 159
|
....*
gi 1800033781 778 IKLTG 782
Cdd:pfam01582 160 NKLNG 164
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
640-733 |
1.65e-16 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 76.20 E-value: 1.65e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 640 FISYSGHDSFWVKnELLPNLEKEGMQICLHERNFVPGKSIVENIINCIEKSYKSIFVLSPNFVQSEWCHYELYFAHHnlF 719
Cdd:pfam13676 2 FISYAGEDRAWAE-WLADALEAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALA--D 78
|
90
....*....|....
gi 1800033781 720 HEGSNNLILILLEP 733
Cdd:pfam13676 79 PEGRKRLIPVRLEC 92
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
353-526 |
7.27e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 77.67 E-value: 7.27e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 353 LDFSNNLLTDtVFENCGHLTELETLILQMNQLKELSkiaEMTTQMKSLQQLDISQNSVSY-DEKKGDCswtKSLLSLNMS 431
Cdd:COG4886 118 LDLSGNQLTD-LPEELANLTNLKELDLSNNQLTDLP---EPLGNLTNLKSLDLSNNQLTDlPEELGNL---TNLKELDLS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 432 SNVLTD---TIFRClpPRIKVLDLHSNKIKSIPKQVVKLEALQELNVAFNSLTDLPGCGSFSGLSVLIIDHNSVSHPSad 508
Cdd:COG4886 191 NNQITDlpePLGNL--TNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLTDLP-- 266
|
170
....*....|....*...
gi 1800033781 509 FFQSCQKMRSIKAGNNPF 526
Cdd:COG4886 267 PLANLTNLKTLDLSNNQL 284
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
235-541 |
1.73e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 1.73e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 235 NILAKLQTNPKLSSLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGRLDFRDFNYSGTSLKALSIHQVVSdVFNF 314
Cdd:COG4886 23 TLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTN-LTEL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 315 PQSDIYEIFSNMNIINFTVSGTRMVHMlcPSKISPFLHL---DFSNNLLTDtVFENCGHLTELETLILQMNQLKELSKIA 391
Cdd:COG4886 102 DLSGNEELSNLTNLESLDLSGNQLTDL--PEELANLTNLkelDLSNNQLTD-LPEPLGNLTNLKSLDLSNNQLTDLPEEL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 392 EmttQMKSLQQLDISQNSVSydEKKGDCSWTKSLLSLNMSSNVLTD---TIFRClpPRIKVLDLHSNKIKSIPkQVVKLE 468
Cdd:COG4886 179 G---NLTNLKELDLSNNQIT--DLPEPLGNLTNLEELDLSGNQLTDlpePLANL--TNLETLDLSNNQLTDLP-ELGNLT 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1800033781 469 ALQELNVAFNSLTDLPGCGSFSGLSVLIIDHNSVSHPSADFFQSCQKMRSIKAGNNPFQCTCELREFVKNIDQ 541
Cdd:COG4886 251 NLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTL 323
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
29-152 |
1.47e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 67.27 E-value: 1.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 29 VDRSKNGLIYVPKDLSQKT--TILNISQNYISELqTSDILSLSKLRILIISHNRIQYLDMSVFKFNQeLEYLDLSHNKLA 106
Cdd:COG4886 118 LDLSGNQLTDLPEELANLTnlKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEELGNLTN-LKELDLSNNQIT 195
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1800033781 107 KISCHPT--VNLKHLDLSFNAFDALPicKEFGNMSQLKFLGLSTTHLE 152
Cdd:COG4886 196 DLPEPLGnlTNLEELDLSGNQLTDLP--EPLANLTNLETLDLSNNQLT 241
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
32-272 |
4.74e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 65.73 E-value: 4.74e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 32 SKNGLIYVPKDLSQ--KTTILNISQNYISELQTSdILSLSKLRILIISHNRIQYLDMSVFKFNQeLEYLDLSHNKLAKIs 109
Cdd:COG4886 167 SNNQLTDLPEELGNltNLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTDLPEPLANLTN-LETLDLSNNQLTDL- 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 110 chPTV----NLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNIGKVLLVLGETYGEKEDPEGLQ 185
Cdd:COG4886 244 --PELgnltNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLT 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 186 DFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNECSYFLNILAKLQTNPKLSSLTLNNIETTWNSFIRIL 265
Cdd:COG4886 322 TLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVL 401
|
....*..
