NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1907080392|ref|XP_036012301|]
View 

serine/threonine-protein kinase NLK isoform X2 [Mus musculus]

Protein Classification

NLK family serine/threonine-protein kinase( domain architecture ID 10167616)

NLK (Nemo-Like Kinase) family serine/threonine-protein kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates, and is an atypical mitogen-activated protein kinase (MAPK) that is not regulated by a MAPK kinase

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
STKc_NLK cd07853
Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer ...
2-356 0e+00

Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NLK is an atypical mitogen-activated protein kinase (MAPK) that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. MAPKs are important mediators of cellular responses to extracellular signals. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


:

Pssm-ID: 173748 [Multi-domain]  Cd Length: 372  Bit Score: 760.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSP 81
Cdd:cd07853    18 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd07853    98 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILM 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLS 241
Cdd:cd07853   178 GSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLS 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTGRVYTSDFEPVTNPKFDDTFEKNLSS 321
Cdd:cd07853   258 SQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYTSDFEPSANPPFDDEYEKNLTS 337
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1907080392 322 VRQVKEIIHQFILEQQKGNRVPLCINPQSAAFKSF 356
Cdd:cd07853   338 VRQVKEELHQFILEQQQGNRVPLCINPQSAAFKSF 372
 
Name Accession Description Interval E-value
STKc_NLK cd07853
Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer ...
2-356 0e+00

Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NLK is an atypical mitogen-activated protein kinase (MAPK) that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. MAPKs are important mediators of cellular responses to extracellular signals. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173748 [Multi-domain]  Cd Length: 372  Bit Score: 760.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSP 81
Cdd:cd07853    18 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd07853    98 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILM 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLS 241
Cdd:cd07853   178 GSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLS 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTGRVYTSDFEPVTNPKFDDTFEKNLSS 321
Cdd:cd07853   258 SQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYTSDFEPSANPPFDDEYEKNLTS 337
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1907080392 322 VRQVKEIIHQFILEQQKGNRVPLCINPQSAAFKSF 356
Cdd:cd07853   338 VRQVKEELHQFILEQQQGNRVPLCINPQSAAFKSF 372
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
3-275 1.45e-78

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 242.05  E-value: 1.45e-78
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392    3 VTDPRDGKRVALKKMPNVFQNlVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELM-QSDLHKIIVSP 81
Cdd:smart00220  18 ARDKKTGKLVAIKVIKKKKIK-KDRERILREIKILKKLKHPNIVRLYDVFEDED-----KLYLVMEYCeGGDLFDLLKKR 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILM 161
Cdd:smart00220  92 GRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLAR--QLDPGEKLTTFVGTPEYMAPEVLL 169
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  162 GsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgtpsleamrtacegakAHILRGPHKQPSLPvlytlS 241
Cdd:smart00220 170 G-KGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLEL-----------------------FKKIGKPKPPFPPP-----E 220
                          250       260       270
                   ....*....|....*....|....*....|....
gi 1907080392  242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:smart00220 221 WDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
PTZ00024 PTZ00024
cyclin-dependent protein kinase; Provisional
5-274 5.46e-63

cyclin-dependent protein kinase; Provisional


Pssm-ID: 240233 [Multi-domain]  Cd Length: 335  Bit Score: 204.61  E-value: 5.46e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNV-FQNLVSCKR-----------VFRELKMLCFFKHDNVLSALDIlqpphidYFEE--IYVVTELM 70
Cdd:PTZ00024   30 DTLTGKIVAIKKVKIIeISNDVTKDRqlvgmcgihftTLRELKIMNEIKHENIMGLVDV-------YVEGdfINLVMDIM 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  71 QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-------------VE 137
Cdd:PTZ00024  103 ASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARrygyppysdtlskDE 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 138 ELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSleamRTAC 217
Cdd:PTZ00024  183 TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPN----EDNW 258
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 218 EGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:PTZ00024  259 PQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
3-201 8.29e-41

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 149.78  E-value: 8.29e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKM-PNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDilqpphidYFEE---IYVVTELMQ-SDLHKI 77
Cdd:COG0515    26 ARDLRLGRPVALKVLrPELAADPEARERFRREARALARLNHPNIVRVYD--------VGEEdgrPYLVMEYVEgESLADL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAP 157
Cdd:COG0515    98 LRRRGPLPPAEALRILAQLAEALAAAHAAGIVHRDIKPANILLTPDGRVKLIDFGIARALGGATLTQTGTVVGTPGYMAP 177
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1907080392 158 EILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 201
Cdd:COG0515   178 EQARG-EPVDPRSDVYSLGVTLYELLTGRPPFDGDSPAELLRAH 220
Pkinase pfam00069
Protein kinase domain;
8-275 1.10e-38

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 137.76  E-value: 1.10e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQ-SDLHKIIVSPQPLSS 86
Cdd:pfam00069  23 TGKIVAIKKIKKEKIKKKKDKNILREIKILKKLNHPNIVRLYDAFEDK-----DNLYLVLEYVEgGSLFDLLSEKGAFSE 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYlhsagilhrdikpgnllvnsncvlkicdfglarveeldeSRHMTQEVVTQYYRAPEILmGSRHY 166
Cdd:pfam00069  98 REAKFIMKQILEGLES---------------------------------------GSSLTTFVGTPWYMAPEVL-GGNPY 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SNAIDIWSVGCIFAELLGRRILFQAQSPIQQldlitdllgtpsleamrtacegaKAHILRGPHKQPSLPvlYTLSSqath 246
Cdd:pfam00069 138 GPKVDVWSLGCILYELLTGKPPFPGINGNEI-----------------------YELIIDQPYAFPELP--SNLSE---- 188
                         250       260
                  ....*....|....*....|....*....
gi 1907080392 247 EAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:pfam00069 189 EAKDLLKKLLKKDPSKRLTATQALQHPWF 217
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
64-196 1.07e-16

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 81.38  E-value: 1.07e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  64 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDES 142
Cdd:NF033483   83 YIVMEYVDgRTLKDYIREHGPLSPEEAVEIMIQILSALEHAHRNGIVHRDIKPQNILITKDGRVKVTDFGIARA--LSST 160
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 143 RhMTQevvTQYyrapeiLMGSRHY--------------SnaiDIWSVGCIFAELLGRRILFQAQSPIQ 196
Cdd:NF033483  161 T-MTQ---TNS------VLGTVHYlspeqarggtvdarS---DIYSLGIVLYEMLTGRPPFDGDSPVS 215
 
Name Accession Description Interval E-value
STKc_NLK cd07853
Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer ...
2-356 0e+00

Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NLK is an atypical mitogen-activated protein kinase (MAPK) that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. MAPKs are important mediators of cellular responses to extracellular signals. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173748 [Multi-domain]  Cd Length: 372  Bit Score: 760.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSP 81
Cdd:cd07853    18 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd07853    98 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILM 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLS 241
Cdd:cd07853   178 GSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLS 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTGRVYTSDFEPVTNPKFDDTFEKNLSS 321
Cdd:cd07853   258 SQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYTSDFEPSANPPFDDEYEKNLTS 337
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1907080392 322 VRQVKEIIHQFILEQQKGNRVPLCINPQSAAFKSF 356
Cdd:cd07853   338 VRQVKEELHQFILEQQQGNRVPLCINPQSAAFKSF 372
STKc_MAPK cd07834
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs ...
2-291 5.03e-161

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270828 [Multi-domain]  Cd Length: 329  Bit Score: 454.29  E-value: 5.03e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSP 81
Cdd:cd07834    18 SAYDKRTGRKVAIKKISNVFDDLIDAKRILREIKILRHLKHENIIGLLDILRPPSPEEFNDVYIVTELMETDLHKVIKSP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDES-RHMTQEVVTQYYRAPEIL 160
Cdd:cd07834    98 QPLTDDHIQYFLYQILRGLKYLHSAGVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDkGFLTEYVVTRWYRAPELL 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRT-ACEGAKAHILRGPHKQPslPVLYT 239
Cdd:cd07834   178 LSSKKYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFiSSEKARNYLKSLPKKPK--KPLSE 255
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1907080392 240 LSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCF 291
Cdd:cd07834   256 VFPGASPEAIDLLEKMLVFNPKKRITADEALAHPYLAQLHDPEDEPVAKPPF 307
STKc_TEY_MAPK cd07858
Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; ...
2-335 1.32e-120

Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype of plant MAPKs and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143363 [Multi-domain]  Cd Length: 337  Bit Score: 352.06  E-value: 1.32e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSP 81
Cdd:cd07858    23 SAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd07858   103 QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART-TSEKGDFMTEYVVTRWYRAPELLL 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR-TACEGAKAHILRGPHkQPSLPvLYTL 240
Cdd:cd07858   182 NCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGfIRNEKARRYIRSLPY-TPRQS-FARL 259
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 241 SSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEgrlryhtcmckccfststgrVYTSDFEPVTNPKFDDTFEKNLS 320
Cdd:cd07858   260 FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS--------------------LHDPSDEPVCQTPFSFDFEEDAL 319
                         330
                  ....*....|....*
gi 1907080392 321 SVRQVKEIIHQFILE 335
Cdd:cd07858   320 TEEDIKELIYNEMLA 334
STKc_ERK5 cd07855
Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; ...
2-329 1.87e-118

Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ERK5 (also called Big MAPK1 (BMK1) or MAPK7) has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. MAPKs are important mediators of cellular responses to extracellular signals. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270842 [Multi-domain]  Cd Length: 336  Bit Score: 346.66  E-value: 1.87e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPP-HIDYFEEIYVVTELMQSDLHKIIVS 80
Cdd:cd07855    23 SAIDTKSGQKVAIKKIPNAFDVVTTAKRTLRELKILRHFKHDNIIAIRDILRPKvPYADFKDVYVVLDLMESDLHHIIHS 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV---EELDESRHMTQEVVTQYYRAP 157
Cdd:cd07855   103 DQPLTLEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNENCELKIGDFGMARGlctSPEEHKYFMTEYVATRWYRAP 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM-RTACEGAKAHILRGPHKQPsLPv 236
Cdd:cd07855   183 ELMLSLPEYTQAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLQLILTVLGTPSQAVInAIGADRVRRYIQNLPNKQP-VP- 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 237 LYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEgrlrYHtcmckccfststgrvyTSDFEPVTNPKFDDTFE 316
Cdd:cd07855   261 WETLYPKADQQALDLLSQMLRFDPSERITVAEALQHPFLAK----YH----------------DPDDEPDCAPPFDFDFD 320
                         330
                  ....*....|...
gi 1907080392 317 KNLSSVRQVKEII 329
Cdd:cd07855   321 AEALTREALKEAI 333
STKc_ERK1_2_like cd07849
Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine ...
2-334 1.00e-113

Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270839 [Multi-domain]  Cd Length: 336  Bit Score: 334.66  E-value: 1.00e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKM-PnvFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVS 80
Cdd:cd07849    23 SAVHKPTGQKVAIKKIsP--FEHQTYCLRTLREIKILLRFKHENIIGILDIQRPPTFESFKDVYIVQELMETDLYKLIKT 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 pQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV--EELDESRHMTQEVVTQYYRAPE 158
Cdd:cd07849   101 -QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIadPEHDHTGFLTEYVATRWYRAPE 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTAC-EGAKAHILRGPHKqPSLPvL 237
Cdd:cd07849   180 IMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGILGTPSQEDLNCIIsLKARNYIKSLPFK-PKVP-W 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 238 YTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEgrlrYHTcmckccfststgrvyTSDfEPVT-NPKFDDTFE 316
Cdd:cd07849   258 NKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ----YHD---------------PSD-EPVAeEPFPFDMEL 317
                         330
                  ....*....|....*...
gi 1907080392 317 KNLSSVRQVKEIIHQFIL 334
Cdd:cd07849   318 FDDLPKEKLKELIFEEIM 335
STKc_p38 cd07851
Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs ...
2-335 2.03e-112

Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143356 [Multi-domain]  Cd Length: 343  Bit Score: 331.57  E-value: 2.03e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPP-HIDYFEEIYVVTELMQSDLHKIIVS 80
Cdd:cd07851    33 SAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMKHENVIGLLDVFTPAsSLEDFQDVYLVTHLMGADLNNIVKC 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 pQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEElDEsrhMTQEVVTQYYRAPEIL 160
Cdd:cd07851   113 -QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DE---MTGYVATRWYRAPEIM 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM-RTACEGAKAHIlrgphkqPSLPV--- 236
Cdd:cd07851   188 LNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLkKISSESARNYI-------QSLPQmpk 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 237 --LYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEgrlrYHtcmckccfststgrvyTSDFEPVTnPKFDDT 314
Cdd:cd07851   261 kdFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE----YH----------------DPEDEPVA-PPYDQS 319
                         330       340
                  ....*....|....*....|.
gi 1907080392 315 FEKNLSSVRQVKEIIHQFILE 335
Cdd:cd07851   320 FESRDLTVDEWKELVYDEIMN 340
STKc_MPK1 cd07857
Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; ...
8-329 1.46e-103

Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. MAPKs are important mediators of cellular responses to extracellular signals. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173750 [Multi-domain]  Cd Length: 332  Bit Score: 308.56  E-value: 1.46e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK-HDNV--LSALDILQPphiDYFEEIYVVTELMQSDLHKIIVSPQPL 84
Cdd:cd07857    26 EEETVAIKKITNVFSKKILAKRALRELKLLRHFRgHKNItcLYDMDIVFP---GNFNELYLYEELMEADLHQIIRSGQPL 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR---VEELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd07857   103 TDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARgfsENPGENAGFMTEYVATRWYRAPEIML 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM-RTACEGAKAHILRGPhKQPSLPvLYTL 240
Cdd:cd07857   183 SFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLsRIGSPKAQNYIRSLP-NIPKKP-FESI 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 241 SSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDegrlRYHtcmckccfststgrvyTSDFEPVTNPKFDDTFEkNLS 320
Cdd:cd07857   261 FPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA----IWH----------------DPDDEPVCQKPFDFSFE-SED 319

                  ....*....
gi 1907080392 321 SVRQVKEII 329
Cdd:cd07857   320 SMEELRDMI 328
STKc_CDK_like cd07829
Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs ...
4-275 2.27e-92

Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270823 [Multi-domain]  Cd Length: 282  Bit Score: 278.21  E-value: 2.27e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMPN------VFQNLVsckrvfRELKMLCFFKHDNVLSALDILqpphidYFEE-IYVVTELMQSDLHK 76
Cdd:cd07829    19 KDKKTGEIVALKKIRLdneeegIPSTAL------REISLLKELKHPNIVKLLDVI------HTENkLYLVFEYCDQDLKK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  77 II-VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYR 155
Cdd:cd07829    87 YLdKRPGPLPPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNLLINRDGVLKLADFGLARAFGI-PLRTYTHEVVTLWYR 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 156 APEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEamrtACEGAKAHilrgPHKQPSLP 235
Cdd:cd07829   166 APEILLGSKHYSTAVDIWSVGCIFAELITGKPLFPGDSEIDQLFKIFQILGTPTEE----SWPGVTKL----PDYKPTFP 237
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392 236 V-----LYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07829   238 KwpkndLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282
STKc_Sty1_Hog1 cd07856
Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases ...
2-318 2.29e-91

Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. It is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response. Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. MAPKs are important mediators of cellular responses to extracellular signals. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270843 [Multi-domain]  Cd Length: 328  Bit Score: 277.53  E-value: 2.29e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyFEEIYVVTELMQSDLHKIIVSp 81
Cdd:cd07856    28 SARDQLTGQNVAVKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTS- 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEldesRHMTQEVVTQYYRAPEILM 161
Cdd:cd07856   103 RPLEKQFIQYFLYQILRGLKYVHSAGVIHRDLKPSNILVNENCDLKICDFGLARIQD----PQMTGYVSTRYYRAPEIML 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTAC-EGAKAHILRGPHKQPsLPvLYTL 240
Cdd:cd07856   179 TWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTICsENTLRFVQSLPKRER-VP-FSEK 256
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 241 SSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEgrlrYHTcmckccfststgrvyTSDfEPVTNPKFDDTFEKN 318
Cdd:cd07856   257 FKNADPDAIDLLEKMLVFDPKKRISAAEALAHPYLAP----YHD---------------PTD-EPVADEKFDWSFNDA 314
STKc_TDY_MAPK cd07859
Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; ...
2-335 7.87e-90

Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20 while Oryza sativa contains at least 17 MAPKs. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143364 [Multi-domain]  Cd Length: 338  Bit Score: 273.58  E-value: 7.87e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSP 81
Cdd:cd07859    18 SAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKAN 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHM--TQEVVTQYYRAPEi 159
Cdd:cd07859    98 DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIfwTDYVATRWYRAPE- 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMGS--RHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM-RTACEGAKAHILRGPHKQPSlpv 236
Cdd:cd07859   177 LCGSffSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIsRVRNEKARRYLSSMRKKQPV--- 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 237 lyTLSSQ---ATHEAVHLLCRMLVFDPSKRISAKDALAHPYLdEGrlryhtcmckccfststgrVYTSDFEPVTNP--KF 311
Cdd:cd07859   254 --PFSQKfpnADPLALRLLERLLAFDPKDRPTAEEALADPYF-KG-------------------LAKVEREPSAQPitKL 311
                         330       340
                  ....*....|....*....|....
gi 1907080392 312 DDTFEKNLSSVRQVKEIIHQFILE 335
Cdd:cd07859   312 EFEFERRRLTKEDVRELIYREILE 335
STKc_p38beta cd07878
Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase ...
2-334 5.43e-89

Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase (also called MAPK11); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38beta/MAPK11 is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143383 [Multi-domain]  Cd Length: 343  Bit Score: 271.92  E-value: 5.43e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPP-HIDYFEEIYVVTELMQSDLHKIiVS 80
Cdd:cd07878    33 SAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPAtSIENFNEVYLVTNLMGADLNNI-VK 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDEsrHMTQEVVTQYYRAPEIL 160
Cdd:cd07878   112 CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADD--EMTGYVATRWYRAPEIM 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA-MRTACEGAKAHILRGPH-KQPSLPVLY 238
Cdd:cd07878   188 LNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVlKKISSEHARKYIQSLPHmPQQDLKKIF 267
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 239 tlsSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLdegrLRYHtcmckccfststgrvyTSDFEPVTNPkFDDTFEKN 318
Cdd:cd07878   268 ---RGANPLAIDLLEKMLVLDSDKRISASEALAHPYF----SQYH----------------DPEDEPEAEP-YDESPENK 323
                         330
                  ....*....|....*.
gi 1907080392 319 LSSVRQVKEIIHQFIL 334
Cdd:cd07878   324 ERTIEEWKELTYEEVS 339
STKc_MAPK15-like cd07852
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and ...
5-275 6.50e-88

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and similar MAPKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270841 [Multi-domain]  Cd Length: 337  Bit Score: 268.66  E-value: 6.50e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNLVSCKRVFRELKML-CFFKHDNVLSALDILQPphiDYFEEIYVVTELMQSDLHKIIVSpQP 83
Cdd:cd07852    28 DKKTGEVVALKKIFDAFRNATDAQRTFREIMFLqELNDHPNIIKLLNVIRA---ENDKDIYLVFEYMETDLHAVIRA-NI 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRH---MTQEVVTQYYRAPEI 159
Cdd:cd07852   104 LEDIHKQYIMYQLLKALKYLHSGGVIHRDLKPSNILLNSDCRVKLADFGLARsLSQLEEDDEnpvLTDYVATRWYRAPEI 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS---LEAMRTACegAKAHILRGPHKQPslPV 236
Cdd:cd07852   184 LLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGRPSaedIESIQSPF--AATMLESLPPSRP--KS 259
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1907080392 237 LYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07852   260 LDELFPKASPDALDLLKKLLVFNPNKRLTAEEALRHPYV 298
STKc_p38alpha cd07877
Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase ...
2-316 1.30e-87

Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase (also called MAPK14); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38alpha/MAPK14 is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. p38 kinases MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143382 [Multi-domain]  Cd Length: 345  Bit Score: 268.45  E-value: 1.30e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH-IDYFEEIYVVTELMQSDLHKIiVS 80
Cdd:cd07877    35 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARsLEEFNDVYLVTHLMGADLNNI-VK 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEElDEsrhMTQEVVTQYYRAPEIL 160
Cdd:cd07877   114 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DE---MTGYVATRWYRAPEIM 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM-RTACEGAKAHIlrgphkqPSLPVLYT 239
Cdd:cd07877   190 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLkKISSESARNYI-------QSLTQMPK 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 240 LSSQ-----ATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEgrlrYHtcmckccfststgrvyTSDFEPVTNPkFDDT 314
Cdd:cd07877   263 MNFAnvfigANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ----YH----------------DPDDEPVADP-YDQS 321

                  ..
gi 1907080392 315 FE 316
Cdd:cd07877   322 FE 323
STKc_CDK7 cd07841
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs ...
4-274 1.02e-80

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270833 [Multi-domain]  Cd Length: 298  Bit Score: 249.03  E-value: 1.02e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMPNvfqnlvsCKR----------VFRELKMLCFFKHDNVLSALDILqpPHIDYfeeIYVVTELMQSD 73
Cdd:cd07841    20 RDKETGRIVAIKKIKL-------GERkeakdginftALREIKLLQELKHPNIIGLLDVF--GHKSN---INLVFEFMETD 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  74 LHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEElDESRHMTQEVVTQ 152
Cdd:cd07841    88 LEKVIKDKSiVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFG-SPNRKMTHQVVTR 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 153 YYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEamrtacEGAKAHILRGPHK-- 230
Cdd:cd07841   167 WYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEE------NWPGVTSLPDYVEfk 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392 231 -QPSLPvLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07841   241 pFPPTP-LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284
STKc_JNK cd07850
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the ...
9-275 1.08e-80

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270840 [Multi-domain]  Cd Length: 337  Bit Score: 250.41  E-value: 1.08e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH-IDYFEEIYVVTELMQSDLHKIIvspqPLSSD 87
Cdd:cd07850    25 GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKsLEEFQDVYLVMELMDANLCQVI----QMDLD 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKV--FLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEelDESRHMTQEVVTQYYRAPEILMGsRH 165
Cdd:cd07850   101 HERMsyLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILG-MG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQP-SLPVLY------ 238
Cdd:cd07850   178 YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGySFEELFpdvlfp 257
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 239 ----TLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07850   258 pdseEHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYI 298
STKc_p38gamma cd07880
Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase ...
2-334 2.67e-80

Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase (also called MAPK12); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38gamma/MAPK12 is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. p38 kinases are MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143385 [Multi-domain]  Cd Length: 343  Bit Score: 249.48  E-value: 2.67e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPP-HIDYFEEIYVVTELMQSDLHKIIvS 80
Cdd:cd07880    33 SALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDlSLDRFHDFYLVMPFMGTDLGKLM-K 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveelDESRHMTQEVVTQYYRAPEIL 160
Cdd:cd07880   112 HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QTDSEMTGYVVTRWYRAPEVI 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLE-AMRTACEGAKAHILRGPHKQPSlpVLYT 239
Cdd:cd07880   188 LNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEfVQKLQSEDAKNYVKKLPRFRKK--DFRS 265
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 240 LSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEgrlryhtcmckccfststgrVYTSDFEPVTnPKFDDTFEKNL 319
Cdd:cd07880   266 LLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE--------------------FHDPEDETEA-PPYDDSFDEVD 324
                         330
                  ....*....|....*
gi 1907080392 320 SSVRQVKEIIHQFIL 334
Cdd:cd07880   325 QSLEEWKRLTFTEIL 339
STKc_CDK9_like cd07840
Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs ...
9-274 4.06e-80

Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270832 [Multi-domain]  Cd Length: 291  Bit Score: 247.09  E-value: 4.06e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpnvfqNLVSCKRVF-----RELKMLCFFKHDNVLSALDIL-QPPHIDYFEEIYVVTELMQSDLHKIIVSPQ 82
Cdd:cd07840    24 GELVALKKI-----RMENEKEGFpitaiREIKLLQKLDHPNVVRLKEIVtSKGSAKYKGSIYMVFEYMDHDLTGLLDNPE 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 -PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd07840    99 vKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKENNADYTNRVITLWYRPPELLL 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLpVLYTLS 241
Cdd:cd07840   179 GATRYGPEVDMWSVGCILAELFTGKPIFQGKTELEQLEKIFELCGSPTEENWPGVSDLPWFENLKPKKPYKRR-LREVFK 257
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07840   258 NVIDPSALDLLDKLLTLDPKKRISADQALQHEY 290
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
3-275 1.45e-78

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 242.05  E-value: 1.45e-78
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392    3 VTDPRDGKRVALKKMPNVFQNlVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELM-QSDLHKIIVSP 81
Cdd:smart00220  18 ARDKKTGKLVAIKVIKKKKIK-KDRERILREIKILKKLKHPNIVRLYDVFEDED-----KLYLVMEYCeGGDLFDLLKKR 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILM 161
Cdd:smart00220  92 GRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLAR--QLDPGEKLTTFVGTPEYMAPEVLL 169
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  162 GsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgtpsleamrtacegakAHILRGPHKQPSLPvlytlS 241
Cdd:smart00220 170 G-KGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLEL-----------------------FKKIGKPKPPFPPP-----E 220
                          250       260       270
                   ....*....|....*....|....*....|....
gi 1907080392  242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:smart00220 221 WDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
STKc_GSK3 cd14137
The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze ...
3-277 1.19e-77

The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GSK3 is a mutifunctional kinase involved in many cellular processes including cell division, proliferation, differentiation, adhesion, and apoptosis. In plants, GSK3 plays a role in the response to osmotic stress. In Caenorhabditis elegans, it plays a role in regulating normal oocyte-to-embryo transition and response to oxidative stress. In Chlamydomonas reinhardtii, GSK3 regulates flagellar length and assembly. In mammals, there are two isoforms, GSK3alpha and GSK3beta, which show both distinct and redundant functions. The two isoforms differ mainly in their N-termini. They are both involved in axon formation and in Wnt signaling.They play distinct roles in cardiogenesis, with GSKalpha being essential in cardiomyocyte survival, and GSKbeta regulating heart positioning and left-right symmetry. GSK3beta was first identified as a regulator of glycogen synthesis, but has since been determined to play other roles. It regulates the degradation of beta-catenin and IkB. Beta-catenin is the main effector of Wnt, which is involved in normal haematopoiesis and stem cell function. IkB is a central inhibitor of NF-kB, which is critical in maintaining leukemic cell growth. GSK3beta is enriched in the brain and is involved in regulating neuronal signaling pathways. It is implicated in the pathogenesis of many diseases including Type II diabetes, obesity, mood disorders, Alzheimer's disease, osteoporosis, and some types of cancer, among others. The GSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271039 [Multi-domain]  Cd Length: 293  Bit Score: 240.87  E-value: 1.19e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKmpnVFQNlvscKRvF--RELKMLCFFKHDNVLsALdilqpphIDYF-------EEIY--VVTELMQ 71
Cdd:cd14137    23 AKLLETGEVVAIKK---VLQD----KR-YknRELQIMRRLKHPNIV-KL-------KYFFyssgekkDEVYlnLVMEYMP 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  72 SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKICDFGLARVEELDESRhmT 146
Cdd:cd14137    87 ETLYRVIRHysknKQTIPIIYVKLYSYQLFRGLAYLHSLGICHRDIKPQNLLVDpETGVLKLCDFGSAKRLVPGEPN--V 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 147 QEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILr 226
Cdd:cd14137   165 SYICSRYYRAPELIFGATDYTTAIDIWSAGCVLAELLLGQPLFPGESSVDQLVEIIKVLGTPTREQIKAMNPNYTEFKF- 243
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 227 gPHKQPsLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDE 277
Cdd:cd14137   244 -PQIKP-HPWEKVFPKRTPPDAIDLLSKILVYNPSKRLTALEALAHPFFDE 292
STKc_p38delta cd07879
Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase ...
2-334 1.37e-75

Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase (also called MAPK13); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38delta/MAPK13 is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. p38 kinases are MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143384 [Multi-domain]  Cd Length: 342  Bit Score: 237.49  E-value: 1.37e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQP-PHIDYFEEIYVVTELMQSDLHKIIvs 80
Cdd:cd07879    33 SAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSaVSGDEFQDFYLVMPYMQTDLQKIM-- 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDesrhMTQEVVTQYYRAPEIL 160
Cdd:cd07879   111 GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVI 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLE-AMRTACEGAKAHIL---RGPHKQPSlpv 236
Cdd:cd07879   187 LNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEfVQKLEDKAAKSYIKslpKYPRKDFS--- 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 237 lyTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRlryhtcmckccfststgrvyTSDFEPVTNPkFDDTFE 316
Cdd:cd07879   264 --TLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR--------------------DADEETEQQP-YDDSLE 320
                         330
                  ....*....|....*...
gi 1907080392 317 KNLSSVRQVKEIIHQFIL 334
Cdd:cd07879   321 NEKLSVDEWKKHIYKEVK 338
STKc_CDK1_CdkB_like cd07835
Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of ...
5-275 5.94e-74

Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK, CDK2, and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270829 [Multi-domain]  Cd Length: 283  Bit Score: 231.03  E-value: 5.94e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKM---------PNVfqnlvsckrVFRELKMLCFFKHDNVLSALDILqppHIDYfeEIYVVTELMQSDLH 75
Cdd:cd07835    20 DKLTGEIVALKKIrletedegvPST---------AIREISLLKELNHPNIVRLLDVV---HSEN--KLYLVFEFLDLDLK 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KII--VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQY 153
Cdd:cd07835    86 KYMdsSPLTGLDPPLIKSYLYQLLQGIAFCHSHRVLHRDLKPQNLLIDTEGALKLADFGLARAFGV-PVRTYTHEVVTLW 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 YRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSlEAMRTACEGAkahilrgPHKQPS 233
Cdd:cd07835   165 YRAPEILLGSKHYSTPVDIWSVGCIFAEMVTRRPLFPGDSEIDQLFRIFRTLGTPD-EDVWPGVTSL-------PDYKPT 236
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 234 LP---------VLYTLSsqatHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07835   237 FPkwarqdlskVVPSLD----EDGLDLLSQMLVYDPAKRISAKAALQHPYF 283
STKc_MAK_like cd07830
Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs ...
9-275 8.38e-73

Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia, suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270824 [Multi-domain]  Cd Length: 283  Bit Score: 228.19  E-value: 8.38e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVfRELKMLCFFK-HDNVLSALDIlqpphIDYFEEIYVVTELMQSDLHKIIVS--PQPLS 85
Cdd:cd07830    24 GELVAIKKMKKKFYSWEECMNL-REVKSLRKLNeHPNIVKLKEV-----FRENDELYFVFEYMEGNLYQLMKDrkGKPFS 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  86 SDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILMGSRH 165
Cdd:cd07830    98 ESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAR--EIRSRPPYTDYVSTRWYRAPEILLRSTS 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLpvLYTLSSQAT 245
Cdd:cd07830   176 YSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS--LHQLIPNAS 253
                         250       260       270
                  ....*....|....*....|....*....|
gi 1907080392 246 HEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07830   254 PEAIDLIKDMLRWDPKKRPTASQALQHPYF 283
STKc_MAPK4_6 cd07854
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also ...
1-275 8.52e-73

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK4 (also called ERK4 or p63MAPK) and MAPK6 (also called ERK3 or p97MAPK) are atypical MAPKs that are not regulated by MAPK kinases. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143359 [Multi-domain]  Cd Length: 342  Bit Score: 230.05  E-value: 8.52e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   1 MSVTDPRDGKRVALKKMpnVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID---------YFEEIYVVTELMQ 71
Cdd:cd07854    22 FSAVDSDCDKRVAVKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDltedvgsltELNSVYIVQEYME 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  72 SDLHKIIvSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS-NCVLKICDFGLARVEELDESR--HMTQE 148
Cdd:cd07854   100 TDLANVL-EQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTeDLVLKIGDFGLARIVDPHYSHkgYLSEG 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 149 VVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSlEAMRTACEGAKAHILRGP 228
Cdd:cd07854   179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR-EEDRNELLNVIPSFVRND 257
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1907080392 229 HKQPSLPvLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07854   258 GGEPRRP-LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303
STKc_CDC2L1 cd07843
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze ...
5-274 2.14e-72

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173741 [Multi-domain]  Cd Length: 293  Bit Score: 227.49  E-value: 2.14e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALK--KMPNVFQN--LVSckrvFRELKMLCFFKHDNVLSALDILQPPHIDyfeEIYVVTELMQSDLHKII-V 79
Cdd:cd07843    26 DKKTGEIVALKklKMEKEKEGfpITS----LREINILLKLQHPNIVTVKEVVVGSNLD---KIYMVMEYVEHDLKSLMeT 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEI 159
Cdd:cd07843    99 MKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAR-EYGSPLKPYTQLVVTLWYRAPEL 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP---------SLEAMRtacegaKAHILRGPHK 230
Cdd:cd07843   178 LLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPtekiwpgfsELPGAK------KKTFTKYPYN 251
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1907080392 231 QPS--LPVLytlssQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07843   252 QLRkkFPAL-----SLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292
STKc_CCRK cd07832
Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the ...
9-275 6.17e-72

Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed; this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270826 [Multi-domain]  Cd Length: 287  Bit Score: 226.06  E-value: 6.17e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK-HDNVLSALDILqpPHIdyfEEIYVVTELMQSDLHKIIV-SPQPLSS 86
Cdd:cd07832    25 GETVALKKVALRKLEGGIPNQALREIKALQACQgHPYVVKLRDVF--PHG---TGFVLVFEYMLSSLSEVLRdEERPLTE 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHY 166
Cdd:cd07832   100 AQVKRYMRMLLKGVAYMHANRIMHRDLKPANLLISSTGVLKIADFGLARLFSEEDPRLYSHQVATRWYRAPELLYGSRKY 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLpvLYTLSSQATH 246
Cdd:cd07832   180 DEGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVLRTLGTPNEKTWPELTSLPDYNKITFPESKGIR--LEEIFPDCSP 257
                         250       260
                  ....*....|....*....|....*....
gi 1907080392 247 EAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07832   258 EAIDLLKGLLVYNPKKRLSAEEALRHPYF 286
STKc_CMGC cd05118
Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
5-275 9.50e-72

Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and other kinases. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Other members of the CMGC family include casein kinase 2 (CK2), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK), Glycogen Synthase Kinase 3 (GSK3), among many others. The CMGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270688 [Multi-domain]  Cd Length: 249  Bit Score: 224.42  E-value: 9.50e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNlvsCKRVFRELKMLCFFK----HDNVLSALDILQPPHIDYfeeIYVVTELMQSDLHKII-V 79
Cdd:cd05118    20 DKVTGEKVAIKKIKNDFRH---PKAALREIKLLKHLNdvegHPNIVKLLDVFEHRGGNH---LCLVFELMGMNLYELIkD 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKICDFGLARVeelDESRHMTQEVVTQYYRAPE 158
Cdd:cd05118    94 YPRGLPLDLIKSYLYQLLQALDFLHSNGIIHRDLKPENILINlELGQLKLADFGLARS---FTSPPYTPYVATRWYRAPE 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPsleamrtacegakahilrgphkqpslpvly 238
Cdd:cd05118   171 VLLGAKPYGSSIDIWSLGCILAELLTGRPLFPGDSEVDQLAKIVRLLGTP------------------------------ 220
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1907080392 239 tlssqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd05118   221 --------EALDLLSKMLKYDPAKRITASQALAHPYF 249
STKc_CDK4_6_like cd07838
Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; ...
3-275 3.92e-69

Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinases activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270831 [Multi-domain]  Cd Length: 287  Bit Score: 219.07  E-value: 3.92e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKK--MPNVFQNL-VSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKII- 78
Cdd:cd07838    18 ARDLQDGRFVALKKvrVPLSEEGIpLSTIREIALLKQLESFEHPNVVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLd 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 -VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhmTQEVVTQYYRAP 157
Cdd:cd07838    98 kCPKPGLPPETIKDLMRQLLRGLDFLHSHRIVHRDLKPQNILVTSDGQVKLADFGLARIYSFEMAL--TSVVVTLWYRAP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMGSrHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVL 237
Cdd:cd07838   176 EVLLQS-SYATPVDMWSVGCIFAELFNRRPLFRGSSEADQLGKIFDVIGLPSEEEWPRNSALPRSSFPSYTPRPFKSFVP 254
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 238 ytlssQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07838   255 -----EIDEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287
STKc_CDK10 cd07845
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs ...
5-277 5.01e-68

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173742 [Multi-domain]  Cd Length: 309  Bit Score: 216.85  E-value: 5.01e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKK--MPNVFQNL-VSCkrvFRELKMLCFFKHDNVLSALDILQPPHIDyfeEIYVVTELMQSDLHKIIVS- 80
Cdd:cd07845    28 DTTSGEIVALKKvrMDNERDGIpISS---LREITLLLNLRHPNIVELKEVVVGKHLD---SIFLVMEYCEQDLASLLDNm 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEElDESRHMTQEVVTQYYRAPEIL 160
Cdd:cd07845   102 PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG-LPAKPMTPKVVTLWYRAPELL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS---LEAMRtACEGAKAHILRgphKQP--SLP 235
Cdd:cd07845   181 LGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNesiWPGFS-DLPLVGKFTLP---KQPynNLK 256
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 236 VLYTLSSQAtheAVHLLCRMLVFDPSKRISAKDALAHPYLDE 277
Cdd:cd07845   257 HKFPWLSEA---GLRLLNFLLMYDPKKRATAEEALESSYFKE 295
STKc_BUR1 cd07866
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), ...
7-274 3.32e-66

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), Bypass UAS Requirement 1, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BUR1, also called SGV1, is a yeast CDK that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270849 [Multi-domain]  Cd Length: 311  Bit Score: 212.17  E-value: 3.32e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMpnvfqnLVSCKR------VFRELKMLCFFKHDNVLSALD-ILQPPHIDYFE--EIYVVTELMQSDLHKI 77
Cdd:cd07866    31 KTGRVVALKKI------LMHNEKdgfpitALREIKILKKLKHPNVVPLIDmAVERPDKSKRKrgSVYMVTPYMDHDLSGL 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDE----------SRHMT 146
Cdd:cd07866   105 LENPSvKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPpnpkggggggTRKYT 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 147 QEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR--TACEGAKAHI 224
Cdd:cd07866   185 NLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPgwRSLPGCEGVH 264
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1907080392 225 LRGPHKqpslPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07866   265 SFTNYP----RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310
STKc_JNK2 cd07876
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the ...
9-275 5.38e-63

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK2 is expressed in every cell and tissue type. It is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143381 [Multi-domain]  Cd Length: 359  Bit Score: 205.65  E-value: 5.38e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH-IDYFEEIYVVTELMQSDLHKIIvsPQPLSSD 87
Cdd:cd07876    46 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKsLEEFQDVYLVMELMDANLCQVI--HMELDHE 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDesRHMTQEVVTQYYRAPEILMGSRHYS 167
Cdd:cd07876   124 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVILGMGYKE 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NaIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQP----------SLPVL 237
Cdd:cd07876   202 N-VDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGisfeelfpdwIFPSE 280
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 238 YTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07876   281 SERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318
PTZ00024 PTZ00024
cyclin-dependent protein kinase; Provisional
5-274 5.46e-63

cyclin-dependent protein kinase; Provisional


Pssm-ID: 240233 [Multi-domain]  Cd Length: 335  Bit Score: 204.61  E-value: 5.46e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNV-FQNLVSCKR-----------VFRELKMLCFFKHDNVLSALDIlqpphidYFEE--IYVVTELM 70
Cdd:PTZ00024   30 DTLTGKIVAIKKVKIIeISNDVTKDRqlvgmcgihftTLRELKIMNEIKHENIMGLVDV-------YVEGdfINLVMDIM 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  71 QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-------------VE 137
Cdd:PTZ00024  103 ASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARrygyppysdtlskDE 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 138 ELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSleamRTAC 217
Cdd:PTZ00024  183 TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPN----EDNW 258
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 218 EGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:PTZ00024  259 PQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315
STKc_CDK2_3 cd07860
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; ...
5-274 7.58e-63

