|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
1089-1224 |
8.39e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 147.08 E-value: 8.39e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 1089 FDAFISYSSKDeaFVAEELAPMLENEDPSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSA 1168
Cdd:smart00255 2 YDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 1169 HHQVLRDRRRRLIVILLGEVPQ--KDLDPDIRLYLKTNtYLQWGDKL---FWEKLRFALPD 1224
Cdd:smart00255 80 LENALEEGGLRVIPIFYEVIPSdvRKQPGKFRKVFKKN-YLKWPEDEkeqFWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
243-627 |
9.51e-28 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 117.73 E-value: 9.51e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 243 SNGLNYIADRAFEGLVSLSRLEISLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEW 322
Cdd:COG4886 7 SLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 323 INPATFRGLTKLILLDLSNNKIskleptiFRDLTSLQVLRMQENFIESIAENtFLELTALHTVILSNNRLSTVDhFTFSG 402
Cdd:COG4886 87 LGLTDLGDLTNLTELDLSGNEE-------LSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLP-EPLGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 403 LKSLTLLSLDYNRISRIDRqALRNHSTLQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISSIDnASFRHMAHLYGLRL 482
Cdd:COG4886 158 LTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLP-EPLANLTNLETLDL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 483 TENNIEIIRrgTFEAMKSLHILNLSQNRLKTVEQSSfdNNTKLQAIRLDGNYLTDIAglFTKLPNLLWLNISDNHLEVFD 562
Cdd:COG4886 236 SNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPPLA--NLTNLKTLDLSNNQLTDLK--LKELELLLGLNSLLLLLLLLN 309
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1899709811 563 YALIPTGLQWLDIHANKITELGNYFEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLI 627
Cdd:COG4886 310 LLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
62-606 |
2.60e-23 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 107.63 E-value: 2.60e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 62 NFSVLHPENTVRLrlqcndgLFFQSSLSpGSFKQLTKLHSlSIEYCKianlsegsFQGLkqLTNLTLRTHNTDWS--SIS 139
Cdd:PLN00113 22 NFSMLHAEELELL-------LSFKSSIN-DPLKYLSNWNS-SADVCL--------WQGI--TCNNSSRVVSIDLSgkNIS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 140 LDIAPQVFnsELSKLQRLDLSQNNM-WSVPDGFICPLSRLTYLNLTHNrlrdlsvfHFSASlstrLSKKCGSSIVTLDLS 218
Cdd:PLN00113 83 GKISSAIF--RLPYIQTINLSNNQLsGPIPDDIFTTSSSLRYLNLSNN--------NFTGS----IPRGSIPNLETLDLS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 219 HNTIDNlppAIFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLE---ISLNRLTNLPPELFSEAKHIKEIYLQNN--- 292
Cdd:PLN00113 149 NNMLSG---EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEfltLASNQLVGQIPRELGQMKSLKWIYLGYNnls 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 293 -----------SLNVL----------APGIFSDLKQLLVLDLSNNELTSEwINPATFrGLTKLILLDLSNNKISKLEPTI 351
Cdd:PLN00113 226 geipyeiggltSLNHLdlvynnltgpIPSSLGNLKNLQYLFLYQNKLSGP-IPPSIF-SLQKLISLDLSDNSLSGEIPEL 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 352 FRDLTSLQVLRMQENFIESIAENTFLELTALHTVILSNNRLSTVDHFTFSGLKSLTLLSLDYNRISRIDRQALRNHSTLQ 431
Cdd:PLN00113 304 VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLF 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 432 ELHLNGNKLL-QVPDALYDVPLLRTLDLGENHISSIDNASFRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNR 510
Cdd:PLN00113 384 KLILFSNSLEgEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNK 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 511 LKTVEQSSFdNNTKLQAIRLDGNYLTD-IAGLFTKLPNLLWLNISDNHLEvfdyALIPTGLQW------LDIHANKITEl 583
Cdd:PLN00113 464 FFGGLPDSF-GSKRLENLDLSRNQFSGaVPRKLGSLSELMQLKLSENKLS----GEIPDELSSckklvsLDLSHNQLSG- 537
|
570 580
....*....|....*....|....*..
gi 1899709811 584 gnyfEIESQLA----LSTIDASSNQLT 606
Cdd:PLN00113 538 ----QIPASFSempvLSQLDLSQNQLS 560
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
37-408 |
9.79e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 99.62 E-value: 9.79e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 37 WDGYSEDDLTLLCRLRTINSELENTNFSVLHPENTVRLRLQCNDGLFfqsslspgsfkQLTKLHSLSIEYCKIANLSEgS 116
Cdd:COG4886 64 SLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELS-----------NLTNLESLDLSGNQLTDLPE-E 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 117 FQGLKQLTNLTLRthNTDWSSISLDIapqvfnSELSKLQRLDLSQNNMWSVPDgFICPLSRLTYLNLTHNRLRDLsvfhf 196
Cdd:COG4886 132 LANLTNLKELDLS--NNQLTDLPEPL------GNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL----- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 197 SASLSTRlskkcgSSIVTLDLSHNTIDNLPPAIfSGLGKLTDLRLQSNGLNYIADraFEGLVSLSRLEISLNRLTNLPPE 276
Cdd:COG4886 198 PEPLGNL------TNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLPPL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 277 lfSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFRGLTKLILLDLSNNKISKLEPTIFrDLT 356
Cdd:COG4886 269 --ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLAL-SLS 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1899709811 357 SLQVLRMQENFIESIAENTFLELTALHTVILSNNRLSTVDHFTFSGLKSLTL 408
Cdd:COG4886 346 LLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTT 397
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
1092-1198 |
2.22e-20 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 87.76 E-value: 2.22e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 1092 FISYSSKDEAFVaEELAPMLENEDpsYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSAHHq 1171
Cdd:pfam13676 2 FISYAGEDRAWA-EWLADALEAAG--YRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALA- 77
|
90 100
....*....|....*....|....*..
gi 1899709811 1172 vLRDRRRRLIVILLGEvpqKDLDPDIR 1198
Cdd:pfam13676 78 -DPEGRKRLIPVRLEC---DLELPGLA 100
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
331-509 |
6.08e-18 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 84.07 E-value: 6.08e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 331 LTKLILLDLSNNKISKLEptIFRDLTSLQVLRMQENFIESIAENTFLE-LTALHtviLSNNRLSTVDHFtfSGLKSLTLL 409
Cdd:cd21340 1 LKRITHLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKIENLEFLTnLTHLY---LQNNQIEKIENL--ENLVNLKKL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 410 SLDYNRISRIDrqALRNHSTLQELHL------NGNKLLQVPDALYDV-PLLRTLDLGENHISSIDnaSFRHMAHLYGLRL 482
Cdd:cd21340 74 YLGGNRISVVE--GLENLTNLEELHIenqrlpPGEKLTFDPRSLAALsNSLRVLNISGNNIDSLE--PLAPLRNLEQLDA 149
|
170 180
....*....|....*....|....*....