gi 1800033781 266 QLVWHTT 272
Cdd:COG4886 402 LLTLALL 408
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
352-560 |
3.29e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 63.71 E-value: 3.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 352 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKelSKIAEMTTQMKSLQQLDISQNSVSyDEKKGDCSWTKSLLSLNMS 431
Cdd:PLN00113 240 HLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLS--GPIPPSIFSLQKLISLDLSDNSLS-GEIPELVIQLQNLEILHLF 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 432 SNVLTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAFNSLT-DLPGCGSFSG-LSVLIIDHNSVSHPS 506
Cdd:PLN00113 317 SNNFTGKIPVALTslPRLQVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCSSGnLFKLILFSNSLEGEI 396
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1800033781 507 ADFFQSCQKMRSIKAGNNPFqcTCEL-REFVK----NIDQVSSEVVEGWPDSYKCDYPE 560
Cdd:PLN00113 397 PKSLGACRSLRRVRLQDNSF--SGELpSEFTKlplvYFLDISNNNLQGRINSRKWDMPS 453
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
524-577 |
8.69e-09 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 52.05 E-value: 8.69e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1800033781 524 NPFQCTCELREFVKNIDQvssEVVEGWPDSYKCDYPESYRGtLLKDFHMSELSC 577
Cdd:smart00082 1 NPFICDCELRWLLRWLQA---NEHLQDPVDLRCASPSSLRG-PLLELLHSEFKC 50
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
69-126 |
6.38e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.83 E-value: 6.38e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1800033781 69 SKLRILIISHNRIQYLDMSVFKFNQELEYLDLSHNKLAKIS---CHPTVNLKHLDLSFNAF 126
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSpgaFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
48-105 |
8.73e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 46.75 E-value: 8.73e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1800033781 48 TILNISQNYISELQTSDILSLSKLRILIISHNRIQYLDMSVFKFNQELEYLDLSHNKL 105
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
353-474 |
7.88e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 48.51 E-value: 7.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 353 LDFSNNLLTD----TVFENCGHLTELETLILQMNQL--KELSKIAEMTTQMKSLQQLDISQNSVS----YDEKKGDCSWT 422
Cdd:cd00116 170 LNLANNGIGDagirALAEGLKANCNLEVLDLNNNGLtdEGASALAETLASLKSLEVLNLGDNNLTdagaAALASALLSPN 249
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1800033781 423 KSLLSLNMSSNVLTDTIFRCL------PPRIKVLDLHSNKIKSIPKQVVKLEALQELN 474
Cdd:cd00116 250 ISLLTLSLSCNDITDDGAKDLaevlaeKESLLELDLRGNKFGEEGAQLLAESLLEPGN 307
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
2-152 |
9.28e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 48.78 E-value: 9.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 2 TGIFPFAIIFMLILQIRIQLSEESEFLVDRSKNGLIYVPKDLSQKTTILNISQNYISELQTSDILSLSKLRILIISHNRI 81
Cdd:COG4886 29 LLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEE 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1800033781 82 qyldmsvFKFNQELEYLDLSHNKLAKISCHPT--VNLKHLDLSFNAFDALPicKEFGNMSQLKFLGLSTTHLE 152
Cdd:COG4886 109 -------LSNLTNLESLDLSGNQLTDLPEELAnlTNLKELDLSNNQLTDLP--EPLGNLTNLKSLDLSNNQLT 172
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
316-484 |
7.44e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 46.23 E-value: 7.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 316 QSDIYEIFSNMNIInftvsgTRMVHMLcPSKISpflHLDFSNNLLTdtvfENCGHL-TELETLILQMNQLKELSKiaemt 394
Cdd:PRK15370 219 QGNIKTLYANSNQL------TSIPATL-PDTIQ---EMELSINRIT----ELPERLpSALQSLDLFHNKISCLPE----- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 395 TQMKSLQQLDISQNSVSYDEKKgdcsWTKSLLSLNMSSNVLT----------------DTIFRCLP----PRIKVLDLHS 454
Cdd:PRK15370 280 NLPEELRYLSVYDNSIRTLPAH----LPSGITHLNVQSNSLTalpetlppglktleagENALTSLPaslpPELQVLDVSK 355
|
170 180 190
....*....|....*....|....*....|
gi 1800033781 455 NKIKSIPKQVVKleALQELNVAFNSLTDLP 484
Cdd:PRK15370 356 NQITVLPETLPP--TITTLDVSRNALTNLP 383
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
33-130 |
1.22e-04 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 45.46 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 33 KNGLIYVPKDLSQKTTILNISQNYISELQTSdilSLSKLRILIISHNRIQYLDMSVfkfNQELEYLDLSHNKLAKISCHP 112
Cdd:PRK15370 229 SNQLTSIPATLPDTIQEMELSINRITELPER---LPSALQSLDLFHNKISCLPENL---PEELRYLSVYDNSIRTLPAHL 302
|
90
....*....|....*...