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270844 [Multi-domain]  Cd Length: 284  Bit Score: 202.73  E-value: 7.58e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKI--IVSPQ 82
Cdd:cd07860    21 NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKLYLVFEFLHQDLKKFmdASALT 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMG 162
Cdd:cd07860    96 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 163 SRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSleamrtacEGAKAHILRGPHKQPSLP------- 235
Cdd:cd07860   175 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD--------EVVWPGVTSMPDYKPSFPkwarqdf 246
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 236 --VLYTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07860   247 skVVPPLDE----DGRDLLSQMLHYDPNKRISAKAALAHPF 283
STKc_JNK3 cd07874
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the ...
10-276 1.37e-61

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in JNK3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143379 [Multi-domain]  Cd Length: 355  Bit Score: 201.86  E-value: 1.37e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH-IDYFEEIYVVTELMQSDLHKIIvsPQPLSSDH 88
Cdd:cd07874    43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKsLEEFQDVYLVMELMDANLCQVI--QMELDHER 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEelDESRHMTQEVVTQYYRAPEILMGSRHYSN 168
Cdd:cd07874   121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 169 aIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGP-HKQPSLPVLYTLS---SQA 244
Cdd:cd07874   199 -VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPkYAGLTFPKLFPDSlfpADS 277
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 245 TH------EAVHLLCRMLVFDPSKRISAKDALAHPYLD 276
Cdd:cd07874   278 EHnklkasQARDLLSKMLVIDPAKRISVDEALQHPYIN 315
PLN00009 PLN00009
cyclin-dependent kinase A; Provisional
32-282 8.99e-61

cyclin-dependent kinase A; Provisional


Pssm-ID: 177649 [Multi-domain]  Cd Length: 294  Bit Score: 197.73  E-value: 8.99e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILqppHIDyfEEIYVVTELMQSDLHKIIVSPQPLSSDH--VKVFLYQILRGLKYLHSAGIL 109
Cdd:PLN00009   50 REISLLKEMQHGNIVRLQDVV---HSE--KRLYLVFEYLDLDLKKHMDSSPDFAKNPrlIKTYLYQILRGIAYCHSHRVL 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 110 HRDIKPGNLLVN-SNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRIL 188
Cdd:PLN00009  125 HRDLKPQNLLIDrRTNALKLADFGLARAFGI-PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPL 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 189 FQAQSPIQQLDLITDLLGTPSlEAMRTACEGAKAHILRGPHKQPSlpVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKD 268
Cdd:PLN00009  204 FPGDSEIDELFKIFRILGTPN-EETWPGVTSLPDYKSAFPKWPPK--DLATVVPTLEPAGVDLLSKMLRLDPSKRITARA 280
                         250
                  ....*....|....
gi 1907080392 269 ALAHPYLDEGRLRY 282
Cdd:PLN00009  281 ALEHEYFKDLGDAP 294
STKc_CDK8_like cd07842
Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs ...
5-274 2.66e-60

Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270834 [Multi-domain]  Cd Length: 316  Bit Score: 197.12  E-value: 2.66e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKM--PNVFQNLVSCKRVfRELKMLCFFKHDNVLSaldiLQPPHIDYFE-EIYVVTELMQSDLHKII--- 78
Cdd:cd07842    23 NGKDGKEYAIKKFkgDKEQYTGISQSAC-REIALLRELKHENVVS----LVEVFLEHADkSVYLLFDYAEHDLWQIIkfh 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC----VLKICDFGLARV--EELDESRHMTQEVV 150
Cdd:cd07842    98 RQAKrvSIPPSMVKSLLWQILNGIHYLHSNWVLHRDLKPANILVMGEGpergVVKIGDLGLARLfnAPLKPLADLDPVVV 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 151 TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQ-------AQSPIQ--QLDLITDLLGTPSLEA---MRTACE 218
Cdd:cd07842   178 TIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKgreakikKSNPFQrdQLERIFEVLGTPTEKDwpdIKKMPE 257
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 219 --GAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07842   258 ydTLKSDTKASTYPNSLLAKWMHKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315
STKc_CdkB_plant cd07837
Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; ...
5-276 5.86e-60

Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270830 [Multi-domain]  Cd Length: 294  Bit Score: 195.44  E-value: 5.86e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALdiLQPPHIDYFEE--IYVVTELMQSDLHKIIVS-- 80
Cdd:cd07837    22 DKNTGKLVALKKTRLEMEEEGVPSTALREVSLLQMLSQSIYIVRL--LDVEHVEENGKplLYLVFEYLDTDLKKFIDSyg 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 ---PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKICDFGLARVEELDESRHmTQEVVTQYYRA 156
Cdd:cd07837   100 rgpHNPLPAKTIQSFMYQLCKGVAHCHSHGVMHRDLKPQNLLVDkQKGLLKIADLGLGRAFTIPIKSY-THEIVTLWYRA 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 157 PEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMrtacEGAKAhiLRGPHKQPSLPV 236
Cdd:cd07837   179 PEVLLGSTHYSTPVDMWSVGCIFAEMSRKQPLFPGDSELQQLLHIFRLLGTPNEEVW----PGVSK--LRDWHEYPQWKP 252
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 237 --LYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLD 276
Cdd:cd07837   253 qdLSRAVPDLEPEGVDLLTKMLAYDPAKRISAKAALQHPYFD 294
STKc_JNK1 cd07875
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the ...
10-276 1.10e-59

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK1 is expressed in every cell and tissue type. It specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in JNK1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Initially, it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143380 [Multi-domain]  Cd Length: 364  Bit Score: 197.19  E-value: 1.10e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQP-PHIDYFEEIYVVTELMQSDLHKIIvsPQPLSSDH 88
Cdd:cd07875    50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPqKSLEEFQDVYIVMELMDANLCQVI--QMELDHER 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEelDESRHMTQEVVTQYYRAPEILMGSRHYSN 168
Cdd:cd07875   128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 169 aIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHK-----QPSLP-VLYTLSS 242
Cdd:cd07875   206 -VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYagysfEKLFPdVLFPADS 284
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 243 Q----ATHEAVHLLCRMLVFDPSKRISAKDALAHPYLD 276
Cdd:cd07875   285 EhnklKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
STKc_PCTAIRE_like cd07844
Catalytic domain of PCTAIRE-like Serine/Threonine Kinases; STKs catalyze the transfer of the ...
9-275 1.71e-59

Catalytic domain of PCTAIRE-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. They share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270835 [Multi-domain]  Cd Length: 286  Bit Score: 194.14  E-value: 1.71e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVfRELKMLCFFKHDNVLSALDILqppHIDyfEEIYVVTELMQSDLHKIIVS-PQPLSSD 87
Cdd:cd07844    25 GQLVALKEIRLEHEEGAPFTAI-REASLLKDLKHANIVTLHDII---HTK--KTLTLVFEYLDTDLKQYMDDcGGGLSMH 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYS 167
Cdd:cd07844    99 NVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSV-PSKTYSNEVVTLWYRPPDVLLGSTEYS 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NAIDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQP-----SLPVLYTLS 241
Cdd:cd07844   178 TSLDMWGVGCIFYEMATGRPLFPGSTDVEdQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPrplinHAPRLDRIP 257
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1907080392 242 sqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07844   258 -----HGEELALKFLQYEPKKRISAAEAMKHPYF 286
STKc_CDK1_euk cd07861
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher ...
7-275 3.81e-59

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis as well as neuronal apoptosis in neurodegenerative diseases. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270845 [Multi-domain]  Cd Length: 285  Bit Score: 193.02  E-value: 3.81e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQSDLHK---IIVSPQP 83
Cdd:cd07861    23 KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLEDVLMQEN-----RLYLVFEFLSMDLKKyldSLPKGKY 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGS 163
Cdd:cd07861    98 MDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI-PVRVYTHEVVTLWYRAPEVLLGS 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 164 RHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSleamrtacEGAKAHILRGPHKQPSLP-----VLY 238
Cdd:cd07861   177 PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPT--------EDIWPGVTSLPDYKNTFPkwkkgSLR 248
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1907080392 239 TLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07861   249 TAVKNLDEDGLDLLEKMLIYDPAKRISAKKALVHPYF 285
STKc_Pho85 cd07836
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; ...
32-274 5.06e-58

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Pho85 is a multifunctional CDK in yeast. It is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143341 [Multi-domain]  Cd Length: 284  Bit Score: 190.00  E-value: 5.06e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSAGI 108
Cdd:cd07836    47 REISLMKELKHENIVRLHDVIHTE-----NKLMLVFEYMDKDLKKYMDThgvRGALDPNTVKSFTYQLLKGIAFCHENRV 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 109 LHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRIL 188
Cdd:cd07836   122 LHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT-FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPL 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 189 FQAQSPIQQLDLITDLLGTPSleamrtacEGAKAHILRGPHKQPSLPV-----LYTLSSQATHEAVHLLCRMLVFDPSKR 263
Cdd:cd07836   201 FPGTNNEDQLLKIFRIMGTPT--------ESTWPGISQLPEYKPTFPRyppqdLQQLFPHADPLGIDLLHRLLQLNPELR 272
                         250
                  ....*....|.
gi 1907080392 264 ISAKDALAHPY 274
Cdd:cd07836   273 ISAHDALQHPW 283
STKc_CDKL cd07833
Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs ...
9-275 2.30e-57

Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270827 [Multi-domain]  Cd Length: 288  Bit Score: 188.68  E-value: 2.30e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKII-VSPQPLSSD 87
Cdd:cd07833    26 GEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK-----GRLYLVFEYVERTLLELLeASPGGLPPD 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYS 167
Cdd:cd07833   101 AVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALTARPASPLTDYVATRWYRAPELLVGDTNYG 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATHE 247
Cdd:cd07833   181 KPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSP 260
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 248 AVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07833   261 ALDFLKACLRMDPKERLTCDELLQHPYF 288
STKc_CDK12 cd07864
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs ...
5-275 1.07e-56

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an RS domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270847 [Multi-domain]  Cd Length: 302  Bit Score: 187.32  E-value: 1.07e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMpnvfqNLVSCKRVF-----RELKMLCFFKHDNVLSALDIL--QPPHIDYFEE---IYVVTELMQSDL 74
Cdd:cd07864    28 DKDTGELVALKKV-----RLDNEKEGFpitaiREIKILRQLNHRSVVNLKEIVtdKQDALDFKKDkgaFYLVFEYMDHDL 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQY 153
Cdd:cd07864   103 MGLLESGLvHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLW 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 YRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPsleamrtaCEGAKAHILRgphkqps 233
Cdd:cd07864   183 YRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP--------CPAVWPDVIK------- 247
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1907080392 234 LPVLYTLSSQATH-------------EAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07864   248 LPYFNTMKPKKQYrrrlreefsfiptPALDLLDHMLTLDPSKRCTAEQALNSPWL 302
STKc_MOK cd07831
Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs ...
7-274 3.83e-54

Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270825 [Multi-domain]  Cd Length: 282  Bit Score: 180.16  E-value: 3.83e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNVFQNLvSCKRVFRE---LKMLCffKHDNVLSALDILqpphidyFEEIY----VVTELMQSDLHKIIV 79
Cdd:cd07831    22 KTGKYYAIKCMKKHFKSL-EQVNNLREiqaLRRLS--PHPNILRLIEVL-------FDRKTgrlaLVFELMDMNLYELIK 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 S-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCvLKICDFGLARveELDESRHMTQEVVTQYYRAPE 158
Cdd:cd07831    92 GrKRPLPEKRVKNYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDI-LKLADFGSCR--GIYSKPPYTEYISTRWYRAPE 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHIlRGPHKQPS-LPVL 237
Cdd:cd07831   169 CLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY-NFPSKKGTgLRKL 247
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1907080392 238 YTLssqATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07831   248 LPN---ASAEGLDLLKKLLAYDPDERITAKQALRHPY 281
STKc_PCTAIRE3 cd07871
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer ...
12-275 1.03e-53

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles. In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270853 [Multi-domain]  Cd Length: 288  Bit Score: 179.05  E-value: 1.03e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNVFQNLVSCKRVfRELKMLCFFKHDNVLSALDILqppHIDYfeEIYVVTELMQSDLHKIIVSPQPLSSDH-VK 90
Cdd:cd07871    33 VALKEIRLEHEEGAPCTAI-REVSLLKNLKHANIVTLHDII---HTER--CLTLVFEYLDSDLKQYLDNCGNLMSMHnVK 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYSNAI 170
Cdd:cd07871   107 IFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSTEYSTPI 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 171 DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR--TACEGAKAHILRGPHKQPslpvLYTLSSQATHEA 248
Cdd:cd07871   186 DMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPgvTSNEEFRSYLFPQYRAQP----LINHAPRLDTDG 261
                         250       260
                  ....*....|....*....|....*..
gi 1907080392 249 VHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07871   262 IDLLSSLLLYETKSRISAEAALRHSYF 288
STKc_CDK4 cd07863
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs ...
5-275 9.41e-53

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of TGF-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143368 [Multi-domain]  Cd Length: 288  Bit Score: 176.69  E-value: 9.41e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALK--KMPNVFQNL-VSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKII--V 79
Cdd:cd07863    21 DPHSGHFVALKsvRVQTNEDGLpLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLdkV 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeldESRHM--TQEVVTQYYRAP 157
Cdd:cd07863   101 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI----YSCQMalTPVVVTLWYRAP 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAK-AHILRGPhkQPSLPV 236
Cdd:cd07863   177 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRgAFSPRGP--RPVQSV 253
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1907080392 237 LytlsSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07863   254 V----PEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288
STKc_CDK9 cd07865
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs ...
9-274 8.38e-51

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK9, together with a cyclin partner (cyclin T1, T2a, T2b, or K), is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270848 [Multi-domain]  Cd Length: 310  Bit Score: 172.17  E-value: 8.38e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKK--MPNVfqnlvscKRVF-----RELKMLCFFKHDNVLSALDI---LQPPHIDYFEEIYVVTELMQSDLHKII 78
Cdd:cd07865    37 GQIVALKKvlMENE-------KEGFpitalREIKILQLLKHENVVNLIEIcrtKATPYNRYKGSIYLVFEFCEHDLAGLL 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV---EELDESRHMTQEVVTQYY 154
Cdd:cd07865   110 SNKNvKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGVLKLADFGLARAfslAKNSQPNRYTNRVVTLWY 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLG--TPSLEAMRTACEGAKAHILrgPHKQP 232
Cdd:cd07865   190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGsiTPEVWPGVDKLELFKKMEL--PQGQK 267
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 233 SLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07865   268 RKVKERLKPYVKDPYALDLIDKLLVLDPAKRIDADTALNHDF 309
STKc_PCTAIRE1 cd07873
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer ...
12-284 9.12e-51

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270854 [Multi-domain]  Cd Length: 297  Bit Score: 171.72  E-value: 9.12e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNVFQNLVSCKRVfRELKMLCFFKHDNVLSALDILqppHIDyfEEIYVVTELMQSDLHKIIVSPQPLSSDH-VK 90
Cdd:cd07873    30 VALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDII---HTE--KSLTLVFEYLDKDLKQYLDDCGNSINMHnVK 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYSNAI 170
Cdd:cd07873   104 LFLFQLLRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTYSNEVVTLWYRPPDILLGSTDYSTQI 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 171 DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSlpVLYTLSSQATHEAVH 250
Cdd:cd07873   183 DMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRAD--ALHNHAPRLDSDGAD 260
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1907080392 251 LLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHT 284
Cdd:cd07873   261 LLSKLLQFEGRKRISAEEAMKHPYFHSLGERIHK 294
STKc_PFTAIRE2 cd07870
Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer ...
32-275 6.03e-50

Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. It shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270852 [Multi-domain]  Cd Length: 286  Bit Score: 169.37  E-value: 6.03e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd07870    47 REASLLKGLKHANIVLLHDIIHTK-----ETLTFVFEYMHTDLAQYMIQhPGGLHPYNVRLFMFQLLRGLAYIHGQHILH 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQ 190
Cdd:cd07870   122 RDLKPQNLLISYLGELKLADFGLARAKSI-PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 191 AQSPI-QQLDLITDLLGTPSLEAMRTACE--GAKAHILRgPHKQPSLPVLYTLSSQAtHEAVHLLCRMLVFDPSKRISAK 267
Cdd:cd07870   201 GVSDVfEQLEKIWTVLGVPTEDTWPGVSKlpNYKPEWFL-PCKPQQLRVVWKRLSRP-PKAEDLASQMLMMFPKDRISAQ 278

                  ....*...
gi 1907080392 268 DALAHPYL 275
Cdd:cd07870   279 DALLHPYF 286
STKc_CDK5 cd07839
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs ...
31-274 1.81e-49

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143344 [Multi-domain]  Cd Length: 284  Bit Score: 168.00  E-value: 1.81e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  31 FRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGIL 109
Cdd:cd07839    47 LREICLLKELKHKNIVRLYDVLHSDK-----KLTLVFEYCDQDLKKYFDSCNgDIDPEIVKSFMFQLLKGLAFCHSHNVL 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 110 HRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELL-GRRIL 188
Cdd:cd07839   122 HRDLKPQNLLINKNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAnAGRPL 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 189 FQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILrgPHkQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKD 268
Cdd:cd07839   201 FPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY--PM-YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE 277

                  ....*.
gi 1907080392 269 ALAHPY 274
Cdd:cd07839   278 ALQHPY 283
STKc_PCTAIRE2 cd07872
Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase; STKs catalyze the transfer ...
12-284 1.01e-48

Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143377 [Multi-domain]  Cd Length: 309  Bit Score: 166.71  E-value: 1.01e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNVFQNLVSCKRVfRELKMLCFFKHDNVLSALDILqppHIDyfEEIYVVTELMQSDLHKIIVSPQPLSSDH-VK 90
Cdd:cd07872    34 VALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDIV---HTD--KSLTLVFEYLDKDLKQYMDDCGNIMSMHnVK 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYSNAI 170
Cdd:cd07872   108 IFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSSEYSTQI 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 171 DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSlpVLYTLSSQATHEAVH 250
Cdd:cd07872   187 DMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQ--PLINHAPRLDTEGIE 264
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1907080392 251 LLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHT 284
Cdd:cd07872   265 LLTKFLQYESKKRISAEEAMKHAYFRSLGTRIHS 298
PKc cd00180
Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group ...
3-273 8.74e-47

Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. PKs make up a large family of serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and more than 500 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase.


Pssm-ID: 270622 [Multi-domain]  Cd Length: 215  Bit Score: 158.59  E-value: 8.74e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVfQNLVSCKRVFRELKMLCFFKHDNVLSALDILQpphidYFEEIYVVTELMQS-DLHKIIVS- 80
Cdd:cd00180    12 ARDKETGKKVAVKVIPKE-KLKKLLEELLREIEILKKLNHPNIVKLYDVFE-----TENFLYLVMEYCEGgSLKDLLKEn 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEIL 160
Cdd:cd00180    86 KGPLSEEEALSILRQLLSALEYLHSNGIIHRDLKPENILLDSDGTVKLADFGLAKDLDSDDSLLKTTGGTTPPYYAPPEL 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIfaellgrrilfqaqspiqqldlitdllgtpsleamrtacegakahilrgphkqpslpvLYTL 240
Cdd:cd00180   166 LGGRYYGPKVDIWSLGVI----------------------------------------------------------LYEL 187
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 241 SsqathEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd00180   188 E-----ELKDLIRRMLQYDPKKRPSAKELLEHL 215
STKc_CAMK cd05117
The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of ...
3-273 2.82e-46

The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. CAMKIV is implicated in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors, as well as in T-cell development and signaling. The CAMK family also consists of other related kinases including the Phosphorylase kinase Gamma subunit (PhKG), the C-terminal kinase domains of Ribosomal S6 kinase (RSK) and Mitogen and stress-activated kinase (MSK), Doublecortin-like kinase (DCKL), and the MAPK-activated protein kinases MK2, MK3, and MK5, among others. The CAMK family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270687 [Multi-domain]  Cd Length: 258  Bit Score: 158.79  E-value: 2.82e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSAldilqpphIDYFEE---IYVVTELMQS-DLHKII 78
Cdd:cd05117    19 AVHKKTGEEYAVKIIDKKKLKSEDEEMLRREIEILKRLDHPNIVKL--------YEVFEDdknLYLVMELCTGgELFDRI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARveELDESRHMTQEVVTQYYR 155
Cdd:cd05117    91 VKKGSFSEREAAKIMKQILSAVAYLHSQGIVHRDLKPENILLASkdpDSPIKIIDFGLAK--IFEEGEKLKTVCGTPYYV 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 156 APEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLItdllgtpsleamrtaCEGAkahilrgphkqpslp 235
Cdd:cd05117   169 APEVLKGKG-YGKKCDIWSLGVILYILLCGYPPFYGETEQELFEKI---------------LKGK--------------- 217
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 236 vlYTLSSQA----THEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd05117   218 --YSFDSPEwknvSEEAKDLIKRLLVVDPKKRLTAAEALNHP 257
STKc_CK2_alpha cd14132
Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2; STKs catalyze the ...
7-276 1.65e-44

Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CK2 is a tetrameric protein with two catalytic (alpha) and two regulatory (beta) subunits. It is constitutively active and ubiquitously expressed, and is found in the cytoplasm, nucleus, as well as in the plasma membrane. It phosphorylates a wide variety of substrates including gylcogen synthase, cell cycle proteins, nuclear proteins (e.g. DNA topoisomerase II), and ion channels (e.g. ENaC), among others. It may be considered a master kinase controlling the activity or lifespan of many other kinases and exerting its effect over cell fate, gene expression, protein synthesis and degradation, and viral infection. CK2 is implicated in every stage of the cell cycle and is required for cell cycle progression. It plays crucial roles in cell differentiation, proliferation, and survival, and is thus implicated in cancer. CK2 is not an oncogene by itself but elevated CK2 levels create an environment that enhances the survival of tumor cells. The CK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271034 [Multi-domain]  Cd Length: 306  Bit Score: 155.39  E-value: 1.65e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNVFQnlvscKRVFRELKMLCFFK-HDNVLSALDILQPPHidyfEEIYV-VTELMQS-DLHKIIvspQP 83
Cdd:cd14132    41 GNNEKVVIKVLKPVKK-----KKIKREIKILQNLRgGPNIVKLLDVVKDPQ----SKTPSlIFEYVNNtDFKTLY---PT 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC-VLKICDFGLArveeldESRHMTQE----VVTQYYRAPE 158
Cdd:cd14132   109 LTDYDIRYYMYELLKALDYCHSKGIMHRDVKPHNIMIDHEKrKLRLIDWGLA------EFYHPGQEynvrVASRYYKGPE 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGSRHYSNAIDIWSVGCIFAELLGRRI-LFQAQSPIQQLDLITDLLGTPSLEAMrtaCE------GAKAHILRGPHKQ 231
Cdd:cd14132   183 LLVDYQYYDYSLDMWSLGCMLASMIFRKEpFFHGHDNYDQLVKIAKVLGTDDLYAY---LDkygielPPRLNDILGRHSK 259
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1907080392 232 PSLPVLYTLSSQ--ATHEAVHLLCRMLVFDPSKRISAKDALAHPYLD 276
Cdd:cd14132   260 KPWERFVNSENQhlVTPEALDLLDKLLRYDHQERITAKEAMQHPYFD 306
STKc_PknB_like cd14014
Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs ...
3-271 5.19e-44

Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270916 [Multi-domain]  Cd Length: 260  Bit Score: 152.74  E-value: 5.19e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKM-PNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIdyfeeIYVVTELMQS-DLHKIIVS 80
Cdd:cd14014    19 ARDTLLGRPVAIKVLrPELAEDEEFRERFLREARALARLSHPNIVRVYDVGEDDGR-----PYIVMEYVEGgSLADLLRE 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEIL 160
Cdd:cd14014    94 RGPLPPREALRILAQIADALAAAHRAGIVHRDIKPANILLTEDGRVKLTDFGIARALGDSGLTQTGSVLGTPAYMAPEQA 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgtpsleamrtacegakAHILRGPHKQPSLPVLYTl 240
Cdd:cd14014   174 RGGP-VDPRSDIYSLGVVLYELLTGRPPFDGDSPAAVL-----------------------AKHLQEAPPPPSPLNPDV- 228
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1907080392 241 sSQATHEAVHllcRMLVFDPSKRISAKDALA 271
Cdd:cd14014   229 -PPALDAIIL---RALAKDPEERPQSAAELL 255
STKc_CDK6 cd07862
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs ...
5-274 5.60e-43

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270846 [Multi-domain]  Cd Length: 290  Bit Score: 151.34  E-value: 5.60e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKR-VALKK---------MPnvfqnlVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDL 74
Cdd:cd07862    22 DLKNGGRfVALKRvrvqtgeegMP------LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDL 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKII-VSPQP-LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESrhMTQEVVTQ 152
Cdd:cd07862    96 TTYLdKVPEPgVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 153 YYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPhKQP 232
Cdd:cd07862   174 WYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS-AQP 251
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 233 slpvLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07862   252 ----IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289
PKc_STE cd05122
Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the ...
3-275 1.45e-42

Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPKK kinases (MAPKKKs), or MAPKKK kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. The STE family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270692 [Multi-domain]  Cd Length: 254  Bit Score: 148.89  E-value: 1.45e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMpnvfqNLVSCKR---VFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQ----SDLH 75
Cdd:cd05122    19 ARHKKTGQIVAIKKI-----NLESKEKkesILNEIAILKKCKHPNIVKYYGSYLKK-----DELWIVMEFCSggslKDLL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KiiVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMtqeVVTQYY 154
Cdd:cd05122    89 K--NTNKTLTEQQIAYVCKEVLKGLEYLHSHGIIHRDIKAANILLTSDGEVKLIDFGLSaQLSDGKTRNTF---VGTPYW 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMGSrHYSNAIDIWSVGCIFAELLGRRIlfqaqsPIQQLdlitdllgtPSLEAMrtacegakAHILRGPHkqPSL 234
Cdd:cd05122   164 MAPEVIQGK-PYGFKADIWSLGITAIEMAEGKP------PYSEL---------PPMKAL--------FLIATNGP--PGL 217
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 235 PVlytlSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd05122   218 RN----PKKWSKEFKDFLKKCLQKDPEKRPTAEQLLKHPFI 254
STKc_CDKL2_3 cd07846
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; ...
9-274 5.70e-42

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270836 [Multi-domain]  Cd Length: 286  Bit Score: 148.34  E-value: 5.70e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELM-QSDLHKIIVSPQPLSSD 87
Cdd:cd07846    26 GQIVAIKKFLESEDDKMVKKIAMREIKMLKQLRHENLVNLIEVFRRK-----KRWYLVFEFVdHTVLDDLEKYPNGLDES 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESrhMTQEVVTQYYRAPEILMGSRHY 166
Cdd:cd07846   101 RVRKYLFQILRGIDFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARtLAAPGEV--YTDYVATRWYRAPELLVGDTKY 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPvLYTLSSQATH 246
Cdd:cd07846   179 GKAVDVWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQELFQKNPLFAGVRLPEVKEVEP-LERRYPKLSG 257
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 247 EAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07846   258 VVIDLAKKCLHIDPDKRPSCSELLHHEF 285
STKc_CDKL5 cd07848
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5; STKs ...
12-273 5.12e-41

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270838 [Multi-domain]  Cd Length: 287  Bit Score: 145.91  E-value: 5.12e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQSDLHKIIVS-PQPLSSDHVK 90
Cdd:cd07848    29 VAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-----KLYLVFEYVEKNMLELLEEmPNGVPPEKVR 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAI 170
Cdd:cd07848   104 SYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP-YGKAV 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 171 DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGP---HKQpSLPVLY--TLSSQat 245
Cdd:cd07848   183 DMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPavnHPQ-SLERRYlgILSGV-- 259
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 246 heAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd07848   260 --LLDLMKNLLKLNPTDRYLTEQCLNHP 285
STKc_PFTAIRE1 cd07869
Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase; STKs catalyze the transfer ...
32-277 5.18e-41

Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143374 [Multi-domain]  Cd Length: 303  Bit Score: 146.38  E-value: 5.18e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKII-VSPQPLSSDHVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd07869    52 REASLLKGLKHANIVLLHDIIHTK-----ETLTLVFEYVHTDLCQYMdKHPGGLHPENVKLFLFQLLRGLSYIHQRYILH 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNCVLKICDFGLARVEELdESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQ 190
Cdd:cd07869   127 RDLKPQNLLISDTGELKLADFGLARAKSV-PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFP 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 191 AQSPIQ-QLDLITDLLGTPSLEAMrtacegAKAHILrgPHKQPSLPVLYTLSS--QA------THEAVHLLCRMLVFDPS 261
Cdd:cd07869   206 GMKDIQdQLERIFLVLGTPNEDTW------PGVHSL--PHFKPERFTLYSPKNlrQAwnklsyVNHAEDLASKLLQCFPK 277
                         250
                  ....*....|....*.
gi 1907080392 262 KRISAKDALAHPYLDE 277
Cdd:cd07869   278 NRLSAQAALSHEYFSD 293
PKc_DYRK_like cd14133
Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like ...
57-275 6.32e-41

Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like protein kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity DYRKs and YAK1, as well as the S/T kinases (STKs), HIPKs. DYRKs and YAK1 autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. Proteins in this subfamily play important roles in cell proliferation, differentiation, survival, growth, and development. The DYRK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271035 [Multi-domain]  Cd Length: 262  Bit Score: 144.72  E-value: 6.32e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  57 IDYF---EEIYVVTELMQSDLHKII--VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV--NSNCVLKIC 129
Cdd:cd14133    67 KDVFyfkNHLCIVFELLSQNLYEFLkqNKFQYLSLPRIRKIAQQILEALVFLHSLGLIHCDLKPENILLasYSRCQIKII 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 130 DFGLArveeLDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS 209
Cdd:cd14133   147 DFGSS----CFLTQRLYSYIQSRYYRAPEVILGLP-YDEKIDMWSLGCILAELYTGEPLFPGASEVDQLARIIGTIGIPP 221
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 210 leamrtacegakAHIL-RGPHKQPSLpvlytlssqatheaVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14133   222 ------------AHMLdQGKADDELF--------------VDFLKKLLEIDPKERPTASQALSHPWL 262
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
3-201 8.29e-41

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 149.78  E-value: 8.29e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKM-PNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDilqpphidYFEE---IYVVTELMQ-SDLHKI 77
Cdd:COG0515    26 ARDLRLGRPVALKVLrPELAADPEARERFRREARALARLNHPNIVRVYD--------VGEEdgrPYLVMEYVEgESLADL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAP 157
Cdd:COG0515    98 LRRRGPLPPAEALRILAQLAEALAAAHAAGIVHRDIKPANILLTPDGRVKLIDFGIARALGGATLTQTGTVVGTPGYMAP 177
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1907080392 158 EILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 201
Cdd:COG0515   178 EQARG-EPVDPRSDVYSLGVTLYELLTGRPPFDGDSPAELLRAH 220
STKc_CDKL1_4 cd07847
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; ...
9-274 8.99e-41

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL1/4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270837 [Multi-domain]  Cd Length: 286  Bit Score: 145.21  E-value: 8.99e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELM-QSDLHKIIVSPQPLSSD 87
Cdd:cd07847    26 GQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK-----RKLHLVFEYCdHTVLNELEKNPRGVPEH 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHmTQEVVTQYYRAPEILMGSRHYS 167
Cdd:cd07847   101 LIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY-TDYVATRWYRAPELLVGDTQYG 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLG--TPS-LEAMRTACEGAKAHILRGPHKQPsLPVLYtlsSQA 244
Cdd:cd07847   180 PPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGdlIPRhQQIFSTNQFFKGLSIPEPETREP-LESKF---PNI 255
                         250       260       270
                  ....*....|....*....|....*....|
gi 1907080392 245 THEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd07847   256 SSPALSFLKGCLQMDPTERLSCEELLEHPY 285
STKc_AMPK-like cd14003
Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze ...
9-274 9.52e-41

Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AMPK-like subfamily is composed of AMPK, MARK, BRSK, NUAK, MELK, SNRK, TSSK, and SIK, among others. LKB1 serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. BRSKs play important roles in establishing neuronal polarity. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. The AMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270905 [Multi-domain]  Cd Length: 252  Bit Score: 144.20  E-value: 9.52e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIdyfeeIYVVTELMQS-DLHKIIVSPQPLSSD 87
Cdd:cd14003    25 GEKVAIKIIDKSKLKEEIEEKIKREIEIMKLLNHPNIIKLYEVIETENK-----IYLVMEYASGgELFDYIVNNGRLSED 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDeSRHMTQeVVTQYYRAPEILMGSRHYS 167
Cdd:cd14003   100 EARRFFQQLISAVDYCHSNGIVHRDLKLENILLDKNGNLKIIDFGLSNEFRGG-SLLKTF-CGTPAYAAPEVLLGRKYDG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NAIDIWSVGCI-FAELLGRriL-FQAQSPIQQLDLitdllgtpsleamrtacegakahILRGPhkqpslpvlYTLSSQAT 245
Cdd:cd14003   178 PKADVWSLGVIlYAMLTGY--LpFDDDNDSKLFRK-----------------------ILKGK---------YPIPSHLS 223
                         250       260
                  ....*....|....*....|....*....
gi 1907080392 246 HEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14003   224 PDARDLIRRMLVVDPSKRITIEEILNHPW 252
STKc_MAP3K-like cd13999
Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine ...
9-201 1.70e-40

Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed mainly of MAP3Ks and similar proteins, including TGF-beta Activated Kinase-1 (TAK1, also called MAP3K7), MAP3K12, MAP3K13, Mixed lineage kinase (MLK), MLK-Like mitogen-activated protein Triple Kinase (MLTK), and Raf (Rapidly Accelerated Fibrosarcoma) kinases. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Also included in this subfamily is the pseudokinase Kinase Suppressor of Ras (KSR), which is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway.


Pssm-ID: 270901 [Multi-domain]  Cd Length: 245  Bit Score: 143.06  E-value: 1.70e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIdyfeeiYVVTELMQ-SDLHKIIVSPQ-PLS 85
Cdd:cd13999    16 GTDVAIKKLKVEDDNDELLKEFRREVSILSKLRHPNIVQFIGAcLSPPPL------CIVTEYMPgGSLYDLLHKKKiPLS 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  86 SDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhMTQEVVTQYYRAPEILMGSRh 165
Cdd:cd13999    90 WSLRLKIALDIARGMNYLHSPPIIHRDLKSLNILLDENFTVKIADFGLSRIKNSTTEK-MTGVVGTPRWMAPEVLRGEP- 167
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1907080392 166 YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 201
Cdd:cd13999   168 YTEKADVYSFGIVLWELLTGEVPFKELSPIQIAAAV 203
PTZ00036 PTZ00036
glycogen synthase kinase; Provisional
10-279 1.78e-40

glycogen synthase kinase; Provisional


Pssm-ID: 173333 [Multi-domain]  Cd Length: 440  Bit Score: 148.26  E-value: 1.78e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKM---PNvFQNlvsckrvfRELKMLCFFKHDNVLSALDILQPPHIDYFEE---IYVVTELMQSDLHKIIV---- 79
Cdd:PTZ00036   92 EKVAIKKVlqdPQ-YKN--------RELLIMKNLNHINIIFLKDYYYTECFKKNEKnifLNVVMEFIPQTVHKYMKhyar 162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC-VLKICDFGLARveELDESRHMTQEVVTQYYRAPE 158
Cdd:PTZ00036  163 NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNThTLKLCDFGSAK--NLLAGQRSVSYICSRFYRAPE 240
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTAceGAKAHILRGPHKQPSlpVLY 238
Cdd:PTZ00036  241 LMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM--NPNYADIKFPDVKPK--DLK 316
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 239 TLSSQAT-HEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGR 279
Cdd:PTZ00036  317 KVFPKGTpDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358
Pkinase pfam00069
Protein kinase domain;
8-275 1.10e-38

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 137.76  E-value: 1.10e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQ-SDLHKIIVSPQPLSS 86
Cdd:pfam00069  23 TGKIVAIKKIKKEKIKKKKDKNILREIKILKKLNHPNIVRLYDAFEDK-----DNLYLVLEYVEgGSLFDLLSEKGAFSE 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYlhsagilhrdikpgnllvnsncvlkicdfglarveeldeSRHMTQEVVTQYYRAPEILmGSRHY 166
Cdd:pfam00069  98 REAKFIMKQILEGLES---------------------------------------GSSLTTFVGTPWYMAPEVL-GGNPY 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SNAIDIWSVGCIFAELLGRRILFQAQSPIQQldlitdllgtpsleamrtacegaKAHILRGPHKQPSLPvlYTLSSqath 246
Cdd:pfam00069 138 GPKVDVWSLGCILYELLTGKPPFPGINGNEI-----------------------YELIIDQPYAFPELP--SNLSE---- 188
                         250       260
                  ....*....|....*....|....*....
gi 1907080392 247 EAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:pfam00069 189 EAKDLLKKLLKKDPSKRLTATQALQHPWF 217
STKc_Nek cd08215
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; ...
3-275 1.21e-38

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270855 [Multi-domain]  Cd Length: 258  Bit Score: 138.75  E-value: 1.21e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSaldilqppHIDYFEE---IYVVTELMQS-DLHKII 78
Cdd:cd08215    19 VRRKSDGKLYVLKEIDLSNMSEKEREEALNEVKLLSKLKHPNIVK--------YYESFEEngkLCIVMEYADGgDLAQKI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 ----VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVV-TQY 153
Cdd:cd08215    91 kkqkKKGQPFPEEQILDWFVQICLALKYLHSRKILHRDLKTQNIFLTKDGVVKLGDFGISKV--LESTTDLAKTVVgTPY 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 YRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqQLDLITdllgtpsleamrtacegaKahILRGPHkqPS 233
Cdd:cd08215   169 YLSPELCEN-KPYNYKSDIWALGCVLYELCTLKHPFEANN---LPALVY------------------K--IVKGQY--PP 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 234 LPVLYtlsSQATHEAVHllcRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd08215   223 IPSQY---SSELRDLVN---SMLQKDPEKRPSANEILSSPFI 258
STKc_MAPKKK cd06606
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase ...
4-275 4.15e-38

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270783 [Multi-domain]  Cd Length: 258  Bit Score: 137.27  E-value: 4.15e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIDYFEEiYV----VTELMQSDlhkii 78
Cdd:cd06606    20 LNLDTGELMAVKEVELSGDSEEELEALEREIRILSSLKHPNIVRYLGTeRTENTLNIFLE-YVpggsLASLLKKF----- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 vspQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-TQYYRAP 157
Cdd:cd06606    94 ---GKLPEPVVRKYTRQILEGLEYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLAEIATGEGTKSLRgTPYWMAP 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMGSRHySNAIDIWSVGCIFAELL-GRRILFQAQSPIQQLdlitdllgtpsleaMRTACEGAKahilrgphkqPSLPV 236
Cdd:cd06606   171 EVIRGEGY-GRAADIWSLGCTVIEMAtGKPPWSELGNPVAAL--------------FKIGSSGEP----------PPIPE 225
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1907080392 237 lyTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06606   226 --HLSE----EAKDFLRKCLQRDPKKRPTADELLQHPFL 258
STKc_Chk2 cd14084
Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze ...
29-275 4.27e-38

Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Checkpoint Kinase 2 (Chk2) plays an important role in cellular responses to DNA double-strand breaks and related lesions. It is phosphorylated and activated by ATM kinase, resulting in its dissociation from sites of damage to phosphorylate downstream targets such as BRCA1, p53, cell cycle transcription factor E2F1, the promyelocytic leukemia protein (PML) involved in apoptosis, and CDC25 phosphatases, among others. Mutations in Chk2 is linked to a variety of cancers including familial breast cancer, myelodysplastic syndromes, prostate cancer, lung cancer, and osteosarcomas. Chk2 contains an N-terminal SQ/TQ cluster domain (SCD), a central forkhead-associated (FHA) domain, and a C-terminal catalytic kinase domain. The Chk2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270986 [Multi-domain]  Cd Length: 275  Bit Score: 137.91  E-value: 4.27e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14084    57 NIETEIEILKKLSHPCIIKIEDFFDAE-----DDYYIVLELMEGgELFDRVVSNKRLKEAICKLYFYQMLLAVKYLHSNG 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLVNSN---CVLKICDFGLARVeeLDESRHMTQEVVTQYYRAPEILM--GSRHYSNAIDIWSVGCIfael 182
Cdd:cd14084   132 IIHRDLKPENVLLSSQeeeCLIKITDFGLSKI--LGETSLMKTLCGTPTYLAPEVLRsfGTEGYTRAVDCWSLGVI---- 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 183 lgrrilfqaqspiqqldLITDLLGTPSLEAMRTAcEGAKAHILRGPhkqpslpvlYTLSSQA----THEAVHLLCRMLVF 258
Cdd:cd14084   206 -----------------LFICLSGYPPFSEEYTQ-MSLKEQILSGK---------YTFIPKAwknvSEEAKDLVKKMLVV 258
                         250
                  ....*....|....*..
gi 1907080392 259 DPSKRISAKDALAHPYL 275
Cdd:cd14084   259 DPSRRPSIEEALEHPWL 275
STKc_CDK8 cd07868
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8; STKs ...
5-275 6.78e-37

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270851 [Multi-domain]  Cd Length: 333  Bit Score: 136.34  E-value: 6.78e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNLVSCkrvfRELKMLCFFKHDNVLSALDILQPpHIDyfEEIYVVTELMQSDLHKIIV----- 79
Cdd:cd07868    40 DGKDDKDYALKQIEGTGISMSAC----REIALLRELKHPNVISLQKVFLS-HAD--RKVWLLFDYAEHDLWHIIKfhras 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 ----SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV----LKICDFGLARV--EELDESRHMTQEV 149
Cdd:cd07868   113 kankKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPergrVKIADMGFARLfnSPLKPLADLDPVV 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 150 VTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQA-QSPIQ--------QLDLITDLLGTPSLEAMRTACEGA 220
Cdd:cd07868   193 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCrQEDIKtsnpyhhdQLDRIFNVMGFPADKDWEDIKKMP 272
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 221 KAHILRGPHKQPSLPVLYTLSSQATH------EAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07868   273 EHSTLMKDFRRNTYTNCSLIKYMEKHkvkpdsKAFHLLQKLLTMDPIKRITSEQAMQDPYF 333
STKc_PLK cd14099
Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the ...
3-275 1.01e-36

Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. PLKs derive their names from homology to polo, a kinase first identified in Drosophila. There are five mammalian PLKs (PLK1-5) from distinct genes. There is good evidence that PLK1 may function as an oncogene while PLK2-5 have tumor suppressive properties. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. PLK2 functions in G1 progression, S-phase arrest, and centriole duplication. PLK3 regulates angiogenesis and responses to DNA damage. PLK4 is required for late mitotic progression, cell survival, and embryonic development. PLK5 was first identified as a pseudogene containing a stop codon within the kinase domain, however, both murine and human genes encode expressed proteins. PLK5 functions in cell cycle arrest.