gi 1899709811 483 TENNIEIIRR--GTFEAMKSLHILNLSQN 509
Cdd:cd21340 150 SNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
283-344 |
4.11e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 62.54 E-value: 4.11e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1899709811 283 HIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSewINPATFRGLTKLILLDLSNNKI 344
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
840-899 |
3.40e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.76 E-value: 3.40e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 840 ELEILQLDHNLLTALNGFEFEGLDSLKELFLQYNRIAQIANHTFDHLHGLKILRLDHNRI 899
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
118-321 |
5.53e-09 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 59.29 E-value: 5.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 118 QGLKQLTNLTLRTHNTdwSSISLDiAPQVFNSELSK--LQRLDLSQNNMWSVPDGFIC-----PLSRLTYLNLTHNRLRD 190
Cdd:cd00116 75 QGLTKGCGLQELDLSD--NALGPD-GCGVLESLLRSssLQELKLNNNGLGDRGLRLLAkglkdLPPALEKLVLGRNRLEG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 191 LSvfhfSASLSTRLSKKCgsSIVTLDLSHNTI-DNLPPAIFSGL---GKLTDLRLQSNGLNYIADRAFEGLV----SLSR 262
Cdd:cd00116 152 AS----CEALAKALRANR--DLKELNLANNGIgDAGIRALAEGLkanCNLEVLDLNNNGLTDEGASALAETLaslkSLEV 225
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1899709811 263 LEISLNRLTN-----LPPELFSEAKHIKEIYLQNNSLNVLAPGIFS----DLKQLLVLDLSNNELTSE 321
Cdd:cd00116 226 LNLGDNNLTDagaaaLASALLSPNISLLTLSLSCNDITDDGAKDLAevlaEKESLLELDLRGNKFGEE 293
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
796-851 |
3.39e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.37 E-value: 3.39e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1899709811 796 IYLDGNNFRSLGSHAFLGRKRLKILFLNGSSVETVSNRTFYGLKELEILQLDHNLL 851
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
794-919 |
3.60e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.25 E-value: 3.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLGShAFLGRKRLKILFLNGSSVETVSNrTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYN 873
Cdd:COG4886 139 KELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN 215
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1899709811 874 RIAQIANhTFDHLHGLKILRLDHNRIVEFNVWHLPKQLNDIRLAFN 919
Cdd:COG4886 216 QLTDLPE-PLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNN 260
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
210-270 |
2.50e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.67 E-value: 2.50e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 210 SSIVTLDLSHNTIDNLPPAIFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLEISLNRL 270
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-899 |
8.64e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 48.24 E-value: 8.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLGSHAFLgrKRLKILFLNGSSVETVSNrtFYGLKELEILQLDHNLLTALNGFEfeGLDSLKELFLQYN 873
Cdd:cd21340 5 THLYLNDKNITKIDNLSLC--KNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIENLE--NLVNLKKLYLGGN 78
|
90 100
....*....|....*....|....*.
gi 1899709811 874 RIAQIANhtFDHLHGLKILRLDHNRI 899
Cdd:cd21340 79 RISVVEG--LENLTNLEELHIENQRL 102
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-920 |
1.38e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.78 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLGShaFLGRKRLKILFLNGSSVETVSNrtFYGLKELEILQLDHNLLTALNGFEFEG------LDSLKE 867
Cdd:cd21340 49 THLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPPGEKLTFDPrslaalSNSLRV 124
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1899709811 868 LFLQYNRIAQIANhtFDHLHGLKILRLDHNRIVEFN--VWHLPK--QLNDIRLAFNP 920
Cdd:cd21340 125 LNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSwpSLRELDLTGNP 179
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
831-899 |
7.92e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 43.38 E-value: 7.92e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1899709811 831 SNRTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYNRIAQIANhTFDHLHGLKILRLDHNRI 899
Cdd:COG4886 105 GNEELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQL 171
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
616-660 |
9.45e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 9.45e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1899709811 616 SVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLDPNALR 660
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFS 46
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
1089-1224 |
8.39e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 147.08 E-value: 8.39e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 1089 FDAFISYSSKDeaFVAEELAPMLENEDPSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSA 1168
Cdd:smart00255 2 YDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 1169 HHQVLRDRRRRLIVILLGEVPQ--KDLDPDIRLYLKTNtYLQWGDKL---FWEKLRFALPD 1224
Cdd:smart00255 80 LENALEEGGLRVIPIFYEVIPSdvRKQPGKFRKVFKKN-YLKWPEDEkeqFWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
243-627 |
9.51e-28 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 117.73 E-value: 9.51e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 243 SNGLNYIADRAFEGLVSLSRLEISLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEW 322
Cdd:COG4886 7 SLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 323 INPATFRGLTKLILLDLSNNKIskleptiFRDLTSLQVLRMQENFIESIAENtFLELTALHTVILSNNRLSTVDhFTFSG 402
Cdd:COG4886 87 LGLTDLGDLTNLTELDLSGNEE-------LSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLP-EPLGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 403 LKSLTLLSLDYNRISRIDRqALRNHSTLQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISSIDnASFRHMAHLYGLRL 482
Cdd:COG4886 158 LTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLP-EPLANLTNLETLDL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 483 TENNIEIIRrgTFEAMKSLHILNLSQNRLKTVEQSSfdNNTKLQAIRLDGNYLTDIAglFTKLPNLLWLNISDNHLEVFD 562
Cdd:COG4886 236 SNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPPLA--NLTNLKTLDLSNNQLTDLK--LKELELLLGLNSLLLLLLLLN 309
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1899709811 563 YALIPTGLQWLDIHANKITELGNYFEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLI 627
Cdd:COG4886 310 LLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
171-587 |
4.84e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 115.80 E-value: 4.84e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 171 FICPLSRLTYLNLTHNRLRDLSVFHFSASLSTRLSKKCGSSIVTLDLSHNTIDNLPPAIFSGLGKLTDLRLQSNGLNYIA 250
Cdd:COG4886 9 TLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 251 DRAFEGLVSLSRLEISLNrltnlppELFSEAKHIKEIYLQNNSLNVLaPGIFSDLKQLLVLDLSNNELTSewiNPATFRG 330
Cdd:COG4886 89 LTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTD---LPEPLGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 331 LTKLILLDLSNNKISKLePTIFRDLTSLQVLRMQENFIESIAEnTFLELTALHTVILSNNRLSTVDHfTFSGLKSLTLLS 410
Cdd:COG4886 158 LTNLKSLDLSNNQLTDL-PEELGNLTNLKELDLSNNQITDLPE-PLGNLTNLEELDLSGNQLTDLPE-PLANLTNLETLD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 411 LDYNRISRIDrqALRNHSTLQELHLNGNKLLQVPDaLYDVPLLRTLDLGENHISSIdnaSFRHMAHLYGLRLTENNIEII 490
Cdd:COG4886 235 LSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPP-LANLTNLKTLDLSNNQLTDL---KLKELELLLGLNSLLLLLLLL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 491 RRGTFEAMKSLHILNLSQNRLKTVEQSSFDNNTKLQAIRLDGNYLTDIAGLFTKLPNLLWLNISDNHLEVFDYALIPTGL 570
Cdd:COG4886 309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLT 388
|
410
....*....|....*..