gi 1800033781 113 TVNLKHLDLSFNAFDALP 130
Cdd:PRK15370 303 PSGITHLNVQSNSLTALP 320
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
273-435 |
3.46e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 44.07 E-value: 3.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 273 VWYFSISNVKLQGRLDFRDFNYsgTSLKALSIhqVVSDVF-NFPQSdiyeiFSNMNIINFTVSGTRMVHMLcPSK---IS 348
Cdd:PLN00113 430 VYFLDISNNNLQGRINSRKWDM--PSLQMLSL--ARNKFFgGLPDS-----FGSKRLENLDLSRNQFSGAV-PRKlgsLS 499
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 349 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKelSKIAEMTTQMKSLQQLDISQNSVSYDEKKgDCSWTKSLLSL 428
Cdd:PLN00113 500 ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS--GQIPASFSEMPVLSQLDLSQNQLSGEIPK-NLGNVESLVQV 576
|
....*..
gi 1800033781 429 NMSSNVL 435
Cdd:PLN00113 577 NISHNHL 583
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
43-109 |
9.39e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 41.31 E-value: 9.39e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 43 LSQKTTILNISQNYISELqtSDILSLSKLRILIISHNRIQYLD---MSVFKFNQeLEYLDLSHNKLAKIS 109
Cdd:cd21340 118 LSNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEellDLLSSWPS-LRELDLTGNPVCKKP 184
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
445-500 |
9.90e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.89 E-value: 9.90e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 445 PRIKVLDLHSNKIKSIPKQV-VKLEALQELNVAFNSLTDLPGcGSFSGLS---VLIIDHN 500
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLSP-GAFSGLPslrYLDLSGN 59
|
|
| LRRCT |
pfam01463 |
Leucine rich repeat C-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
553-577 |
1.47e-03 |
|
Leucine rich repeat C-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the C-terminus of tandem leucine rich repeats.
Pssm-ID: 279765 Cd Length: 26 Bit Score: 36.65 E-value: 1.47e-03
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
352-411 |
2.68e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.15 E-value: 2.68e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 352 HLDFSNNLLTDTvfENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 411
Cdd:cd21340 124 VLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGNPVC 181
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
48-147 |
5.85e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 39.00 E-value: 5.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1800033781 48 TILNISQNYISELQtsDILSLSKLRILIISHNRIQ--------------YLD--------------MSVFKFNQELEYLD 99
Cdd:cd21340 49 THLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISvveglenltnleelHIEnqrlppgekltfdpRSLAALSNSLRVLN 126
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1800033781 100 LSHNKLAKISC-HPTVNLKHLDLSFNAFDAL-PICKEFGNMSQLKFLGLS 147
Cdd:cd21340 127 ISGNNIDSLEPlAPLRNLEQLDASNNQISDLeELLDLLSSWPSLRELDLT 176
|
|
|