Pssm-ID: 271001 [Multi-domain]  Cd Length: 258  Bit Score: 133.83  E-value: 1.01e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNvfQNLVSCK---RVFRELKMLCFFKHDNVLSaldilqppHIDYFEE---IYVVTELM--QS-- 72
Cdd:cd14099    20 VTDMSTGKVYAGKVVPK--SSLTKPKqreKLKSEIKIHRSLKHPNIVK--------FHDCFEDeenVYILLELCsnGSlm 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  73 DLHKiivSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTqevV-- 150
Cdd:cd14099    90 ELLK---RRKALTEPEVRYFMRQILSGVKYLHSNRIIHRDLKLGNLFLDENMNVKIGDFGLAARLEYDGERKKT---Lcg 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 151 TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQaqspiqqldlitdllgTPSLEAMRtacegakAHILRGPHK 230
Cdd:cd14099   164 TPNYIAPEVLEKKKGHSFEVDIWSLGVILYTLLVGKPPFE----------------TSDVKETY-------KRIKKNEYS 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392 231 QPSlpvlytlSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14099   221 FPS-------HLSISDEAKDLIRSMLQPDPTKRPSLDEILSHPFF 258
STKc_CDC2L6 cd07867
Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6; STKs catalyze the ...
5-275 2.33e-36

Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270850 [Multi-domain]  Cd Length: 318  Bit Score: 134.43  E-value: 2.33e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNLVSCkrvfRELKMLCFFKHDNVLsALDILQPPHIDyfEEIYVVTELMQSDLHKIIV----- 79
Cdd:cd07867    25 DGKDEKEYALKQIEGTGISMSAC----REIALLRELKHPNVI-ALQKVFLSHSD--RKVWLLFDYAEHDLWHIIKfhras 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 ----SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV----LKICDFGLARV--EELDESRHMTQEV 149
Cdd:cd07867    98 kankKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPergrVKIADMGFARLfnSPLKPLADLDPVV 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 150 VTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILF-------QAQSPIQ--QLDLITDLLGTPS---LEAMRtac 217
Cdd:cd07867   178 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFhcrqediKTSNPFHhdQLDRIFSVMGFPAdkdWEDIR--- 254
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392 218 egakahilrgphKQPSLPVL--------YTLSSQATHEAVH----------LLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd07867   255 ------------KMPEYPTLqkdfrrttYANSSLIKYMEKHkvkpdskvflLLQKLLTMDPTKRITSEQALQDPYF 318
STKc_Aurora cd14007
Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of ...
7-275 7.24e-36

Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Yeast contains only one Aurora kinase while most higher eukaryotes have two. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2. Aurora-B is most active at the transition during metaphase to the end of mitosis. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270909 [Multi-domain]  Cd Length: 253  Bit Score: 131.06  E-value: 7.24e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPnvFQNLVSCKRVF---RELKMLCFFKHDNVLSALDilqpphidYFEE---IYVVTELM-QSDLHKIIV 79
Cdd:cd14007    23 KSGFIVALKVIS--KSQLQKSGLEHqlrREIEIQSHLRHPNILRLYG--------YFEDkkrIYLILEYApNGELYKELK 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQeVVTQYYRAPEI 159
Cdd:cd14007    93 KQKRFDEKEAAKYIYQLALALDYLHSKNIIHRDIKPENILLGSNGELKLADFGWSV--HAPSNRRKTF-CGTLDYLPPEM 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMGsRHYSNAIDIWSVGCIFAELlgrrilfqaqspiqqldlitdLLGTPSLEAMRTacEGAKAHILRGPHKQPSlpvlyT 239
Cdd:cd14007   170 VEG-KEYDYKVDIWSLGVLCYEL---------------------LVGKPPFESKSH--QETYKRIQNVDIKFPS-----S 220
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1907080392 240 LSSqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14007   221 VSP----EAKDLISKLLQKDPSKRLSLEQVLNHPWI 252
PKc_DYRK cd14210
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
5-275 3.33e-35

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase; Protein Kinases (PKs), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK) subfamily, catalytic (c) domain. Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. The DYRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein S/T PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. They play important roles in cell proliferation, differentiation, survival, and development. Vertebrates contain multiple DYRKs (DYRK1-4) and mammals contain two types of DYRK1 proteins, DYRK1A and DYRK1B. DYRK1A is involved in neuronal differentiation and is implicated in the pathogenesis of DS (Down syndrome). DYRK1B plays a critical role in muscle differentiation by regulating transcription, cell motility, survival, and cell cycle progression. It is overexpressed in many solid tumors where it acts as a tumor survival factor. DYRK2 promotes apoptosis in response to DNA damage by phosphorylating the tumor suppressor p53, while DYRK3 promotes cell survival by phosphorylating SIRT1 and promoting p53 deacetylation. DYRK4 is a testis-specific kinase that may function during spermiogenesis.


Pssm-ID: 271112 [Multi-domain]  Cd Length: 311  Bit Score: 131.13  E-value: 3.33e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKkmpnvfqnLVSCKRVFR-----ELKMLCFFKHDNVLSALDILQppHIDYF---EEIYVVTELMQSDLHK 76
Cdd:cd14210    34 DHKTGQLVAIK--------IIRNKKRFHqqalvEVKILKHLNDNDPDDKHNIVR--YKDSFifrGHLCIVFELLSINLYE 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  77 IIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV--NSNCVLKICDFGLA-----RVEELDESRhmtq 147
Cdd:cd14210   104 LLKSNnfQGLSLSLIRKFAKQILQALQFLHKLNIIHCDLKPENILLkqPSKSSIKVIDFGSScfegeKVYTYIQSR---- 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 148 evvtqYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLE----AMRTAC----EG 219
Cdd:cd14210   180 -----FYRAPEVILGLP-YDTAIDMWSLGCILAELYTGYPLFPGENEEEQLACIMEVLGVPPKSlidkASRRKKffdsNG 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 220 AKAHILRGPHKQ--PSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14210   254 KPRPTTNSKGKKrrPGSKSLAQVLKCDDPSFLDFLKKCLRWDPSERMTPEEALQHPWI 311
STKc_Cdc7 cd14019
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; STKs catalyze ...
4-275 2.12e-34

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Cdc7 kinase (or Hsk1 in fission yeast) is a critical regulator in the initiation of DNA replication. It forms a complex with a Dbf4-related regulatory subunit, a cyclin-like molecule that activates the kinase in late G1 phase, and is also referred to as Dbf4-dependent kinase (DDK). Its main targets are mini-chromosome maintenance (MCM) proteins. Cdc7 kinase may also have additional roles in meiosis, checkpoint responses, the maintenance and repair of chromosome structures, and cancer progression. The Cdc7 kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270921 [Multi-domain]  Cd Length: 252  Bit Score: 127.34  E-value: 2.12e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKM-PNVfqnlvSCKRVFRELKML--------------CFFKHDNVLSALDILQppHIDyFEEIYvvte 68
Cdd:cd14019    28 YDRNKGRLVALKHIyPTS-----SPSRILNELECLerlggsnnvsglitAFRNEDQVVAVLPYIE--HDD-FRDFY---- 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  69 lmqsdlHKiivspqpLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS-NCVLKICDFGLARVEElDESRHMTQ 147
Cdd:cd14019    96 ------RK-------MSLTDIRIYLRNLFKALKHVHSFGIIHRDVKPGNFLYNReTGKGVLVDFGLAQREE-DRPEQRAP 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 148 EVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELL-GRRILFQAQSPIQQLDLITDLLGTPsleamrtacegakahilr 226
Cdd:cd14019   162 RAGTRGFRAPEVLFKCPHQTTAIDIWSAGVILLSILsGRFPFFFSSDDIDALAEIATIFGSD------------------ 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1907080392 227 gphkqpslpvlytlssqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14019   224 --------------------EAYDLLDKLLELDPSKRITAEEALKHPFF 252
STKc_Rad53_Cds1 cd14098
Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the ...
30-274 3.99e-34

Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Rad53 and Cds1 are the checkpoint kinase 2 (Chk2) homologs found in budding and fission yeast, respectively. They play a central role in the cell's response to DNA lesions to prevent genome rearrangements and maintain genome integrity. They are phosphorylated in response to DNA damage and incomplete replication, and are essential for checkpoint control. They help promote DNA repair by stalling the cell cycle prior to mitosis in the presence of DNA damage. The Rad53/Cds1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271000 [Multi-domain]  Cd Length: 265  Bit Score: 126.82  E-value: 3.99e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI 108
Cdd:cd14098    48 FQREINILKSLEHPGIVRLIDWYEDD-----QHIYLVMEYVEGgDLMDFIMAWGAIPEQHARELTKQILEAMAYTHSMGI 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 109 LHRDIKPGNLLVNSN--CVLKICDFGLARVEELDEsrHMTQEVVTQYYRAPEILMGSRH-----YSNAIDIWSVGCIFAE 181
Cdd:cd14098   123 THRDLKPENILITQDdpVIVKISDFGLAKVIHTGT--FLVTFCGTMAYLAPEILMSKEQnlqggYSNLVDMWSVGCLVYV 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 182 LLGRRILFQAQSPIQQLDLITdllgtpsleamrtacegakahilRGPHKQPSLpvlytLSSQATHEAVHLLCRMLVFDPS 261
Cdd:cd14098   201 MLTGALPFDGSSQLPVEKRIR-----------------------KGRYTQPPL-----VDFNISEEAIDFILRLLDVDPE 252
                         250
                  ....*....|...
gi 1907080392 262 KRISAKDALAHPY 274
Cdd:cd14098   253 KRMTAAQALDHPW 265
STKc_LKB1_CaMKK cd14008
Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent ...
8-275 5.07e-34

Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent Protein Kinase Kinase, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Both LKB1 and CaMKKs can phosphorylate and activate AMP-activated protein kinase (AMPK). LKB1, also called STK11, serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMPK. Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The LKB1/CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270910 [Multi-domain]  Cd Length: 267  Bit Score: 126.90  E-value: 5.07e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALK-------KMPNVFQNLVSCKR-----VFRELKMLCFFKHDNVLSALDILQPPHIDYfeeIYVVTELMQ---- 71
Cdd:cd14008    17 TGQLYAIKifnksrlRKRREGKNDRGKIKnalddVRREIAIMKKLDHPNIVRLYEVIDDPESDK---LYLVLEYCEggpv 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  72 ---SDLHKiivsPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQE 148
Cdd:cd14008    94 melDSGDR----VPPLPEETARKYFRDLVLGLEYLHENGIVHRDIKPENLLLTADGTVKISDFGVSEM--FEDGNDTLQK 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 149 VV-TQYYRAPEIL-MGSRHYS-NAIDIWSVG-CIFAELLGrRILFQAQSPIQQLDLITDllgtpsleamrtacegakahi 224
Cdd:cd14008   168 TAgTPAFLAPELCdGDSKTYSgKAADIWALGvTLYCLVFG-RLPFNGDNILELYEAIQN--------------------- 225
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 225 lrgpHKQPslpvlYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14008   226 ----QNDE-----FPIPPELSPELKDLLRRMLEKDPEKRITLKEIKEHPWV 267
STKc_PRP4 cd14135
Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4; STKs catalyze ...
56-275 5.97e-34

Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PRP4 phosphorylates a number of factors involved in the formation of active spliceosomes, which catalyze pre-mRNA splicing. It phosphorylates PRP6 and PRP31, components of the U4/U6-U5 tri-small nuclear ribonucleoprotein (snRNP), during spliceosomal complex formation. In fission yeast, PRP4 phosphorylates the splicing factor PRP1 (U5-102 kD in mammals). Thus, PRP4 plays a key role in regulating spliceosome assembly and pre-mRNA splicing. It also plays an important role in mitosis by acting as a spindle assembly checkpoint kinase that is required for chromosome alignment and the recruitment of the checkpoint proteins MPS1, MAD1, and MAD2 at kinetochores. The PRP4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271037 [Multi-domain]  Cd Length: 318  Bit Score: 127.72  E-value: 5.97e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  56 HIDYFEEIYVVTELMQSDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN-CVLKICDF 131
Cdd:cd14135    71 HFEHKNHLCLVFESLSMNLREVLKkygKNVGLNIKAVRSYAQQLFLALKHLKKCNILHADIKPDNILVNEKkNTLKLCDF 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 132 GLA-RVEELDesrhMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 210
Cdd:cd14135   151 GSAsDIGENE----ITPYLVSRFYRAPEIILGLP-YDYPIDMWSVGCTLYELYTGKILFPGKTNNHMLKLMMDLKGKFPK 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 211 EAMRtacegakAHILRGPHKQPSLPVLYTLSSQATHEAV-----------------------------------HLLCRM 255
Cdd:cd14135   226 KMLR-------KGQFKDQHFDENLNFIYREVDKVTKKEVrrvmsdikptkdlktlligkqrlpdedrkkllqlkDLLDKC 298
                         250       260
                  ....*....|....*....|
gi 1907080392 256 LVFDPSKRISAKDALAHPYL 275
Cdd:cd14135   299 LMLDPEKRITPNEALQHPFI 318
PKc_MAPKK_plant_like cd06623
Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and ...
3-275 9.61e-34

Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and similar proteins; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis; MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling; MKK2 is involved in cold and salt stress signaling; MKK4/MKK5 participates in innate immunity; and MKK7 regulates basal and systemic acquired resistance. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132954 [Multi-domain]  Cd Length: 264  Bit Score: 125.78  E-value: 9.61e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMpNVFQNLVSCKRVFRELKMLCFFKHDNVLSAldilqppHIDYFEE--IYVVTELM-QSDLHKIIV 79
Cdd:cd06623    20 VRHKPTGKIYALKKI-HVDGDEEFRKQLLRELKTLRSCESPYVVKC-------YGAFYKEgeISIVLEYMdGGSLADLLK 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVV-TQYYRAP 157
Cdd:cd06623    92 KVGKIPEPVLAYIARQILKGLDYLHTkRHIIHRDIKPSNLLINSKGEVKIADFGISKV--LENTLDQCNTFVgTVTYMSP 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLItdllgtpsleamrtacegakAHILRGPhkQPSLPvl 237
Cdd:cd06623   170 ERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM--------------------QAICDGP--PPSLP-- 224
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 238 ytlSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06623   225 ---AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFI 259
STKc_STK36 cd14002
Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the ...
8-275 1.75e-33

Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK36, also called Fused (or Fu) kinase, is involved in the Hedgehog signaling pathway. It is activated by the Smoothened (SMO) signal transducer, resulting in the stabilization of GLI transcription factors and the phosphorylation of SUFU to facilitate the nuclear accumulation of GLI. In Drosophila, Fused kinase is maternally required for proper segmentation during embryonic development and for the development of legs and wings during the larval stage. In mice, STK36 is not necessary for embryonic development, although mice deficient in STK36 display growth retardation postnatally. The STK36 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270904 [Multi-domain]  Cd Length: 253  Bit Score: 125.06  E-value: 1.75e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDilqpphidYFE---EIYVVTELMQSDLHKIIVSPQPL 84
Cdd:cd14002    25 TGQVVALKFIPKRGKSEKELRNLRQEIEILRKLNHPNIIEMLD--------SFEtkkEFVVVTEYAQGELFQILEDDGTL 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDeSRHMTQEVVTQYYRAPEiLMGSR 164
Cdd:cd14002    97 PEEEVRSIAKQLVSALHYLHSNRIIHRDMKPQNILIGKGGVVKLCDFGFARAMSCN-TLVLTSIKGTPLYMAPE-LVQEQ 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 HYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlITDLLGtpsleamrtacegakaHILRGPHKQPSlpvlyTLSSqa 244
Cdd:cd14002   175 PYDHTADLWSLGCILYELFVGQPPFYTNS-------IYQLVQ----------------MIVKDPVKWPS-----NMSP-- 224
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1907080392 245 thEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14002   225 --EFKSFLQGLLNKDPSKRLSWPDLLEHPFV 253
STKc_PAK cd06614
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the ...
1-275 3.86e-33

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270789 [Multi-domain]  Cd Length: 255  Bit Score: 123.86  E-value: 3.86e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   1 MSVTDPRDGKRVALKKMPNVFQNLvscKRVFRELKMLCFFKHDNVLSALD--ILQpphidyfEEIYVVTELMQS----DL 74
Cdd:cd06614    17 YKATDRATGKEVAIKKMRLRKQNK---ELIINEILIMKECKHPNIVDYYDsyLVG-------DELWVVMEYMDGgsltDI 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 hkIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQY 153
Cdd:cd06614    87 --ITQNPVRMNESQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFA--AQLTKEKSKRNSVVgTPY 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 YRAPEILMGSRhYSNAIDIWSVGCIFAELL-GRRILFQaQSPIQQLDLITDlLGTPSleamrtacegakahiLRGPHKqp 232
Cdd:cd06614   163 WMAPEVIKRKD-YGPKVDIWSLGIMCIEMAeGEPPYLE-EPPLRALFLITT-KGIPP---------------LKNPEK-- 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1907080392 233 slpvlytlssqATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06614   223 -----------WSPEFKDFLNKCLVKDPEKRPSAEELLQHPFL 254
STKc_ATG1_ULK_like cd14009
Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like ...
10-274 1.58e-32

Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes yeast ATG1 and metazoan homologs including vertebrate ULK1-3. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. It is involved in nutrient sensing and signaling, the assembly of autophagy factors and the execution of autophagy. In metazoans, ATG1 homologs display additional functions. Unc-51 and ULKs have been implicated in neuronal and axonal development. The ATG1/ULK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270911 [Multi-domain]  Cd Length: 251  Bit Score: 122.33  E-value: 1.58e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKM-PNVFQNLVSckrvfrELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSD 87
Cdd:cd14009    24 KEISRKKLnKKLQENLES------EIAILKSIKHPNIVRLYDVQKTE-----DFIYLVLEYCAGgDLSQYIRKRGRLPEA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLArveeldesRHMTQEVVTQ------YYRAPE 158
Cdd:cd14009    93 VARHFMQQLASGLKFLRSKNIIHRDLKPQNLLLSTsgdDPVLKIADFGFA--------RSLQPASMAEtlcgspLYMAPE 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLItdllgtpsleaMRTAcegakahilrgphKQPSLPVLY 238
Cdd:cd14009   165 ILQ-FQKYDAKADLWSVGAILFEMLVGKPPFRGSNHVQLLRNI-----------ERSD-------------AVIPFPIAA 219
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1907080392 239 TLSSqathEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14009   220 QLSP----DCKDLLRRLLRRDPAERISFEEFFAHPF 251
STKc_ULK1_2-like cd14120
Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar ...
22-274 3.98e-32

Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. ULK2 is ubiquitously expressed and is essential in autophagy induction. ULK1 and ULK2 have unique and cell-type specific roles, but also display partially redundant roles in starvation-induced autophagy. They both display neuron-specific functions: ULK1 is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, and axon branching; ULK2 plays a role in axon development. The ULK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271022 [Multi-domain]  Cd Length: 256  Bit Score: 121.32  E-value: 3.98e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  22 QNLVSckrvfRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGL 100
Cdd:cd14120    36 QNLLG-----KEIKILKELSHENVVALLDCQETSS-----SVYLVMEYCNGgDLADYLQAKGTLSEDTIRVFLQQIAAAM 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 101 KYLHSAGILHRDIKPGNLLVNSNC---------VLKICDFGLArveeldesRHMTQEVV------TQYYRAPEILMgSRH 165
Cdd:cd14120   106 KALHSKGIVHRDLKPQNILLSHNSgrkpspndiRLKIADFGFA--------RFLQDGMMaatlcgSPMYMAPEVIM-SLQ 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 YSNAIDIWSVGCIFAELLGRRILFQAQSPiQQLDLITDllgtpsleamrtacegaKAHILRgphkqPSLPVlyTLSSQAT 245
Cdd:cd14120   177 YDAKADLWSIGTIVYQCLTGKAPFQAQTP-QELKAFYE-----------------KNANLR-----PNIPS--GTSPALK 231
                         250       260
                  ....*....|....*....|....*....
gi 1907080392 246 heavHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14120   232 ----DLLLGLLKRNPKDRIDFEDFFSHPF 256
STKc_ULK4 cd14010
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the ...
10-274 1.66e-31

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ULK4 is a functionally uncharacterized kinase that shows similarity to ATG1/ULKs. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. The ULK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270912 [Multi-domain]  Cd Length: 269  Bit Score: 120.09  E-value: 1.66e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPNVfQNLVsckRVFRELKmlcffkHDNVLSaldilqpphidyFEEIY-------VVTEL-MQSDLHKIIVSP 81
Cdd:cd14010    31 KCVDKSKRPEV-LNEV---RLTHELK------HPNVLK------------FYEWYetsnhlwLVVEYcTGGDLETLLRQD 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV--EELDESRHMTQE----------- 148
Cdd:cd14010    89 GNLPESSVRKFGRDLVRGLHYIHSKGIIYCDLKPSNILLDGNGTLKLSDFGLARRegEILKELFGQFSDegnvnkvskkq 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 149 --VVTQYYRAPEILMGSRHySNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlITDLLGTpsleamrtacegakahILr 226
Cdd:cd14010   169 akRGTPYYMAPELFQGGVH-SFASDLWALGCVLYEMFTGKPPFVAES-------FTELVEK----------------IL- 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1907080392 227 gpHKQPSLPVLyTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14010   224 --NEDPPPPPP-KVSSKPSPDFKSLLKGLLEKDPAKRLSWDELVKHPF 268
STKc_Cdc7_like cd06627
Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs ...
5-275 4.30e-31

Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270797 [Multi-domain]  Cd Length: 254  Bit Score: 118.48  E-value: 4.30e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSaldilqppHIDYFEE---IYVVTELMQS-DLHKIIVS 80
Cdd:cd06627    21 NLNTGEFVAIKQISLEKIPKSDLKSVMGEIDLLKKLNHPNIVK--------YIGSVKTkdsLYIILEYVENgSLASIIKK 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHmtqEVV-TQYYRAPE 158
Cdd:cd06627    93 FGKFPESLVAVYIYQVLEGLAYLHEQGVIHRDIKGANILTTKDGLVKLADFGVAtKLNEVEKDEN---SVVgTPYWMAPE 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGSRHySNAIDIWSVGCIFAELlgrrilfqaqspiqqldlitdLLGTP---SLEAMRtacegAKAHILRGPHkqPSLP 235
Cdd:cd06627   170 VIEMSGV-TTASDIWSVGCTVIEL---------------------LTGNPpyyDLQPMA-----ALFRIVQDDH--PPLP 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 236 vlytlsSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06627   221 ------ENISPELRDFLLQCFQKDPTLRPSAKELLKHPWL 254
STKc_MAST_like cd05579
Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs ...
9-275 5.54e-31

Catalytic domain of Microtubule-associated serine/threonine (MAST) kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAST kinases, MAST-like (MASTL) kinases (also called greatwall kinase or Gwl), and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which like in MASTL, also contains an insert relative to MAST kinases. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MASTL/Gwl is involved in the regulation of mitotic entry, mRNA stabilization, and DNA checkpoint recovery. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. The MAST-like kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270731 [Multi-domain]  Cd Length: 272  Bit Score: 118.86  E-value: 5.54e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPN---VFQNLVscKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPL 84
Cdd:cd05579    18 GDLYAIKVIKKrdmIRKNQV--DSVLAERNILSQAQNPFVVKLYYSFQGKK-----NLYLVMEYLPGgDLYSLLENVGAL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV--------------EELDESRHMTQEVV 150
Cdd:cd05579    91 DEDVARIYIAEIVLALEYLHSHGIIHRDLKPDNILIDANGHLKLTDFGLSKVglvrrqiklsiqkkSNGAPEKEDRRIVG 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 151 TQYYRAPEILMGSRHySNAIDIWSVGCIFAELLGRRILFQAQSPiqqlDLITDllgtpsleamrtacegakaHILRGPHK 230
Cdd:cd05579   171 TPDYLAPEILLGQGH-GKTVDWWSLGVILYEFLVGIPPFHAETP----EEIFQ-------------------NILNGKIE 226
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1907080392 231 QPSLPVLytlssqaTHEAVHLLCRMLVFDPSKRI---SAKDALAHPYL 275
Cdd:cd05579   227 WPEDPEV-------SDEAKDLISKLLTPDPEKRLgakGIEEIKNHPFF 267
STKc_SRPK cd14136
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase; STKs catalyze ...
57-275 9.69e-31

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. They play important roles in mediating pre-mRNA processing and mRNA maturation, as well as other cellular functions such as chromatin reorganization, cell cycle and p53 regulation, and metabolic signaling. Vertebrates contain three distinct SRPKs, called SRPK1-3. The SRPK homolog in budding yeast, Sky1p, recognizes and phosphorylates its substrate Npl3p, which lacks a classic RS domain but contains a single RS dipeptide at the C-terminus of its RGG domain. Npl3p is a shuttling heterogeneous nuclear ribonucleoprotein (hnRNP) that exports a distinct class of mRNA from the nucleus to the cytoplasm. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271038 [Multi-domain]  Cd Length: 320  Bit Score: 119.22  E-value: 9.69e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  57 IDYFE-------EIYVVTELMQSDLHKIIVS------PQPLssdhVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVN- 121
Cdd:cd14136    80 LDDFKhtgpngtHVCMVFEVLGPNLLKLIKRynyrgiPLPL----VKKIARQVLQGLDYLHTkCGIIHTDIKPENVLLCi 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 122 SNCVLKICDFGLArveeLDESRHMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELLGRRILFQAQS------PI 195
Cdd:cd14136   156 SKIEVKIADLGNA----CWTDKHFTEDIQTRQYRSPEVILGA-GYGTPADIWSTACMAFELATGDYLFDPHSgedysrDE 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 196 QQLDLITDLLGT-PsleamrtacegaKAHILRGPH-----------------KQPSLP-VL---YTLSSQATHEAVHLLC 253
Cdd:cd14136   231 DHLALIIELLGRiP------------RSIILSGKYsreffnrkgelrhisklKPWPLEdVLvekYKWSKEEAKEFASFLL 298
                         250       260
                  ....*....|....*....|..
gi 1907080392 254 RMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14136   299 PMLEYDPEKRATAAQCLQHPWL 320
STKc_HAL4_like cd13994
Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs ...
5-275 1.22e-30

Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of HAL4, Saccharomyces cerevisiae Ptk2/Stk2, and similar fungal proteins. Proteins in this subfamily are involved in regulating ion transporters. In budding and fission yeast, HAL4 promotes potassium ion uptake, which increases cellular resistance to other cations such as sodium, lithium, and calcium ions. HAL4 stabilizes the major high-affinity K+ transporter Trk1 at the plasma membrane under low K+ conditions, which prevents endocytosis and vacuolar degradation. Budding yeast Ptk2 phosphorylates and regulates the plasma membrane H+ ATPase, Pma1. The HAL4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270896 [Multi-domain]  Cd Length: 265  Bit Score: 117.79  E-value: 1.22e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKM----PNVFQNLVScKRVFRELKMLCFFKHDNVLSALDILQPPHIDYfeeiyvvTELM----QSDLHK 76
Cdd:cd13994    16 NPRSGVLYAVKEYrrrdDESKRKDYV-KRLTSEYIISSKLHHPNIVKVLDLCQDLHGKW-------CLVMeycpGGDLFT 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  77 IIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV--EELDESRHMTQEVV-TQY 153
Cdd:cd13994    88 LIEKADSLSLEEKDCFFKQILRGVAYLHSHGIAHRDLKPENILLDEDGVLKLTDFGTAEVfgMPAEKESPMSAGLCgSEP 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 YRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlITDLLGTPSLEAMRTACEGakahilrgphkqPS 233
Cdd:cd13994   168 YMAPEVFTSGSYDGRAVDVWSCGIVLFALFTGRFPWRSAK-------KSDSAYKAYEKSGDFTNGP------------YE 228
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 234 LPVLYTLSsqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd13994   229 PIENLLPS-----ECRRLIYRMLHPDPEKRITIDEALNDPWV 265
PKc_YAK1 cd14212
Catalytic domain of the Dual-specificity protein kinase, YAK1; Dual-specificity PKs catalyze ...
5-275 3.52e-30

Catalytic domain of the Dual-specificity protein kinase, YAK1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of proteins with similarity to Saccharomyces cerevisiae YAK1 (or Yak1p), a dual-specificity kinase that autophosphorylates at tyrosine residues and phosphorylates substrates on S/T residues. YAK1 phosphorylates and activates the transcription factors Hsf1 and Msn2, which play important roles in cellular homeostasis during stress conditions including heat shock, oxidative stress, and nutrient deficiency. It also phosphorylates the protein POP2, a component of a complex that regulates transcription, under glucose-deprived conditions. It functions as a part of a glucose-sensing system that is involved in controlling growth in yeast. The YAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271114 [Multi-domain]  Cd Length: 330  Bit Score: 118.12  E-value: 3.52e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVF----QNLVSCKrVFRELKMLCFFK-HDNVLSALDilqppHIDYFEEIYVVTELMQSDLHKIIV 79
Cdd:cd14212    20 DLKTNKLVAVKVLKNKPayfrQAMLEIA-ILTLLNTKYDPEdKHHIVRLLD-----HFMHHGHLCIVFELLGVNLYELLK 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV--LKICDFGLArveeLDESRHMTQEVVTQYYR 155
Cdd:cd14212    94 QNQfrGLSLQLIRKFLQQLLDALSVLKDARIIHCDLKPENILLVNLDSpeIKLIDFGSA----CFENYTLYTYIQSRFYR 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 156 APEILMGSrHYSNAIDIWSVGCIFAEL-LGRRiLFQAQSPIQQLDLITDLLGTPSLEAMRTA------------CEGAKA 222
Cdd:cd14212   170 SPEVLLGL-PYSTAIDMWSLGCIAAELfLGLP-LFPGNSEYNQLSRIIEMLGMPPDWMLEKGkntnkffkkvakSGGRST 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 223 HILR-------------GPHKQ-----------PSLPVLYTLSSQATHEA------VHLLCRMLVFDPSKRISAKDALAH 272
Cdd:cd14212   248 YRLKtpeefeaenncklEPGKRyfkyktlediiMNYPMKKSKKEQIDKEMetrlafIDFLKGLLEYDPKKRWTPDQALNH 327

                  ...
gi 1907080392 273 PYL 275
Cdd:cd14212   328 PFI 330
STKc_BRSK1_2 cd14081
Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the ...
9-275 4.73e-30

Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BRSK1, also called SAD-B or SAD1 (Synapses of Amphids Defective homolog 1), and BRSK2, also called SAD-A, are highly expressed in mammalian forebrain. They play important roles in establishing neuronal polarity. BRSK1/2 double knock-out mice die soon after birth, showing thin cerebral cortices due to disordered subplate layers and neurons that lack distinct axons and dendrites. BRSK1 regulates presynaptic neurotransmitter release. Its activity fluctuates during cell cysle progression and it acts as a regulator of centrosome duplication. BRSK2 is also abundant in pancreatic islets, where it is involved in the regulation of glucose-stimulated insulin secretion. The BRSK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270983 [Multi-domain]  Cd Length: 255  Bit Score: 115.81  E-value: 4.73e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMP-NVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSS 86
Cdd:cd14081    26 GQKVAIKIVNkEKLSKESVLMKVEREIAIMKLIEHPNVLKLYDVYENK-----KYLYLVLEYVSGgELFDYLVKKGRLTE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDesrHMTQEVV-TQYYRAPEILMGSRH 165
Cdd:cd14081   101 KEARKFFRQIISALDYCHSHSICHRDLKPENLLLDEKNNIKIADFGMASLQPEG---SLLETSCgSPHYACPEVIKGEKY 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 YSNAIDIWSVGCIFAELLGRRILFQAQSpIQQLdlitdllgtpsLEAMRTacegAKAHIlrgPHKQPSlpvlytlssqat 245
Cdd:cd14081   178 DGRKADIWSCGVILYALLVGALPFDDDN-LRQL-----------LEKVKR----GVFHI---PHFISP------------ 226
                         250       260       270
                  ....*....|....*....|....*....|
gi 1907080392 246 hEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14081   227 -DAQDLLRRMLEVNPEKRITIEEIKKHPWF 255
STKc_CAMKK cd14118
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; ...
29-274 1.30e-29

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271020 [Multi-domain]  Cd Length: 275  Bit Score: 115.15  E-value: 1.30e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKMLCFFKHDNVLSALDILQPPHIDYFeeiYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI 108
Cdd:cd14118    60 RVYREIAILKKLDHPNVVKLVEVLDDPNEDNL---YMVFELVDKGAVMEVPTDNPLSEETARSYFRDIVLGIEYLHYQKI 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 109 LHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhMTQEVVTQYYRAPEILMGSRH-YS-NAIDIWSVGCIFAELLGRR 186
Cdd:cd14118   137 IHRDIKPSNLLLGDDGHVKIADFGVSNEFEGDDAL-LSSTAGTPAFMAPEALSESRKkFSgKALDIWAMGVTLYCFVFGR 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 187 ILFQAQSPIQQLDLI-TDllgtpsleamrtacegakahilrgPHKQPSLPVLytlssqaTHEAVHLLCRMLVFDPSKRIS 265
Cdd:cd14118   216 CPFEDDHILGLHEKIkTD------------------------PVVFPDDPVV-------SEQLKDLILRMLDKNPSERIT 264

                  ....*....
gi 1907080392 266 AKDALAHPY 274
Cdd:cd14118   265 LPEIKEHPW 273
STKc_MEKK1_plant cd06632
Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP) ...
8-275 1.57e-29

Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of plant MAPK kinase kinases (MAPKKKs) including Arabidopsis thaliana MEKK1 and MAPKKK3. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270802 [Multi-domain]  Cd Length: 259  Bit Score: 114.42  E-value: 1.57e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLV---SCKRVFRELKMLCFFKHDNvlsaldILQpphidYF------EEIYVVTELM-QSDLHKI 77
Cdd:cd06632    24 TGDFFAVKEVSLVDDDKKsreSVKQLEQEIALLSKLRHPN------IVQ-----YYgtereeDNLYIFLEYVpGGSIHKL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVVTQYYRAP 157
Cdd:cd06632    93 LQRYGAFEEPVIRLYTRQILSGLAYLHSRNTVHRDIKGANILVDTNGVVKLADFGMAKH--VEAFSFAKSFKGSPYWMAP 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMG-SRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQldlitdllgtpsleamrtaCEGAKAHILRGphKQPSLPV 236
Cdd:cd06632   171 EVIMQkNSGYGLAVDIWSLGCTVLEMA------TGKPPWSQ-------------------YEGVAAIFKIG--NSGELPP 223
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 237 L-YTLSSQATHEAVHLLCRmlvfDPSKRISAKDALAHPYL 275
Cdd:cd06632   224 IpDHLSPDAKDFIRLCLQR----DPEDRPTASQLLEHPFV 259
STKc_Chk1 cd14069
Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the ...
5-275 7.13e-29

Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chk1 is implicated in many major checkpoints of the cell cycle, providing a link between upstream sensors and the cell cycle engine. It plays an important role in DNA damage response and maintaining genomic stability. Chk1 acts as an effector of the sensor kinase, ATR (ATM and Rad3-related), a member of the PI3K family, which is activated upon DNA replication stress. Chk1 delays mitotic entry in response to replication blocks by inhibiting cyclin dependent kinase (Cdk) activity. In addition, Chk1 contributes to the function of centrosome and spindle-based checkpoints, inhibits firing of origins of DNA replication (Ori), and represses transcription of cell cycle proteins including cyclin B and Cdk1. The Chk1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270971 [Multi-domain]  Cd Length: 261  Bit Score: 112.81  E-value: 7.13e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMpnvfqNLVSCKRVFRE--------LKMLcffKHDNVLSALDILQPPHIdyfeeIYVVTELMQS-DLH 75
Cdd:cd14069    22 NRNTEEAVAVKFV-----DMKRAPGDCPEnikkevciQKML---SHKNVVRFYGHRREGEF-----QYLFLEYASGgELF 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV-EELDESRHMTQEVVTQYY 154
Cdd:cd14069    89 DKIEPDVGMPEDVAQFYFQQLMAGLKYLHSCGITHRDIKPENLLLDENDNLKISDFGLATVfRYKGKERLLNKMCGTLPY 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMGSRHYSNAIDIWSVGCI-FAELLGRRILFQAQSPIQQ-LDLITDllgtpsleamrtacegakahilrgphKQP 232
Cdd:cd14069   169 VAPELLAKKKYRAEPVDVWSCGIVlFAMLAGELPWDQPSDSCQEySDWKEN--------------------------KKT 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1907080392 233 SLPVLYTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14069   223 YLTPWKKIDT----AALSLLRKILTENPNKRITIEDIKKHPWY 261
PKc_CLK cd14134
Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases; Dual-specificity ...
58-275 1.01e-28

Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on S/T residues. In Drosophila, the CLK homolog DOA (Darkener of apricot) is essential for embryogenesis and its mutation leads to defects in sexual differentiation, eye formation, and neuronal development. In fission yeast, the CLK homolog Lkh1 is a negative regulator of filamentous growth and asexual flocculation, and is also involved in oxidative stress response. Vertebrates contain mutliple CLK proteins and mammals have four (CLK1-4). The CLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271036 [Multi-domain]  Cd Length: 332  Bit Score: 114.20  E-value: 1.01e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  58 DYFEEIYVVTELMQSDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNS------------ 122
Cdd:cd14134    84 DYRGHMCIVFELLGPSLYDFLKKnnYGPFPLEHVQHIAKQLLEAVAFLHDLKLTHTDLKPENiLLVDSdyvkvynpkkkr 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 123 ------NCVLKICDFGLArveeLDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQ 196
Cdd:cd14134   164 qirvpkSTDIKLIDFGSA----TFDDEYHSSIVSTRHYRAPEVILGLG-WSYPCDVWSIGCILVELYTGELLFQTHDNLE 238
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 197 QLDLITDLLGTPSLEAMRTACEGAK-----AHILRGPHKQPS--------LPVLYTLSSQATH--EAVHLLCRMLVFDPS 261
Cdd:cd14134   239 HLAMMERILGPLPKRMIRRAKKGAKyfyfyHGRLDWPEGSSSgrsikrvcKPLKRLMLLVDPEhrLLFDLIRKMLEYDPS 318
                         250
                  ....*....|....
gi 1907080392 262 KRISAKDALAHPYL 275
Cdd:cd14134   319 KRITAKEALKHPFF 332
STKc_MEKK4 cd06626
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
28-275 1.25e-28

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK4 is a MAPK kinase kinase that phosphorylates and activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270796 [Multi-domain]  Cd Length: 265  Bit Score: 112.40  E-value: 1.25e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSaldilqpphidYF------EEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGL 100
Cdd:cd06626    44 KEIADEMKVLEGLDHPNLVR-----------YYgvevhrEEVYIFMEYCQeGTLEELLRHGRILDEAVIRVYTLQLLEGL 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 101 KYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArVEELDESRHMTQEVV-----TQYYRAPEILMGSR--HYSNAIDIW 173
Cdd:cd06626   113 AYLHENGIVHRDIKPANIFLDSNGLIKLGDFGSA-VKLKNNTTTMAPGEVnslvgTPAYMAPEVITGNKgeGHGRAADIW 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 174 SVGCIFAELL-GRRilfqaqsPIQQLDlitdllgtPSLEAMrtacegakAHIlrGPHKQPSLPVlytlSSQATHEAVHLL 252
Cdd:cd06626   192 SLGCVVLEMAtGKR-------PWSELD--------NEWAIM--------YHV--GMGHKPPIPD----SLQLSPEGKDFL 242
                         250       260
                  ....*....|....*....|...
gi 1907080392 253 CRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06626   243 SRCLESDPKKRPTASELLDHPFI 265
STKc_AMPK_alpha cd14079
Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein ...
9-275 3.20e-28

Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. In response to decreased ATP levels, it enhances energy-producing processes and inhibits energy-consuming pathways. Once activated, AMPK phosphorylates a broad range of downstream targets, with effects in carbohydrate metabolism and uptake, lipid and fatty acid biosynthesis, carbon energy storage, and inflammation, among others. Defects in energy homeostasis underlie many human diseases including Type 2 diabetes, obesity, heart disease, and cancer. As a result, AMPK has emerged as a therapeutic target in the treatment of these diseases. The AMPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270981 [Multi-domain]  Cd Length: 256  Bit Score: 110.82  E-value: 3.20e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALK-----KMpnvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQ 82
Cdd:cd14079    27 GHKVAVKilnrqKI----KSLDMEEKIRREIQILKLFRHPHIIRLYEVIETPT-----DIFMVMEYVSGgELFDYIVQKG 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVVTQYYRAPEILMG 162
Cdd:cd14079    98 RLSEDEARRFFQQIISGVEYCHRHMVVHRDLKPENLLLDSNMNVKIADFGLSNI--MRDGEFLKTSCGSPNYAAPEVISG 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 163 SRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlitdllgTPSLeaMRTACEGakahilrgphkqpslpvLYTLSS 242
Cdd:cd14079   176 KLYAGPEVDVWSCGVILYALLCGSLPFDDEH-------------IPNL--FKKIKSG-----------------IYTIPS 223
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 243 QATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14079   224 HLSPGARDLIKRMLVVDPLKRITIPEIRQHPWF 256
STKc_CNK2-like cd08530
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar ...
8-273 3.60e-28

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. This subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270869 [Multi-domain]  Cd Length: 256  Bit Score: 110.94  E-value: 3.60e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMpNVfQNLVSCKR--VFRELKMLCFFKHDNVlsaldilqpphIDYFE------EIYVVTELMQ-SDLHKII 78
Cdd:cd08530    24 DNQVYALKEV-NL-GSLSQKERedSVNEIRLLASVNHPNI-----------IRYKEafldgnRLCIVMEYAPfGDLSKLI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQ----PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeldESRHMTQEVV-TQY 153
Cdd:cd08530    91 SKRKkkrrLFPEDDIWRIFIQMLRGLKALHDQKILHRDLKSANILLSAGDLVKIGDLGISKV----LKKNLAKTQIgTPL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 YRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSpIQQLDLitdllgtpsleamrtacegakaHILRGphKQPS 233
Cdd:cd08530   167 YAAPEVWKG-RPYDYKSDIWSLGCLLYEMATFRPPFEART-MQELRY----------------------KVCRG--KFPP 220
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 234 LPVLYtlsSQATHEAVHllcRMLVFDPSKRISAKDALAHP 273
Cdd:cd08530   221 IPPVY---SQDLQQIIR---SLLQVNPKKRPSCDKLLQSP 254
STKc_AGC cd05123
Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
61-274 6.17e-28

Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. The AGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase.