gi 1899709811 571 QWLDIHANKITELGNYF 587
Cdd:COG4886 389 LLLLLLTTTAGVLLLTL 405
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
265-649 |
8.83e-27 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 114.65 E-value: 8.83e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 265 ISLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFRGLTKLILLDLSNNKI 344
Cdd:COG4886 5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 345 SKLEPTIFRDLTSLQVLRMQENfiesiaeNTFLELTALHTVILSNNRLSTVDHFtFSGLKSLTLLSLDYNRISRIDRqAL 424
Cdd:COG4886 85 LLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTDLPE-PL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 425 RNHSTLQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISSIDNAsfrhmahlyglrltennieiirrgtFEAMKSLHIL 504
Cdd:COG4886 156 GNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPEP-------------------------LGNLTNLEEL 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 505 NLSQNRLKTVEqSSFDNNTKLQAIRLDGNYLTDIAGLfTKLPNLLWLNISDNHLEVFDYALIPTGLQWLDIHANKITELG 584
Cdd:COG4886 211 DLSGNQLTDLP-EPLANLTNLETLDLSNNQLTDLPEL-GNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLK 288
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1899709811 585 -NYFEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGN 649
Cdd:COG4886 289 lKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLL 354
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
95-502 |
1.47e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 111.18 E-value: 1.47e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 95 QLTKLHSLSIEYCKIANLSEGSFQGLKQLTNLTLRTHNTDWSSISLDIAPQVFNSELSKLQRLDLSQNNMWSVPDGFICP 174
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 175 LSRLTYLNLTHNRLRDLSVFhfsaSLSTRLSKKCGSSIVTLDLSHNTIDNLPPAIfSGLGKLTDLRLQSNGLNYIADrAF 254
Cdd:COG4886 82 LSLLLLGLTDLGDLTNLTEL----DLSGNEELSNLTNLESLDLSGNQLTDLPEEL-ANLTNLKELDLSNNQLTDLPE-PL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 255 EGLVSLSRLEISLNRLTNLPPELfSEAKHIKEIYLQNNSLNVLaPGIFSDLKQLLVLDLSNNELTSEwinPATFRGLTKL 334
Cdd:COG4886 156 GNLTNLKSLDLSNNQLTDLPEEL-GNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDL---PEPLANLTNL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 335 ILLDLSNNKISKLEptIFRDLTSLQVLRMQENFIESIAENtfLELTALHTVILSNNRLSTVDHFTFSGLKSLTLLSLDYN 414
Cdd:COG4886 231 ETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLPPL--ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLL 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 415 RISRIDRQALRNHSTLQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISSIDNASFRHMAHLYGLRLTENNIEIIRRGT 494
Cdd:COG4886 307 LLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLL 386
|
....*...
gi 1899709811 495 FEAMKSLH 502
Cdd:COG4886 387 LTLLLLLL 394
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
62-606 |
2.60e-23 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 107.63 E-value: 2.60e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 62 NFSVLHPENTVRLrlqcndgLFFQSSLSpGSFKQLTKLHSlSIEYCKianlsegsFQGLkqLTNLTLRTHNTDWS--SIS 139
Cdd:PLN00113 22 NFSMLHAEELELL-------LSFKSSIN-DPLKYLSNWNS-SADVCL--------WQGI--TCNNSSRVVSIDLSgkNIS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 140 LDIAPQVFnsELSKLQRLDLSQNNM-WSVPDGFICPLSRLTYLNLTHNrlrdlsvfHFSASlstrLSKKCGSSIVTLDLS 218
Cdd:PLN00113 83 GKISSAIF--RLPYIQTINLSNNQLsGPIPDDIFTTSSSLRYLNLSNN--------NFTGS----IPRGSIPNLETLDLS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 219 HNTIDNlppAIFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLE---ISLNRLTNLPPELFSEAKHIKEIYLQNN--- 292
Cdd:PLN00113 149 NNMLSG---EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEfltLASNQLVGQIPRELGQMKSLKWIYLGYNnls 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 293 -----------SLNVL----------APGIFSDLKQLLVLDLSNNELTSEwINPATFrGLTKLILLDLSNNKISKLEPTI 351
Cdd:PLN00113 226 geipyeiggltSLNHLdlvynnltgpIPSSLGNLKNLQYLFLYQNKLSGP-IPPSIF-SLQKLISLDLSDNSLSGEIPEL 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 352 FRDLTSLQVLRMQENFIESIAENTFLELTALHTVILSNNRLSTVDHFTFSGLKSLTLLSLDYNRISRIDRQALRNHSTLQ 431
Cdd:PLN00113 304 VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLF 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 432 ELHLNGNKLL-QVPDALYDVPLLRTLDLGENHISSIDNASFRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNR 510
Cdd:PLN00113 384 KLILFSNSLEgEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNK 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 511 LKTVEQSSFdNNTKLQAIRLDGNYLTD-IAGLFTKLPNLLWLNISDNHLEvfdyALIPTGLQW------LDIHANKITEl 583
Cdd:PLN00113 464 FFGGLPDSF-GSKRLENLDLSRNQFSGaVPRKLGSLSELMQLKLSENKLS----GEIPDELSSckklvsLDLSHNQLSG- 537
|
570 580
....*....|....*....|....*..
gi 1899709811 584 gnyfEIESQLA----LSTIDASSNQLT 606
Cdd:PLN00113 538 ----QIPASFSempvLSQLDLSQNQLS 560
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
44-463 |
5.77e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 100.39 E-value: 5.77e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 44 DLTLLCRLRTINSELENTNFSVLHPENTVRLRLQCNDGLFFQSSLSPGSFKQLTKLHSLSIEYCKIANLSEGSFQGLKQL 123
Cdd:COG4886 13 LLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 124 TNLTLRTHntdwssisLDIAPQVFNSELSKLQRLDLSQNNMWSVPDgFICPLSRLTYLNLTHNRLRDLSvfhfsASLStR 203
Cdd:COG4886 93 GDLTNLTE--------LDLSGNEELSNLTNLESLDLSGNQLTDLPE-ELANLTNLKELDLSNNQLTDLP-----EPLG-N 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 204 LSKkcgssIVTLDLSHNTIDNLPPAIfSGLGKLTDLRLQSNGLNYIADrAFEGLVSLSRLEISLNRLTNLPPELfSEAKH 283
Cdd:COG4886 158 LTN-----LKSLDLSNNQLTDLPEEL-GNLTNLKELDLSNNQITDLPE-PLGNLTNLEELDLSGNQLTDLPEPL-ANLTN 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 284 IKEIYLQNNSLNVLApgIFSDLKQLLVLDLSNNELTSewINPATfrGLTKLILLDLSNNKISKLEptiFRDLTSLQVLRM 363
Cdd:COG4886 230 LETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTD--LPPLA--NLTNLKTLDLSNNQLTDLK---LKELELLLGLNS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 364 QENFIESIAENTFLELTALHTVILSNNRLSTVDHFTFSGLKSLTLLSLDYNRISRIDRQALRNHSTLQELHLNGNKLLQV 443
Cdd:COG4886 301 LLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLL 380
|
410 420
....*....|....*....|
gi 1899709811 444 PDALYDVPLLRTLDLGENHI 463
Cdd:COG4886 381 TLALLLLTLLLLLLTTTAGV 400
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
37-408 |
9.79e-22 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 99.62 E-value: 9.79e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 37 WDGYSEDDLTLLCRLRTINSELENTNFSVLHPENTVRLRLQCNDGLFfqsslspgsfkQLTKLHSLSIEYCKIANLSEgS 116
Cdd:COG4886 64 SLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELS-----------NLTNLESLDLSGNQLTDLPE-E 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 117 FQGLKQLTNLTLRthNTDWSSISLDIapqvfnSELSKLQRLDLSQNNMWSVPDgFICPLSRLTYLNLTHNRLRDLsvfhf 196
Cdd:COG4886 132 LANLTNLKELDLS--NNQLTDLPEPL------GNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL----- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 197 SASLSTRlskkcgSSIVTLDLSHNTIDNLPPAIfSGLGKLTDLRLQSNGLNYIADraFEGLVSLSRLEISLNRLTNLPPE 276
Cdd:COG4886 198 PEPLGNL------TNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLPPL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 277 lfSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFRGLTKLILLDLSNNKISKLEPTIFrDLT 356
Cdd:COG4886 269 --ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLAL-SLS 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1899709811 357 SLQVLRMQENFIESIAENTFLELTALHTVILSNNRLSTVDHFTFSGLKSLTL 408
Cdd:COG4886 346 LLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTT 397
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
311-693 |
2.07e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 98.47 E-value: 2.07e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 311 LDLSNNELTSEWINPATFRGLTKLILLDLSNNKISKLEPTIFRDLTSLQVLRMQENFIESIAENTFLELTALHTVILSNN 390
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 391 RLSTVD--HFTFSGLKSLTLLSLDYNrisridrQALRNHSTLQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISSIDN 468
Cdd:COG4886 81 LLSLLLlgLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 469 AsfrhmahlyglrltennieiirrgtFEAMKSLHILNLSQNRLKTVEqSSFDNNTKLQAIRLDGNYLTDIAGLFTKLPNL 548
Cdd:COG4886 154 P-------------------------LGNLTNLKSLDLSNNQLTDLP-EELGNLTNLKELDLSNNQITDLPEPLGNLTNL 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 549 LWLNISDNHLEVFDYALIP-TGLQWLDIHANKITELGnyfEIESQLALSTIDASSNQLTEITGSAIPNSVELLYLNDNLI 627
Cdd:COG4886 208 EELDLSGNQLTDLPEPLANlTNLETLDLSNNQLTDLP---ELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQL 284
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1899709811 628 SKVQSYTFFKKPNLTRVDLFGNKITTLDPNALRISAVPDDRPLPEFYIGGNPYQCDCNLNWLQKSN 693
Cdd:COG4886 285 TDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALL 350
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
55-445 |
7.26e-21 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 96.93 E-value: 7.26e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 55 NSELENTNFSVLHPENTVRLRLQCNDGLFFQSSLSPGSFKQLTKLHSLSIEYCKianlsegSFQGLKQLTNLTLrtHNTD 134
Cdd:COG4886 54 SLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDL--SGNQ 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 135 WSSISLDIApqvfnsELSKLQRLDLSQNNMWSVPDgFICPLSRLTYLNLTHNRLRDLSvfhfsASLStRLSKkcgssIVT 214
Cdd:COG4886 125 LTDLPEELA------NLTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLP-----EELG-NLTN-----LKE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 215 LDLSHNTIDNLPPAIfSGLGKLTDLRLQSNGLNYIADrAFEGLVSLSRLEISLNRLTNLPPelFSEAKHIKEIYLQNNSL 294
Cdd:COG4886 187 LDLSNNQITDLPEPL-GNLTNLEELDLSGNQLTDLPE-PLANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 295 NVLAPgiFSDLKQLLVLDLSNNELTS---EWINPATFRGLTKLILLDLSNNKISKLEPTIFRDLTSLQVLRMQENFIESI 371
Cdd:COG4886 263 TDLPP--LANLTNLKTLDLSNNQLTDlklKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTL 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1899709811 372 AENTFLELTALHTVILSNNRLSTVDHFTFSGLKSLTLLSLDYNRISRIDRQALRNHSTLQELHLNGNKLLQVPD 445
Cdd:COG4886 341 ALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNTE 414
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
1092-1198 |
2.22e-20 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 87.76 E-value: 2.22e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 1092 FISYSSKDEAFVaEELAPMLENEDpsYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFKSAHHq 1171
Cdd:pfam13676 2 FISYAGEDRAWA-EWLADALEAAG--YRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALA- 77
|
90 100
....*....|....*....|....*..
gi 1899709811 1172 vLRDRRRRLIVILLGEvpqKDLDPDIR 1198
Cdd:pfam13676 78 -DPEGRKRLIPVRLEC---DLELPGLA 100
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
331-509 |
6.08e-18 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 84.07 E-value: 6.08e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 331 LTKLILLDLSNNKISKLEptIFRDLTSLQVLRMQENFIESIAENTFLE-LTALHtviLSNNRLSTVDHFtfSGLKSLTLL 409
Cdd:cd21340 1 LKRITHLYLNDKNITKID--NLSLCKNLKVLYLYDNKITKIENLEFLTnLTHLY---LQNNQIEKIENL--ENLVNLKKL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 410 SLDYNRISRIDrqALRNHSTLQELHL------NGNKLLQVPDALYDV-PLLRTLDLGENHISSIDnaSFRHMAHLYGLRL 482
Cdd:cd21340 74 YLGGNRISVVE--GLENLTNLEELHIenqrlpPGEKLTFDPRSLAALsNSLRVLNISGNNIDSLE--PLAPLRNLEQLDA 149
|
170 180
....*....|....*....|....*....
gi 1899709811 483 TENNIEIIRR--GTFEAMKSLHILNLSQN 509
Cdd:cd21340 150 SNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
1089-1184 |
3.39e-14 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 71.63 E-value: 3.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 1089 FDAFISYSSKD--EAFVAEELAPMLENedpSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLSENFIKSEWCRFEFK 1166
Cdd:pfam01582 1 YDVFLSFRGSDtrEWFVSHLLKELKQK---GIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELV 77
|
90
....*....|....*...
gi 1899709811 1167 SAHHQVLRDrrrRLIVIL 1184
Cdd:pfam01582 78 KILECALDL---GQKVIP 92
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
283-344 |
4.11e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 62.54 E-value: 4.11e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1899709811 283 HIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSewINPATFRGLTKLILLDLSNNKI 344
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
175-427 |
4.24e-11 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 64.04 E-value: 4.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 175 LSRLTYLNLTHNRLRDLSVFHFSASLStrlskkcgssivTLDLSHNTIDNLPPaiFSGLGKLTDLRLQSNglnyiadraf 254
Cdd:cd21340 1 LKRITHLYLNDKNITKIDNLSLCKNLK------------VLYLYDNKITKIEN--LEFLTNLTHLYLQNN---------- 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 255 eglvSLSRLEiSLNRLTNLppelfseakhiKEIYLQNNSLNVLApGiFSDLKQLLVLDLSNNELTSE---WINPATFRGL 331
Cdd:cd21340 57 ----QIEKIE-NLENLVNL-----------KKLYLGGNRISVVE-G-LENLTNLEELHIENQRLPPGeklTFDPRSLAAL 118
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 332 TK-LILLDLSNNKISKLEPtiFRDLTSLQVLRMQENFIESIAE--NTFLELTALHTVILSNNRLSTVDHF-----TFSGl 403
Cdd:cd21340 119 SNsLRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGNPVCKKPKYrdkiiLASK- 195
|
250 260
....*....|....*....|....