Pssm-ID: 270693 [Multi-domain]  Cd Length: 250  Bit Score: 109.91  E-value: 6.17e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEEL 139
Cdd:cd05123    66 EKLYLVLDYVPGgELFSHLSKEGRFPEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDSDGHIKLTDFGLAK-ELS 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 140 DESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPiqqlDLITDLlgtpsleamrtaceg 219
Cdd:cd05123   145 SDGDRTYTFCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAENR----KEIYEK--------------- 204
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 220 akahILRGPHKQPSlpvlyTLSSqathEAVHLLCRMLVFDPSKRISAKDA---LAHPY 274
Cdd:cd05123   205 ----ILKSPLKFPE-----YVSP----EAKSLISGLLQKDPTKRLGSGGAeeiKAHPF 249
STKc_ULK1 cd14202
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the ...
32-276 1.70e-27

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. It associates with three autophagy-related proteins (Atg13, FIP200 amd Atg101) to form the ULK1 complex. All fours proteins are essential for autophagosome formation. ULK1 is regulated by both mammalian target-of rapamycin complex 1 (mTORC1) and AMP-activated protein kinase (AMPK). mTORC1 negatively regulates the ULK1 complex in a nutrient-dependent manner while AMPK stimulates autophagy by inhibiting mTORC1. ULK1 also plays neuron-specific roles and is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, neurite extension, and axon branching. The ULK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271104 [Multi-domain]  Cd Length: 267  Bit Score: 109.33  E-value: 1.70e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDilqpphidyFEEI----YVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd14202    50 KEIKILKELKHENIVALYD---------FQEIansvYLVMEYCNGgDLADYLHTMRTLSEDTIRLFLQQIAGAMKMLHSK 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 GILHRDIKPGNLLVN---------SNCVLKICDFGLARVEeldESRHMTQEVV-TQYYRAPEILMgSRHYSNAIDIWSVG 176
Cdd:cd14202   121 GIIHRDLKPQNILLSysggrksnpNNIRIKIADFGFARYL---QNNMMAATLCgSPMYMAPEVIM-SQHYDAKADLWSIG 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 177 CIFAELLGRRILFQAQSPiQQLDLITDllgtpsleamrtacegakahilRGPHKQPSLPvlytlsSQATHEAVHLLCRML 256
Cdd:cd14202   197 TIIYQCLTGKAPFQASSP-QDLRLFYE----------------------KNKSLSPNIP------RETSSHLRQLLLGLL 247
                         250       260
                  ....*....|....*....|
gi 1907080392 257 VFDPSKRISAKDALAHPYLD 276
Cdd:cd14202   248 QRNQKDRMDFDEFFHHPFLD 267
STKc_MLCK-like cd14006
Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs ...
28-274 2.13e-27

Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This family is composed of MLCKs and related MLCK-like kinase domains from giant STKs such as titin, obscurin, SPEG, Unc-89, Trio, kalirin, and Twitchin. Also included in this family are Death-Associated Protein Kinases (DAPKs) and Death-associated protein kinase-Related Apoptosis-inducing protein Kinase (DRAKs). MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. Titin, obscurin, Twitchin, and SPEG are muscle proteins involved in the contractile apparatus. The giant STKs are multidomain proteins containing immunoglobulin (Ig), fibronectin type III (FN3), SH3, RhoGEF, PH and kinase domains. Titin, obscurin, Twitchin, and SPEG contain many Ig domain repeats at the N-terminus, while Trio and Kalirin contain spectrin-like repeats. The MLCK-like family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270908 [Multi-domain]  Cd Length: 247  Bit Score: 108.51  E-value: 2.13e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd14006    34 EAVLREISILNQLQHPRIIQLHEAYESP-----TELVLILELCSGgELLDRLAERGSLSEEEVRTYMRQLLEGLQYLHNH 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 GILHRDIKPGNLLVNSNCV--LKICDFGLAR-VEELDESRHMTQevvTQYYRAPEILMGSrHYSNAIDIWSVGCIfaell 183
Cdd:cd14006   109 HILHLDLKPENILLADRPSpqIKIIDFGLARkLNPGEELKEIFG---TPEFVAPEIVNGE-PVSLATDMWSIGVL----- 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 184 gRRILFQAQSPiqqldlitdLLGtpslEAMRTACEGAKAhilrgphkqpslpVLYTLS----SQATHEAVHLLCRMLVFD 259
Cdd:cd14006   180 -TYVLLSGLSP---------FLG----EDDQETLANISA-------------CRVDFSeeyfSSVSQEAKDFIRKLLVKE 232
                         250
                  ....*....|....*
gi 1907080392 260 PSKRISAKDALAHPY 274
Cdd:cd14006   233 PRKRPTAQEALQHPW 247
STKc_Rim15_like cd05611
Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the ...
58-274 4.26e-27

Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. The Rim15-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270762 [Multi-domain]  Cd Length: 263  Bit Score: 107.95  E-value: 4.26e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  58 DYfeeIYVVTE-LMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV 136
Cdd:cd05611    70 DY---LYLVMEyLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRN 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 137 EEldESRHMTQEVVTQYYRAPEILMGSRHySNAIDIWSVGCIFAELLgrrilfqaqspiqqldlitdlLGTPSLEAmrTA 216
Cdd:cd05611   147 GL--EKRHNKKFVGTPDYLAPETILGVGD-DKMSDWWSLGCVIFEFL---------------------FGYPPFHA--ET 200
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 217 CEGAKAHILRGPHKQPSLPVLYtlssqATHEAVHLLCRMLVFDPSKRISAKDAL---AHPY 274
Cdd:cd05611   201 PDAVFDNILSRRINWPEEVKEF-----CSPEAVDLINRLLCMDPAKRLGANGYQeikSHPF 256
TyrKc smart00219
Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.
12-183 4.49e-27

Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.


Pssm-ID: 197581 [Multi-domain]  Cd Length: 257  Bit Score: 107.62  E-value: 4.49e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   12 VALKKMPNVfQNLVSCKRVFRELKMLCFFKHDNVLSAL-DILQPphidyfEEIYVVTELMQS-DLHKIIVSPQP-LSSDH 88
Cdd:smart00219  31 VAVKTLKED-ASEQQIEEFLREARIMRKLDHPNVVKLLgVCTEE------EPLYIVMEYMEGgDLLSYLRKNRPkLSLSD 103
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDEsrhmtqevvtqYYR-----------AP 157
Cdd:smart00219 104 LLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD-----------YYRkrggklpirwmAP 172
                          170       180
                   ....*....|....*....|....*.
gi 1907080392  158 EILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:smart00219 173 ESLK-EGKFTSKSDVWSFGVLLWEIF 197
STYKc smart00221
Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class ...
12-183 6.54e-27

Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.


Pssm-ID: 214568 [Multi-domain]  Cd Length: 258  Bit Score: 107.25  E-value: 6.54e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   12 VALKKMPNVfQNLVSCKRVFRELKMLCFFKHDNVLSAL-DILQPphidyfEEIYVVTELMQS-DLHKIIVSPQP--LSSD 87
Cdd:smart00221  31 VAVKTLKED-ASEQQIEEFLREARIMRKLDHPNIVKLLgVCTEE------EPLMIVMEYMPGgDLLDYLRKNRPkeLSLS 103
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMgSRHYS 167
Cdd:smart00221 104 DLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLK-EGKFT 182
                          170
                   ....*....|....*.
gi 1907080392  168 NAIDIWSVGCIFAELL 183
Cdd:smart00221 183 SKSDVWSFGVLLWEIF 198
STKc_PAK_II cd06648
Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze ...
4-275 9.66e-27

Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270815 [Multi-domain]  Cd Length: 261  Bit Score: 107.14  E-value: 9.66e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMpnvfqNLVSCKR---VFRELKMLCFFKHDNVLSALDilqpphiDYF--EEIYVVTELMQSDLHKII 78
Cdd:cd06648    27 TDKSTGRQVAVKKM-----DLRKQQRrelLFNEVVIMRDYQHPNIVEMYS-------SYLvgDELWVVMEFLEGGALTDI 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGL-ARV-EELDESRHMtqeVVTQYYRA 156
Cdd:cd06648    95 VTHTRMNEEQIATVCRAVLKALSFLHSQGVIHRDIKSDSILLTSDGRVKLSDFGFcAQVsKEVPRRKSL---VGTPYWMA 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 157 PEILmgSRH-YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLlgtpsleamrtacegaKAHILRGPHKqpslp 235
Cdd:cd06648   172 PEVI--SRLpYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN----------------EPPKLKNLHK----- 228
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 236 VLYTLSSqatheavhLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06648   229 VSPRLRS--------FLDRMLVRDPAQRATAAELLNHPFL 260
STKc_MST1_2 cd06612
Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; ...
8-275 1.55e-26

Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 and MEKK1 by acting as a MAPK kinase kinase kinase. Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132943 [Multi-domain]  Cd Length: 256  Bit Score: 106.20  E-value: 1.55e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMP--NVFQNLVsckrvfRELKMLCFFKHDNVLSaldilqpphidYFEEIYVVTEL---MQ-------SDLH 75
Cdd:cd06612    27 TGQVVAIKVVPveEDLQEII------KEISILKQCDSPYIVK-----------YYGSYFKNTDLwivMEycgagsvSDIM 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KIIVSPqpLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQYY 154
Cdd:cd06612    90 KITNKT--LTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVS--GQLTDTMAKRNTVIgTPFW 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMGSRhYSNAIDIWSVGCIFAELL-GRRILFQAQsPIQQLDLItdllgtpsleamrtacegakahilrgPHKQPS 233
Cdd:cd06612   166 MAPEVIQEIG-YNNKADIWSLGITAIEMAeGKPPYSDIH-PMRAIFMI--------------------------PNKPPP 217
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1907080392 234 lpvlyTLS--SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06612   218 -----TLSdpEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
STKc_LKB1 cd14119
Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer ...
10-176 1.13e-25

Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LKB1, also called STK11, was first identified as a tumor suppressor responsible for Peutz-Jeghers syndrome, a disorder that leads to an increased risk of spontaneous epithelial cancer. It serves as a master upstream kinase that activates AMP-activated protein kinase (AMPK) and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. To be activated, LKB1 requires the adaptor proteins STe20-Related ADaptor (STRAD) and mouse protein 25 (MO25). The LKB1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271021 [Multi-domain]  Cd Length: 255  Bit Score: 103.88  E-value: 1.13e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPNVFQNlvsckrVFRELKMLCFFKHDNVLSALDILqppHIDYFEEIYVVTELMQSDLHKII-VSPQ---PLS 85
Cdd:cd14119    27 KKRKLRRIPNGEAN------VKREIQILRRLNHRNVIKLVDVL---YNEEKQKLYMVMEYCVGGLQEMLdSAPDkrlPIW 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  86 SDHVkvFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELD---ESRHMTQEVVTQYYRAPEILMG 162
Cdd:cd14119    98 QAHG--YFVQLIDGLEYLHSQGIIHKDIKPGNLLLTTDGTLKISDFGVA--EALDlfaEDDTCTTSQGSPAFQPPEIANG 173
                         170
                  ....*....|....*
gi 1907080392 163 SRHYSN-AIDIWSVG 176
Cdd:cd14119   174 QDSFSGfKVDIWSAG 188
STKc_Byr2_like cd06628
Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein ...
32-275 1.57e-25

Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. The Byr2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270798 [Multi-domain]  Cd Length: 267  Bit Score: 103.77  E-value: 1.57e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDI-LQPPHIDYFEEiYVVTELMQSDLHKIIVSPQPLssdhVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd06628    55 REIALLRELQHENIVQYLGSsSDANHLNIFLE-YVPGGSVATLLNNYGAFEESL----VRNFVRQILKGLNYLHNRGIIH 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNCVLKICDFGLARVEELDE--SRHMTQEVVTQ---YYRAPEILMGSRHYSNAiDIWSVGCIFAEllgr 185
Cdd:cd06628   130 RDIKGANILVDNKGGIKISDFGISKKLEANSlsTKNNGARPSLQgsvFWMAPEVVKQTSYTRKA-DIWSLGCLVVE---- 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 186 riLFQAQSPIqqldlitdllgtPSLEAMRTacegakahILR-GPHKQPSLPvlytlsSQATHEAVHLLCRMLVFDPSKRI 264
Cdd:cd06628   205 --MLTGTHPF------------PDCTQMQA--------IFKiGENASPTIP------SNISSEARDFLEKTFEIDHNKRP 256
                         250
                  ....*....|.
gi 1907080392 265 SAKDALAHPYL 275
Cdd:cd06628   257 TADELLKHPFL 267
STKc_IRE1 cd13982
Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze ...
8-274 2.43e-25

Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), is an ER-localized type I transmembrane protein with kinase and endoribonuclease domains in the cytoplasmic side. It acts as an ER stress sensor and is the oldest and most conserved component of the unfolded protein response (UPR) in eukaryotes. The UPR is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. During ER stress, IRE1 dimerizes and forms oligomers, allowing the kinase domain to undergo trans-autophosphorylation. This leads to a conformational change that stimulates its endoribonuclease activity and results in the cleavage of its mRNA substrate, HAC1 in yeast and XBP1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. Mammals contain two IRE1 proteins, IRE1alpha (or ERN1) and IRE1beta (or ERN2). The Ire1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270884 [Multi-domain]  Cd Length: 269  Bit Score: 103.51  E-value: 2.43e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMpnvfqnLVSCKRV-FRELKMLCFF-KHDNVlsaldilqpphIDYF--EE----IYVVTELMQSDLHKIIV 79
Cdd:cd13982    24 DGRPVAVKRL------LPEFFDFaDREVQLLRESdEHPNV-----------IRYFctEKdrqfLYIALELCAASLQDLVE 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVF-----LYQILRGLKYLHSAGILHRDIKPGNLLV----NSNCV-LKICDFGLARVEELDES--RHMTQ 147
Cdd:cd13982    87 SPRESKLFLRPGLepvrlLRQIASGLAHLHSLNIVHRDLKPQNILIstpnAHGNVrAMISDFGLCKKLDVGRSsfSRRSG 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 148 EVVTQYYRAPEILMGS--RHYSNAIDIWSVGCIFAELL-------GRRilFQAQspiqqldlitdllgtpsleamrtace 218
Cdd:cd13982   167 VAGTSGWIAPEMLSGStkRRQTRAVDIFSLGCVFYYVLsggshpfGDK--LERE-------------------------- 218
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392 219 gakAHILRGPHkqpSLPVLYTLSSQAtHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd13982   219 ---ANILKGKY---SLDKLLSLGEHG-PEAQDLIERMIDFDPEKRPSAEEVLNHPF 267
STKc_TSSK-like cd14080
Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs ...
4-275 5.75e-25

Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. TSSK6, also called SSTK, is expressed at the head of elongated sperm. TSSK1/TSSK2 double knock-out and TSSK6 null mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270982 [Multi-domain]  Cd Length: 262  Bit Score: 102.26  E-value: 5.75e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALK-----KMPNVFQNlvscKRVFRELKMLCFFKHDNVLSALDILQpphidYFEEIYVVTELM-QSDLHKI 77
Cdd:cd14080    22 TKSGLKEKVACKiidkkKAPKDFLE----KFLPRELEILRKLRHPNIIQVYSIFE-----RGSKVFIFMEYAeHGDLLEY 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQevvtQY---- 153
Cdd:cd14080    93 IQKRGALSESQARIWFRQLALAVQYLHSLDIAHRDLKCENILLDSNNNVKLSDFGFARLCPDDDGDVLSK----TFcgsa 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 -YRAPEILMGSRHYSNAIDIWSVGCIFAellgrrILFQAQSPIQQLDlITDLLgtpsleamrtacegaKAHILRGPHKQP 232
Cdd:cd14080   169 aYAAPEILQGIPYDPKKYDIWSLGVILY------IMLCGSMPFDDSN-IKKML---------------KDQQNRKVRFPS 226
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1907080392 233 SLPVLytlssqaTHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14080   227 SVKKL-------SPECKDLIDQLLEPDPTKRATIEEILNHPWL 262
STKc_PhKG cd14093
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs ...
55-275 7.93e-25

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). Each subunit has tissue-specific isoforms or splice variants. Vertebrates contain two isoforms of the gamma subunit (gamma 1 and gamma 2). The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270995 [Multi-domain]  Cd Length: 272  Bit Score: 102.05  E-value: 7.93e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  55 PHI----DYFEE---IYVVTELM-QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVL 126
Cdd:cd14093    69 PNIielhDVFESptfIFLVFELCrKGELFDYLTEVVTLSEKKTRRIMRQLFEAVEFLHSLNIVHRDLKPENILLDDNLNV 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 127 KICDFGLARveELDESRHMTQEVVTQYYRAPEIL---MGSRH--YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 201
Cdd:cd14093   149 KISDFGFAT--RLDEGEKLRELCGTPGYLAPEVLkcsMYDNApgYGKEVDMWACGVIMYTLLAGCPPFWHRKQMVMLRNI 226
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 202 TdllgtpsleamrtacEGAkahilrgphkqpslpvlYTLSS----QATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14093   227 M---------------EGK-----------------YEFGSpewdDISDTAKDLISKLLVVDPKKRLTAEEALEHPFF 272
PKc_DYRK1 cd14226
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
89-275 1.15e-24

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. Mammals contain two types of DYRK1 proteins, DYRK1A and DYRK1B. DYRK1A was previously called minibrain kinase homolog (MNBH) or dual-specificity YAK1-related kinase. It phosphorylates various substrates and is involved in many cellular events. It phosphorylates and inhibits the transcription factors, nuclear factor of activated T cells (NFAT) and forkhead in rhabdomyosarcoma (FKHR). It regulates neuronal differentiation by targetting CREB (cAMP response element-binding protein). It also targets many endocytic proteins including dynamin and amphiphysin and may play a role in the endocytic pathway. The gene encoding DYRK1A is located in the DSCR (Down syndrome critical region) of human chromosome 21 and DYRK1A has been implicated in the pathogenesis of DS. DYRK1B, also called minibrain-related kinase (MIRK), is highly expressed in muscle and plays a critical role in muscle differentiation by regulating transcription, cell motility, survival, and cell cycle progression. It is overexpressed in many solid tumors where it acts as a tumor survival factor. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. The DYRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271128 [Multi-domain]  Cd Length: 339  Bit Score: 102.78  E-value: 1.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLYQILRGLKYLHSA--GILHRDIKPGN-LLVNSN-CVLKICDFGLArveeLDESRHMTQEVVTQYYRAPEILMGSR 164
Cdd:cd14226   118 TRKFAQQLCTALLFLSTPelSIIHCDLKPENiLLCNPKrSAIKIIDFGSS----CQLGQRIYQYIQSRFYRSPEVLLGLP 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 hYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAK-------------AHILRGPHKQ 231
Cdd:cd14226   194 -YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGMPPVHMLDQAPKARKffeklpdgtyylkKTKDGKKYKP 272
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907080392 232 PSLPVLYTLSSQATH--------EAVH----------LLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14226   273 PGSRKLHEILGVETGgpggrragEPGHtvedylkfkdLILRMLDYDPKTRITPAEALQHSFF 334
STKc_Kin1_2 cd14077
Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the ...
3-275 1.62e-24

Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of yeast Kin1, Kin2, and similar proteins. Fission yeast Kin1 is a membrane-associated kinase that is involved in regulating cell surface cohesiveness during interphase. It also plays a role during mitosis, linking actomyosin ring assembly with septum synthesis and membrane closure to ensure separation of daughter cells. Budding yeast Kin1 and Kin2 act downstream of the Rab-GTPase Sec4 and are associated with the exocytic apparatus; they play roles in the secretory pathway. The Kin1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270979 [Multi-domain]  Cd Length: 267  Bit Score: 100.98  E-value: 1.62e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVFQNL------------VSC-KRVFRELKMLCFFKHDNVLSALDILQPPHIDY--FEeiYVvt 67
Cdd:cd14077    20 AKHIRTGEKCAIKIIPRASNAGlkkerekrlekeISRdIRTIREAALSSLLNHPHICRLRDFLRTPNHYYmlFE--YV-- 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  68 elMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQ 147
Cdd:cd14077    96 --DGGQLLDYIISHGKLKEKQARKFARQIASALDYLHRNSIVHRDLKIENILISKSGNIKIIDFGLSNL--YDPRRLLRT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 148 EVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlitdllgTPSLEamrtacegakAHILRG 227
Cdd:cd14077   172 FCGSLYFAAPELLQAQPYTGPEVDVWSFGVVLYVLVCGKVPFDDEN-------------MPALH----------AKIKKG 228
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1907080392 228 PHKQPSlpvlyTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14077   229 KVEYPS-----YLSS----ECKSLISRMLVVDPKKRATLEQVLNHPWM 267
STKc_PLK3 cd14189
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the ...
52-275 1.63e-24

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK3, also called Prk or Fnk (FGF-inducible kinase), regulates angiogenesis and responses to DNA damage. Activated PLK3 mediates Chk2 phosphorylation by ATM and the resulting checkpoint activation. PLK3 phosphorylates DNA polymerase delta and may be involved in DNA repair. It also inhibits Cdc25c, thereby regulating the onset of mitosis. The PLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271091 [Multi-domain]  Cd Length: 255  Bit Score: 100.77  E-value: 1.63e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  52 LQPPHI----DYFEE---IYVVTELM-QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN 123
Cdd:cd14189    58 LHHKHVvkfsHHFEDaenIYIFLELCsRKSLAHIWKARHTLLEPEVRYYLKQIISGLKYLHLKGILHRDLKLGNFFINEN 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 124 CVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMGSRHYSNAiDIWSVGCIFAELLGrrilfqAQSPIQQLDLitd 203
Cdd:cd14189   138 MELKVGDFGLAARLEPPEQRKKTI-CGTPNYLAPEVLLRQGHGPES-DVWSLGCVMYTLLC------GNPPFETLDL--- 206
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907080392 204 llgtpsLEAMRTAcegakahilrgphKQpslpVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14189   207 ------KETYRCI-------------KQ----VKYTLPASLSLPARHLLAGILKRNPGDRLTLDQILEHEFF 255
STKc_SnRK3 cd14663
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
9-274 2.13e-24

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK3 is represented in this cd. The SnRK3 group contains members also known as CBL-interacting protein kinase, salt overly sensitive 2, SOS3-interacting proteins and protein kinase S. These kinases interact with calcium-binding proteins such as SOS3, SCaBPs, and CBL proteins, and are involved in responses to salt stress and in sugar and ABA signaling. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271133 [Multi-domain]  Cd Length: 256  Bit Score: 100.56  E-value: 2.13e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALK---KMPNVFQNLVscKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQ-SDLHKIIVSPQPL 84
Cdd:cd14663    25 GESVAIKiidKEQVAREGMV--EQIKREIAIMKLLRHPNIVELHEVMATK-----TKIFFVMELVTgGELFSKIAKNGRL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-TQYYRAPEILmGS 163
Cdd:cd14663    98 KEDKARKYFQQLIDAVDYCHSRGVFHRDLKPENLLLDEDGNLKISDFGLSALSEQFRQDGLLHTTCgTPNYVAPEVL-AR 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 164 RHYSNAI-DIWSVGCIFAELLGRRILFQAqspiqqldlitdllgtPSLEAM-RTACEGAkahilrgphkqpslpvlYTLS 241
Cdd:cd14663   177 RGYDGAKaDIWSCGVILFVLLAGYLPFDD----------------ENLMALyRKIMKGE-----------------FEYP 223
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14663   224 RWFSPGAKSLIKRILDPNPSTRITVEQIMASPW 256
STKc_PLK4 cd14186
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the ...
28-275 2.60e-24

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK4, also called SAK or STK18, is structurally different from other PLKs in that it contains only one polo box that can form two adjacent polo boxes and a functional PDB by homodimerization. It is required for late mitotic progression, cell survival, and embryonic development. It localizes to centrosomes and is required for centriole duplication and chromosomal stability. Overexpression of PLK4 may be associated with colon tumors. The PLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271088 [Multi-domain]  Cd Length: 256  Bit Score: 100.32  E-value: 2.60e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDilqpphidYFEE---IYVVTELMQS-DLHKIIVS-PQPLSSDHVKVFLYQILRGLKY 102
Cdd:cd14186    46 QRVRNEVEIHCQLKHPSILELYN--------YFEDsnyVYLVLEMCHNgEMSRYLKNrKKPFTEDEARHFMHQIVTGMLY 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMGSRHYSNAiDIWSVGCIFAEL 182
Cdd:cd14186   118 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHFTM-CGTPNYISPEIATRSAHGLES-DVWSLGCMFYTL 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 183 LGRRILFQAQSPIQQLDLItdLLGTpsleamrtacegakahilrgphkqpslpvlYTLSSQATHEAVHLLCRMLVFDPSK 262
Cdd:cd14186   196 LVGRPPFDTDTVKNTLNKV--VLAD------------------------------YEMPAFLSREAQDLIHQLLRKNPAD 243
                         250
                  ....*....|...
gi 1907080392 263 RISAKDALAHPYL 275
Cdd:cd14186   244 RLSLSSVLDHPFM 256
STKc_Bck1_like cd06629
Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein ...
83-275 2.66e-24

Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The Bck1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270799 [Multi-domain]  Cd Length: 270  Bit Score: 100.53  E-value: 2.66e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE----LDESRHMTQEVvtqYYRAPE 158
Cdd:cd06629   104 KFEEDLVRFFTRQILDGLAYLHSKGILHRDLKADNILVDLEGICKISDFGISKKSDdiygNNGATSMQGSV---FWMAPE 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGSRH-YSNAIDIWSVGCIFAELL-GRRilfqaqsPIQQLDLITDLLgtpSLEAMRTAcegakahilrgphkqPSLPV 236
Cdd:cd06629   181 VIHSQGQgYSAKVDIWSLGCVVLEMLaGRR-------PWSDDEAIAAMF---KLGNKRSA---------------PPVPE 235
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1907080392 237 LYTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06629   236 DVNLSP----EALDFLNACFAIDPRDRPTAAELLSHPFL 270
STKc_EIF2AK cd13996
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
8-183 5.54e-24

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: General Control Non-derepressible-2 (GCN2) which is activated during amino acid or serum starvation; protein kinase regulated by RNA (PKR) which is activated by double stranded RNA; heme-regulated inhibitor kinase (HRI) which is activated under heme-deficient conditions; and PKR-like endoplasmic reticulum kinase (PERK) which is activated when misfolded proteins accumulate in the ER. The EIF2AK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270898 [Multi-domain]  Cd Length: 273  Bit Score: 99.67  E-value: 5.54e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNlVSCKRVFRELKMLCFFKHDNVlsaldilqpphIDYF----EEIYVVTElMQ----SDLHKIIV 79
Cdd:cd13996    30 DGVTYAIKKIRLTEKS-SASEKVLREVKALAKLNHPNI-----------VRYYtawvEEPPLYIQ-MElcegGTLRDWID 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFL---YQILRGLKYLHSAGILHRDIKPGNLLVNSNC-VLKICDFGLAR-VEELDESRH---------- 144
Cdd:cd13996    97 RRNSSSKNDRKLALelfKQILKGVSYIHSKGIVHRDLKPSNIFLDNDDlQVKIGDFGLATsIGNQKRELNnlnnnnngnt 176
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 145 --MTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELL 183
Cdd:cd13996   177 snNSVGIGTPLYASPEQLDGE-NYNEKADIYSLGIILFEML 216
STKc_ULK3 cd14121
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the ...
43-274 5.56e-24

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK3 mRNA is up-regulated in fibroblasts after Ras-induced senescence, and its overexpression induces both autophagy and senescence in a fibroblast cell line. ULK3, through its kinase activity, positively regulates Gli proteins, mediators of the Sonic hedgehog (Shh) signaling pathway that is implicated in tissue homeostasis maintenance and neurogenesis. It is inhibited by binding to Suppressor of Fused (Sufu). The ULK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271023 [Multi-domain]  Cd Length: 252  Bit Score: 99.28  E-value: 5.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  43 DNVLSALDILQP---PHI----DYF---EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd14121    40 ENLLTEIELLKKlkhPHIvelkDFQwdeEHIYLIMEYCSGgDLSRFIRSRRTLPESTVRRFLQQLASALQFLREHNISHM 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLVNS--NCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILF 189
Cdd:cd14121   120 DLKPQNLLLSSryNPVLKLADFGFA--QHLKPNDEAHSLRGSPLYMAPEMIL-KKKYDARVDLWSVGVILYECLFGRAPF 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 190 qAQSPIQQLdlitdllgtpsLEAMRTAcegakahilrGPHKQPSLPVLytlsSQATHEavhLLCRMLVFDPSKRISAKDA 269
Cdd:cd14121   197 -ASRSFEEL-----------EEKIRSS----------KPIEIPTRPEL----SADCRD---LLLRLLQRDPDRRISFEEF 247

                  ....*
gi 1907080392 270 LAHPY 274
Cdd:cd14121   248 FAHPF 252
STKc_ULK2 cd14201
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the ...
32-276 9.72e-24

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK2 is ubiquitously expressed and is essential in autophagy induction. It displays partially redundant functions with ULK1 and is able to compensate for the loss of ULK1 in non-selective autophagy. It also displays neuron-specific functions and is important in axon development. The ULK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271103 [Multi-domain]  Cd Length: 271  Bit Score: 98.93  E-value: 9.72e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd14201    54 KEIKILKELQHENIVALYDVQEMPN-----SVFLVMEYCNGgDLADYLQAKGTLSEDTIRVFLQQIAAAMRILHSKGIIH 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVN---------SNCVLKICDFGLARVEeldESRHMTQEVV-TQYYRAPEILMgSRHYSNAIDIWSVGCIFA 180
Cdd:cd14201   129 RDLKPQNILLSyasrkkssvSGIRIKIADFGFARYL---QSNMMAATLCgSPMYMAPEVIM-SQHYDAKADLWSIGTVIY 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 181 ELLGRRILFQAQSPiQQLDLITDllgtpsleamrtacegakahilRGPHKQPSLPvlytlsSQATHEAVHLLCRMLVFDP 260
Cdd:cd14201   205 QCLVGKPPFQANSP-QDLRMFYE----------------------KNKNLQPSIP------RETSPYLADLLLGLLQRNQ 255
                         250
                  ....*....|....*.
gi 1907080392 261 SKRISAKDALAHPYLD 276
Cdd:cd14201   256 KDRMDFEAFFSHPFLE 271
STKc_Nek2 cd08217
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
7-275 1.61e-23

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Nek2 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. It The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270857 [Multi-domain]  Cd Length: 265  Bit Score: 98.38  E-value: 1.61e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKM------PNVFQNLVSCKRVFRELKmlcffkHDNVLSALD-ILQPPHidyfEEIYVVTELMQS-DLHKII 78
Cdd:cd08217    23 SDGKILVWKEIdygkmsEKEKQQLVSEVNILRELK------HPNIVRYYDrIVDRAN----TTLYIVMEYCEGgDLAQLI 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VS----PQPLSSDHVKVFLYQILRGLKYLHSAG-----ILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEV 149
Cdd:cd08217    93 KKckkeNQYIPEEFIWKIFTQLLLALYECHNRSvgggkILHRDLKPANIFLDSDNNVKLGDFGLARV--LSHDSSFAKTY 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 150 V-TQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSpiqQLDLITDLlgtpsleamrtaCEGakahilrgp 228
Cdd:cd08217   171 VgTPYYMSPELLNEQS-YDEKSDIWSLGCLIYELCALHPPFQAAN---QLELAKKI------------KEG--------- 225
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1907080392 229 hKQPSLPVLYtlsSQATHEAVHllcRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd08217   226 -KFPRIPSRY---SSELNEVIK---SMLNVDPDKRPSVEELLQLPLI 265
STKc_RCK1-like cd14096
Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the ...
2-275 1.74e-23

Catalytic domain of RCK1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal STKs including Saccharomyces cerevisiae RCK1 and RCK2, Schizosaccharomyces pombe Sty1-regulated kinase 1 (Srk1), and similar proteins. RCK1, RCK2 (or Rck2p), and Srk1 are MAPK-activated protein kinases. RCK1 and RCK2 are involved in oxidative and metal stress resistance in budding yeast. RCK2 also regulates rapamycin sensitivity in both S. cerevisiae and Candida albicans. Srk1 is activated by Sty1/Spc1 and is involved in negatively regulating cell cycle progression by inhibiting Cdc25. The RCK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270998 [Multi-domain]  Cd Length: 295  Bit Score: 98.66  E-value: 1.74e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALK-----KMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLH 75
Cdd:cd14096    20 AVPLRNTGKPVAIKvvrkaDLSSDNLKGSSRANILKEVQIMKRLSHPNIVKLLDFQESD-----EYYYIVLELADGgEIF 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL-------------------------------VNSNC 124
Cdd:cd14096    95 HQIVRLTYFSEDLSRHVITQVASAVKYLHEIGVVHRDIKPENLLfepipfipsivklrkadddetkvdegefipgVGGGG 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 125 V--LKICDFGLARVeeLDESRHMTqEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIfaellgrrilfqaqspiqqldLIT 202
Cdd:cd14096   175 IgiVKLADFGLSKQ--VWDSNTKT-PCGTVGYTAPEVVK-DERYSKKVDMWALGCV---------------------LYT 229
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907080392 203 DLLGTPSL--EAMRTACEgakaHILRGPHKqpslpVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14096   230 LLCGFPPFydESIETLTE----KISRGDYT-----FLSPWWDEISKSAKDLISHLLTVDPAKRYDIDEFLAHPWI 295
PKc_Mps1 cd14131
Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle ...
63-275 1.79e-23

Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK); Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TTK/Mps1 is a spindle checkpoint kinase that was first discovered due to its necessity in centrosome duplication in budding yeast. It was later found to function in the spindle assembly checkpoint, which monitors the proper attachment of chromosomes to the mitotic spindle. In yeast, substrates of Mps1 include the spindle pole body components Spc98p, Spc110p, and Spc42p. The TTK/Mps1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271033 [Multi-domain]  Cd Length: 271  Bit Score: 98.44  E-value: 1.79e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNcvLKICDFGLARVEEL 139
Cdd:cd14131    77 LYMVMECGEIDLATILKKkrPKPIDPNFIRYYWKQMLEAVHTIHEEGIVHSDLKPANfLLVKGR--LKLIDFGIAKAIQN 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 140 DE-SRHMTQEVVTQYYRAPEILMGSRHYSN---------AIDIWSVGCIFAELLGRRILFQA-QSPIQQLDLITDllgtp 208
Cdd:cd14131   155 DTtSIVRDSQVGTLNYMSPEAIKDTSASGEgkpkskigrPSDVWSLGCILYQMVYGKTPFQHiTNPIAKLQAIID----- 229
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 209 sleamrtacegAKAHILRGPHKQPSLpvlytlssqatheaVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14131   230 -----------PNHEIEFPDIPNPDL--------------IDVMKRCLQRDPKKRPSIPELLNHPFL 271
STKc_ASK cd06624
Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs ...
83-275 2.44e-23

Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs) and include ASK1, ASK2, and MAPKKK15. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270794 [Multi-domain]  Cd Length: 268  Bit Score: 97.86  E-value: 2.44e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLY--QILRGLKYLHSAGILHRDIKPGNLLVNS-NCVLKICDFG----LARVEELDESRHMTQEvvtqyYR 155
Cdd:cd06624   102 PLKDNENTIGYYtkQILEGLKYLHDNKIVHRDIKGDNVLVNTySGVVKISDFGtskrLAGINPCTETFTGTLQ-----YM 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 156 APEIL-MGSRHYSNAIDIWSVGCIFAEL-LGRRILFQaqspiqqldlitdlLGTPSLEAMRTACegAKAHilrgphkqPS 233
Cdd:cd06624   177 APEVIdKGQRGYGPPADIWSLGCTIIEMaTGKPPFIE--------------LGEPQAAMFKVGM--FKIH--------PE 232
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 234 LPvlytlsSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06624   233 IP------ESLSEEAKSFILRCFEPDPDKRATASDLLQDPFL 268
PKc_MAPKK cd06605
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase ...
45-275 2.45e-23

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAPK, which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPKK kinase (MAPKKK or MKKK or MAP3K). There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270782 [Multi-domain]  Cd Length: 265  Bit Score: 97.80  E-value: 2.45e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  45 VLSALDILQ----PPHIDYFE------EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA-GILHRD 112
Cdd:cd06605    46 ILRELDVLHkcnsPYIVGFYGafysegDISICMEYMDGgSLDKILKEVGRIPERILGKIAVAVVKGLIYLHEKhKIIHRD 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 113 IKPGNLLVNSNCVLKICDFGLArvEELDESRHMTqEVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAEL-LGR-----R 186
Cdd:cd06605   126 VKPSNILVNSRGQVKLCDFGVS--GQLVDSLAKT-FVGTRSYMAPERISGG-KYTVKSDIWSLGLSLVELaTGRfpyppP 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 187 ILFQAQSPIQQLDLITDllGTPsleamrtacegakahilrgphkqPSLPvlytlSSQATHEAVHLLCRMLVFDPSKRISA 266
Cdd:cd06605   202 NAKPSMMIFELLSYIVD--EPP-----------------------PLLP-----SGKFSPDFQDFVSQCLQKDPTERPSY 251

                  ....*....
gi 1907080392 267 KDALAHPYL 275
Cdd:cd06605   252 KELMEHPFI 260
STKc_Yank1 cd05578
Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the ...
7-275 2.62e-23

Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily contains uncharacterized STKs with similarity to the human protein designated as Yank1 or STK32A. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270730 [Multi-domain]  Cd Length: 257  Bit Score: 97.33  E-value: 2.62e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRV-ALKKMpnvfqNLVSC------KRVFRELKMLCFFKHD---NVLSAL-DIlqpphidyfEEIYVVTELMQS-DL 74
Cdd:cd05578    22 KDTKKMfAMKYM-----NKQKCiekdsvRNVLNELEILQELEHPflvNLWYSFqDE---------EDMYMVVDLLLGgDL 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVVTQYY 154
Cdd:cd05578    88 RYHLQQKVKFSEETVKFYICEIVLALDYLHSKNIIHRDIKPDNILLDEQGHVHITDFNIATK--LTDGTLATSTSGTKPY 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlitdllgtpsleamRTACEGAKAHILRgphKQPSL 234
Cdd:cd05578   166 MAPEVFM-RAGYSFAVDWWSLGVTAYEMLRGKRPYEIHS--------------------RTSIEEIRAKFET---ASVLY 221
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 235 PVLYTLssqathEAVHLLCRMLVFDPSKRISA-KDALAHPYL 275
Cdd:cd05578   222 PAGWSE------EAIDLINKLLERDPQKRLGDlSDLKNHPYF 257
PKc_DYRK4 cd14225
Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and ...
59-275 2.69e-23

Catalytic domain of the protein kinase, Dual-specificity tYrosine-phosphorylated and -Regulated Kinase 4; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. DYRK4 is a testis-specific kinase with restricted expression to postmeiotic spermatids. It may function during spermiogenesis, however, it is not required for male fertility. DYRK4 has also been detected in a human teratocarcinoma cell line induced to produce postmitotic neurons. It may have a role in neuronal differentiation. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. They play important roles in cell proliferation, differentiation, survival, and development. The DYRK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271127 [Multi-domain]  Cd Length: 341  Bit Score: 99.01  E-value: 2.69e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  59 YFEEIYVVT-ELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV--NSNCVLKICDFGl 133
Cdd:cd14225   115 YFRNHLCITfELLGMNLYELIKknNFQGFSLSLIRRFAISLLQCLRLLYRERIIHCDLKPENILLrqRGQSSIKVIDFG- 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 134 arveeldESRHMTQEVVT----QYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS 209
Cdd:cd14225   194 -------SSCYEHQRVYTyiqsRFYRSPEVILGLP-YSMAIDMWSLGCILAELYTGYPLFPGENEVEQLACIMEVLGLPP 265
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 210 LEAMRTA--------CEGAKAHIL--RGPHKQPSLPVLytLSSQATHEAVHL--LCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14225   266 PELIENAqrrrlffdSKGNPRCITnsKGKKRRPNSKDL--ASALKTSDPLFLdfIRRCLEWDPSKRMTPDEALQHEWI 341
STKc_CaMKK1 cd14200
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; ...
24-275 2.83e-23

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK1, also called CaMKK alpha, is involved in the regulation of glucose uptake in skeletal muscles, independently of AMPK and PKB activation. It also play roles in learning and memory. Studies on CaMKK1 knockout mice reveal deficits in fear conditioning. The CaMKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271102 [Multi-domain]  Cd Length: 284  Bit Score: 98.10  E-value: 2.83e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  24 LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDyfeEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYL 103
Cdd:cd14200    64 LAPLERVYQEIAILKKLDHVNIVKLIEVLDDPAED---NLYMVFDLLRKGPVMEVPSDKPFSEDQARLYFRDIVLGIEYL 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 104 HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhMTQEVVTQYYRAPEILMGSRH--YSNAIDIWSVG-CIFA 180
Cdd:cd14200   141 HYQKIVHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAL-LSSTAGTPAFMAPETLSDSGQsfSGKALDVWAMGvTLYC 219
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 181 ELLGRrilfqaqspiqqldlitdllgtpsleamrtaCEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDP 260
Cdd:cd14200   220 FVYGK-------------------------------CPFIDEFILALHNKIKNKPVEFPEEPEISEELKDLILKMLDKNP 268
                         250
                  ....*....|....*
gi 1907080392 261 SKRISAKDALAHPYL 275
Cdd:cd14200   269 ETRITVPEIKVHPWV 283
PK_Tyr_Ser-Thr pfam07714
Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role ...
12-176 4.42e-23

Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyze the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyze the reverse process. Protein kinases fall into three broad classes, characterized with respect to substrate specificity; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.


Pssm-ID: 462242 [Multi-domain]  Cd Length: 258  Bit Score: 96.80  E-value: 4.42e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNVFQNLVScKRVFRELKMLCFFKHDNVLSALDI-LQPphidyfEEIYVVTELMQS-DLHKIIVS-PQPLSSDH 88
Cdd:pfam07714  31 VAVKTLKEGADEEER-EDFLEEASIMKKLDHPNIVKLLGVcTQG------EPLYIVTEYMPGgDLLDFLRKhKRKLTLKD 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPEILMgSRHYS 167
Cdd:pfam07714 104 LLSMALQIAKGMEYLESKNFVHRDLAARNCLVSENLVVKISDFGLSRdIYDDDYYRKRGGGKLPIKWMAPESLK-DGKFT 182

                  ....*....
gi 1907080392 168 NAIDIWSVG 176
Cdd:pfam07714 183 SKSDVWSFG 191
PKc_Pek1_like cd06621
Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
7-275 4.69e-23

Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates Pmk1/Spm1 and is regulated by the MAPKK kinase Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKK kinase Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270793 [Multi-domain]  Cd Length: 287  Bit Score: 97.49  E-value: 4.69e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVL----SALDilqpphiDYFEEIYVVTELMQS----DLHKII 78
Cdd:cd06621    23 RNTKTIFALKTITTDPNPDVQKQILRELEINKSCASPYIVkyygAFLD-------EQDSSIGIAMEYCEGgsldSIYKKV 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHV--KVfLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQeVVTQYYRA 156
Cdd:cd06621    96 KKKGGRIGEKVlgKI-AESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVS--GELVNSLAGTF-TGTSYYMA 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 157 PEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQ--SPIQQLDLITDLLGTPSLEAMrtacegakahilrgphKQPSL 234
Cdd:cd06621   172 PERIQG-GPYSITSDVWSLGLTLLEVAQNRFPFPPEgePPLGPIELLSYIVNMPNPELK----------------DEPEN 234
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 235 PVLYTLSSQatheavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06621   235 GIKWSESFK------DFIEKCLEKDGTRRPGPWQMLAHPWI 269
STKc_myosinIII_N_like cd06608
N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze ...
2-275 4.88e-23

N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), and mitogen-activated protein kinase (MAPK) kinase kinase kinase 4/6. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270785 [Multi-domain]  Cd Length: 275  Bit Score: 96.99  E-value: 4.88e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPNVFQNLVSCKRvfrELKMLCFF-KHDNVLSALDI-LQPPHIDYFEEIYVVTELMQ----SDLH 75
Cdd:cd06608    24 KARHKKTGQLAAIKIMDIIEDEEEEIKL---EINILRKFsNHPNIATFYGAfIKKDPPGGDDQLWLVMEYCGggsvTDLV 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 K-IIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQEVV-TQY 153
Cdd:cd06608   101 KgLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTEEAEVKLVDFGVSA--QLDSTLGRRNTFIgTPY 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 154 YRAPEILMGS----RHYSNAIDIWSVGcIFAellgrrilfqaqspIQQLDlitdllGTPSL---EAMRtacegAKAHILR 226
Cdd:cd06608   179 WMAPEVIACDqqpdASYDARCDVWSLG-ITA--------------IELAD------GKPPLcdmHPMR-----ALFKIPR 232
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 227 GPhkqPSlpvlyTLSSQA--THEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06608   233 NP---PP-----TLKSPEkwSKEFNDFISECLIKNYEQRPFTEELLEHPFI 275
STKc_Nek9 cd08221
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
33-275 7.17e-23

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Nek9 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270860 [Multi-domain]  Cd Length: 256  Bit Score: 96.34  E-value: 7.17e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVlsaldilqpphIDYFEEIYVVTELM-------QSDLH-KIIVSPQPLSSDHVKV-FLYQILRGLKYL 103
Cdd:cd08221    49 EIDILSLLNHDNI-----------ITYYNHFLDGESLFiemeycnGGNLHdKIAQQKNQLFPEEVVLwYLYQIVSAVSHI 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 104 HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVV-TQYYRAPEILMGSRhYSNAIDIWSVGCIFAEL 182
Cdd:cd08221   118 HKAGILHRDIKTLNIFLTKADLVKLGDFGISKV--LDSESSMAESIVgTPYYMSPELVQGVK-YNFKSDIWAVGCVLYEL 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 183 LGRRILFQAQSPiqqLDLITDllgtpsleamrtacegakahILRGPHKQpslpvlytLSSQATHEAVHLLCRMLVFDPSK 262
Cdd:cd08221   195 LTLKRTFDATNP---LRLAVK--------------------IVQGEYED--------IDEQYSEEIIQLVHDCLHQDPED 243
                         250
                  ....*....|...
gi 1907080392 263 RISAKDALAHPYL 275
Cdd:cd08221   244 RPTAEELLERPLL 256
STKc_FA2-like cd08529
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar ...
8-275 9.41e-23

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily contains FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270868 [Multi-domain]  Cd Length: 256  Bit Score: 95.94  E-value: 9.41e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSaldilqppHIDYFEE---IYVVTELMQS-DLHKIIVSP-- 81
Cdd:cd08529    24 DGRVYALKQIDISRMSRKMREEAIDEARVLSKLNSPYVIK--------YYDSFVDkgkLNIVMEYAENgDLHSLIKSQrg 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVV-TQYYRAPEiL 160
Cdd:cd08529    96 RPLPEDQIWKFFIQTLLGLSHLHSKKILHRDIKSMNIFLDKGDNVKIGDLGVAKI--LSDTTNFAQTIVgTPYYLSPE-L 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqQLDLITdllgtpsleamrtacegakaHILRGPHKqpslPVlytl 240
Cdd:cd08529   173 CEDKPYNEKSDVWALGCVLYELCTGKHPFEAQN---QGALIL--------------------KIVRGKYP----PI---- 221
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1907080392 241 SSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd08529   222 SASYSQDLSQLIDSCLTKDYRQRPDTTELLRNPSL 256
STKc_OSR1_SPAK cd06610
Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and ...
9-274 1.28e-22

Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270787 [Multi-domain]  Cd Length: 267  Bit Score: 95.89  E-value: 1.28e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpNVFQNLVSCKRVFRELKMLCFFKHDNVLSAldilqppHIDYFE--EIYVVTELMQS----DLHKIIVSPQ 82
Cdd:cd06610    26 KEKVAIKRI-DLEKCQTSMDELRKEIQAMSQCNHPNVVSY-------YTSFVVgdELWLVMPLLSGgsllDIMKSSYPRG 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQEVV-TQYYRAPEI 159
Cdd:cd06610    98 GLDEAIIATVLKEVLKGLEYLHSNGQIHRDVKAGNILLGEDGSVKIADFGVSAslATGGDRTRKVRKTFVgTPCWMAPEV 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLItdLLGTPsleamrtacegakahilrgphkqPSLP--VL 237
Cdd:cd06610   178 MEQVRGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLT--LQNDP-----------------------PSLEtgAD 232
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1907080392 238 YTLSSQATHEAVHlLCrmLVFDPSKRISAKDALAHPY 274
Cdd:cd06610   233 YKKYSKSFRKMIS-LC--LQKDPSKRPTAEELLKHKF 266
STKc_Nek11 cd08222
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
44-275 1.87e-22

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 11; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270861 [Multi-domain]  Cd Length: 260  Bit Score: 95.18  E-value: 1.87e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  44 NVLSALDilqPPHIDYFEEIYV-------VTELMQS-DLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd08222    54 KLLSKLD---HPAIVKFHDSFVekesfciVTEYCEGgDLDDKISeykkSGTTIDENQILDWFIQLLLAVQYMHERRILHR 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLVNSNcVLKICDFGLARVeELDESRHMTQEVVTQYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQA 191
Cdd:cd08222   131 DLKAKNIFLKNN-VIKVGDFGISRI-LMGTSDLATTFTGTPYYMSPEVLKH-EGYNSKSDIWSLGCILYEMCCLKHAFDG 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 192 QSpiqqldlitdllgtpSLEAMRTACEGakahilrgphKQPSLPVLYTLSSQAtheavhLLCRMLVFDPSKRISAKDALA 271
Cdd:cd08222   208 QN---------------LLSVMYKIVEG----------ETPSLPDKYSKELNA------IYSRMLNKDPALRPSAAEILK 256

                  ....
gi 1907080392 272 HPYL 275
Cdd:cd08222   257 IPFI 260
STKc_DRAK cd14106
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
62-275 2.20e-22

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs, also called STK17, were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. They may play a role in apoptotic signaling. The DRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271008 [Multi-domain]  Cd Length: 268  Bit Score: 95.11  E-value: 2.20e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  62 EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVe 137
Cdd:cd14106    82 ELILILELAAGgELQTLLDEEECLTEADVRRLMRQILEGVQYLHERNIVHLDLKPQNILLTSefpLGDIKLCDFGISRV- 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 138 eLDESRHMTQEVVTQYYRAPEILmgsrHY---SNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITdllgtpsleamr 214
Cdd:cd14106   161 -IGEGEEIREILGTPDYVAPEIL----SYepiSLATDMWSIGVLTYVLLTGHSPFGGDDKQETFLNIS------------ 223
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 215 tacegakahilrgphkQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14106   224 ----------------QCNLDFPEELFKDVSPLAIDFIKRLLVKDPEKRLTAKECLEHPWL 268
STKc_MELK cd14078
Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; ...
9-275 2.20e-22

Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MELK is a cell cycle dependent protein which functions in cytokinesis, cell cycle, apoptosis, cell proliferation, and mRNA processing. It is found upregulated in many types of cancer cells, playing an indispensable role in cancer cell survival. It makes an attractive target in the design of inhibitors for use in the treatment of a wide range of human cancer. The MELK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270980 [Multi-domain]  Cd Length: 257  Bit Score: 94.76  E-value: 2.20e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSD 87
Cdd:cd14078    28 GEKVAIKIM-DKKALGDDLPRVKTEIEALKNLSHQHICRLYHVIETD-----NKIFMVLEYCPGgELFDYIVAKDRLSED 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYS 167
Cdd:cd14078   102 EARVFFRQIVSAVAYVHSQGYAHRDLKPENLLLDEDQNLKLIDFGLCAKPKGGMDHHLETCCGSPAYAAPELIQGKPYIG 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NAIDIWSVGCIFAELLGRRILFqaqspiqqldlitDLLGTPSLEAMrtacegakahILRGPHKQPSLpvlytLSsqatHE 247
Cdd:cd14078   182 SEADVWSMGVLLYALLCGFLPF-------------DDDNVMALYRK----------IQSGKYEEPEW-----LS----PS 229
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 248 AVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14078   230 SKLLLDQMLQVDPKKRITVKELLNHPWV 257
STKc_DCKL cd14095
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called ...
33-274 2.22e-22

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called Doublecortin-like and CAM kinase-like); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL (or DCAMKL) proteins belong to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL proteins contain a C-terminal kinase domain with similarity to CAMKs. They are involved in the regulation of cAMP signaling. Vertebrates contain three DCKL proteins (DCKL1-3); DCKL1 and 2 also contain a serine, threonine, and proline rich domain (SP), while DCKL3 contains only a single DCX domain instead of tandem domains. The DCKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270997 [Multi-domain]  Cd Length: 258  Bit Score: 95.08  E-value: 2.22e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDilqppHIDYFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd14095    48 EVAILRRVKHPNIVQLIE-----EYDTDTELYLVMELVKgGDLFDAITSSTKFTERDASRMVTDLAQALKYLHSLSIVHR 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLVNSN----CVLKICDFGLArveeldesrhmtQEVV--------TQYYRAPEILMgSRHYSNAIDIWSVGCIF 179
Cdd:cd14095   123 DIKPENLLVVEHedgsKSLKLADFGLA------------TEVKeplftvcgTPTYVAPEILA-ETGYGLKVDIWAAGVIT 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 180 AELLGRRILFQAQSPIQQldlitDLLgtpsleamrtacegakAHILRGPHKQPSlPVLYTLSSQATheavHLLCRMLVFD 259
Cdd:cd14095   190 YILLCGFPPFRSPDRDQE-----ELF----------------DLILAGEFEFLS-PYWDNISDSAK----DLISRMLVVD 243
                         250
                  ....*....|....*
gi 1907080392 260 PSKRISAKDALAHPY 274
Cdd:cd14095   244 PEKRYSAGQVLDHPW 258
STKc_CaMKI cd14083
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
5-274 2.90e-22

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270985 [Multi-domain]  Cd Length: 259  Bit Score: 94.75  E-value: 2.90e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPnvfQNLVSCKR--VFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSP 81
Cdd:cd14083    24 DKATGKLVAIKCID---KKALKGKEdsLENEIAVLRKIKHPNIVQLLDIYESK-----SHLYLVMELVTGgELFDRIVEK 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEeldESRHMTQEVVTQYYRAPE 158
Cdd:cd14083    96 GSYTEKDASHLIRQVLEAVDYLHSLGIVHRDLKPENLLYYSpdeDSKIMISDFGLSKME---DSGVMSTACGTPGYVAPE 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILmGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPiqqldliTDLLgtpsleamrtacegakAHILRGPHKQPSlPVLY 238
Cdd:cd14083   173 VL-AQKPYGKAVDCWSIGVISYILLCGYPPFYDEND-------SKLF----------------AQILKAEYEFDS-PYWD 227
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1907080392 239 TLSSQATHEAVHLLCRmlvfDPSKRISAKDALAHPY 274
Cdd:cd14083   228 DISDSAKDFIRHLMEK----DPNKRYTCEQALEHPW 259
PKc_CLK3 cd14214
Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 3; Dual-specificity ...
7-275 3.09e-22

Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 3; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. CLK3 is predominantly expressed in mature spermatozoa, and might play a role in the fertilization process. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on serine/threonine residues. The CLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271116 [Multi-domain]  Cd Length: 331  Bit Score: 96.23  E-value: 3.09e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNvlSALDILQPPHIDYFEEIYVVTELMQSDLHKII----VSPQ 82
Cdd:cd14214    37 RGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN--KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLkennFQPY 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSsdHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL-VNS------------------NCVLKICDFGLARVEEldesR 143
Cdd:cd14214   115 PLP--HIRHMAYQLCHALKFLHENQLTHTDLKPENILfVNSefdtlynesksceeksvkNTSIRVADFGSATFDH----E 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 144 HMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLG-TPSLEAMRTACEG--A 220
Cdd:cd14214   189 HHTTIVATRHYRPPEVIL-ELGWAQPCDVWSLGCILFEYYRGFTLFQTHENREHLVMMEKILGpIPSHMIHRTRKQKyfY 267
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 221 KAHIL------RGPHKQPSLPVLYTLSSQATHEAVH---LLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14214   268 KGSLVwdenssDGRYVSENCKPLMSYMLGDSLEHTQlfdLLRRMLEFDPALRITLKEALLHPFF 331
STKc_CaMKK2 cd14199
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; ...
28-275 3.29e-22

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK2, also called CaMKK beta, is one of the most versatile CaMKs. It is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. CaMKK2 contains unique N- and C-terminal domains and a central catalytic kinase domain that is followed by a regulatory domain that bears overlapping autoinhibitory and CaM-binding regions. It can be activated by signaling through G-coupled receptors, IP3 receptors, plasma membrane ion channels, and Toll-like receptors. Thus, CaMKK2 acts as a molecular hub that is capable of receiving and decoding signals from diverse pathways. The CaMKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271101 [Multi-domain]  Cd Length: 286  Bit Score: 95.03  E-value: 3.29e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPHIDYfeeIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14199    70 ERVYQEIAILKKLDHPNVVKLVEVLDDPSEDH---LYMVFELVKQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhMTQEVVTQYYRAPEILMGSRHY--SNAIDIWSVG-CIFAELLG 184
Cdd:cd14199   147 IIHRDVKPSNLLVGEDGHIKIADFGVSNEFEGSDAL-LTNTVGTPAFMAPETLSETRKIfsGKALDVWAMGvTLYCFVFG 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 185 RrilfqaqspiqqldlitdllgtpsleamrtaCEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRI 264
Cdd:cd14199   226 Q-------------------------------CPFMDERILSLHSKIKTQPLEFPDQPDISDDLKDLLFRMLDKNPESRI 274
                         250
                  ....*....|.
gi 1907080392 265 SAKDALAHPYL 275
Cdd:cd14199   275 SVPEIKLHPWV 285
STKc_PLK1 cd14187
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the ...
52-278 3.39e-22

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. Its localization changes during mitotic progression; associating first with centrosomes in prophase, with kinetochores in prometaphase and metaphase, at the central spindle in anaphase, and in the midbody during telophase. It carries multiple functions throughout the cell cycle through interactions with differrent substrates at these specific subcellular locations. PLK1 is overexpressed in many human cancers and is associated with poor prognosis. The PLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271089 [Multi-domain]  Cd Length: 265  Bit Score: 94.61  E-value: 3.39e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  52 LQPPHI----DYFEE---IYVVTELMQS----DLHKiivSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV 120
Cdd:cd14187    64 LAHQHVvgfhGFFEDndfVYVVLELCRRrsllELHK---RRKALTEPEARYYLRQIILGCQYLHRNRVIHRDLKLGNLFL 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 121 NSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILmGSRHYSNAIDIWSVGCIfaellgrrilfqaqspiqqldL 200
Cdd:cd14187   141 NDDMEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVL-SKKGHSFEVDIWSIGCI---------------------M 197
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 201 ITDLLGTPSLEamrTACegAKAHILRGPHKQpslpvlYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEG 278
Cdd:cd14187   198 YTLLVGKPPFE---TSC--LKETYLRIKKNE------YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 264
PKc_CLK1_4 cd14213
Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases 1 and 4; ...
8-275 4.22e-22

Catalytic domain of the Dual-specificity protein kinases, CDC-like kinases 1 and 4; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. CLK1 plays a role in neuronal differentiation. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on serine/threonine residues. The CLK1/4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271115 [Multi-domain]  Cd Length: 330  Bit Score: 95.69  E-value: 4.22e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQ---------------NLVSCKRVFRELKMLCFFKHD-NVLSALDILQPPHIDYFEEiyvvtelmq 71
Cdd:cd14213    37 GGMHVAVKIVKNVDRyreaarseiqvlehlNTTDPNSTFRCVQMLEWFDHHgHVCIVFELLGLSTYDFIKE--------- 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  72 sdlhkiiVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL-VNS------------------NCVLKICDFG 132
Cdd:cd14213   108 -------NSFLPFPIDHIRNMAYQICKSVNFLHHNKLTHTDLKPENILfVQSdyvvkynpkmkrdertlkNPDIKVVDFG 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 133 LARVEEldesRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 212
Cdd:cd14213   181 SATYDD----EHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPLPKHM 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 213 MRTACEGAKAHILR-----------------GPHKQpslpvlYTLSSQATHEAV-HLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14213   256 IQKTRKRKYFHHDQldwdehssagryvrrrcKPLKE------FMLSQDVDHEQLfDLIQKMLEYDPAKRITLDEALKHPF 329

                  .
gi 1907080392 275 L 275
Cdd:cd14213   330 F 330
PKc_Myt1 cd14050
Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze ...
1-273 4.38e-22

Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Myt1 is a cytoplasmic cell cycle checkpoint kinase that can keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of N-terminal thr (T14) and tyr (Y15) residues, leading to the delay of meiosis I entry. Meiotic progression is ensured by a two-step inhibition and downregulation of Myt1 by CDK1/XRINGO and p90Rsk during oocyte maturation. In addition, Myt1 targets cyclin B1/B2 and is essential for Golgi and ER assembly during telophase. In Drosophila, Myt1 may be a downstream target of Notch during eye development. The Myt1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270952 [Multi-domain]  Cd Length: 249  Bit Score: 93.91  E-value: 4.38e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   1 MSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKmlcffKHDNVlsaldilqPPH------IDYFEE---IYVVTELMQ 71
Cdd:cd14050    18 FKVRSREDGKLYAVKRSRSRFRGEKDRKRKLEEVE-----RHEKL--------GEHpncvrfIKAWEEkgiLYIQTELCD 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  72 SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLarVEELDESRHMTQEVVT 151
Cdd:cd14050    85 TSLQQYCEETHSLPESEVWNILLDLLKGLKHLHDHGLIHLDIKPANIFLSKDGVCKLGDFGL--VVELDKEDIHDAQEGD 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 152 QYYRAPEILMGsrHYSNAIDIWSVGcifaellgrrilfqaqspIQQLDLITDlLGTPSleamrtacEGAKAHILRgphkQ 231
Cdd:cd14050   163 PRYMAPELLQG--SFTKAADIFSLG------------------ITILELACN-LELPS--------GGDGWHQLR----Q 209
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 232 PSLPVLYTlsSQATHEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd14050   210 GYLPEEFT--AGLSPELRSIIKLMMDPDPERRPTAEDLLALP 249
PTKc cd00192
Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
11-177 4.49e-22

Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.The PTK family is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270623 [Multi-domain]  Cd Length: 262  Bit Score: 94.14  E-value: 4.49e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  11 RVALKKMPNVFQNlvSCKRVF-RELKMLCFFKHDNVLSALDIlqpphIDYFEEIYVVTELM-QSDLHK---------IIV 79
Cdd:cd00192    25 DVAVKTLKEDASE--SERKDFlKEARVMKKLGHPNVVRLLGV-----CTEEEPLYLVMEYMeGGDLLDflrksrpvfPSP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPE 158
Cdd:cd00192    98 EPSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRdIYDDDYYRKKTGGKLPIRWMAPE 177
                         170
                  ....*....|....*....
gi 1907080392 159 ILMgSRHYSNAIDIWSVGC 177
Cdd:cd00192   178 SLK-DGIFTSKSDVWSFGV 195
STKc_MEKK3_like cd06625
Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) ...
4-274 4.78e-22

Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MEKK3, MEKK2, and related proteins; all contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKK) that activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270795 [Multi-domain]  Cd Length: 260  Bit Score: 93.96  E-value: 4.78e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMPNVFQNLVSCKRVF---RELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIV 79
Cdd:cd06625    20 YDADTGRELAVKQVEIDPINTEASKEVKaleCEIQLLKNLQHERIVQYYGCLQDE-----KSLSIFMEYMPGgSVKDEIK 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMTQEVVTQYYRAPE 158
Cdd:cd06625    95 AYGALTENVTRKYTRQILEGLAYLHSNMIVHRDIKGANILRDSNGNVKLGDFGASkRLQTICSSTGMKSVTGTPYWMSPE 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGsRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQldlitdllgtpsLEAMrtacegakAHILRgPHKQPSLPVLY 238
Cdd:cd06625   175 VING-EGYGRKADIWSVGCTVVEML------TTKPPWAE------------FEPM--------AAIFK-IATQPTNPQLP 226
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1907080392 239 TLSSQATHEavhLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd06625   227 PHVSEDARD---FLSLIFVRNKKQRPSAEELLSHSF 259
STKc_SNRK cd14074
Catalytic domain of the Serine/Threonine Kinase, SNF1-related kinase; STKs catalyze the ...
9-275 5.19e-22

Catalytic domain of the Serine/Threonine Kinase, SNF1-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SNRK is a kinase highly expressed in testis and brain that is found inactive in cells that lack the LKB1 tumour suppressor protein kinase. The regulatory subunits STRAD and MO25 are required for LKB1 to activate SNRK. The SNRK mRNA is increased 3-fold when granule neurons are cultured in low potassium, and may thus play a role in the survival responses in these cells. In some vertebrates, a second SNRK gene (snrkb or snrk-1) has been sequenced and/or identified. Snrk-1 is expressed specifically in embryonic zebrafish vasculature; it plays an essential role in angioblast differentiation, maintenance, and migration. The SNRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270976 [Multi-domain]  Cd Length: 258  Bit Score: 94.02  E-value: 5.19e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDIlqpphIDYFEEIYVVTELMQS-DLHKIIVS-PQPLSS 86
Cdd:cd14074    28 GEKVAVKVIDKTKLDDVSKAHLFQEVRCMKLVQHPNVVRLYEV-----IDTQTKLYLILELGDGgDMYDYIMKhENGLNE 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV-NSNCVLKICDFGLARV----EELDESrhmtqeVVTQYYRAPEILM 161
Cdd:cd14074   103 DLARKYFRQIVSAISYCHKLHVVHRDLKPENVVFfEKQGLVKLTDFGFSNKfqpgEKLETS------CGSLAYSAPEILL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDllgtpsleamrtaCEgakahilrgphkqpslpvlYTLS 241
Cdd:cd14074   177 GDEYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD-------------CK-------------------YTVP 224
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1907080392 242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14074   225 AHVSPECKDLIRRMLIRDPKKRASLEEIENHPWL 258
STKc_CaMKII cd14086
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
32-286 5.59e-22

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. In addition, CaMKII contains a C-terminal association domain that facilitates oligomerization. There are four CaMKII proteins (alpha, beta, gamma, delta) encoded by different genes; each gene undergoes alternative splicing to produce more than 30 isoforms. CaMKII-alpha and -beta are enriched in neurons while CaMKII-gamma and -delta are predominant in myocardium. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. It is a major component of the postsynaptic density and is critical in regulating synaptic plasticity including long-term potentiation. It is critical in regulating ion channels and proteins involved in myocardial excitation-contraction and excitation-transcription coupling. Excessive CaMKII activity promotes processes that contribute to heart failure and arrhythmias. The CaMKII subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270988 [Multi-domain]  Cd Length: 292  Bit Score: 94.41  E-value: 5.59e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPHidYFeeiYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd14086    49 REARICRLLKHPNIVRLHDSISEEG--FH---YLVFDLVTGgELFEDIVAREFYSEADASHCIQQILESVNHCHQNGIVH 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNC---VLKICDFGLArVEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELlgrri 187
Cdd:cd14086   124 RDLKPENLLLASKSkgaAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDIWACGVILYIL----- 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 lfqaqspiqqldlitdLLGTPSLeaMRTACEGAKAHILRGPHKQPSlPVLYTLssqaTHEAVHLLCRMLVFDPSKRISAK 267
Cdd:cd14086   197 ----------------LVGYPPF--WDEDQHRLYAQIKAGAYDYPS-PEWDTV----TPEAKDLINQMLTVNPAKRITAA 253
                         250
                  ....*....|....*....
gi 1907080392 268 DALAHPYLDEgRLRYHTCM 286
Cdd:cd14086   254 EALKHPWICQ-RDRVASMV 271
STKc_RSK1_C cd14175
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called ...
36-275 1.08e-21

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 1 (also called Ribosomal protein S6 kinase alpha-1 or 90kDa ribosomal protein S6 kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK1 is also called S6K-alpha-1, RPS6KA1, p90RSK1 or MAPK-activated protein kinase 1a (MAPKAPK-1a). It is a component of the insulin transduction pathway, regulating the function of IRS1. It also interacts with PKA and promotes its inactivation. RSK1 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271077 [Multi-domain]  Cd Length: 291  Bit Score: 93.94  E-value: 1.08e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  36 MLCFFKHDNVLSALDILqpphiDYFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIK 114
Cdd:cd14175    48 LLRYGQHPNIITLKDVY-----DDGKHVYLVTELMRGgELLDKILRQKFFSEREASSVLHTICKTVEYLHSQGVVHRDLK 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 115 PGNLLV-----NSNCvLKICDFGLARVEELDESRHMTqEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILF 189
Cdd:cd14175   123 PSNILYvdesgNPES-LRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLAGYTPF 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 190 qAQSPIQqldlitdllgTPSLEAMRTaceGAKAHILRGPHKQpslpvlyTLSSQATheavHLLCRMLVFDPSKRISAKDA 269
Cdd:cd14175   200 -ANGPSD----------TPEEILTRI---GSGKFTLSGGNWN-------TVSDAAK----DLVSKMLHVDPHQRLTAKQV 254

                  ....*.
gi 1907080392 270 LAHPYL 275
Cdd:cd14175   255 LQHPWI 260
STKc_Nek5 cd08225
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
10-200 1.22e-21

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Nek5 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173765 [Multi-domain]  Cd Length: 257  Bit Score: 93.10  E-value: 1.22e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPnVFQNLVSCKRVFRELKMlcffKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPL--SS 86
Cdd:cd08225    31 KEIDLTKMP-VKEKEASKKEVILLAKM----KHPNIVTFFASFQENG-----RLFIVMEYCDGgDLMKRINRQRGVlfSE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN-CVLKICDFGLARVeeLDESRHMTQEVV-TQYYRAPEILMgSR 164
Cdd:cd08225   101 DQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNgMVAKLGDFGIARQ--LNDSMELAYTCVgTPYYLSPEICQ-NR 177
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1907080392 165 HYSNAIDIWSVGCIFAELLGRRILFQAQSpIQQLDL 200
Cdd:cd08225   178 PYNNKTDIWSLGCVLYELCTLKHPFEGNN-LHQLVL 212
STKc_Pat1_like cd13993
Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of ...
5-183 1.36e-21

Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Pat1 (also called Ran1), Saccharomyces cerevisiae VHS1 and KSP1, and similar fungal STKs. Pat1 blocks Mei2, an RNA-binding protein which is indispensable in the initiation of meiosis. Pat1 is inactivated and Mei2 activated, which initiates meiosis, under nutrient-deprived conditions through a signaling cascade involving Ste11. Meiosis induced by Pat1 inactivation may show different characteristics than normal meiosis including aberrant positioning of centromeres. VHS1 was identified in a screen for suppressors of cell cycle arrest at the G1/S transition, while KSP1 may be involved in regulating PRP20, which is required for mRNA export and maintenance of nuclear structure. The Pat1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270895 [Multi-domain]  Cd Length: 267  Bit Score: 92.80  E-value: 1.36e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKM----PN-VFQNLVSCKRVFRELKMLC-FFKHDNVLSALDilqppHIDYFEEIYVVTELM-QSDLHKI 77
Cdd:cd13993    21 DLRTGRKYAIKCLyksgPNsKDGNDFQKLPQLREIDLHRrVSRHPNIITLHD-----VFETEVAIYIVLEYCpNGDLFEA 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN-CVLKICDFGLArveeLDESRHMTQEVVTQYY 154
Cdd:cd13993    96 ITENRiyVGKTELIKNVFLQLIDAVKHCHSLGIYHRDIKPENILLSQDeGTVKLCDFGLA----TTEKISMDFGVGSEFY 171
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907080392 155 RAPEIL-----MGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd13993   172 MAPECFdevgrSLKGYPCAAGDIWSLGIILLNLT 205
STKc_TAK1 cd14058
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated ...
9-227 1.93e-21

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated Kinase-1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAK1 is also known as mitogen-activated protein kinase kinase kinase 7 (MAPKKK7 or MAP3K7), TAK, or MEKK7. As a MAPKKK, it is an important mediator of cellular responses to extracellular signals. It regulates both the c-Jun N-terminal kinase and p38 MAPK cascades by activating the MAPK kinases, MKK4 and MKK3/6. In addition, TAK1 plays diverse roles in immunity and development, in different biological contexts, through many signaling pathways including TGFbeta/BMP, Wnt/Fz, and NF-kB. It is also implicated in the activation of the tumor suppressor kinase, LKB1. The TAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270960 [Multi-domain]  Cd Length: 253  Bit Score: 92.11  E-value: 1.93e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKkmpnVFQNLVSCKRVFRELKMLCFFKHDNV--LSALDILQPPhidyfeeIYVVTELMQ-SDLHKIIVSPQPL- 84
Cdd:cd14058    16 NQIVAVK----IIESESEKKAFEVEVRQLSRVDHPNIikLYGACSNQKP-------VCLVMEYAEgGSLYNVLHGKEPKp 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 --SSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGN-LLVNSNCVLKICDFGLArveeLDESRHMTQEVVTQYYRAPE 158
Cdd:cd14058    85 iyTAAHAMSWALQCAKGVAYLHSmkpKALIHRDLKPPNlLLTNGGTVLKICDFGTA----CDISTHMTNNKGSAAWMAPE 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 159 ILMGSRhYSNAIDIWSVGCIFAELLGRRILFqaqspiqqldlitDLLGTPSLEAMRTACEGAKAHILRG 227
Cdd:cd14058   161 VFEGSK-YSEKCDVFSWGIILWEVITRRKPF-------------DHIGGPAFRIMWAVHNGERPPLIKN 215
STKc_PSKH1 cd14087
Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the ...
33-275 2.92e-21

Catalytic domain of the Protein Serine/Threonine kinase H1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PSKH1 is an autophosphorylating STK that is expressed ubiquitously and exhibits multiple intracellular localizations including the centrosome, Golgi apparatus, and splice factor compartments. It contains a catalytic kinase domain and an N-terminal SH4-like motif that is acylated to facilitate membrane attachment. PSKH1 plays a rile in the maintenance of the Golgi apparatus, an important organelle within the secretory pathway. It may also function as a novel splice factor and a regulator of prostate cancer cell growth. The PSKH1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270989 [Multi-domain]  Cd Length: 259  Bit Score: 91.83  E-value: 2.92e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd14087    47 ELNVLRRVRHTNIIQLIEVFETK-----ERVYMVMELATGgELFDRIIAKGSFTERDATRVLQMVLDGVKYLHGLGITHR 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLV---NSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRIL 188
Cdd:cd14087   122 DLKPENLLYyhpGPDSKIMITDFGLASTRKKGPNCLMKTTCGTPEYIAPEILL-RKPYTQSVDMWAVGVIAYILLSGTMP 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 189 FQAqspiqqlDLITDLLgtpsleamrtacegakAHILRGPHKQPSLPvlytlSSQATHEAVHLLCRMLVFDPSKRISAKD 268
Cdd:cd14087   201 FDD-------DNRTRLY----------------RQILRAKYSYSGEP-----WPSVSNLAKDFIDRLLTVNPGERLSATQ 252