gi 1899709811 404 kslTLLSLDYNRISRIDRQALRNH 427
Cdd:cd21340 196 ---SLEVLDGKEITDTERQFLKRL 216
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
233-438 |
2.06e-10 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.11 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 233 LGKLTDLRLQSNGLNYIadrafeglvslsrleislnrltnlppELFSEAKHIKEIYLQNNSLNVLAPgiFSDLKQLLVLD 312
Cdd:cd21340 1 LKRITHLYLNDKNITKI--------------------------DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLY 52
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 313 LSNNELTSewINPatFRGLTKLILLDLSNNKISKLEPtiFRDLTSLQVL-----RMQENF--------IESIAENtflel 379
Cdd:cd21340 53 LQNNQIEK--IEN--LENLVNLKKLYLGGNRISVVEG--LENLTNLEELhienqRLPPGEkltfdprsLAALSNS----- 121
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 380 taLHTVILSNNRLSTVDhfTFSGLKSLTLLSLDYNRISRIDR--QALRNHSTLQELHLNGN 438
Cdd:cd21340 122 --LRVLNISGNNIDSLE--PLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
840-899 |
3.40e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.76 E-value: 3.40e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 840 ELEILQLDHNLLTALNGFEFEGLDSLKELFLQYNRIAQIANHTFDHLHGLKILRLDHNRI 899
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
382-440 |
6.95e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.99 E-value: 6.95e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1899709811 382 LHTVILSNNRLSTVDHFTFSGLKSLTLLSLDYNRISRIDRQALRNHSTLQELHLNGNKL 440
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
90-403 |
1.70e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 62.56 E-value: 1.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 90 PGSFKQLTKLHSLSIEYCKIANLSEGSFQGLKQLTNLTLRThntdwSSISLDIAPQVFnsELSKLQRLDLSQNNMWSVPD 169
Cdd:PLN00113 253 PSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSD-----NSLSGEIPELVI--QLQNLEILHLFSNNFTGKIP 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 170 GFICPLSRLTYLNLTHNRL-----------RDLSVFHFSA-SLSTRLSKKCGSS--IVTLDLSHNTIDNLPPAIFSGLGK 235
Cdd:PLN00113 326 VALTSLPRLQVLQLWSNKFsgeipknlgkhNNLTVLDLSTnNLTGEIPEGLCSSgnLFKLILFSNSLEGEIPKSLGACRS 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 236 LTDLRLQSNGLN-------------------------YIADRAFE----GLVSLSR------------------LEISLN 268
Cdd:PLN00113 406 LRRVRLQDNSFSgelpseftklplvyfldisnnnlqgRINSRKWDmpslQMLSLARnkffgglpdsfgskrlenLDLSRN 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 269 RLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWinPATFRGLTKLILLDLSNNKISKLE 348
Cdd:PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI--PASFSEMPVLSQLDLSQNQLSGEI 563
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1899709811 349 PTIFRDLTSLQVLRMQENFIESIAENT--FLELTAlhTVILSNNRLSTVDhfTFSGL 403
Cdd:PLN00113 564 PKNLGNVESLVQVNISHNHLHGSLPSTgaFLAINA--SAVAGNIDLCGGD--TTSGL 616
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
816-875 |
2.93e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.45 E-value: 2.93e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 816 RLKILFLNGSSVETVSNRTFYGLKELEILQLDHNLLTALNGFEFEGLDSLKELFLQYNRI 875
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
118-321 |
5.53e-09 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 59.29 E-value: 5.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 118 QGLKQLTNLTLRTHNTdwSSISLDiAPQVFNSELSK--LQRLDLSQNNMWSVPDGFIC-----PLSRLTYLNLTHNRLRD 190
Cdd:cd00116 75 QGLTKGCGLQELDLSD--NALGPD-GCGVLESLLRSssLQELKLNNNGLGDRGLRLLAkglkdLPPALEKLVLGRNRLEG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 191 LSvfhfSASLSTRLSKKCgsSIVTLDLSHNTI-DNLPPAIFSGL---GKLTDLRLQSNGLNYIADRAFEGLV----SLSR 262
Cdd:cd00116 152 AS----CEALAKALRANR--DLKELNLANNGIgDAGIRALAEGLkanCNLEVLDLNNNGLTDEGASALAETLaslkSLEV 225
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1899709811 263 LEISLNRLTN-----LPPELFSEAKHIKEIYLQNNSLNVLAPGIFS----DLKQLLVLDLSNNELTSE 321
Cdd:cd00116 226 LNLGDNNLTDagaaaLASALLSPNISLLTLSLSCNDITDDGAKDLAevlaEKESLLELDLRGNKFGEE 293
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
451-511 |
6.10e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 53.30 E-value: 6.10e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 451 PLLRTLDLGENHISSIDNASFRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRL 511
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
259-318 |
6.41e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 53.30 E-value: 6.41e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 259 SLSRLEISLNRLTNLPPELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNEL 318
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
307-366 |
1.27e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 52.53 E-value: 1.27e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 307 QLLVLDLSNNELTSewINPATFRGLTKLILLDLSNNKISKLEPTIFRDLTSLQVLRMQEN 366
Cdd:pfam13855 2 NLRSLDLSNNRLTS--LDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
433-653 |
1.48e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 56.72 E-value: 1.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 433 LHLNGNKLLQVPDaLYDVPLLRTLDLGENHISSIDN-ASFRHMAHLYglrLTENNIEIIRRgtFEAMKSLHILNLSQNRL 511
Cdd:cd21340 7 LYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKIENlEFLTNLTHLY---LQNNQIEKIEN--LENLVNLKKLYLGGNRI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 512 KTVEqssfdnntklqairldgnyltdiaGLfTKLPNLLWLNISDNHLevfdyaliPTGLQWLdihankitelgnyFEIES 591
Cdd:cd21340 81 SVVE------------------------GL-ENLTNLEELHIENQRL--------PPGEKLT-------------FDPRS 114
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1899709811 592 QLALS----TIDASSNQLTEITGSAIPNSVELLYLNDNLISKVQ--SYTFFKKPNLTRVDLFGNKITT 653
Cdd:cd21340 115 LAALSnslrVLNISGNNIDSLEPLAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCK 182
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
93-366 |
1.76e-08 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 57.75 E-value: 1.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 93 FKQLTKLHSLSIEYCkiaNLSEGSFQGL-------KQLTNLTLRTHNTDWSSISLDIAPQVFNSeLSKLQRLDLSQNNmw 165
Cdd:cd00116 19 LPKLLCLQVLRLEGN---TLGEEAAKALasalrpqPSLKELCLSLNETGRIPRGLQSLLQGLTK-GCGLQELDLSDNA-- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 166 SVPDGfiCPL-------SRLTYLNLTHNRLRDLSVFHFSASLstrlsKKCGSSIVTLDLSHNTIDNLPPA----IFSGLG 234
Cdd:cd00116 93 LGPDG--CGVlesllrsSSLQELKLNNNGLGDRGLRLLAKGL-----KDLPPALEKLVLGRNRLEGASCEalakALRANR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 235 KLTDLRLQSNGLNyiaDRAFEGLVslsrleislnrltnlppELFSEAKHIKEIYLQNNSLN----VLAPGIFSDLKQLLV 310
Cdd:cd00116 166 DLKELNLANNGIG---DAGIRALA-----------------EGLKANCNLEVLDLNNNGLTdegaSALAETLASLKSLEV 225
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1899709811 311 LDLSNNELTSEWI---NPATFRGLTKLILLDLSNNKI----SKLEPTIFRDLTSLQVLRMQEN 366
Cdd:cd00116 226 LNLGDNNLTDAGAaalASALLSPNISLLTLSLSCNDItddgAKDLAEVLAEKESLLELDLRGN 288
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
476-535 |
2.84e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.37 E-value: 2.84e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 476 HLYGLRLTENNIEIIRRGTFEAMKSLHILNLSQNRLKTVEQSSFDNNTKLQAIRLDGNYL 535
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
796-851 |
3.39e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.37 E-value: 3.39e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1899709811 796 IYLDGNNFRSLGSHAFLGRKRLKILFLNGSSVETVSNRTFYGLKELEILQLDHNLL 851
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
157-417 |
3.56e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 58.17 E-value: 3.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 157 LDLSQNNMWSVPD---GFICPLS----RLTYLNLThnrLRD-LSVFHFSASLSTRLSKKCGSSIVTLDLSHNTIDNLPPA 228
Cdd:PRK15370 204 LILDNNELKSLPEnlqGNIKTLYansnQLTSIPAT---LPDtIQEMELSINRITELPERLPSALQSLDLFHNKISCLPEN 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 229 IfsglgkltdlrlqSNGLNYiadrafeglvslsrLEISLNRLTNLPPELFSEakhIKEIYLQNNSLNVLAPGIFSDLKql 308
Cdd:PRK15370 281 L-------------PEELRY--------------LSVYDNSIRTLPAHLPSG---ITHLNVQSNSLTALPETLPPGLK-- 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 309 lVLDLSNNELTS--EWINPAtfrgltkLILLDLSNNKISKLEPTIFRDLTSLQVLRmqeNFIESIAENTfleLTALHTVI 386
Cdd:PRK15370 329 -TLEAGENALTSlpASLPPE-------LQVLDVSKNQITVLPETLPPTITTLDVSR---NALTNLPENL---PAALQIMQ 394
|
250 260 270
....*....|....*....|....*....|....*
gi 1899709811 387 LSNNRLS----TVDHFTFSGLKSLTLLsLDYNRIS 417
Cdd:PRK15370 395 ASRNNLVrlpeSLPHFRGEGPQPTRII-VEYNPFS 428
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
794-919 |
3.60e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.25 E-value: 3.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLGShAFLGRKRLKILFLNGSSVETVSNrTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYN 873
Cdd:COG4886 139 KELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN 215
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1899709811 874 RIAQIANhTFDHLHGLKILRLDHNRIVEFNVWHLPKQLNDIRLAFN 919
Cdd:COG4886 216 QLTDLPE-PLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNN 260
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
794-920 |
4.32e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.25 E-value: 4.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLGShAFLGRKRLKILFLNGSSVETVSNrTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYN 873
Cdd:COG4886 162 KSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLPE-PLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNN 238
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1899709811 874 RIAQIANhtFDHLHGLKILRLDHNRIVEFNVWHLPKQLNDIRLAFNP 920
Cdd:COG4886 239 QLTDLPE--LGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQ 283
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
500-558 |
1.26e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.83 E-value: 1.26e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 500 SLHILNLSQNRLKTVEQSSFDNNTKLQAIRLDGNYLTDI-AGLFTKLPNLLWLNISDNHL 558
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
309-596 |
2.37e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 54.28 E-value: 2.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 309 LVLDLSNNEL-TSEWINpaTFRGLTKLILLDLSNNKISKLE----PTIFRDLTSLQVLRMQENFIESIAENTFLELTALh 383
Cdd:cd00116 1 LQLSLKGELLkTERATE--LLPKLLCLQVLRLEGNTLGEEAakalASALRPQPSLKELCLSLNETGRIPRGLQSLLQGL- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 384 tviLSNNRLSTVDHFT--FSGLKSLTLlsldynrisridrQALRNHSTLQELHLNGNKLLQ-----VPDALYDVPL-LRT 455
Cdd:cd00116 78 ---TKGCGLQELDLSDnaLGPDGCGVL-------------ESLLRSSSLQELKLNNNGLGDrglrlLAKGLKDLPPaLEK 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 456 LDLGEN---HISSIDNAS-FRHMAHLYGLRLTENNI--EIIRRgTFEAMKS---LHILNLSQNRLkTVEQSS-----FDN 521
Cdd:cd00116 142 LVLGRNrleGASCEALAKaLRANRDLKELNLANNGIgdAGIRA-LAEGLKAncnLEVLDLNNNGL-TDEGASalaetLAS 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 522 NTKLQAIRLDGNYLTD--IA----GLFTKLPNLLWLNISDNHLE----------VFDYALiptgLQWLDIHANKITELGN 585
Cdd:cd00116 220 LKSLEVLNLGDNNLTDagAAalasALLSPNISLLTLSLSCNDITddgakdlaevLAEKES----LLELDLRGNKFGEEGA 295
|
330
....*....|.