                  ....*..
gi 1907080392 269 ALAHPYL 275
Cdd:cd14087   253 ALKHPWI 259
STKc_MSK_C cd14092
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
42-284 4.66e-21

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270994 [Multi-domain]  Cd Length: 311  Bit Score: 92.36  E-value: 4.66e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  42 HDNVLSALDILQPPHidyfeEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV 120
Cdd:cd14092    58 HPNIVKLHEVFQDEL-----HTYLVMELLRgGELLERIRKKKRFTESEASRIMRQLVSAVSFMHSKGVVHRDLKPENLLF 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 121 ---NSNCVLKICDFGLARVeeLDESRHMTQEVVTQYYRAPEILMGSRH---YSNAIDIWSVGCIFAELLGRRILFQAQSP 194
Cdd:cd14092   133 tdeDDDAEIKIVDFGFARL--KPENQPLKTPCFTLPYAAPEVLKQALStqgYDESCDLWSLGVILYTMLSGQVPFQSPSR 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 195 iqqldlitdllGTPSLEAMRTACEGAkahilrgphkqpslpvlYTLSSQATH----EAVHLLCRMLVFDPSKRISAKDAL 270
Cdd:cd14092   211 -----------NESAAEIMKRIKSGD-----------------FSFDGEEWKnvssEAKSLIQGLLTVDPSKRLTMSELR 262
                         250
                  ....*....|....
gi 1907080392 271 AHPYLDEGRLRYHT 284
Cdd:cd14092   263 NHPWLQGSSSPSST 276
STKc_RSK_C cd14091
C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs ...
50-275 4.89e-21

C-terminal catalytic domain of the Serine/Threonine Kinases, Ribosomal S6 kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), 90 kDa ribosomal protein S6 kinases (p90-RSKs), or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270993 [Multi-domain]  Cd Length: 291  Bit Score: 91.93  E-value: 4.89e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  50 DIL----QPPHI----DYFEE---IYVVTELMQSD--LHKIIVSPQpLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPG 116
Cdd:cd14091    45 EILlrygQHPNIitlrDVYDDgnsVYLVTELLRGGelLDRILRQKF-FSEREASAVMKTLTKTVEYLHSQGVVHRDLKPS 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 117 NLLVNSNC----VLKICDFGLARveeldESRH-----MTqEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRI 187
Cdd:cd14091   124 NILYADESgdpeSLRICDFGFAK-----QLRAengllMT-PCYTANFVAPEVLK-KQGYDAACDIWSLGVLLYTMLAGYT 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 LFqAQSPIQQLDLITDLLGtpslEAMRTACEGAKAHIlrgphkqpslpvlytlssqaTHEAVHLLCRMLVFDPSKRISAK 267
Cdd:cd14091   197 PF-ASGPNDTPEVILARIG----SGKIDLSGGNWDHV--------------------SDSAKDLVRKMLHVDPSQRPTAA 251

                  ....*...
gi 1907080392 268 DALAHPYL 275
Cdd:cd14091   252 QVLQHPWI 259
STKc_PASK cd14004
Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs ...
27-275 5.73e-21

Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PASK (or PASKIN) is a nutrient and energy sensor and thus, plays an important role in maintaining cellular energy homeostasis. It coordinates the utilization of glucose in response to metabolic demand. It contains an N-terminal PAS domain which directly interacts and inhibits a C-terminal catalytic kinase domain. The PAS domain serves as a sensory module for different environmental signals such as light, redox state, and various metabolites. Binding of ligands to the PAS domain causes structural changes which leads to kinase activation and the phosphorylation of substrates to trigger the appropriate cellular response. The PASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270906 [Multi-domain]  Cd Length: 256  Bit Score: 90.91  E-value: 5.73e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  27 CKRVFRELKMLCF---FKHDNVLSALDILQPPhiDYFeeiYVVTELMQS--DLHKIIVSPQPLSSDHVKVFLYQILRGLK 101
Cdd:cd14004    49 LGTVPLEIHILDTlnkRSHPNIVKLLDFFEDD--EFY---YLVMEKHGSgmDLFDFIERKPNMDEKEAKYIFRQVADAVK 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 102 YLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArveELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAE 181
Cdd:cd14004   124 HLHDQGIVHRDIKDENVILDGNGTIKLIDFGSA---AYIKSGPFDTFVGTIDYAAPEVLRGNPYGGKEQDIWALGVLLYT 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 182 LLGRrilfqaQSPIQQLDlitdllgtpsleamrtacegakaHILRGPHKQPslpvlYTLSSqathEAVHLLCRMLVFDPS 261
Cdd:cd14004   201 LVFK------ENPFYNIE-----------------------EILEADLRIP-----YAVSE----DLIDLISRMLNRDVG 242
                         250
                  ....*....|....
gi 1907080392 262 KRISAKDALAHPYL 275
Cdd:cd14004   243 DRPTIEELLTDPWL 256
STKc_CaMKI_alpha cd14167
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
5-275 6.29e-21

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271069 [Multi-domain]  Cd Length: 263  Bit Score: 91.24  E-value: 6.29e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPnvfQNLVSCKR--VFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSP 81
Cdd:cd14167    24 EKRTQKLVAIKCIA---KKALEGKEtsIENEIAVLHKIKHPNIVALDDIYESG-----GHLYLIMQLVSGgELFDRIVEK 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL---VNSNCVLKICDFGLARVEelDESRHMTQEVVTQYYRAPE 158
Cdd:cd14167    96 GFYTERDASKLIFQILDAVKYLHDMGIVHRDLKPENLLyysLDEDSKIMISDFGLSKIE--GSGSVMSTACGTPGYVAPE 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILmGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDlitdllgtpsleamrtacegakaHILRGPHKQPSlPVLY 238
Cdd:cd14167   174 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE-----------------------QILKAEYEFDS-PYWD 228
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1907080392 239 TLSSQATHEAVHLLCRmlvfDPSKRISAKDALAHPYL 275
Cdd:cd14167   229 DISDSAKDFIQHLMEK----DPEKRFTCEQALQHPWI 261
STKc_MST3_like cd06609
Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs ...
44-275 7.12e-21

Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270786 [Multi-domain]  Cd Length: 274  Bit Score: 91.15  E-value: 7.12e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  44 NVLSALDIlqpPHI-DYFE------EIYVVTELMQ----SDLHKiivsPQPLSSDHVKVFLYQILRGLKYLHSAGILHRD 112
Cdd:cd06609    51 QFLSQCDS---PYItKYYGsflkgsKLWIIMEYCGggsvLDLLK----PGPLDETYIAFILREVLLGLEYLHSEGKIHRD 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 113 IKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMGSRHYSNAiDIWSVGCIFAELLGrrilfqaq 192
Cdd:cd06609   124 IKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF-VGTPFWMAPEVIKQSGYDEKA-DIWSLGITAIELAK-------- 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 193 spiqqldlitdllGTP---SLEAMRtacegakAHILRGPHKQPSLPvlYTLSSQATHEAVHlLCrmLVFDPSKRISAKDA 269
Cdd:cd06609   194 -------------GEPplsDLHPMR-------VLFLIPKNNPPSLE--GNKFSKPFKDFVE-LC--LNKDPKERPSAKEL 248

                  ....*.
gi 1907080392 270 LAHPYL 275
Cdd:cd06609   249 LKHKFI 254
STKc_SIK cd14071
Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the ...
28-275 7.27e-21

Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SIKs are part of a complex network that regulates Na,K-ATPase to maintain sodium homeostasis and blood pressure. Vertebrates contain three forms of SIKs (SIK1-3) from three distinct genes, which display tissue-specific effects. SIK1, also called SNF1LK, controls steroidogenic enzyme production in adrenocortical cells. In the brain, both SIK1 and SIK2 regulate energy metabolism. SIK2, also called QIK or SNF1LK2, is involved in the regulation of gluconeogenesis in the liver and lipogenesis in adipose tissues, where it phosphorylates the insulin receptor substrate-1. In the liver, SIK3 (also called QSK) regulates cholesterol and bile acid metabolism. In addition, SIK2 plays an important role in the initiation of mitosis and regulates the localization of C-Nap1, a centrosome linker protein. The SIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270973 [Multi-domain]  Cd Length: 253  Bit Score: 90.53  E-value: 7.27e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPHIdyfeeIYVVTELM-QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd14071    44 KKIYREVQIMKMLNHPHIIKLYQVMETKDM-----LYLVTEYAsNGEIFDYLAQHGRMSEKEARKKFWQILSAVEYCHKR 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 GILHRDIKPGNLLVNSNCVLKICDFGLARVEELDEsrHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 186
Cdd:cd14071   119 HIVHRDLKAENLLLDANMNIKIADFGFSNFFKPGE--LLKTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGA 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 187 ILFQAqspiqqldlitdllgtPSLEAMRtacegakAHILRGPHKQPslpvlYTLSSqathEAVHLLCRMLVFDPSKRISA 266
Cdd:cd14071   197 LPFDG----------------STLQTLR-------DRVLSGRFRIP-----FFMST----DCEHLIRRMLVLDPSKRLTI 244

                  ....*....
gi 1907080392 267 KDALAHPYL 275
Cdd:cd14071   245 EQIKKHKWM 253
STKc_PAK5 cd06658
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the ...
4-275 7.59e-21

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. PAK5 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132989 [Multi-domain]  Cd Length: 292  Bit Score: 91.25  E-value: 7.59e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMpnvfqNLVSCKR---VFRELKMLCFFKHDNVLSALDilqpphiDYF--EEIYVVTELMQSDLHKII 78
Cdd:cd06658    42 TEKHTGKQVAVKKM-----DLRKQQRrelLFNEVVIMRDYHHENVVDMYN-------SYLvgDELWVVMEFLEGGALTDI 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGL-ARV-EELDESRHMtqeVVTQYYRA 156
Cdd:cd06658   110 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFcAQVsKEVPKRKSL---VGTPYWMA 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 157 PEILmgSR-HYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLgTPSLEAMRTAcegakAHILRGphkqpslp 235
Cdd:cd06658   187 PEVI--SRlPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL-PPRVKDSHKV-----SSVLRG-------- 250
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 236 vlytlssqatheavhLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06658   251 ---------------FLDLMLVREPSQRATAQELLQHPFL 275
STKc_CaMKI_gamma cd14166
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
9-276 8.80e-21

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I gamma; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271068 [Multi-domain]  Cd Length: 285  Bit Score: 91.21  E-value: 8.80e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVfqNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSD 87
Cdd:cd14166    28 GKLYALKCIKKS--PLSRDSSLENEIAVLKRIKHENIVTLEDIYEST-----THYYLVMQLVSGgELFDRILERGVYTEK 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEeldESRHMTQEVVTQYYRAPEILmGSR 164
Cdd:cd14166   101 DASRVINQVLSAVKYLHENGIVHRDLKPENLLYltpDENSKIMITDFGLSKME---QNGIMSTACGTPGYVAPEVL-AQK 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 HYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDllGTPSLEAmrtacegakahilrgphkqpslPVLYTLSSQA 244
Cdd:cd14166   177 PYSKAVDCWSIGVITYILLCGYPPFYEETESRLFEKIKE--GYYEFES----------------------PFWDDISESA 232
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1907080392 245 TheavHLLCRMLVFDPSKRISAKDALAHPYLD 276
Cdd:cd14166   233 K----DFIRHLLEKNPSKRYTCEKALSHPWII 260
STKc_YSK4 cd06631
Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs ...
95-275 1.01e-20

Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270801 [Multi-domain]  Cd Length: 266  Bit Score: 90.57  E-value: 1.01e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-----TQYYRAPEILMGSRHYSNA 169
Cdd:cd06631   111 QILEGVAYLHNNNVIHRDIKGNNIMLMPNGVIKLIDFGCAKRLCINLSSGSQSQLLksmrgTPYWMAPEVINETGHGRKS 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 170 iDIWSVGCIFAELLGRRilfqaqspiqqldlitdllgtPSLEAMrtACEGAKAHILRGPHKQPSLPVLYtlsSQATHEAV 249
Cdd:cd06631   191 -DIWSIGCTVFEMATGK---------------------PPWADM--NPMAAIFAIGSGRKPVPRLPDKF---SPEARDFV 243
                         170       180
                  ....*....|....*....|....*.
gi 1907080392 250 HlLCrmLVFDPSKRISAKDALAHPYL 275
Cdd:cd06631   244 H-AC--LTRDQDERPSAEQLLKHPFI 266
STKc_NAK1_like cd06917
Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of ...
45-176 1.25e-20

Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also called N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270822 [Multi-domain]  Cd Length: 277  Bit Score: 90.61  E-value: 1.25e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  45 VLSALDILQPPHI-DYF------EEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN 117
Cdd:cd06917    52 LLSQLKLGQPKNIiKYYgsylkgPSLWIIMDYCEGGSIRTLMRAGPIAERYIAVIMREVLVALKFIHKDGIIHRDIKAAN 131
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 118 LLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMGSRHYSNAIDIWSVG 176
Cdd:cd06917   132 ILVTNTGNVKLCDFGVAASLNQNSSKRSTF-VGTPYWMAPEVITEGKYYDTKADIWSLG 189
STKc_PLK2 cd14188
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the ...
51-275 1.83e-20

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK2, also called Snk (serum-inducible kinase), functions in G1 progression, S-phase arrest, and centriole duplication. Its gene is responsive to both growth factors and cellular stress, is a transcriptional target of p53, and activates a G2-M checkpoint. The PLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271090 [Multi-domain]  Cd Length: 255  Bit Score: 89.69  E-value: 1.83e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  51 ILQPPHIDYF-------EEIYVVTELM-QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS 122
Cdd:cd14188    57 ILHHKHVVQFyhyfedkENIYILLEYCsRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINE 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 123 NCVLKICDFGL-ARVEELDESRHMTqeVVTQYYRAPEILMGSRHYSNAiDIWSVGCI-FAELLGRrilfqaqSPIQQLDL 200
Cdd:cd14188   137 NMELKVGDFGLaARLEPLEHRRRTI--CGTPNYLSPEVLNKQGHGCES-DIWALGCVmYTMLLGR-------PPFETTNL 206
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907080392 201 itdllgTPSLEAMRTAcegakahilrgphkqpslpvLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14188   207 ------KETYRCIREA--------------------RYSLPSSLLAPAKHLIASMLSKNPEDRPSLDEIIRHDFF 255
STKc_IRAK cd14066
Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases ...
7-186 1.87e-20

Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. Some IRAKs may also play roles in T- and B-cell signaling, and adaptive immunity. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK-1, -2, and -4 are ubiquitously expressed and are active kinases, while IRAK-M is only induced in monocytes and macrophages and is an inactive kinase. Variations in IRAK genes are linked to diverse diseases including infection, sepsis, cancer, and autoimmune diseases. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain (a pseudokinase domain in the case of IRAK3), and a C-terminal domain; IRAK-4 lacks the C-terminal domain. This subfamily includes plant receptor-like kinases (RLKs) including Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1). BAK1 functions in BR (brassinosteroid)-regulated plant development and in pathways involved in plant resistance to pathogen infection and herbivore attack. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The IRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270968 [Multi-domain]  Cd Length: 272  Bit Score: 90.02  E-value: 1.87e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNvfQNLVSCKRVF-RELKMLCFFKHDNVLSALDIlqpphIDYFEEIYVVTELM-----QSDLHKIIVS 80
Cdd:cd14066    15 ENGTVVAVKRLNE--MNCAASKKEFlTELEMLGRLRHPNLVRLLGY-----CLESDEKLLVYEYMpngslEDRLHCHKGS 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PqPLS-SDHVKVFLyQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-TQYYR 155
Cdd:cd14066    88 P-PLPwPQRLKIAK-GIARGLEYLHEECpppIIHGDIKSSNILLDEDFEPKLTDFGLARLIPPSESVSKTSAVKgTIGYL 165
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907080392 156 APEILMGSRhYSNAIDIWSVGCIFAELL-GRR 186
Cdd:cd14066   166 APEYIRTGR-VSTKSDVYSFGVVLLELLtGKP 196
STKc_PAK6 cd06659
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the ...
9-275 1.94e-20

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. PAK6 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270821 [Multi-domain]  Cd Length: 297  Bit Score: 90.43  E-value: 1.94e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpnvfqNLVSCKR---VFRELKMLCFFKHDNVLSAldilqppHIDYF--EEIYVVTELMQSDLHKIIVSPQP 83
Cdd:cd06659    46 GRQVAVKMM-----DLRKQQRrelLFNEVVIMRDYQHPNVVEM-------YKSYLvgEELWVLMEYLQGGALTDIVSQTR 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMGS 163
Cdd:cd06659   114 LNEEQIATVCEAVLQALAYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL-VGTPYWMAPEVISRC 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 164 RhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDllgTPSLEamrtacegakahiLRGPHKQPslPVLYTlssq 243
Cdd:cd06659   193 P-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPPPK-------------LKNSHKAS--PVLRD---- 249
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1907080392 244 atheavhLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06659   250 -------FLERMLVRDPQERATAQELLDHPFL 274
PKc_Wee1_like cd13997
Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the ...
3-273 3.12e-20

Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity kinase Myt1, the protein tyrosine kinase Wee1, and similar proteins. These proteins are cell cycle checkpoint kinases that are involved in the regulation of cyclin-dependent kinase CDK1, the master engine for mitosis. CDK1 is kept inactivated through phosphorylation of N-terminal thr (T14 by Myt1) and tyr (Y15 by Myt1 and Wee1) residues. Mitosis progression is ensured through activation of CDK1 by dephoshorylation and inactivation of Myt1/Wee1. The Wee1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270899 [Multi-domain]  Cd Length: 252  Bit Score: 88.98  E-value: 3.12e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK-HDNVLSaldilqppHIDYFEE---IYVVTELMQ----SDL 74
Cdd:cd13997    19 VRSKVDGCLYAVKKSKKPFRGPKERARALREVEAHAALGqHPNIVR--------YYSSWEEgghLYIQMELCEngslQDA 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEeldESRHMTQEvVTQYY 154
Cdd:cd13997    91 LEELSPISKLSEAEVWDLLLQVALGLAFIHSKGIVHLDIKPDNIFISNKGTCKIGDFGLATRL---ETSGDVEE-GDSRY 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgtpsleamrtacegakahilrgphKQPSL 234
Cdd:cd13997   167 LAPELLNENYTHLPKADIFSLGVTVYEAATGEPLPRNGQQWQQL-------------------------------RQGKL 215
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1907080392 235 PVLYTLSSQAthEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd13997   216 PLPPGLVLSQ--ELTRLLKVMLDPDPTRRPTADQLLAHD 252
PKc_Byr1_like cd06620
Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; ...
8-274 3.32e-20

Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKK kinase Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The Byr-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270792 [Multi-domain]  Cd Length: 286  Bit Score: 89.42  E-value: 3.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVAlKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfEEIYVVTELMQSD-LHKIIVSPQPLSS 86
Cdd:cd06620    29 TGTIMA-KKVIHIDAKSSVRKQILRELQILHECHSPYIVSFYGAFLNEN----NNIIICMEYMDCGsLDKILKKKGPFPE 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQeVVTQYYRAPEILMGSRh 165
Cdd:cd06620   104 EVLGKIAVAVLEGLTYLYNVhRIIHRDIKPSNILVNSKGQIKLCDFGVSG--ELINSIADTF-VGTSTYMSPERIQGGK- 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 YSNAIDIWSVGCIFAELLGRRILFQAQ--------SPIQQLDLITDLLGTPSleamrtacegakahilrgphkqPSLPVl 237
Cdd:cd06620   180 YSVKSDVWSLGLSIIELALGEFPFAGSnddddgynGPMGILDLLQRIVNEPP----------------------PRLPK- 236
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1907080392 238 ytlSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd06620   237 ---DRIFPKDLRDFVDRCLLKDPRERPSPQLLLDHDP 270
STKc_STK33 cd14097
Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the ...
4-275 3.32e-20

Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK33 is highly expressed in the testis and is present in low levels in most tissues. It may be involved in spermatogenesis and organ ontogenesis. It interacts with and phosphorylates vimentin and may be involved in regulating intermediate filament cytoskeletal dynamics. Its role in promoting the cell viability of KRAS-dependent cancer cells is under debate; some studies have found STK33 to promote cancer cell viability, while other studies have found it to be non-essential. KRAS is the most commonly mutated human oncogene, thus, studies on the role of STK33 in KRAS mutant cancer cells are important. The STK33 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270999 [Multi-domain]  Cd Length: 266  Bit Score: 89.14  E-value: 3.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQ 82
Cdd:cd14097    21 THKETQTKWAIKKINREKAGSSAVKLLEREVDILKHVNHAHIIHLEEVFETP-----KRMYLVMELCEDgELKELLLRKG 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV-------LKICDFGLARVEELDESRHMTQEVVTQYYR 155
Cdd:cd14097    96 FFSENETRHIIQSLASAVAYLHKNDIVHRDLKLENILVKSSIIdnndklnIKVTDFGLSVQKYGLGEDMLQETCGTPIYM 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 156 APEIlMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKahilrgphkqpslp 235
Cdd:cd14097   176 APEV-ISAHGYSQQCDIWSIGVIMYMLLCGEPPFVAKSEEKLFEEIRKGDLTFTQSVWQSVSDAAK-------------- 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 236 vlytlssqatheavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14097   241 --------------NVLQQLLKVDPAHRMTASELLDNPWI 266
STKc_TSSK4-like cd14162
Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs ...
7-275 3.57e-20

Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. It phosphorylates Cre-Responsive Element Binding protein (CREB), facilitating the binding of CREB to the specific cis cAMP responsive element (CRE), which is important in activating genes related to germ cell differentiation. Mutations in the human TSSK4 gene is associated with infertile Chinese men with impaired spermatogenesis. The TSSK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271064 [Multi-domain]  Cd Length: 259  Bit Score: 88.89  E-value: 3.57e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALK-----KMPNVFQNlvscKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVS 80
Cdd:cd14162    23 KHKCKVAIKivskkKAPEDYLQ----KFLPREIEVIKGLKHPNLICFYEAIETTS-----RVYIIMELAENgDLLDYIRK 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQEVVTQY-YRAP 157
Cdd:cd14162    94 NGALPEPQARRWFRQLVAGVEYCHSKGVVHRDLKCENLLLDKNNNLKITDFGFARgvMKTKDGKPKLSETYCGSYaYASP 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMGSRHYSNAIDIWSVGCIFAELLGRRILFqaqspiqqldlitdllgtpsleamrtacEGAKAHILRgphKQPSLPVL 237
Cdd:cd14162   174 EILRGIPYDPFLSDIWSMGVVLYTMVYGRLPF----------------------------DDSNLKVLL---KQVQRRVV 222
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 238 YTLSSQATHEAVHLLCRMLVFDPsKRISAKDALAHPYL 275
Cdd:cd14162   223 FPKNPTVSEECKDLILRMLSPVK-KRITIEEIKRDPWF 259
STKc_Nek1 cd08218
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
32-193 4.23e-20

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Nek1 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270858 [Multi-domain]  Cd Length: 256  Bit Score: 88.71  E-value: 4.23e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSaldilqppHIDYFEE---IYVVTELMQS-DLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHS 105
Cdd:cd08218    48 KEVAVLSKMKHPNIVQ--------YQESFEEngnLYIVMDYCDGgDLYKRINAQRgvLFPEDQILDWFVQLCLALKHVHD 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 106 AGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVV-TQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLG 184
Cdd:cd08218   120 RKILHRDIKSQNIFLTKDGIIKLGDFGIARV--LNSTVELARTCIgTPYYLSPEICE-NKPYNNKSDIWALGCVLYEMCT 196

                  ....*....
gi 1907080392 185 RRILFQAQS 193
Cdd:cd08218   197 LKHAFEAGN 205
STKc_Mos cd13979
Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze ...
9-186 4.59e-20

Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mos (or c-Mos) is a germ-cell specific kinase that plays roles in both the release of primary arrest and the induction of secondary arrest in oocytes. It is expressed towards the end of meiosis I and is quickly degraded upon fertilization. It is a component of the cytostatic factor (CSF), which is responsible for metaphase II arrest. In addition, Mos activates a phoshorylation cascade that leads to the activation of the p34 subunit of MPF (mitosis-promoting factor or maturation promoting factor), a cyclin-dependent kinase that is responsible for the release of primary arrest in meiosis I. The Mos subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270881 [Multi-domain]  Cd Length: 265  Bit Score: 88.59  E-value: 4.59e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLcFFKHDNVLSALDILQPPHIDYFEEIyvVTELMQS-DLHKIIVSP-QPLSS 86
Cdd:cd13979    26 GETVAVKIVRRRRKNRASRQSFWAELNAA-RLRHENIVRVLAAETGTDFASLGLI--IMEYCGNgTLQQLIYEGsEPLPL 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDE-SRHMTQEVVTQYYRAPEILMGSR 164
Cdd:cd13979   103 AHRILISLDIARALRFCHSHGIVHLDVKPANILISEQGVCKLCDFGCSvKLGEGNEvGTPRSHIGGTYTYRAPELLKGER 182
                         170       180
                  ....*....|....*....|..
gi 1907080392 165 hYSNAIDIWSVGCIFAELLGRR 186
Cdd:cd13979   183 -VTPKADIYSFGITLWQMLTRE 203
STKc_EIF2AK4_GCN2_rpt2 cd14046
Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation ...
8-272 4.64e-20

Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GCN2 (or EIF2AK4) is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. Its kinase domain is activated via conformational changes as a result of the binding of uncharged tRNA to the HisRS-like domain. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270948 [Multi-domain]  Cd Length: 278  Bit Score: 88.97  E-value: 4.64e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKM---PNVFQNlvscKRVFRELKMLCFFKHDNVLSaldilqpphidYF------EEIYVVTELMQSD-LHKI 77
Cdd:cd14046    30 DGRYYAIKKIklrSESKNN----SRILREVMLLSRLNHQHVVR-----------YYqawierANLYIQMEYCEKStLRDL 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEL-----------------D 140
Cdd:cd14046    95 IDSGLFQDTDRLWRLFRQILEGLAYIHSQGIIHRDLKPVNIFLDSNGNVKIGDFGLATSNKLnvelatqdinkstsaalG 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 141 ESRHMTQEVVTQYYRAPEILMGS-RHYSNAIDIWSVGCIFAELlgrriLFQAQSPIQQLDLITdllgtpsleamrtaceg 219
Cdd:cd14046   175 SSGDLTGNVGTALYVAPEVQSGTkSTYNEKVDMYSLGIIFFEM-----CYPFSTGMERVQILT----------------- 232
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 220 akahILRGPhkQPSLPVLYTLSSQAthEAVHLLCRMLVFDPSKRISAKDALAH 272
Cdd:cd14046   233 ----ALRSV--SIEFPPDFDDNKHS--KQAKLIRWLLNHDPAKRPSAQELLKS 277
STKc_MAPKAPK cd14089
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated ...
36-274 5.50e-20

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPK-activated protein kinases MK2, MK3, MK5 (also called PRAK for p38-regulated/activated protein kinase), and related proteins. These proteins contain a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. In addition, MK2 and MK3 contain an N-terminal proline-rich region that can bind to SH3 domains. MK2 and MK3 are bonafide substrates for the MAPK p38, while MK5 plays a functional role in the p38 MAPK pathway although their direct interaction has been difficult to detect. MK2 and MK3 are closely related and show, thus far, indistinguishable substrate specificity, while MK5 shows a distinct spectrum of substrates. MK2 and MK3 are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270991 [Multi-domain]  Cd Length: 263  Bit Score: 88.50  E-value: 5.50e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  36 MLCFFKHDNVLSALDIL-----------------QPPHI----DYFEEIY-------VVTELMQS-DLHKIIVS--PQPL 84
Cdd:cd14089    18 LECFHKKTGEKFALKVLrdnpkarrevelhwrasGCPHIvriiDVYENTYqgrkcllVVMECMEGgELFSRIQEraDSAF 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILm 161
Cdd:cd14089    98 TEREAAEIMRQIGSAVAHLHSMNIAHRDLKPENLLYSSkgpNAILKLTDFGFAK--ETTTKKSLQTPCYTPYYVAPEVL- 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRRILF-----QAQSPiqqldlitdllgtpsleamrtaceGAKAHILRG----PHKQp 232
Cdd:cd14089   175 GPEKYDKSCDMWSLGVIMYILLCGYPPFysnhgLAISP------------------------GMKKRIRNGqyefPNPE- 229
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 233 slpvlytlSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14089   230 --------WSNVSEEAKDLIRGLLKTDPSERLTIEEVMNHPW 263
STKc_CASK cd14094
Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein ...
52-277 8.84e-20

Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CASK belongs to the MAGUK (membrane-associated guanylate kinase) protein family, which functions as multiple domain adaptor proteins and is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The enzymatically inactive GuK domain in MAGUK proteins mediates protein-protein interactions and associates intramolecularly with the SH3 domain. In addition, CASK contains a catalytic kinase and two L27 domains. It is highly expressed in the nervous system and plays roles in synaptic protein targeting, neural development, and regulation of gene expression. Binding partners include parkin (a Parkinson's disease molecule), neurexin (adhesion molecule), syndecans, calcium channel proteins, CINAP (nucleosome assembly protein), transcription factor Tbr-1, and the cytoplasmic adaptor proteins Mint1, Veli/mLIN-7/MALS, SAP97, caskin, and CIP98. Deletion or mutations in the CASK gene have been implicated in X-linked mental retardation. The CASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270996 [Multi-domain]  Cd Length: 300  Bit Score: 88.37  E-value: 8.84e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  52 LQPPHIDYFEE-------IYVVTELMQ-SDLHKIIV---SPQPLSSDHVKV-FLYQILRGLKYLHSAGILHRDIKPGNLL 119
Cdd:cd14094    62 LKHPHIVELLEtyssdgmLYMVFEFMDgADLCFEIVkraDAGFVYSEAVAShYMRQILEALRYCHDNNIIHRDVKPHCVL 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 120 VNS---NCVLKICDFGLARveELDESRHMTQ-EVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFqaqspi 195
Cdd:cd14094   142 LASkenSAPVKLGGFGVAI--QLGESGLVAGgRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPF------ 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 196 qqldlitdlLGTPSLEAMRtacegakahILRGphkqpSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14094   213 ---------YGTKERLFEG---------IIKG-----KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWI 269

                  ..
gi 1907080392 276 DE 277
Cdd:cd14094   270 KE 271
STKc_Nek4 cd08223
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
7-275 9.75e-20

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek4 is highly abundant in the testis. Its specific function is unknown. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270862 [Multi-domain]  Cd Length: 257  Bit Score: 87.49  E-value: 9.75e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMpnvfqNLVSCKRVFR-----ELKMLCFFKHDNVLSALDILQpphiDYFEEIYVVTELMQS-DLHKIIVS 80
Cdd:cd08223    23 RDRKQYVIKKL-----NLKNASKRERkaaeqEAKLLSKLKHPNIVSYKESFE----GEDGFLYIVMGFCEGgDLYTRLKE 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 P--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVV-TQYYRAP 157
Cdd:cd08223    94 QkgVLLEERQVVEWFVQIAMALQYMHERNILHRDLKTQNIFLTKSNIIKVGDLGIARV--LESSSDMATTLIgTPYYMSP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EiLMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlITDLLgtpsleamrtacegakAHILRGphKQPSLPvl 237
Cdd:cd08223   172 E-LFSNKPYNHKSDVWALGCCVYEMATLKHAFNAKD-------MNSLV----------------YKILEG--KLPPMP-- 223
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 238 ytlsSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd08223   224 ----KQYSPELGELIKAMLHQDPEKRPSVKRILRQPYI 257
STKc_PAK_I cd06647
Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze ...
2-275 1.15e-19

Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270814 [Multi-domain]  Cd Length: 261  Bit Score: 87.29  E-value: 1.15e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMpNVFQN-----LVSCKRVFRELKmlcffkHDNVLSALDilqpphiDYF--EEIYVVTELMQSDL 74
Cdd:cd06647    25 TAIDVATGQEVAIKQM-NLQQQpkkelIINEILVMRENK------NPNIVNYLD-------SYLvgDELWVVMEYLAGGS 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYY 154
Cdd:cd06647    91 LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYW 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDlLGTPSLEamrtacegakahilrGPHKQPSL 234
Cdd:cd06647   170 MAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQ---------------NPEKLSAI 232
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 235 pvlytlssqatheAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06647   233 -------------FRDFLNRCLEMDVEKRGSAKELLQHPFL 260
PKc_DYRK2_3 cd14224
Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and ...
3-275 1.31e-19

Catalytic domain of the protein kinases, Dual-specificity tYrosine-phosphorylated and -Regulated Kinases 2 and 3; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of DYRK2 and DYRK3, and similar proteins. Drosophila DYRK2 interacts and phosphorylates the chromatin remodelling factor, SNR1 (Snf5-related 1), and also interacts with the essential chromatin component, trithorax. It may play a role in chromatin remodelling. Vertebrate DYRK2 phosphorylates and regulates the tumor suppressor p53 to induce apoptosis in response to DNA damage. It can also phosphorylate the transcription factor, nuclear factor of activated T cells (NFAT). DYRK2 is overexpressed in lung adenocarcinoma and esophageal carcinomas, and is a predictor for favorable prognosis in lung adenocarcinoma. DYRK3, also called regulatory erythroid kinase (REDK), is highly expressed in erythroid cells and the testis, and is also present in adult kidney and liver. It promotes cell survival by phosphorylating and activating SIRT1, an NAD(+)-dependent protein deacetylase, which promotes p53 deacetylation, resulting in the inhibition of apoptosis. DYRKs autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. The DYRK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other S/T kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271126 [Multi-domain]  Cd Length: 380  Bit Score: 89.04  E-value: 1.31e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVfqnlvscKRVFR----ELKMLCFFKH---DNVLSALDILQppHIDYFEEIYVVTELMQSDLH 75
Cdd:cd14224    84 AYDHKTHQHVALKMVRNE-------KRFHRqaaeEIRILEHLKKqdkDNTMNVIHMLE--SFTFRNHICMTFELLSMNLY 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN--CVLKICDFGlarvEELDESRHMTQEVVT 151
Cdd:cd14224   155 ELIKKNkfQGFSLQLVRKFAHSILQCLDALHRNKIIHCDLKPENILLKQQgrSGIKVIDFG----SSCYEHQRIYTYIQS 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 152 QYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSlEAMRTACEGAKAHI------- 224
Cdd:cd14224   231 RFYRAPEVILGAR-YGMPIDMWSFGCILAELLTGYPLFPGEDEGDQLACMIELLGMPP-QKLLETSKRAKNFIsskgypr 308
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 225 -----------------------LRGPHKQPSLpvLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14224   309 yctvttlpdgsvvlnggrsrrgkMRGPPGSKDW--VTALKGCDDPLFLDFLKRCLEWDPAARMTPSQALRHPWL 380
STKc_DCKL3 cd14185
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called ...
33-274 1.50e-19

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called Doublecortin-like and CAM kinase-like 3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL3 (or DCAMKL3) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. DCKL3 contains a single DCX domain (instead of a tandem) and a C-terminal kinase domain with similarity to CAMKs. It has been shown to interact with tubulin and JIP1/2. The DCKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271087 [Multi-domain]  Cd Length: 258  Bit Score: 86.93  E-value: 1.50e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd14185    48 EILIIKSLSHPNIVKLFEVYETE-----KEIYLILEYVRGgDLFDAIIESVKFTEHDAALMIIDLCEALVYIHSKHIVHR 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLVNSN----CVLKICDFGLArveeldesRHMTQEVV----TQYYRAPEILMGsRHYSNAIDIWSVGCIFAELL 183
Cdd:cd14185   123 DLKPENLLVQHNpdksTTLKLADFGLA--------KYVTGPIFtvcgTPTYVAPEILSE-KGYGLEVDMWAAGVILYILL 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 184 GRRILFQAQSPIQQldlitDLLgtpsleamrtacegakaHILRGPHKQPSLPVLYTLSSqathEAVHLLCRMLVFDPSKR 263
Cdd:cd14185   194 CGFPPFRSPERDQE-----ELF-----------------QIIQLGHYEFLPPYWDNISE----AAKDLISRLLVVDPEKR 247
                         250
                  ....*....|.
gi 1907080392 264 ISAKDALAHPY 274
Cdd:cd14185   248 YTAKQVLQHPW 258
STKc_PKD cd14082
Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer ...
61-178 1.63e-19

Catalytic domain of the Serine/Threonine kinase, Protein Kinase D; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKDs are important regulators of many intracellular signaling pathways such as ERK and JNK, and cellular processes including the organization of the trans-Golgi network, membrane trafficking, cell proliferation, migration, and apoptosis. They contain N-terminal cysteine-rich zinc binding C1 (PKC conserved region 1), central PH (Pleckstrin Homology), and C-terminal catalytic kinase domains. Mammals harbor three types of PKDs: PKD1 (or PKCmu), PKD2, and PKD3 (or PKCnu). PKDs are activated in a PKC-dependent manner by many agents including diacylglycerol (DAG), PDGF, neuropeptides, oxidative stress, and tumor-promoting phorbol esters, among others. The PKD subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270984 [Multi-domain]  Cd Length: 260  Bit Score: 87.08  E-value: 1.63e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQSDLHKIIVSPQP--LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC---VLKICDFGLAR 135
Cdd:cd14082    75 ERVFVVMEKLHGDMLEMILSSEKgrLPERITKFLVTQILVALRYLHSKNIVHCDLKPENVLLASAEpfpQVKLCDFGFAR 154
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1907080392 136 VeeLDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCI 178
Cdd:cd14082   155 I--IGEKSFRRSVVGTPAYLAPEVLR-NKGYNRSLDMWSVGVI 194
STKc_GAK_like cd13985
Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of ...
9-200 1.98e-19

Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes cyclin G-Associated Kinase (GAK), Drosophila melanogaster Numb-Associated Kinase (NAK)-like proteins, and similar protein kinases. GAK plays regulatory roles in clathrin-mediated membrane trafficking, the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses. NAK plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. The GAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270887 [Multi-domain]  Cd Length: 272  Bit Score: 87.00  E-value: 1.98e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpnVFQNLVSCKRVFREL---KMLCffKHDNVLSALD--ILQPPHIdyfEEIYVVTELMQSDLHKIIVS--P 81
Cdd:cd13985    25 GRRYALKRM--YFNDEEQLRVAIKEIeimKRLC--GHPNIVQYYDsaILSSEGR---KEVLLLMEYCPGSLVDILEKspP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLARVE----ELDESRHMTQEVVTQY-- 153
Cdd:cd13985    98 SPLSEEEVLRIFYQICQAVGHLHSQSppIIHRDIKIENILFSNTGRFKLCDFGSATTEhyplERAEEVNIIEEEIQKNtt 177
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 154 --YRAPEILMGSRHY--SNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDL 200
Cdd:cd13985   178 pmYRAPEMIDLYSKKpiGEKADIWALGCLLYKLCFFKLPFDESSKLAIVAG 228
STKc_Nek6_7 cd08224
Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related ...
8-182 1.99e-19

Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related kinase 6 and 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Nek6/7 is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270863 [Multi-domain]  Cd Length: 262  Bit Score: 86.94  E-value: 1.99e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMpNVFQNLVSCKR--VFRELKMLCFFKHDNVLSALDilqpphiDYFE--EIYVVTELMQS-DLHKII---- 78
Cdd:cd08224    24 DGRLVALKKV-QIFEMMDAKARqdCLKEIDLLQQLNHPNIIKYLA-------SFIEnnELNIVLELADAgDLSRLIkhfk 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeldESRHMTQE---VVTQYYR 155
Cdd:cd08224    96 KQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITANGVVKLGDLGLGRF----FSSKTTAAhslVGTPYYM 171
                         170       180
                  ....*....|....*....|....*..
gi 1907080392 156 APEILMGSrHYSNAIDIWSVGCIFAEL 182
Cdd:cd08224   172 SPERIREQ-GYDFKSDIWSLGCLLYEM 197
STKc_MEKK1 cd06630
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
27-273 2.49e-19