gi 1899709811 586 YFEIESQLALS 596
Cdd:cd00116 296 QLLAESLLEPG 306
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
210-270 |
2.50e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.67 E-value: 2.50e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 210 SSIVTLDLSHNTIDNLPPAIFSGLGKLTDLRLQSNGLNYIADRAFEGLVSLSRLEISLNRL 270
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
337-416 |
4.37e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.29 E-value: 4.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 337 LDLSNNKISKLEPTIFRDLTSLQVLrmqenfiesiaentfleltalhtvILSNNRLSTVDHFTFSGLKSLTLLSLDYNRI 416
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVL------------------------DLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
409-653 |
2.07e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.20 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 409 LSLDYNRISRID-RQALRNHSTLQELHLNGNKL-----LQVPDALYDVPLLRTLDLGENHISSIDNA------SFRHMAH 476
Cdd:cd00116 3 LSLKGELLKTERaTELLPKLLCLQVLRLEGNTLgeeaaKALASALRPQPSLKELCLSLNETGRIPRGlqsllqGLTKGCG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 477 LYGLRLTENNIEIIRRGTFEAM---KSLHILNLSQNRL-----KTVEQSSFDNNTKLQAIRLDGNYLT-----DIAGLFT 543
Cdd:cd00116 83 LQELDLSDNALGPDGCGVLESLlrsSSLQELKLNNNGLgdrglRLLAKGLKDLPPALEKLVLGRNRLEgasceALAKALR 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 544 KLPNLLWLNISDNHLEVFDYALI------PTGLQWLDIHANKITELGNYF---EIESQLALSTIDASSNQLTEITGSAIP 614
Cdd:cd00116 163 ANRDLKELNLANNGIGDAGIRALaeglkaNCNLEVLDLNNNGLTDEGASAlaeTLASLKSLEVLNLGDNNLTDAGAAALA 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1899709811 615 N-------SVELLYLNDNLISKVQSYTF----FKKPNLTRVDLFGNKITT 653
Cdd:cd00116 243 SallspniSLLTLSLSCNDITDDGAKDLaevlAEKESLLELDLRGNKFGE 292
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
405-463 |
2.71e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 2.71e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 405 SLTLLSLDYNRISRIDRQALRNHSTLQELHLNGNKLLQV-PDALYDVPLLRTLDLGENHI 463
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
428-487 |
2.87e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.98 E-value: 2.87e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 428 STLQELHLNGNKLLQV-PDALYDVPLLRTLDLGENHISSIDNASFRHMAHLYGLRLTENNI 487
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
235-294 |
4.25e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.21 E-value: 4.25e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 235 KLTDLRLQSNGLNYIADRAFEGLVSLSRLEISLNRLTNLPPELFSEAKHIKEIYLQNNSL 294
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
88-463 |
5.75e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 50.56 E-value: 5.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 88 LSPGSFKQLTKLHSLSIEYCKIANLSEGSFQGLKQLtnltLRTHNTDWSSIS------LDIAPQVFNSELSKLQRLDLSQ 161
Cdd:COG5238 13 EELLSANPATTEQSELTKRATIVNLRSYHLHGGAIL----LARYLQSRSSITqylrfeGQGDPGLNPVALEKAAEAFPTQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 162 nnMWSVPDGFICPLSRLTYLNLT---HNRLRDLSVFHFSASLSTRlskkcGSSIVTLDLSHNTIDNLPPAIFSGLGKLTD 238
Cdd:COG5238 89 --LLVVDWEGAEEVSPVALAETAtavATPPPDLRRIMAKTLEDSL-----ILYLALPRRINLIQVLKDPLGGNAVHLLGL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 239 LRLQSnGLNYIADRAFEGLVSLSRLEISLNRLTNLPPELFSEA----KHIKEIYLQNNSLNVL-APGIFSDL---KQLLV 310
Cdd:COG5238 162 AARLG-LLAAISMAKALQNNSVETVYLGCNQIGDEGIEELAEAltqnTTVTTLWLKRNPIGDEgAEILAEALkgnKSLTT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 311 LDLSNNELTSEWINpATFRGL---TKLILLDLSNNKIS----KLEPTIFRDLTSLQVLRMQENFI-----ESIAENtfLE 378
Cdd:COG5238 241 LDLSNNQIGDEGVI-ALAEALknnTTVETLYLSGNQIGaegaIALAKALQGNTTLTSLDLSVNRIgdegaIALAEG--LQ 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 379 LTA-LHTVILSNNRLSTVD-HFTFSGLK---SLTLLSLDYNRISRIDR----QALRNHSTLQELHLNGNKL-----LQVP 444
Cdd:COG5238 318 GNKtLHTLNLAYNGIGAQGaIALAKALQentTLHSLDLSDNQIGDEGAialaKYLEGNTTLRELNLGKNNIgkqgaEALI 397
|
410
....*....|....*....
gi 1899709811 445 DALyDVPLLRTLDLGENHI 463
Cdd:COG5238 398 DAL-QTNRLHTLILDGNLI 415
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-899 |
8.64e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 48.24 E-value: 8.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLGSHAFLgrKRLKILFLNGSSVETVSNrtFYGLKELEILQLDHNLLTALNGFEfeGLDSLKELFLQYN 873
Cdd:cd21340 5 THLYLNDKNITKIDNLSLC--KNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKIENLE--NLVNLKKLYLGGN 78
|
90 100
....*....|....*....|....*.
gi 1899709811 874 RIAQIANhtFDHLHGLKILRLDHNRI 899
Cdd:cd21340 79 RISVVEG--LENLTNLEELHIENQRL 102
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
391-611 |
2.46e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 48.92 E-value: 2.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 391 RLSTVDHFTfsgLKSLTLLSLDYNRISRIDRQAlrnHSTLQELHLNGNKLLQVPDALYDVplLRTLDLGENHISSIDNas 470
Cdd:PRK15370 189 GLTTIPACI---PEQITTLILDNNELKSLPENL---QGNIKTLYANSNQLTSIPATLPDT--IQEMELSINRITELPE-- 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 471 fRHMAHLYGLRLTENNIEIIRRGTFEAMKSLHILNlsqNRLKT---------VEQSSFDNN---------TKLQAIRLDG 532
Cdd:PRK15370 259 -RLPSALQSLDLFHNKISCLPENLPEELRYLSVYD---NSIRTlpahlpsgiTHLNVQSNSltalpetlpPGLKTLEAGE 334
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1899709811 533 NYLTDIAGLFTklPNLLWLNISDNHLEVFDYALIPTgLQWLDIHANKITELGNYFEIesqlALSTIDASSNQLTEITGS 611
Cdd:PRK15370 335 NALTSLPASLP--PELQVLDVSKNQITVLPETLPPT-ITTLDVSRNALTNLPENLPA----ALQIMQASRNNLVRLPES 406
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
289-368 |
8.14e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 47.12 E-value: 8.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 289 LQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWinPATFRGLTKLILLDLSNNKISKLEPTIFRDLTSLQVLRMQENFI 368
Cdd:PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNI--PPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
794-920 |
1.38e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.78 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLGShaFLGRKRLKILFLNGSSVETVSNrtFYGLKELEILQLDHNLLTALNGFEFEG------LDSLKE 867
Cdd:cd21340 49 THLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPPGEKLTFDPrslaalSNSLRV 124
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1899709811 868 LFLQYNRIAQIANhtFDHLHGLKILRLDHNRIVEFN--VWHLPK--QLNDIRLAFNP 920
Cdd:cd21340 125 LNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSwpSLRELDLTGNP 179
|
|
| LRR_9 |
pfam14580 |
Leucine-rich repeat; |
337-417 |
1.77e-04 |
|
Leucine-rich repeat;
Pssm-ID: 405295 [Multi-domain] Cd Length: 175 Bit Score: 43.60 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 337 LDLSNNKISKLEPtiFRDLTSLQVLRMQENFIESIAENTFLELTALHTVILSNNRL-STVDHFTFSGLKSLTLLSLDYNR 415
Cdd:pfam14580 47 IDFSDNEIRKLDG--FPLLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNNLqELGDLDPLASLKKLTFLSLLRNP 124
|
..
gi 1899709811 416 IS 417
Cdd:pfam14580 125 VT 126
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
523-580 |
2.04e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.59 E-value: 2.04e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 523 TKLQAIRLDGNYLTDI-AGLFTKLPNLLWLNISDNHLEVFDYALI--PTGLQWLDIHANKI 580
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGAFsgLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
374-455 |
4.63e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 44.42 E-value: 4.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 374 NTFLELTALHTVILSNNRLSTVDHFTFSGLKSLTLLSLDYNRISRIDRQALRNHSTLQELHLNGNKLL-QVPDALYDVPL 452
Cdd:PLN03150 436 NDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSgRVPAALGGRLL 515
|
...