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK1 is a MAPK kinase kinase (MAPKKK or MKKK) that phosphorylates and activates activates the ERK1/2 and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270800 [Multi-domain]  Cd Length: 268  Bit Score: 86.71  E-value: 2.49e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  27 CKRVFRELKMLCFFKHDNVLSALDILQppHIDYFEeiyVVTELM-----QSDLHKIivspQPLSSDHVKVFLYQILRGLK 101
Cdd:cd06630    47 VEAIREEIRMMARLNHPNIVRMLGATQ--HKSHFN---IFVEWMaggsvASLLSKY----GAFSENVIINYTLQILRGLA 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 102 YLHSAGILHRDIKPGNLLVNSNC-VLKICDFGLA--------RVEELDesrhmTQEVVTQYYRAPEILMGsRHYSNAIDI 172
Cdd:cd06630   118 YLHDNQIIHRDLKGANLLVDSTGqRLRIADFGAAarlaskgtGAGEFQ-----GQLLGTIAFMAPEVLRG-EQYGRSCDV 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 173 WSVGCIFAELLGRRILFQAQSPIQQLDLItdllgtpsleaMRTACEgakahilRGPhkqPSLPVLYTLSSQatheavHLL 252
Cdd:cd06630   192 WSVGCVIIEMATAKPPWNAEKISNHLALI-----------FKIASA-------TTP---PPIPEHLSPGLR------DVT 244
                         250       260
                  ....*....|....*....|.
gi 1907080392 253 CRMLVFDPSKRISAKDALAHP 273
Cdd:cd06630   245 LRCLELQPEDRPPARELLKHP 265
STKc_MAPKAPK5 cd14171
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
9-275 2.89e-19

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 5 (MAPKAP5 or MK5) is also called PRAK (p38-regulated/activated protein kinase). It contains a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271073 [Multi-domain]  Cd Length: 289  Bit Score: 86.75  E-value: 2.89e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKmpnvfqnLVSCKRVFRE--LKMLCFfKHDNVLSALDI----LQPPHIDYFE-EIYVVTELMQS-DLHKIIVS 80
Cdd:cd14171    31 GERFALKI-------LLDRPKARTEvrLHMMCS-GHPNIVQIYDVyansVQFPGESSPRaRLLIVMELMEGgELFDRISQ 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN---CVLKICDFGLARVeelDESRHMTQEVvTQYYRAP 157
Cdd:cd14171   103 HRHFTEKQAAQYTKQIALAVQHCHSLNIAHRDLKPENLLLKDNsedAPIKLCDFGFAKV---DQGDLMTPQF-TPYYVAP 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMGSRH----------------YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgTPSLeamrtacegaK 221
Cdd:cd14171   179 QVLEAQRRhrkersgiptsptpytYDKSCDMWSLGVIIYIMLCGYPPFYSEHPSRTI--------TKDM----------K 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 222 AHILRGPHKQPSlpvlyTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14171   241 RKIMTGSYEFPE-----EEWSQISEMAKDIVRKLLCVDPEERMTIEEVLHHPWL 289
STKc_DCKL2 cd14184
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called ...
33-274 3.41e-19

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 2 (also called Doublecortin-like and CAM kinase-like 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL2 (or DCAMKL2) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL2 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL2 has been shown to interact with tubulin, JIP1/2, JNK, neurabin 2, and actin. It is associated with the terminal segments of axons and dendrites, and may function as a phosphorylation-dependent switch to control microtubule dynamics in neuronal growth cones. The DCKL2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271086 [Multi-domain]  Cd Length: 259  Bit Score: 86.24  E-value: 3.41e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd14184    49 EVSILRRVKHPNIIMLIEEMDTP-----AELYLVMELVKGgDLFDAITSSTKYTERDASAMVYNLASALKYLHGLCIVHR 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLV----NSNCVLKICDFGLARVEEldesRHMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELLGRRI 187
Cdd:cd14184   124 DIKPENLLVceypDGTKSLKLGDFGLATVVE----GPLYTVCGTPTYVAPEIIAET-GYGLKVDIWAAGVITYILLCGFP 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 LFQAQSPIQQldlitDLLGtpsleamrtacegakaHILRGPHKQPSlPVLYTLSSQATheavHLLCRMLVFDPSKRISAK 267
Cdd:cd14184   199 PFRSENNLQE-----DLFD----------------QILLGKLEFPS-PYWDNITDSAK----ELISHMLQVNVEARYTAE 252

                  ....*..
gi 1907080392 268 DALAHPY 274
Cdd:cd14184   253 QILSHPW 259
STKc_MARK cd14072
Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; ...
9-265 3.44e-19

Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MARKs, also called Partitioning-defective 1 (Par1) proteins, function as regulators of diverse cellular processes in nematodes, Drosophila, yeast, and vertebrates. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. Vertebrates contain four isoforms, namely MARK1 (or Par1c), MARK2 (or Par1b), MARK3 (Par1a), and MARK4 (or MARKL1). Known substrates of MARKs include the cell cycle-regulating phosphatase Cdc25, tyrosine phosphatase PTPH1, MAPK scaffolding protein KSR1, class IIa histone deacetylases, and plakophilin 2. The MARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270974 [Multi-domain]  Cd Length: 253  Bit Score: 86.03  E-value: 3.44e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDIlqpphIDYFEEIYVVTELMQS-DLHKIIVSPQPLSSD 87
Cdd:cd14072    25 GREVAIKIIDKTQLNPSSLQKLFREVRIMKILNHPNIVKLFEV-----IETEKTLYLVMEYASGgEVFDYLVAHGRMKEK 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMGSRHYS 167
Cdd:cd14072   100 EARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS--NEFTPGNKLDTFCGSPPYAAPELFQGKKYDG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NAIDIWSVGCIFAELLGRRILFQAQspiqqldlitdllgtpSLEAMRtacegakAHILRGPHKQPslpvlYTLSSqathE 247
Cdd:cd14072   178 PEVDVWSLGVILYTLVSGSLPFDGQ----------------NLKELR-------ERVLRGKYRIP-----FYMST----D 225
                         250
                  ....*....|....*...
gi 1907080392 248 AVHLLCRMLVFDPSKRIS 265
Cdd:cd14072   226 CENLLKKFLVLNPSKRGT 243
STKc_RSK2_C cd14176
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called ...
36-275 3.52e-19

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 2 (also called 90kDa ribosomal protein S6 kinase 3 or Ribosomal protein S6 kinase alpha-3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK2 is also called p90RSK3, RPS6KA3, S6K-alpha-3, or MAPK-activated protein kinase 1b (MAPKAPK-1b). RSK2 is expressed highly in the regions of the brain with high synaptic activity. It plays a role in the maintenance and consolidation of excitatory synapses. It is a specific modulator of phospholipase D in calcium-regulated exocytosis. Mutations in the RSK2 gene, RPS6KA3, cause Coffin-Lowry syndrome (CLS), a rare syndromic form of X-linked mental retardation characterized by growth and psychomotor retardation and skeletal abnormalities. RSK2 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271078 [Multi-domain]  Cd Length: 339  Bit Score: 87.38  E-value: 3.52e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  36 MLCFFKHDNVLSALDILqpphiDYFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIK 114
Cdd:cd14176    66 LLRYGQHPNIITLKDVY-----DDGKYVYVVTELMKGgELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLK 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 115 PGNLLVNSNC----VLKICDFGLARVEELDESRHMTqEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIfaellgrrilfq 190
Cdd:cd14176   141 PSNILYVDESgnpeSIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLE-RQGYDAACDIWSLGVL------------ 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 191 aqspiqqldLITDLLG-TPSLEAMRTACEGAKAHILRGPhkqpslpvlYTLS----SQATHEAVHLLCRMLVFDPSKRIS 265
Cdd:cd14176   207 ---------LYTMLTGyTPFANGPDDTPEEILARIGSGK---------FSLSggywNSVSDTAKDLVSKMLHVDPHQRLT 268
                         250
                  ....*....|
gi 1907080392 266 AKDALAHPYL 275
Cdd:cd14176   269 AALVLRHPWI 278
STKc_SPEG_rpt2 cd14111
Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle ...
85-275 3.63e-19

Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271013 [Multi-domain]  Cd Length: 257  Bit Score: 86.03  E-value: 3.63e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSR 164
Cdd:cd14111    97 SEDDVVGYLVQILQGLEYLHGRRVLHLDIKPDNIMVTNLNAIKIVDFGSAQSFNPLSLRQLGRRTGTLEYMAPEMVKGEP 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 hYSNAIDIWSVGCIFAELLGRRILFQAQSPIQqldlitdllgtpsleamrtacegAKAHILRG---PHKqpslpvLYTLS 241
Cdd:cd14111   177 -VGPPADIWSIGVLTYIMLSGRSPFEDQDPQE-----------------------TEAKILVAkfdAFK------LYPNV 226
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907080392 242 SQAtheAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14111   227 SQS---ASLFLKKVLSSYPWSRPTTKDCFAHAWL 257
STKc_PhKG2 cd14181
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs ...
57-275 4.68e-19

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 2 subunit (PhKG2) is also referred to as the testis/liver gamma isoform. Mutations in its gene cause autosomal-recessive glycogenosis of the liver. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271083 [Multi-domain]  Cd Length: 279  Bit Score: 86.18  E-value: 4.68e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  57 IDYFEE---IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFG 132
Cdd:cd14181    82 IDSYESstfIFLVFDLMRrGELFDYLTEKVTLSEKETRSIMRSLLEAVSYLHANNIVHRDLKPENILLDDQLHIKLSDFG 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 133 LARVEELDESrhMTQEVVTQYYRAPEIL---MGSRH--YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDllgt 207
Cdd:cd14181   162 FSCHLEPGEK--LRELCGTPGYLAPEILkcsMDETHpgYGKEVDLWACGVILFTLLAGSPPFWHRRQMLMLRMIME---- 235
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 208 psleamrtacegakahilrgPHKQPSLPVLYTLSSQATheavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14181   236 --------------------GRYQFSSPEWDDRSSTVK----DLISRLLVVDPEIRLTAEQALQHPFF 279
STKc_cGK cd05572
Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); ...
63-183 4.92e-19

Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270724 [Multi-domain]  Cd Length: 262  Bit Score: 85.74  E-value: 4.92e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEeldE 141
Cdd:cd05572    68 LYMLMEYCLGgELWTILRDRGLFDEYTARFYTACVVLAFEYLHSRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKL---G 144
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1907080392 142 SRHMTQEVV-TQYYRAPEILMGsRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05572   145 SGRKTWTFCgTPEYVAPEIILN-KGYDFSVDYWSLGILLYELL 186
STKc_HIPK cd14211
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase; STKs ...
64-275 5.08e-19

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). They show speckled localization in the nucleus, apart from the nucleoles. They play roles in the regulation of many nuclear pathways including gene transcription, cell survival, proliferation, differentiation, development, and DNA damage response. Vertebrates contain three HIPKs (HIPK1-3) and mammals harbor an additional family member HIPK4, which does not contain a homeobox-interacting domain and is localized in the cytoplasm. HIPK2, the most studied HIPK, is a coregulator of many transcription factors and cofactors and it regulates gene transcription during development and in DNA damage response. The HIPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271113 [Multi-domain]  Cd Length: 329  Bit Score: 86.73  E-value: 5.08e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  64 YVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNCV---LKICDFGLArve 137
Cdd:cd14211    76 CLVFEMLEQNLYDFLKQNkfSPLPLKYIRPILQQVLTALLKLKSLGLIHADLKPENiMLVDPVRQpyrVKVIDFGSA--- 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 138 eldesRHMTQEVV-----TQYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSlEA 212
Cdd:cd14211   153 -----SHVSKAVCstylqSRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGSSEYDQIRYISQTQGLPA-EH 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 213 MRTACEGAKAHILRGPHkqPSLPvLYTLSSQATHEA-------------------------------------------- 248
Cdd:cd14211   226 LLNAATKTSRFFNRDPD--SPYP-LWRLKTPEEHEAetgikskearkyifnclddmaqvngpsdlegsellaekadrref 302
                         250       260
                  ....*....|....*....|....*..
gi 1907080392 249 VHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14211   303 IDLLKRMLTIDQERRITPGEALNHPFV 329
STKc_EIF2AK3_PERK cd14048
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
10-272 5.74e-19

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 3 or PKR-like Endoplasmic Reticulum Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PERK (or EIF2AK3) is a type-I ER transmembrane protein containing a luminal domain bound with the chaperone BiP under unstressed conditions and a cytoplasmic catalytic kinase domain. In response to the accumulation of misfolded or unfolded proteins in the ER, PERK is activated through the release of BiP, allowing it to dimerize and autophosphorylate. It functions as the central regulator of translational control during the Unfolded Protein Response (UPR) pathway. In addition to the eIF-2 alpha subunit, PERK also phosphorylates Nrf2, a leucine zipper transcription factor which regulates cellular redox status and promotes cell survival during the UPR. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PERK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270950 [Multi-domain]  Cd Length: 281  Bit Score: 86.08  E-value: 5.74e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALkkmPNvfqNLVSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIDYFEE-----IYVVTEL-MQSDLHKIIVSPQ 82
Cdd:cd14048    37 KRIRL---PN---NELAREKVLREVRALAKLDHPGIVRYFNAwLERPPEGWQEKmdevyLYIQMQLcRKENLKDWMNRRC 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLY---QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDE------------SRHmTQ 147
Cdd:cd14048   111 TMESRELFVCLNifkQIASAVEYLHSKGLIHRDLKPSNVFFSLDDVVKVGDFGLVTAMDQGEpeqtvltpmpayAKH-TG 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 148 EVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLgrrILFQAQSpiqqldlitdllgtpslEAMRTACEGAKAHIlrg 227
Cdd:cd14048   190 QVGTRLYMSPEQIHGNQ-YSEKVDIFALGLILFELI---YSFSTQM-----------------ERIRTLTDVRKLKF--- 245
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392 228 phkqpslPVLYTLSSQATHEAVHllcRMLVFDPSKRISAKDALAH 272
Cdd:cd14048   246 -------PALFTNKYPEERDMVQ---QMLSPSPSERPEAHEVIEH 280
PTKc_Wee1_fungi cd14052
Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the ...
3-273 1.36e-18

Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of fungal Wee1 proteins, also called Swe1 in budding yeast and Mik1 in fission yeast. Yeast Wee1 is required to control cell size. Wee1 is a cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. The fungal Wee1 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270954 [Multi-domain]  Cd Length: 278  Bit Score: 84.78  E-value: 1.36e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRD-GKRVALKKMPNVFQNLVSCKRVFRE---LKMLCFFKHDNVLSALDILQpphidYFEEIYVVTELMQSDLHKII 78
Cdd:cd14052    19 VSERVPtGKVYAVKKLKPNYAGAKDRLRRLEEvsiLRELTLDGHDNIVQLIDSWE-----YHGHLYIQTELCENGSLDVF 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSS--DHVKVF--LYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVtqyY 154
Cdd:cd14052    94 LSELGLLGrlDEFRVWkiLVELSLGLRFIHDHHFVHLDLKPANVLITFEGTLKIGDFGMATVWPLIRGIEREGDRE---Y 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQL--DLITDLlgtPSLEAMRTAceGAKAHILRGPHKQP 232
Cdd:cd14052   171 IAPEILS-EHMYDKPADIFSLGLILLEAAANVVLPDNGDAWQKLrsGDLSDA---PRLSSTDLH--SASSPSSNPPPDPP 244
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 233 SLPVLytlsSQATheaVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd14052   245 NMPIL----SGSL---DRVVRWMLSPEPDRRPTADDVLATP 278
STKc_EIF2AK1_HRI cd14049
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
8-183 1.55e-18

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Heme-Regulated Inhibitor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HRI (or EIF2AK1) contains an N-terminal regulatory heme-binding domain and a C-terminal catalytic kinase domain. It is suppressed under normal conditions by binding of the heme iron, and is activated during heme deficiency. It functions as a critical regulator that ensures balanced synthesis of globins and heme, in order to form stable hemoglobin during erythroid differentiation and maturation. HRI also protects cells and enhances survival under iron-deficient conditions. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The HRI subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270951 [Multi-domain]  Cd Length: 284  Bit Score: 84.87  E-value: 1.55e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLsaldilqPPHIDYFEEI----YVVTELMQSDLHKIIVS--- 80
Cdd:cd14049    30 DGQYYAIKKILIKKVTKRDCMKVLREVKVLAGLQHPNIV-------GYHTAWMEHVqlmlYIQMQLCELSLWDWIVErnk 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 -PQ----------PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKICDFGLARVEELDESR----- 143
Cdd:cd14049   103 rPCeeefksapytPVDVDVTTKILQQLLEGVTYIHSMGIVHRDLKPRNIFLHgSDIHVRIGDFGLACPDILQDGNdsttm 182
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1907080392 144 ------HMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELL 183
Cdd:cd14049   183 srlnglTHTSGVGTCLYAAPEQLEGS-HYDFKSDMYSIGVILLELF 227
STKc_obscurin_rpt1 cd14107
Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
29-275 1.62e-18

Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271009 [Multi-domain]  Cd Length: 257  Bit Score: 84.17  E-value: 1.62e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKMLCFFKHDNVLSALDilqpphidYFEE---IYVVTELMQSD-LHKIIVSPQPLSSDHVKVFLYQILRGLKYLH 104
Cdd:cd14107    44 RAFQERDILARLSHRRLTCLLD--------QFETrktLILILELCSSEeLLDRLFLKGVVTEAEVKLYIQQVLEGIGYLH 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 105 SAGILHRDIKPGNLLVNSNCV--LKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAEL 182
Cdd:cd14107   116 GMNILHLDIKPDNILMVSPTRedIKICDFGFA--QEITPSEHQFSKYGSPEFVAPEIVHQEP-VSAATDIWALGVIAYLS 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 183 LGRRILFQAQSpiqqlDLITDLlgtpsleamrtacegakaHILRGphkqpslpVLYTLSSQATH---EAVHLLCRMLVFD 259
Cdd:cd14107   193 LTCHSPFAGEN-----DRATLL------------------NVAEG--------VVSWDTPEITHlseDAKDFIKRVLQPD 241
                         250
                  ....*....|....*.
gi 1907080392 260 PSKRISAKDALAHPYL 275
Cdd:cd14107   242 PEKRPSASECLSHEWF 257
STKc_TAO cd06607
Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs ...
12-275 1.63e-18

Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270784 [Multi-domain]  Cd Length: 258  Bit Score: 84.04  E-value: 1.63e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMP-NVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTElmQSDLhkIIVSPQPLSSDHVK 90
Cdd:cd06607    29 VAIKKMSySGKQSTEKWQDIIKEVKFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLGS--ASDI--VEVHKKPLQEVEIA 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhmtqeVVTQYYRAPEIL--MGSRHYSN 168
Cdd:cd06607   105 AICHGALQGLAYLHSHNRIHRDVKAGNILLTEPGTVKLADFGSASLVCPANSF-----VGTPYWMAPEVIlaMDEGQYDG 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 169 AIDIWSVG--CIfaELLGRR-ILFqaqspiqqldlitdllgtpSLEAMrtaceGAKAHILRgpHKQPSLPvlytlSSQAT 245
Cdd:cd06607   180 KVDVWSLGitCI--ELAERKpPLF-------------------NMNAM-----SALYHIAQ--NDSPTLS-----SGEWS 226
                         250       260       270
                  ....*....|....*....|....*....|
gi 1907080392 246 HEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06607   227 DDFRNFVDSCLQKIPQDRPSAEDLLKHPFV 256
STKc_CaMKI_beta cd14169
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
10-275 1.79e-18

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271071 [Multi-domain]  Cd Length: 277  Bit Score: 84.56  E-value: 1.79e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPnvfqnlvscKRVFR--------ELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVS 80
Cdd:cd14169    29 RLVALKCIP---------KKALRgkeamvenEIAVLRRINHENIVSLEDIYESP-----THLYLAMELVTGgELFDRIIE 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEeldESRHMTQEVVTQYYRAP 157
Cdd:cd14169    95 RGSYTEKDASQLIGQVLQAVKYLHQLGIVHRDLKPENLLYATpfeDSKIMISDFGLSKIE---AQGMLSTACGTPGYVAP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 158 EILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLitdllgtpsleamrtacegakahILRGPHKQPSlPVL 237
Cdd:cd14169   172 ELLE-QKPYGKAVDVWAIGVISYILLCGYPPFYDENDSELFNQ-----------------------ILKAEYEFDS-PYW 226
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1907080392 238 YTLSSQATHEAVHLLCRmlvfDPSKRISAKDALAHPYL 275
Cdd:cd14169   227 DDISESAKDFIRHLLER----DPEKRFTCEQALQHPWI 260
STKc_NUAK2 cd14161
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs ...
7-272 2.23e-18

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. NUAK2 is implicated in regulating actin stress fiber assembly through its association with myosin phosphatase Rho-interacting protein (MRIP), which leads to an increase in myosin regulatory light chain (MLC) phosphorylation. It is also associated with tumor growth, migration, and oncogenicity of melanoma cells. The NUAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271063 [Multi-domain]  Cd Length: 255  Bit Score: 83.85  E-value: 2.23e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKM-PNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELM-QSDLHKIIVSPQPL 84
Cdd:cd14161    25 SSGRLVAIKSIrKDRIKDEQDLLHIRREIEIMSSLNHPHIISVYEVFENS-----SKIVIVMEYAsRGDLYDYISERQRL 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDesRHMTQEVVTQYYRAPEILMGSR 164
Cdd:cd14161   100 SELEARHFFRQIVSAVHYCHANGIVHRDLKLENILLDANGNIKIADFGLSNLYNQD--KFLQTYCGSPLYASPEIVNGRP 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 HYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDllgtpsleamrtacegakahilrGPHKQPSLPvlytlssqa 244
Cdd:cd14161   178 YIGPEVDSWSLGVLLYILVHGTMPFDGHDYKILVKQISS-----------------------GAYREPTKP--------- 225
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 245 tHEAVHLLCRMLVFDPSKRISAKDALAH 272
Cdd:cd14161   226 -SDACGLIRWLLMVNPERRATLEDVASH 252
STKc_SLK_like cd06611
Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the ...
33-277 2.24e-18

Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the subfamily include SLK, STK10 (also called LOK for Lymphocyte-Oriented Kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132942 [Multi-domain]  Cd Length: 280  Bit Score: 84.02  E-value: 2.24e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDIlqpphidYFEE--IYVVTELMQSD-LHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGI 108
Cdd:cd06611    52 EIDILSECKHPNIVGLYEA-------YFYEnkLWILIEFCDGGaLDSIMLElERGLTEPQIRYVCRQMLEALNFLHSHKV 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 109 LHRDIKPGNLLVNSNCVLKICDFGL-ARVEELDESRHMTqeVVTQYYRAPEILM----GSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd06611   125 IHRDLKAGNILLTLDGDVKLADFGVsAKNKSTLQKRDTF--IGTPYWMAPEVVAcetfKDNPYDYKADIWSLGITLIELA 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 184 GRRILFQAQSPIQQLdlitdllgtpsleamrtacegakAHILRGPHkqpslPVLYTlSSQATHEAVHLLCRMLVFDPSKR 263
Cdd:cd06611   203 QMEPPHHELNPMRVL-----------------------LKILKSEP-----PTLDQ-PSKWSSSFNDFLKSCLVKDPDDR 253
                         250
                  ....*....|....
gi 1907080392 264 ISAKDALAHPYLDE 277
Cdd:cd06611   254 PTAAELLKHPFVSD 267
STKc_DAPK1 cd14194
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs ...
25-275 3.07e-18

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. It is Ca2+/calmodulin (CaM)-regulated and actin-associated protein that contains an N-terminal kinase domain followed by an autoinhibitory CaM binding region and a large C-terminal extension with multiple functional domains including ankyrin (ANK) repeats, a cytoskeletal binding domain, a Death domain, and a serine-rich tail. Loss of DAPK1 expression, usually because of DNA methylation, is implicated in many tumor types. DAPK1 is highly abundant in the brain and has also been associated with neurodegeneration. The DAPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271096 [Multi-domain]  Cd Length: 269  Bit Score: 83.53  E-value: 3.07e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  25 VSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYL 103
Cdd:cd14194    50 VSREDIEREVSILKEIQHPNVITLHEVYENKT-----DVILILELVAGgELFDFLAEKESLTEEEATEFLKQILNGVYYL 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 104 HSAGILHRDIKPGN-LLVNSNCV---LKICDFGLArvEELDESRHMTQEVVTQYYRAPEILmgsrHYSN---AIDIWSVG 176
Cdd:cd14194   125 HSLQIAHFDLKPENiMLLDRNVPkprIKIIDFGLA--HKIDFGNEFKNIFGTPEFVAPEIV----NYEPlglEADMWSIG 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 177 CIfaellgRRILFQAQSPiqqldlitdllgtpsleamrtacegakahiLRGPHKQPSLPVLYTLS--------SQATHEA 248
Cdd:cd14194   199 VI------TYILLSGASP------------------------------FLGDTKQETLANVSAVNyefedeyfSNTSALA 242
                         250       260
                  ....*....|....*....|....*..
gi 1907080392 249 VHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14194   243 KDFIRRLLVKDPKKRMTIQDSLQHPWI 269
STKc_HIPK3 cd14229
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 3; ...
65-275 4.10e-18

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK3 is a Fas-interacting protein that induces FADD (Fas-associated death domain) phosphorylation and mediates FasL-induced JNK activation. Overexpression of HIPK3 does not affect cell death, however its expression in prostate cancer cells contributes to increased resistance to Fas receptor-mediated apoptosis. HIPK3 also plays a role in regulating steroidogenic gene expression. In response to cAMP, HIPK3 activates the phosphorylation of JNK and c-Jun, leading to increased activity of the transcription factor SF-1 (Steroidogenic factor 1), a key regulator for steroid biosynthesis in the gonad and adrenal gland. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271131 [Multi-domain]  Cd Length: 330  Bit Score: 84.31  E-value: 4.10e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  65 VVTELMQSDLHKII----VSPQPLSSdhVKVFLYQILRGLKYLHSAGILHRDIKPGNLL----VNSNCVLKICDFGLARv 136
Cdd:cd14229    78 LVFEMLEQNLYDFLkqnkFSPLPLKV--IRPILQQVATALKKLKSLGLIHADLKPENIMlvdpVRQPYRVKVIDFGSAS- 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 137 eeldesrHMTQEVVT-----QYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLE 211
Cdd:cd14229   155 -------HVSKTVCStylqsRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGALEYDQIRYISQTQGLPGEQ 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 212 AMRTACEGAKAHIlrgphKQPSLPV-LYTLSSQATHEA------------------------------------------ 248
Cdd:cd14229   227 LLNVGTKTSRFFC-----RETDAPYsSWRLKTLEEHEAetgmkskearkyifnslddiahvnmvmdlegsdllaekadrr 301
                         250       260
                  ....*....|....*....|....*....
gi 1907080392 249 --VHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14229   302 efVALLKKMLLIDADLRITPADTLSHPFV 330
STKc_GAK cd14036
Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs ...
5-270 5.05e-18

Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GAK, also called auxilin-2, contains an N-terminal kinase domain that phosphorylates the mu subunits of adaptor protein (AP) 1 and AP2. In addition, it contains an auxilin-1-like domain structure consisting of PTEN-like, clathrin-binding, and J domains. Like auxilin-1, GAK facilitates Hsc70-mediated dissociation of clathrin from clathrin-coated vesicles. GAK is expressed ubiquitously and is enriched in the Golgi, unlike auxilin-1 which is nerve-specific. GAK also plays regulatory roles outside of clathrin-mediated membrane traffic including the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses through interaction with the interleukin 12 receptor. It also interacts with the androgen receptor, acting as a transcriptional coactivator, and its expression is significantly increased with the progression of prostate cancer. The GAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270938 [Multi-domain]  Cd Length: 282  Bit Score: 83.33  E-value: 5.05e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMpnVFQNLVSCKRVFRELkmlCFFK----HDNVL---SALDILQPPHIDYFEEIYVVTELMQS---DL 74
Cdd:cd14036    21 DVGTGKEYALKRL--LSNEEEKNKAIIQEI---NFMKklsgHPNIVqfcSAASIGKEESDQGQAEYLLLTELCKGqlvDF 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKIIVSPQPLSSDHVKVFLYQILRGLKYLH--SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEL--DES-----RHM 145
Cdd:cd14036    96 VKKVEAPGPFSPDTVLKIFYQTCRAVQHMHkqSPPIIHRDLKIENLLIGNQGQIKLCDFGSATTEAHypDYSwsaqkRSL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 146 TQE----VVTQYYRAPEILmgsRHYSN-----AIDIWSVGCIFAELLGRRILFQaqspiqqldlitdllgtpsleamrta 216
Cdd:cd14036   176 VEDeitrNTTPMYRTPEMI---DLYSNypigeKQDIWALGCILYLLCFRKHPFE-------------------------- 226
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 217 cEGAKAHILRGPHKQPSLPVLYTLSSQatheavhLLCRMLVFDPSKRISAKDAL 270
Cdd:cd14036   227 -DGAKLRIINAKYTIPPNDTQYTVFHD-------LIRSTLKVNPEERLSITEIV 272
STKc_TLK cd13990
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the ...
28-198 5.11e-18

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. They phosphorylate and regulate Anti-silencing function 1 protein (Asf1), a histone H3/H4 chaperone that helps facilitate the assembly of chromatin following DNA replication during S phase. TLKs also phosphorylate the H3 histone tail and are essential in transcription. Vertebrates contain two subfamily members, TLK1 and TLK2. The TLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270892 [Multi-domain]  Cd Length: 279  Bit Score: 83.14  E-value: 5.11e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILqppHIDYfEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYL--H 104
Cdd:cd13990    49 KHALREYEIHKSLDHPRIVKLYDVF---EIDT-DSFCTVLEYCDgNDLDFYLKQHKSIPEREARSIIMQVVSALKYLneI 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 105 SAGILHRDIKPGNLLVNSNCV---LKICDFGLARV--EELDESRHM---TQEVVTQYYRAPEILM---GSRHYSNAIDIW 173
Cdd:cd13990   125 KPPIIHYDLKPGNILLHSGNVsgeIKITDFGLSKImdDESYNSDGMeltSQGAGTYWYLPPECFVvgkTPPKISSKVDVW 204
                         170       180
                  ....*....|....*....|....*.
gi 1907080392 174 SVGCIFAELL-GRRILFQAQSPIQQL 198
Cdd:cd13990   205 SVGVIFYQMLyGRKPFGHNQSQEAIL 230
STKc_MLCK cd14103
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the ...
30-275 6.39e-18

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module. MLCK2, MLCK3, and MLCK4 share a simpler domain architecture of a single kinase domain near the C-terminus and the absence of Ig-like or FN3 domains. The MLCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271005 [Multi-domain]  Cd Length: 250  Bit Score: 82.27  E-value: 6.39e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQSD--LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14103    37 VRNEIEIMNQLRHPRLLQLYDAFETPR-----EMVLVMEYVAGGelFERVVDDDFELTERDCILFMRQICEGVQYMHKQG 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLvnsnCV------LKICDFGLARVEELDES-RHM--TQEVVtqyyrAPEILmgsrHY---SNAIDIWSV 175
Cdd:cd14103   112 ILHLDLKPENIL----CVsrtgnqIKIIDFGLARKYDPDKKlKVLfgTPEFV-----APEVV----NYepiSYATDMWSV 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 176 GCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHIlrgphkqpslpvlytlssqatheavhllCRM 255
Cdd:cd14103   179 GVICYVLLSGLSPFMGDNDAETLANVTRAKWDFDDEAFDDISDEAKDFI----------------------------SKL 230
                         250       260
                  ....*....|....*....|
gi 1907080392 256 LVFDPSKRISAKDALAHPYL 275
Cdd:cd14103   231 LVKDPRKRMSAAQCLQHPWL 250
STKc_CaMKIV cd14085
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
10-277 6.47e-18

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type IV; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKIV is found predominantly in neurons and immune cells. It is activated by the binding of calcium/CaM and phosphorylation by CaMKK (alpha or beta). The CaMKK-CaMKIV cascade participates in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors. It also is implicated in T-cell development and signaling, cytokine secretion, and signaling through Toll-like receptors, and is thus, pivotal in immune response and inflammation. The CaMKIV subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270987 [Multi-domain]  Cd Length: 294  Bit Score: 82.95  E-value: 6.47e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPNVFQnlvscKRVFR-ELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSD 87
Cdd:cd14085    29 KPYAVKKLKKTVD-----KKIVRtEIGVLLRLSHPNIIKLKEIFETP-----TEISLVLELVTGgELFDRIVEKGYYSER 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVeeLDESRHMTQEVVTQYYRAPEILMGSR 164
Cdd:cd14085    99 DAADAVKQILEAVAYLHENGIVHRDLKPENLLYATpapDAPLKIADFGLSKI--VDQQVTMKTVCGTPGYCAPEILRGCA 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 hYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgtpsleamrtacegaKAHILRGPHKQPSlPVLYTLSSQA 244
Cdd:cd14085   177 -YGPEVDMWSVGVITYILLCGFEPFYDERGDQYM----------------------FKRILNCDYDFVS-PWWDDVSLNA 232
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 245 TheavHLLCRMLVFDPSKRISAKDALAHPYLDE 277
Cdd:cd14085   233 K----DLVKKLIVLDPKKRLTTQQALQHPWVTG 261
STKc_PAK4 cd06657
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the ...
9-275 6.73e-18

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. PAK4 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132988 [Multi-domain]  Cd Length: 292  Bit Score: 83.15  E-value: 6.73e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpnvfqNLVSCKR---VFRELKMLCFFKHDNVLSALDilqpphiDYF--EEIYVVTELMQSDLHKIIVSPQP 83
Cdd:cd06657    45 GKLVAVKKM-----DLRKQQRrelLFNEVVIMRDYQHENVVEMYN-------SYLvgDELWVVMEFLEGGALTDIVTHTR 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGL-ARVEEldESRHMTQEVVTQYYRAPEiLMG 162
Cdd:cd06657   113 MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFcAQVSK--EVPRRKSLVGTPYWMAPE-LIS 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 163 SRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLgTPSLEAMRTAcegakAHILRGphkqpslpvlytlss 242
Cdd:cd06657   190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPKLKNLHKV-----SPSLKG--------------- 248
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 243 qatheavhLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06657   249 --------FLDRLLVRDPAQRATAAELLKHPFL 273
STKc_DAPK cd14105
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs ...
25-275 7.22e-18

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. DAPK2 is also called DAPK-related protein 1 (DRP-1), while DAPK3 has also been named DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk). These proteins are ubiquitously expressed in adult tissues, are capable of cross talk with each other, and may act synergistically in regulating cell death. The DAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271007 [Multi-domain]  Cd Length: 269  Bit Score: 82.54  E-value: 7.22e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  25 VSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYL 103
Cdd:cd14105    50 VSREDIEREVSILRQVLHPNIITLHDVFENK-----TDVVLILELVAGgELFDFLAEKESLSEEEATEFLKQILDGVNYL 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 104 HSAGILHRDIKPGNLLVNSNCV----LKICDFGLA-RVEELDESRHMTQevvTQYYRAPEILmgsrHYSN---AIDIWSV 175
Cdd:cd14105   125 HTKNIAHFDLKPENIMLLDKNVpiprIKLIDFGLAhKIEDGNEFKNIFG---TPEFVAPEIV----NYEPlglEADMWSI 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 176 GCIfaellgRRILFQAQSPIQqldlitdllgtpsleamrtacegakahilrGPHKQPSLPVLYTLS--------SQATHE 247
Cdd:cd14105   198 GVI------TYILLSGASPFL------------------------------GDTKQETLANITAVNydfddeyfSNTSEL 241
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 248 AVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14105   242 AKDFIRQLLVKDPRKRMTIQESLRHPWI 269
STKc_PDK1 cd05581
Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs ...
28-274 9.78e-18

Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. It is essential for normal embryo development and is important in regulating cell volume. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270733 [Multi-domain]  Cd Length: 278  Bit Score: 82.26  E-value: 9.78e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELM-QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd05581    46 KYVTIEKEVLSRLAHPGIVKLYYTFQDE-----SKLYFVLEYApNGDLLEYIRKYGSLDEKCTRFYTAEIVLALEYLHSK 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 GILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQE----------------VVTQYYRAPEILmGSRHYSNAI 170
Cdd:cd05581   121 GIIHRDLKPENILLDEDMHIKITDFGTAKVLGPDSSPESTKGdadsqiaynqaraasfVGTAEYVSPELL-NEKPAGKSS 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 171 DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDllgtpsleamrtaCEgakahilrgphkqpslpvlYTLSSQATHEAVH 250
Cdd:cd05581   200 DLWALGCIIYQMLTGKPPFRGSNEYLTFQKIVK-------------LE-------------------YEFPENFPPDAKD 247
                         250       260       270
                  ....*....|....*....|....*....|
gi 1907080392 251 LLCRMLVFDPSKRISAKDA------LAHPY 274
Cdd:cd05581   248 LIQKLLVLDPSKRLGVNENggydelKAHPF 277
STKc_MSK1_C cd14179
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
64-300 1.01e-17

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271081 [Multi-domain]  Cd Length: 310  Bit Score: 82.78  E-value: 1.01e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  64 YVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEL 139
Cdd:cd14179    78 FLVMELLKGgELLERIKKKQHFSETEASHIMRKLVSAVSHMHDVGVVHRDLKPENLLFtdeSDNSEIKIIDFGFARLKPP 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 140 DeSRHMTQEVVTQYYRAPEILmGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldliTDLLGTPSLEAMRTACEG 219
Cdd:cd14179   158 D-NQPLKTPCFTLHYAAPELL-NYNGYDESCDLWSLGVILYTMLSGQVPFQCHD--------KSLTCTSAEEIMKKIKQG 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 220 AkahilrgphkqpslpvlYTLSSQA----THEAVHLLCRMLVFDPSKRISAKDALAHPYLDEG-RLRYHTCMCKCCFSTS 294
Cdd:cd14179   228 D-----------------FSFEGEAwknvSQEAKDLIQGLLTVDPNKRIKMSGLRYNEWLQDGsQLSSNPLMTPDILGSS 290

                  ....*.
gi 1907080392 295 TGRVYT 300
Cdd:cd14179   291 GASVHT 296
STKc_RSK4_C cd14177
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called ...
41-275 1.06e-17

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 4 (also called Ribosomal protein S6 kinase alpha-6 or 90kDa ribosomal protein S6 kinase 6); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK4 is also called S6K-alpha-6, RPS6KA6, p90RSK6 or pp90RSK4. RSK4 is a substrate of ERK and is a modulator of p53-dependent proliferation arrest in human cells. Deletion of the RSK4 gene, RPS6KA6, frequently occurs in patients of X-linked deafness type 3, mental retardation and choroideremia. Studies of RSK4 in cancer cells and tissues suggest that it may be oncogenic or tumor suppressive depending on many factors. RSK4 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271079 [Multi-domain]  Cd Length: 295  Bit Score: 82.37  E-value: 1.06e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  41 KHDNVLSALDILqpphiDYFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL 119
Cdd:cd14177    56 QHPNIITLKDVY-----DDGRYVYLVTELMKGgELLDRILRQKFFSEREASAVLYTITKTVDYLHCQGVVHRDLKPSNIL 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 120 VNSNCV----LKICDFGLARVEELDESRHMTqEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFqAQSPI 195
Cdd:cd14177   131 YMDDSAnadsIRICDFGFAKQLRGENGLLLT-PCYTANFVAPEVLM-RQGYDAACDIWSLGVLLYTMLAGYTPF-ANGPN 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 196 QqldlitdllgTPSLEAMRTaceGAKAHILRGPHKQpslpvlyTLSSQATheavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14177   208 D----------TPEEILLRI---GSGKFSLSGGNWD-------TVSDAAK----DLLSHMLHVDPHQRYTAEQVLKHSWI 263
STKc_RIP cd13978
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze ...
12-175 1.21e-17