gi 1899709811 453 LRT 455
Cdd:PLN03150 516 HRA 518
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
122-188 |
5.18e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.43 E-value: 5.18e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1899709811 122 QLTNLTLrthntdWSSISLDIAPQVFNSeLSKLQRLDLSQNNMWSVPDGFICPLSRLTYLNLTHNRL 188
Cdd:pfam13855 2 NLRSLDL------SNNRLTSLDDGAFKG-LSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
368-584 |
6.96e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 43.63 E-value: 6.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 368 IESIAENTFLELT-ALHTVILSNNRLSTVDHFTFSGLK--SLTLLSLDYNRISRIDRQALRNH----STLQELHLNGNKL 440
Cdd:COG5238 141 INLIQVLKDPLGGnAVHLLGLAARLGLLAAISMAKALQnnSVETVYLGCNQIGDEGIEELAEAltqnTTVTTLWLKRNPI 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 441 --LQVP---DALYDVPLLRTLDLGENHISS----------IDNASFRHMaHLYGLRLTENNIEIIRRgTFEAMKSLHILN 505
Cdd:COG5238 221 gdEGAEilaEALKGNKSLTTLDLSNNQIGDegvialaealKNNTTVETL-YLSGNQIGAEGAIALAK-ALQGNTTLTSLD 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 506 LSQNRLK----TVEQSSFDNNTKLQAIRLDGNYLTD-----IAGLFTKLPNLLWLNISDNHLEVFDYALI------PTGL 570
Cdd:COG5238 299 LSVNRIGdegaIALAEGLQGNKTLHTLNLAYNGIGAqgaiaLAKALQENTTLHSLDLSDNQIGDEGAIALakylegNTTL 378
|
250
....*....|....
gi 1899709811 571 QWLDIHANKITELG 584
Cdd:COG5238 379 RELNLGKNNIGKQG 392
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
152-220 |
7.45e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.04 E-value: 7.45e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 152 SKLQRLDLSQNNMWSVPDGFICPLSRLTYLNLTHNRLRDLS--VFHFSASLStrlskkcgssivTLDLSHN 220
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSpgAFSGLPSLR------------YLDLSGN 59
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
831-899 |
7.92e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 43.38 E-value: 7.92e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1899709811 831 SNRTFYGLKELEILQLDHNLLTALnGFEFEGLDSLKELFLQYNRIAQIANhTFDHLHGLKILRLDHNRI 899
Cdd:COG4886 105 GNEELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNNQL 171
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
408-659 |
1.37e-03 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 42.85 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 408 LLSLDYNRISR----IDRQALRNHStLQELHLNGNKLLQ-----VPDALYDVPLLRTLDLGENHISsiDNASFRHMAHLY 478
Cdd:COG5238 157 HLLGLAARLGLlaaiSMAKALQNNS-VETVYLGCNQIGDegieeLAEALTQNTTVTTLWLKRNPIG--DEGAEILAEALK 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 479 GLrltennieiirrgtfeamKSLHILNLSQNRLKTVEQSSF----DNNTKLQAIRLDGNYLTD-----IAGLFTKLPNLL 549
Cdd:COG5238 234 GN------------------KSLTTLDLSNNQIGDEGVIALaealKNNTTVETLYLSGNQIGAegaiaLAKALQGNTTLT 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 550 WLNISDNHLEVFDYALIPTGLQW------LDIHANKITELGNYF---EIESQLALSTIDASSNQLTEITGSAIPNsvell 620
Cdd:COG5238 296 SLDLSVNRIGDEGAIALAEGLQGnktlhtLNLAYNGIGAQGAIAlakALQENTTLHSLDLSDNQIGDEGAIALAK----- 370
|
250 260 270
....*....|....*....|....*....|....*....
gi 1899709811 621 YLNDNliskvqsytffkkPNLTRVDLFGNKITTLDPNAL 659
Cdd:COG5238 371 YLEGN-------------TTLRELNLGKNNIGKQGAEAL 396
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
91-226 |
3.22e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.54 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 91 GSFKQLTKLHslsIEYCKIANLsEGsFQGLKQLTNLTLRTHNTDwSSISLDIAPQVFNSELSKLQRLDLSQNNMWSVPDg 170
Cdd:cd21340 65 ENLVNLKKLY---LGGNRISVV-EG-LENLTNLEELHIENQRLP-PGEKLTFDPRSLAALSNSLRVLNISGNNIDSLEP- 137
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1899709811 171 fICPLSRLTYLNLTHNRLRDLSVFhfsaslsTRLSKKCgSSIVTLDLSHNTIDNLP 226
Cdd:cd21340 138 -LAPLRNLEQLDASNNQISDLEEL-------LDLLSSW-PSLRELDLTGNPVCKKP 184
|
|
| LRR_5 |
pfam13306 |
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich ... |
235-358 |
3.28e-03 |
|
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
Pssm-ID: 463839 [Multi-domain] Cd Length: 127 Bit Score: 39.07 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 235 KLTDLRLqSNGLNYIADRAFEGLVSLSRLEISlNRLTNLPPELFSEAKhIKEIYLqNNSLNVLAPGIFSDLKQLLVLDLS 314
Cdd:pfam13306 12 SLTSITI-PSSLTSIGEYAFSNCTSLKSITLP-SSLTSIGSYAFYNCS-LTSITI-PSSLTSIGEYAFSNCSNLKSITLP 87
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1899709811 315 NNeLTSewINPATFRGlTKLILLDLSNNkISKLEPTIFRDLTSL 358
Cdd:pfam13306 88 SN-LTS--IGSYAFSN-CSLKSITIPSS-VTTIGSYAFSNCSNL 126
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
794-922 |
3.31e-03 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 41.46 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 794 TQIYLDGNNFRSLgSHAFLGRKRLKILFLNGSSVETVSNrtFYGLKELEILQLDHNLLTALNgfEFEGLDSLKELFLQYN 873
Cdd:COG4886 208 EELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTDLP--PLANLTNLKTLDLSNN 282
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1899709811 874 RIAQIANHTFDHLHGLKILRLDHNRIVEFNVWHLPKQLNDIRLAFNPWS 922
Cdd:COG4886 283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLK 331
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
275-345 |
4.62e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 41.34 E-value: 4.62e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1899709811 275 PELFSEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWinPATFRGLTKLILLDLSNNKIS 345
Cdd:PLN03150 435 PNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI--PESLGQLTSLRILNLNGNSLS 503
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
864-920 |
5.03e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.73 E-value: 5.03e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 864 SLKELFLQYNRIAQIANHTFDHLHGLKILRLDHNRIVEFNV---WHLPKqLNDIRLAFNP 920
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPgafSGLPS-LRYLDLSGNR 60
|
|
| LRR_5 |
pfam13306 |
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich ... |
323-430 |
6.18e-03 |
|
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
Pssm-ID: 463839 [Multi-domain] Cd Length: 127 Bit Score: 38.29 E-value: 6.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1899709811 323 INPATFRGLTKLILLDLSNNkISKLEPTIFRDlTSLQVLRMQENfIESIAENTFLELTALHTVILSNNrLSTVDHFTFSG 402
Cdd:pfam13306 25 IGEYAFSNCTSLKSITLPSS-LTSIGSYAFYN-CSLTSITIPSS-LTSIGEYAFSNCSNLKSITLPSN-LTSIGSYAFSN 100
|
90 100 110
....*....|....*....|....*....|
gi 1899709811 403 --LKSLTLLSLdynrISRIDRQALRNHSTL 430
Cdd:pfam13306 101 csLKSITIPSS----VTTIGSYAFSNCSNL 126
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
616-660 |
9.45e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 9.45e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1899709811 616 SVELLYLNDNLISKVQSYTFFKKPNLTRVDLFGNKITTLDPNALR 660
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFS 46
|
|
| |