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP kinases serve as essential sensors of cellular stress. They are involved in regulating NF-kappaB and MAPK signaling, and are implicated in mediating cellular processes such as apoptosis, necroptosis, differentiation, and survival. RIP kinases contain a homologous N-terminal kinase domain and varying C-terminal domains. Higher vertebrates contain multiple RIP kinases, with mammals harboring at least five members. RIP1 and RIP2 harbor C-terminal domains from the Death domain (DD) superfamily while RIP4 contains ankyrin (ANK) repeats. RIP3 contain a RIP homotypic interaction motif (RHIM) that facilitates binding to RIP1. RIP1 and RIP3 are important in apoptosis and necroptosis, while RIP2 and RIP4 play roles in keratinocyte differentiation and inflammatory immune responses. The RIP subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270880 [Multi-domain]  Cd Length: 263  Bit Score: 81.73  E-value: 1.21e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS----DLHKIIVSPQPLSsd 87
Cdd:cd13978    21 VAIKCLHSSPNCIEERKALLKEAEKMERARHSYVLPLLGVCVER-----RSLGLVMEYMENgslkSLLEREIQDVPWS-- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 hVKV-FLYQILRGLKYLHSA--GILHRDIKPGNLLVNSNCVLKICDFGLARVEEL----DESRHMTQEVVTQYYRAPEIL 160
Cdd:cd13978    94 -LRFrIIHEIALGMNFLHNMdpPLLHHDLKPENILLDNHFHVKISDFGLSKLGMKsisaNRRRGTENLGGTPIYMAPEAF 172
                         170       180
                  ....*....|....*....|...
gi 1907080392 161 --------MGSRHYSNAIDIWSV 175
Cdd:cd13978   173 ddfnkkptSKSDVYSFAIVIWAV 195
STKc_PAK2 cd06655
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the ...
2-275 1.26e-17

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. It belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132986 [Multi-domain]  Cd Length: 296  Bit Score: 82.46  E-value: 1.26e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPnvFQNLVSCKRVFRELKMLCFFKHDNVLSALDilqpphiDYF--EEIYVVTELMQSDLHKIIV 79
Cdd:cd06655    37 TAIDVATGQEVAIKQIN--LQKQPKKELIINEILVMKELKNPNIVNFLD-------SFLvgDELFVVMEYLAGGSLTDVV 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEI 159
Cdd:cd06655   108 TETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEV 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDlLGTPSLEamrtacegakahilrGPHKQPslPVLYT 239
Cdd:cd06655   187 VT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQ---------------NPEKLS--PIFRD 247
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1907080392 240 lssqatheavhLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06655   248 -----------FLNRCLEMDVEKRGSAKELLQHPFL 272
STKc_PhKG1 cd14182
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs ...
64-277 1.45e-17

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 1 subunit (PhKG1) is also referred to as the muscle gamma isoform. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271084 [Multi-domain]  Cd Length: 276  Bit Score: 81.89  E-value: 1.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  64 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDES 142
Cdd:cd14182    86 FLVFDLMKkGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPG 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 143 RHMTQEVVTQYYRAPEIL---MGSRH--YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITD---LLGTPSLEamr 214
Cdd:cd14182   164 EKLREVCGTPGYLAPEIIecsMDDNHpgYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSgnyQFGSPEWD--- 240
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 215 tacegakahilrgphkqpslpvlytlssQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDE 277
Cdd:cd14182   241 ----------------------------DRSDTVKDLISRFLVVQPQKRYTAEEALAHPFFQQ 275
STKc_SnRK2-3 cd14665
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
40-274 1.56e-17

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2, group 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK2 is represented in this cd. SnRK2s are involved in plant response to abiotic stresses and abscisic acid (ABA)-dependent plant development. The SnRK2s subfamily is in turn classed into three subgroups, all 3 of which are represented in this CD. Group 1 comprises kinases not activated by ABA, group 2 - kinases not activated or activated very weakly by ABA (depending on plant species), and group 3 - kinases strongly activated by ABA. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271135 [Multi-domain]  Cd Length: 257  Bit Score: 81.18  E-value: 1.56e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  40 FKHDNVLSALD-ILQPPHIDYFEEIYVVTELMQSdlhkiIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNL 118
Cdd:cd14665    53 LRHPNIVRFKEvILTPTHLAIVMEYAAGGELFER-----ICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENT 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 119 LVNSNCV--LKICDFGLARVEELDESRHMTqeVVTQYYRAPEILMGSRHYSNAIDIWSVGC-IFAELLGRRILFQAQSPI 195
Cdd:cd14665   128 LLDGSPAprLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKIADVWSCGVtLYVMLVGAYPFEDPEEPR 205
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 196 QQLDLITDLLGTpsleamrtacegakahilrgphkQPSLPVLYTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14665   206 NFRKTIQRILSV-----------------------QYSIPDYVHISP----ECRHLISRIFVADPATRITIPEIRNHEW 257
PKc_MEK cd06615
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
94-275 2.83e-17

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK1 and MEK2 are MAPK kinases (MAPKKs or MKKs), and are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132946 [Multi-domain]  Cd Length: 308  Bit Score: 81.33  E-value: 2.83e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 YQILRGLKYL---HSagILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESrhMTQEVV-TQYYRAPEILMGSrHYSNA 169
Cdd:cd06615   106 IAVLRGLTYLrekHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVgTRSYMSPERLQGT-HYTVQ 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 170 IDIWSVGCIFAELL-GR------------RILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPhkQPSLPv 236
Cdd:cd06615   179 SDIWSLGLSLVEMAiGRypipppdakeleAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEP--PPKLP- 255
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1907080392 237 lytlSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06615   256 ----SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290
STKc_MAPKAPK3 cd14172
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
55-275 3.16e-17

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 3 (MAPKAP3 or MK3) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK3 is a bonafide substrate for the MAPK p38. It is closely related to MK2 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK3 activity is only significant when MK2 is absent. The MK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271074 [Multi-domain]  Cd Length: 267  Bit Score: 80.80  E-value: 3.16e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  55 PHI----DYFEEIY-------VVTELMQS-DLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV 120
Cdd:cd14172    57 PHIvhilDVYENMHhgkrcllIIMECMEGgELFSRIQErgDQAFTEREASEIMRDIGTAIQYLHSMNIAHRDVKPENLLY 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 121 ---NSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILmGSRHYSNAIDIWSVGCIFAELLGRRILF-----QAQ 192
Cdd:cd14172   137 tskEKDAVLKLTDFGFAK--ETTVQNALQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFysntgQAI 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 193 SPiqqldlitdllgtpsleamrtaceGAKAHILRGPHKQPSlPVLytlsSQATHEAVHLLCRMLVFDPSKRISAKDALAH 272
Cdd:cd14172   214 SP------------------------GMKRRIRMGQYGFPN-PEW----AEVSEEAKQLIRHLLKTDPTERMTITQFMNH 264

                  ...
gi 1907080392 273 PYL 275
Cdd:cd14172   265 PWI 267
STKc_DCKL1 cd14183
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called ...
33-277 3.32e-17

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL1 (or DCAMKL1) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL1 contains a serine, threonine, and proline rich domain (SP) and a C-terminal kinase domain with similarity to CAMKs. DCKL1 interacts with tubulin, glucocorticoid receptor, dynein, JIP1/2, caspases (3 and 8), and calpain, among others. It plays roles in neurogenesis, neuronal migration, retrograde transport, and neuronal apoptosis. The DCKL1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271085 [Multi-domain]  Cd Length: 268  Bit Score: 80.81  E-value: 3.32e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVlsaldILQPPHIDYFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd14183    54 EVSILRRVKHPNI-----VLLIEEMDMPTELYLVMELVKGgDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHR 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLV----NSNCVLKICDFGLARVeeLDESRHMTqeVVTQYYRAPEILmGSRHYSNAIDIWSVGCIFAELlgrri 187
Cdd:cd14183   129 DIKPENLLVyehqDGSKSLKLGDFGLATV--VDGPLYTV--CGTPTYVAPEII-AETGYGLKVDIWAAGVITYIL----- 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 lfqaqspiqqldlitdLLGTPSLEAMRTACEGAKAHILRGphkQPSLPVLYTlsSQATHEAVHLLCRMLVFDPSKRISAK 267
Cdd:cd14183   199 ----------------LCGFPPFRGSGDDQEVLFDQILMG---QVDFPSPYW--DNVSDSAKELITMMLQVDVDQRYSAL 257
                         250
                  ....*....|
gi 1907080392 268 DALAHPYLDE 277
Cdd:cd14183   258 QVLEHPWVND 267
STKc_HUNK cd14070
Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase ...
28-184 3.60e-17

Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase (also called MAK-V); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HUNK/MAK-V was identified from a mammary tumor in an MMTV-neu transgenic mouse. It is required for the metastasis of c-myc-induced mammary tumors, but is not necessary for c-myc-induced primary tumor formation or normal development. It is required for HER2/neu-induced tumor formation and maintenance of the cells' tumorigenic phenotype. It is over-expressed in aggressive subsets of ovary, colon, and breast carcinomas. HUNK interacts with synaptopodin, and may also play a role in synaptic plasticity. The HUNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270972 [Multi-domain]  Cd Length: 262  Bit Score: 80.25  E-value: 3.60e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd14070    48 KNLRREGRIQQMIRHPNITQLLDILETEN-----SYYLVMELCPGgNLMHRIYDKKRLEEREARRYIRQLVSAVEHLHRA 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 GILHRDIKPGNLLVNSNCVLKICDFGLARVEeldESRHMTQEVVTQ----YYRAPEiLMGSRHYSNAIDIWSVGC-IFAE 181
Cdd:cd14070   123 GVVHRDLKIENLLLDENDNIKLIDFGLSNCA---GILGYSDPFSTQcgspAYAAPE-LLARKKYGPKVDVWSIGVnMYAM 198

                  ...
gi 1907080392 182 LLG 184
Cdd:cd14070   199 LTG 201
STKc_PAK3 cd06656
Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine ...
5-275 3.62e-17

Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation.


Pssm-ID: 132987 [Multi-domain]  Cd Length: 297  Bit Score: 80.92  E-value: 3.62e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPnvFQNLVSCKRVFRELKMLCFFKHDNVLSALDilqpphiDYF--EEIYVVTELMQSDLHKIIVSPQ 82
Cdd:cd06656    40 DIATGQEVAIKQMN--LQQQPKKELIINEILVMRENKNPNIVNYLD-------SYLvgDELWVVMEYLAGGSLTDVVTET 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMg 162
Cdd:cd06656   111 CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT- 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 163 SRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDlLGTPSLEamrtacegakahilrGPHKqpsLPVLYTlss 242
Cdd:cd06656   189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQ---------------NPER---LSAVFR--- 246
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 243 qatheavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06656   247 -------DFLNRCLEMDVDRRGSAKELLQHPFL 272
STKc_GRK cd05577
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs ...
66-274 3.78e-17

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. They contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7, which are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270729 [Multi-domain]  Cd Length: 278  Bit Score: 80.65  E-value: 3.78e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  66 VTELMQS-DLHKII--VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDES 142
Cdd:cd05577    71 VLTLMNGgDLKYHIynVGTRGFSEARAIFYAAEIICGLEHLHNRFIVYRDLKPENILLDDHGHVRISDLGLAV--EFKGG 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 143 RHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQldlitdllgtpsleamrtacegAKA 222
Cdd:cd05577   149 KKIKGRVGTHGYMAPEVLQKEVAYDFSVDWFALGCMLYEMI------AGRSPFRQ----------------------RKE 200
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 223 HILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRI-----SAKDALAHPY 274
Cdd:cd05577   201 KVDKEELKRRTLEMAVEYPDSFSPEARSLCEGLLQKDPERRLgcrggSADEVKEHPF 257
STKc_PKA cd14209
Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze ...
60-201 3.84e-17

Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271111 [Multi-domain]  Cd Length: 290  Bit Score: 80.91  E-value: 3.84e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  60 FEEIYVVTEL-----MQSDLHKIIVSPQPlssdHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA 134
Cdd:cd14209    73 NSNLYMVMEYvpggeMFSHLRRIGRFSEP----HARFYAAQIVLAFEYLHSLDLIYRDLKPENLLIDQQGYIKVTDFGFA 148
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 135 -RVeeldESRHMTQeVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 201
Cdd:cd14209   149 kRV----KGRTWTL-CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 210
STKc_Nek8 cd08220
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
84-273 4.22e-17

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Nek8 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270859 [Multi-domain]  Cd Length: 256  Bit Score: 80.16  E-value: 4.22e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN-CVLKICDFGLARVEeldESRHMTQEVV-TQYYRAPEILM 161
Cdd:cd08220    98 LSEEEILHFFVQILLALHHVHSKQILHRDLKTQNILLNKKrTVVKIGDFGISKIL---SSKSKAYTVVgTPCYISPELCE 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GsRHYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlitdllgTPSLeAMRtacegakahILRGPHKQPslpvlytlS 241
Cdd:cd08220   175 G-KPYNQKSDIWALGCVLYELASLKRAFEAAN-------------LPAL-VLK---------IMRGTFAPI--------S 222
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907080392 242 SQATHEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd08220   223 DRYSEELRHLILSMLHLDPNKRPTLSEIMAQP 254
STKc_Trio_C cd14113
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
5-275 4.78e-17

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Triple functional domain protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Triple functional domain protein (Trio), also called PTPRF-interacting protein, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. Trio plays important roles in neuronal cell migration and axon guidance. It was originally identified as an interacting partner of the of the receptor-like tyrosine phosphatase (RPTP) LAR (leukocyte-antigen-related protein), a family of receptors that function in the signaling to the actin cytoskeleton during development. Trio functions as a GEF for Rac1, RhoG, and RhoA, and is involved in the regulation of lamellipodia formation, mediating Rac1-dependent cell spreading and migration. The Trio subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271015 [Multi-domain]  Cd Length: 263  Bit Score: 80.02  E-value: 4.78e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhIDYfeeIYVVTELMQSDLHKIIVSPQPL 84
Cdd:cd14113    27 DQRGTKRAVATKFVN--KKLMKRDQVTHELGVLQSLQHPQLVGLLDTFETP-TSY---ILVLEMADQGRLLDYVVRWGNL 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd14113   101 TEEKIRFYLREILEALQYLHNCRIAHLDLKPENILVDqslSKPTIKLADFGDA--VQLNTTYYIHQLLGSPEFAAPEIIL 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSRhYSNAIDIWSVGCIfaellgRRILFQAQSPIqqLDlitdllgtpslEAMRTACegakAHILRgphKQPSLPVLYTLS 241
Cdd:cd14113   179 GNP-VSLTSDLWSIGVL------TYVLLSGVSPF--LD-----------ESVEETC----LNICR---LDFSFPDDYFKG 231
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1907080392 242 -SQATHEAVHLLCRMlvfDPSKRISAKDALAHPYL 275
Cdd:cd14113   232 vSQKAKDFVCFLLQM---DPAKRPSAALCLQEQWL 263
STKc_MSK2_N cd05614
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
57-274 5.23e-17

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270765 [Multi-domain]  Cd Length: 332  Bit Score: 81.12  E-value: 5.23e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  57 IDYFEEIYVVTELMQSDlhkiivspqPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARv 136
Cdd:cd05614    84 LDYVSGGELFTHLYQRD---------HFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSK- 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 137 EELDESRHMTQEVV-TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIqqldlitdllgtpSLEAMRT 215
Cdd:cd05614   154 EFLTEEKERTYSFCgTIEYMAPEIIRGKSGHGKAVDWWSLGILMFELL------TGASPF-------------TLEGEKN 214
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 216 ACEGAKAHILRgphKQPSLPvlytlsSQATHEAVHLLCRMLVFDPSKRI-----SAKDALAHPY 274
Cdd:cd05614   215 TQSEVSRRILK---CDPPFP------SFIGPVARDLLQKLLCKDPKKRLgagpqGAQEIKEHPF 269
STKc_Nek3 cd08219
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
16-193 5.66e-17

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173759 [Multi-domain]  Cd Length: 255  Bit Score: 79.63  E-value: 5.66e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  16 KMPNVFQNLVSCKRvfrELKMLCFFKHDNVLSaldilqppHIDYFE---EIYVVTELMQSD--LHKIIVSPQPL-SSDHV 89
Cdd:cd08219    34 RLPKSSSAVEDSRK---EAVLLAKMKHPNIVA--------FKESFEadgHLYIVMEYCDGGdlMQKIKLQRGKLfPEDTI 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  90 KVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEIlMGSRHYSNA 169
Cdd:cd08219   103 LQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY-VGTPYYVPPEI-WENMPYNNK 180
                         170       180
                  ....*....|....*....|....
gi 1907080392 170 IDIWSVGCIFAELLGRRILFQAQS 193
Cdd:cd08219   181 SDIWSLGCILYELCTLKHPFQANS 204
STKc_PAK1 cd06654
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the ...
2-275 6.34e-17

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. PAK1 belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270820 [Multi-domain]  Cd Length: 296  Bit Score: 80.15  E-value: 6.34e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   2 SVTDPRDGKRVALKKMPnvFQNLVSCKRVFRELKMLCFFKHDNVLSALDilqpphiDYF--EEIYVVTELMQSDLHKIIV 79
Cdd:cd06654    38 TAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLD-------SYLvgDELWVVMEYLAGGSLTDVV 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEI 159
Cdd:cd06654   109 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEV 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDlLGTPSLEamrtacegakahilrGPHKqpsLPVLYT 239
Cdd:cd06654   188 VT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQ---------------NPEK---LSAIFR 247
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1907080392 240 lssqatheavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06654   248 ----------DFLNRCLEMDVEKRGSAKELLQHQFL 273
PKc_CLK2 cd14215
Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2; Dual-specificity ...
7-275 6.94e-17

Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. CLK2 plays a role in hepatic insulin signaling and glucose metabolism. It is induced by the insulin/Akt pathway as part of the hepatic refeeding reponse, and it directly phosphorylates the SR domain of PGC-1alpha, which results in decreased gluconeogenic gene expression and glucose output. CLKs are involved in the phosphorylation and regulation of serine/arginine-rich (SR) proteins, which play a crucial role in pre-mRNA splicing by directing splice site selection. SR proteins are phosphorylated first by SR protein kinases (SRPKs) at the N-terminus, which leads to its assembly into nuclear speckles where splicing factors are stored. CLKs phosphorylate the C-terminal part of SR proteins, causing the nuclear speckles to dissolve and splicing factors to be recruited at sites of active transcription. Based on a conserved "EHLAMMERILG" signature motif which may be crucial for substrate specificity, CLKs are also referred to as LAMMER kinases. CLKs autophosphorylate at tyrosine residues and phosphorylate their substrates exclusively on serine/threonine residues. The CLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271117 [Multi-domain]  Cd Length: 330  Bit Score: 80.83  E-value: 6.94e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNVFQnlvsckrvFRELKMLcffkHDNVLSALDILQPPH----------IDYFEEIYVVTELMQSDLHK 76
Cdd:cd14215    36 RGGARVALKIIKNVEK--------YKEAARL----EINVLEKINEKDPENknlcvqmfdwFDYHGHMCISFELLGLSTFD 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  77 IIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL-VNS------------------NCVLKICDFGLAr 135
Cdd:cd14215   104 FLKENNylPYPIHQVRHMAFQVCQAVKFLHDNKLTHTDLKPENILfVNSdyeltynlekkrdersvkSTAIRVVDFGSA- 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 136 veELDESRHMTQeVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLG-TPSLEAMR 214
Cdd:cd14215   183 --TFDHEHHSTI-VSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGpIPSRMIRK 258
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907080392 215 TAcegAKAHILRGPH------------KQPSLPVLYTLSSQAT--HEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14215   259 TR---KQKYFYHGRLdwdentsagryvRENCKPLRRYLTSEAEehHQLFDLIESMLEYEPSKRLTLAAALKHPFF 330
STKc_TAO3 cd06633
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze ...
12-186 7.54e-17

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO3 is also known as JIK (c-Jun N-terminal kinase inhibitory kinase) or KFC (kinase from chicken). It specifically activates JNK, presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270803 [Multi-domain]  Cd Length: 313  Bit Score: 80.47  E-value: 7.54e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMP-NVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTElmQSDLhkIIVSPQPLSSDHVK 90
Cdd:cd06633    49 VAIKKMSySGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKDHTAWLVMEYCLGS--ASDL--LEVHKKPLQEVEIA 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhmtqeVVTQYYRAPEIL--MGSRHYSN 168
Cdd:cd06633   125 AITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSF-----VGTPYWMAPEVIlaMDEGQYDG 199
                         170
                  ....*....|....*...
gi 1907080392 169 AIDIWSVGCIFAELLGRR 186
Cdd:cd06633   200 KVDIWSLGITCIELAERK 217
PK_GC cd13992
Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows ...
8-186 7.65e-17

Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270894 [Multi-domain]  Cd Length: 268  Bit Score: 79.74  E-value: 7.65e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKmpnVFQNLVSCKRVFRELKMLCFFKHDNVLSALDI-LQPPhidyfeEIYVVTELMQ-SDLHKII-VSPQPL 84
Cdd:cd13992    24 GGRTVAIKH---ITFSRTEKRTILQELNQLKELVHDNLNKFIGIcINPP------NIAVVTEYCTrGSLQDVLlNREIKM 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLH-SAGILHRDIKPGNLLVNSNCVLKICDFGLA--RVEELDESRHMTQEVVTQYYRAPEIL- 160
Cdd:cd13992    95 DWMFKSSFIKDIVKGMNYLHsSSIGYHGRLKSSNCLVDSRWVVKLTDFGLRnlLEEQTNHQLDEDAQHKKLLWTAPELLr 174
                         170       180
                  ....*....|....*....|....*...
gi 1907080392 161 --MGSRHYSNAIDIWSVGCIFAELLGRR 186
Cdd:cd13992   175 gsLLEVRGTQKGDVYSFAIILYEILFRS 202
STKc_TSSK1_2-like cd14165
Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; ...
32-275 9.78e-17

Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK2 is localized in the sperm neck, equatorial segment, and mid-piece of the sperm tail. Both TSSK1 and TSSK2 phosphorylate their common substrate TSKS (testis-specific-kinase-substrate). TSSK1/TSSK2 double knock-out mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271067 [Multi-domain]  Cd Length: 263  Bit Score: 79.05  E-value: 9.78e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPHidyfEEIYVVTEL-MQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd14165    50 RELEILARLNHKSIIKTYEIFETSD----GKVYIVMELgVQGDLLEFIKLRGALPEDVARKMFHQLSSAIKYCHELDIVH 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV---TQYYRAPEILMGSRHYSNAIDIWSVGCIFaellgrRI 187
Cdd:cd14165   126 RDLKCENLLLDKDFNIKLTDFGFSKRCLRDENGRIVLSKTfcgSAAYAAPEVLQGIPYDPRIYDIWSLGVIL------YI 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 LFQAQSPIQQLDLitdllgtpsleamRTACEGAKAHILRGPHkqpslpvlytlSSQATHEAVHLLCRMLVFDPSKRISAK 267
Cdd:cd14165   200 MVCGSMPYDDSNV-------------KKMLKIQKEHRVRFPR-----------SKNLTSECKDLIYRLLQPDVSQRLCID 255

                  ....*...
gi 1907080392 268 DALAHPYL 275
Cdd:cd14165   256 EVLSHPWL 263
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
64-196 1.07e-16

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 81.38  E-value: 1.07e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  64 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDES 142
Cdd:NF033483   83 YIVMEYVDgRTLKDYIREHGPLSPEEAVEIMIQILSALEHAHRNGIVHRDIKPQNILITKDGRVKVTDFGIARA--LSST 160
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 143 RhMTQevvTQYyrapeiLMGSRHY--------------SnaiDIWSVGCIFAELLGRRILFQAQSPIQ 196
Cdd:NF033483  161 T-MTQ---TNS------VLGTVHYlspeqarggtvdarS---DIYSLGIVLYEMLTGRPPFDGDSPVS 215
STKc_SBK1 cd13987
Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the ...
3-179 1.17e-16

Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SBK1, also called BSK146, is predominantly expressed in the brain. Its expression is increased in the developing brain during the late embryonic stage, coinciding with dramatic neuronal proliferation, migration, and maturation. SBK1 may play an important role in regulating brain development. The SBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270889 [Multi-domain]  Cd Length: 259  Bit Score: 78.91  E-value: 1.17e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPnvfQNLVSCKRVFRELKMLCFFK-HDNVLSALDIlqpphidYFE--EIYVVT-ELMQS-DLHKI 77
Cdd:cd13987    12 AVHKGSGTKMALKFVP---KPSTKLKDFLREYNISLELSvHPHIIKTYDV-------AFEteDYYVFAqEYAPYgDLFSI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNC-VLKICDFGLAR-VEELDESRHMTQEvvtqyY 154
Cdd:cd13987    82 IPPQVGLPEERVKRCAAQLASALDFMHSKNLVHRDIKPENvLLFDKDCrRVKLCDFGLTRrVGSTVKRVSGTIP-----Y 156
                         170       180
                  ....*....|....*....|....*....
gi 1907080392 155 RAPEILMGSRHYSNA----IDIWSVGCIF 179
Cdd:cd13987   157 TAPEVCEAKKNEGFVvdpsIDVWAFGVLL 185
STKc_RSK3_C cd14178
C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called ...
36-275 1.18e-16

C-terminal catalytic domain of the Serine/Threonine Kinase, Ribosomal S6 kinase 3 (also called Ribosomal protein S6 kinase alpha-2 or 90kDa ribosomal protein S6 kinase 2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSK3 is also called S6K-alpha-2, RPS6KA2, p90RSK2 or MAPK-activated protein kinase 1c (MAPKAPK-1c). RSK3 binds muscle A-kinase anchoring protein (mAKAP)-b directly and regulates concentric cardiac myocyte growth. The RSK3 gene, RPS6KA2, is a putative tumor suppressor gene in sporadic epithelial ovarian cancer and variations to the gene may be associated with rectal cancer risk. RSK3 is one of four RSK isoforms (RSK1-4) from distinct genes present in vertebrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. The RSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271080 [Multi-domain]  Cd Length: 293  Bit Score: 79.67  E-value: 1.18e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  36 MLCFFKHDNVLSALDILqpphiDYFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIK 114
Cdd:cd14178    50 LLRYGQHPNIITLKDVY-----DDGKFVYLVMELMRGgELLDRILRQKCFSEREASAVLCTITKTVEYLHSQGVVHRDLK 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 115 PGNLLVNSNC----VLKICDFGLARVEELDESRHMTqEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFq 190
Cdd:cd14178   125 PSNILYMDESgnpeSIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLK-RQGYDAACDIWSLGILLYTMLAGFTPF- 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 191 AQSPIQqldlitdllgTPSLEAMRTaceGAKAHILRGPHkqpslpvlYTLSSQATHEAVhllCRMLVFDPSKRISAKDAL 270
Cdd:cd14178   202 ANGPDD----------TPEEILARI---GSGKYALSGGN--------WDSISDAAKDIV---SKMLHVDPHQRLTAPQVL 257

                  ....*
gi 1907080392 271 AHPYL 275
Cdd:cd14178   258 RHPWI 262
PTZ00284 PTZ00284
protein kinase; Provisional
78-275 1.23e-16

protein kinase; Provisional


Pssm-ID: 140307 [Multi-domain]  Cd Length: 467  Bit Score: 81.16  E-value: 1.23e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSN----------------CVLKICDFGLArveeLD 140
Cdd:PTZ00284  222 IMKHGPFSHRHLAQIIFQTGVALDYFHTElHLMHTDLKPENILMETSdtvvdpvtnralppdpCRVRICDLGGC----CD 297
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 141 ESRHMTQEVVTQYYRAPEILMG-SRHYSNaiDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGT-PSLEAMRTACE 218
Cdd:PTZ00284  298 ERHSRTAIVSTRHYRSPEVVLGlGWMYST--DMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRlPSEWAGRCGTE 375
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907080392 219 GAK-----AHILRgPHKQPSlpvlyTLSSQATHEAVH------LLCR----MLVFDPSKRISAKDALAHPYL 275
Cdd:PTZ00284  376 EARllynsAGQLR-PCTDPK-----HLARIARARPVRevirddLLCDliygLLHYDRQKRLNARQMTTHPYV 441
STKc_Mnk cd14090
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase ...
29-274 1.24e-16

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase signal-integrating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270992 [Multi-domain]  Cd Length: 289  Bit Score: 79.38  E-value: 1.24e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKML--CFfKHDNVLSAldilqpphIDYFEE---IYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKY 102
Cdd:cd14090    45 RVFREVETLhqCQ-GHPNILQL--------IEYFEDderFYLVFEKMRGgPLLSHIEKRVHFTEQEASLVVRDIASALDF 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAGILHRDIKPGNLL---VNSNCVLKICDFGLA---RVEELDESRHMTQEVVTQY----YRAPEIL---MGSRH-YSN 168
Cdd:cd14090   116 LHDKGIAHRDLKPENILcesMDKVSPVKICDFDLGsgiKLSSTSMTPVTTPELLTPVgsaeYMAPEVVdafVGEALsYDK 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 169 AIDIWSVGCIFAELLGRRILFQAQSpiqqldliTDLLGTPSLEAMRTACEGAKAHILRG----PHKQpslpvlytlSSQA 244
Cdd:cd14090   196 RCDLWSLGVILYIMLCGYPPFYGRC--------GEDCGWDRGEACQDCQELLFHSIQEGeyefPEKE---------WSHI 258
                         250       260       270
                  ....*....|....*....|....*....|
gi 1907080392 245 THEAVHLLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd14090   259 SAEAKDLISHLLVRDASQRYTAEQVLQHPW 288
PTKc_FGFR cd05053
Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs ...
78-183 1.29e-16

Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. The FGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 270646 [Multi-domain]  Cd Length: 294  Bit Score: 79.38  E-value: 1.29e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRA 156
Cdd:cd05053   124 RVPEEQLTQKDLVSFAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARdIHHIDYYRKTTNGRLPVKWMA 203
                          90       100
                  ....*....|....*....|....*..
gi 1907080392 157 PEILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05053   204 PEALF-DRVYTHQSDVWSFGVLLWEIF 229
PTKc_Srm_Brk cd05148
Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal ...
61-202 1.45e-16

Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and Breast tumor kinase (Brk); PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk (also called protein tyrosine kinase 6) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Brk has been found to be overexpressed in a majority of breast tumors. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. The Srm/Brk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133248 [Multi-domain]  Cd Length: 261  Bit Score: 78.63  E-value: 1.45e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELM-QSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVe 137
Cdd:cd05148    75 EPVYIITELMeKGSLLAFLRSPegQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARL- 153
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 138 eLDESRHMTQEVVTQY-YRAPEILmGSRHYSNAIDIWSVGCIFAELLGR-RILFQAQSPIQQLDLIT 202
Cdd:cd05148   154 -IKEDVYLSSDKKIPYkWTAPEAA-SHGTFSTKSDVWSFGILLYEMFTYgQVPYPGMNNHEVYDQIT 218
STKc_Kin4 cd14076
Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the ...
7-275 1.46e-16

Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kin4 is a central component of the spindle position checkpoint (SPOC), which monitors spindle position and regulates the mitotic exit network (MEN). Kin4 associates with spindle pole bodies in mother cells to inhibit MEN signaling and delay mitosis until the anaphase nucleus is properly positioned along the mother-bud axis. Kin4 activity is regulated by both the bud neck-associated kinase Elm1 and protein phosphatase 2A. The Kin4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270978 [Multi-domain]  Cd Length: 270  Bit Score: 78.68  E-value: 1.46e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKM-PNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPL 84
Cdd:cd14076    29 RSGVQVAIKLIrRDTQQENCQTSKIMREINILKGLTHPNIVRLLDVLKTKK-----YIGIVLEFVSGgELFDYILARRRL 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSR 164
Cdd:cd14076   104 KDSVACRLFAQLISGVAYLHKKGVVHRDLKLENLLLDKNRNLVITDFGFANTFDHFNGDLMSTSCGSPCYAAPELVVSDS 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 HYS-NAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLgtpsleamrtacegakAHILRGPHKQPSLpvlytlssq 243
Cdd:cd14076   184 MYAgRKADIWSCGVILYAMLAGYLPFDDDPHNPNGDNVPRLY----------------RYICNTPLIFPEY--------- 238
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1907080392 244 ATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14076   239 VTPKARDLLRRILVPNPRKRIRLSAIMRHAWL 270
STKc_TSSK3-like cd14163
Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs ...
32-189 1.81e-16

Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. Its mRNA levels is low at birth, increases at puberty, and remains high throughout adulthood. The TSSK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271065 [Multi-domain]  Cd Length: 257  Bit Score: 78.49  E-value: 1.81e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPHidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd14163    49 RELQIVERLDHKNIIHVYEMLESAD----GKIYLVMELAEDgDVFDCVLHGGPLPEHRAKALFRQLVEAIRYCHGCGVAH 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNcVLKICDFGLARVEELDeSRHMTQEVV-TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILF 189
Cdd:cd14163   125 RDLKCENALLQGF-TLKLTDFGFAKQLPKG-GRELSQTFCgSTAYAAPEVLQGVPHDSRKGDIWSMGVVLYVMLCAQLPF 202
PHA03210 PHA03210
serine/threonine kinase US3; Provisional
33-273 2.15e-16

serine/threonine kinase US3; Provisional


Pssm-ID: 165476 [Multi-domain]  Cd Length: 501  Bit Score: 80.51  E-value: 2.15e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDILQPPhiDYfeeIYVVTELMQSDLHKIIV------SPQPLSSdHVKVFLYQILRGLKYLHSA 106
Cdd:PHA03210  213 EILALGRLNHENILKIEEILRSE--AN---TYMITQKYDFDLYSFMYdeafdwKDRPLLK-QTRAIMKQLLCAVEYIHDK 286
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 GILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELLGRR 186
Cdd:PHA03210  287 KLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD-GYCEITDIWSCGLILLDMLSHD 365
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 187 IL---FQAQSPIQQLDLITDLLGTPSLEAMRTACEGAK----AHILRGPHKQPSLpvLYTLSSQATHEavHLLCRMLVFD 259
Cdd:PHA03210  366 FCpigDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDyidsAEIDHAGHSVPPL--IRNLGLPADFE--YPLVKMLTFD 441
                         250
                  ....*....|....
gi 1907080392 260 PSKRISAKDALAHP 273
Cdd:PHA03210  442 WHLRPGAAELLALP 455
STKc_ACVR2 cd14053
Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the ...
12-214 2.28e-16

Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as ACVR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. Vertebrates contain two ACVR2 proteins, ACVR2a (or ActRIIA) and ACVR2b (or ActRIIB). The ACVR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270955 [Multi-domain]  Cd Length: 290  Bit Score: 78.52  E-value: 2.28e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNV-FQNLVSCKRVFRELKMlcffKHDNVLSALDILQPpHIDYFEEIYVVTELMQ---------------SDLH 75
Cdd:cd14053    21 VAVKIFPLQeKQSWLTEREIYSLPGM----KHENILQFIGAEKH-GESLEAEYWLITEFHErgslcdylkgnviswNELC 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KIIVSpqplssdhvkvflyqILRGLKYLHS----------AGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHM 145
Cdd:cd14053    96 KIAES---------------MARGLAYLHEdipatngghkPSIAHRDFKSKNVLLKSDLTACIADFGLALKFEPGKSCGD 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 146 TQ-EVVTQYYRAPEILMGSRHYSN----AIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 214
Cdd:cd14053   161 THgQVGTRRYMAPEVLEGAINFTRdaflRIDMYAMGLVLWELLSRCSVHDGPVDEYQLPFEEEVGQHPTLEDMQ 234
STKc_WNK cd13983
Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze ...
28-176 2.75e-16

Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNKs comprise a subfamily of STKs with an unusual placement of a catalytic lysine relative to all other protein kinases. They are critical in regulating ion balance and are thus, important components in the control of blood pressure. They are also involved in cell signaling, survival, proliferation, and organ development. WNKs are activated by hyperosmotic or low-chloride hypotonic stress and they function upstream of SPAK and OSR1 kinases, which regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. There are four vertebrate WNKs which show varying expression patterns. WNK1 and WNK2 are widely expressed while WNK3 and WNK4 show a more restricted expression pattern. Because mutations in human WNK1 and WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension (due to increased sodium reabsorption) and hyperkalemia (due to impaired renal potassium secretion), there are more studies conducted on these two proteins, compared to WNK2 and WNK3. The WNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270885 [Multi-domain]  Cd Length: 258  Bit Score: 77.65  E-value: 2.75e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSaldilqppHIDYFE-----EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLK 101
Cdd:cd13983    45 QRFKQEIEILKSLKHPNIIK--------FYDSWEskskkEVIFITELMTSgTLKQYLKRFKRLKLKVIKSWCRQILEGLN 116
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 102 YLHSAG--ILHRDIKPGNLLVNSNC-VLKICDFGLArvEELDESRhmTQEVV-TQYYRAPEilMGSRHYSNAIDIWSVG 176
Cdd:cd13983   117 YLHTRDppIIHRDLKCDNIFINGNTgEVKIGDLGLA--TLLRQSF--AKSVIgTPEFMAPE--MYEEHYDEKVDIYAFG 189
STKc_p70S6K cd05584
Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs ...
87-274 3.28e-16

Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270736 [Multi-domain]  Cd Length: 323  Bit Score: 78.60  E-value: 3.28e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESrHMTQEVV-TQYYRAPEILMGSRH 165
Cdd:cd05584   100 DTACFYLAEITLALGHLHSLGIIYRDLKPENILLDAQGHVKLTDFGLCK-ESIHDG-TVTHTFCgTIEYMAPEILTRSGH 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 ySNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLitdllgtpsleamrtacegakahILRGPHKQPslPVLytlssqaT 245
Cdd:cd05584   178 -GKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK-----------------------ILKGKLNLP--PYL-------T 224
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907080392 246 HEAVHLLCRMLVFDPSKRI-----SAKDALAHPY 274
Cdd:cd05584   225 NEARDLLKKLLKRNVSSRLgsgpgDAEEIKAHPF 258
STKc_Aurora-A cd14116
Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer ...
32-275 5.44e-16

Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2, which also localizes the kinase to spindle microtubules. Aurora-A is overexpressed in many cancer types such as prostate, ovarian, breast, bladder, gastric, and pancreatic. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271018 [Multi-domain]  Cd Length: 258  Bit Score: 76.92  E-value: 5.44e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDilqpphidYFEE---IYVVTELM-QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14116    54 REVEIQSHLRHPNILRLYG--------YFHDatrVYLILEYApLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQeVVTQYYRAPEILMGSRHySNAIDIWSVGCIFAELlgrri 187
Cdd:cd14116   126 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTL-CGTLDYLPPEMIEGRMH-DEKVDLWSLGVLCYEF----- 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 lfqaqspiqqldlitdLLGTPSLEAmRTACEGAKAhILRgphkqpslpVLYTLSSQATHEAVHLLCRMLVFDPSKRISAK 267
Cdd:cd14116   197 ----------------LVGKPPFEA-NTYQETYKR-ISR---------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 249

                  ....*...
gi 1907080392 268 DALAHPYL 275
Cdd:cd14116   250 EVLEHPWI 257
STKc_MAPKAPK2 cd14170
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
82-277 5.54e-16

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 2 (MAPKAP2 or MK2) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK2 is a bonafide substrate for the MAPK p38. It is closely related to MK3 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. The MK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271072 [Multi-domain]  Cd Length: 303  Bit Score: 77.77  E-value: 5.54e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARveELDESRHMTQEVVTQYYRAPE 158
Cdd:cd14170    96 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSkrpNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPE 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILmGSRHYSNAIDIWSVGCIFAELlgrrilfqaqspiqqldlitdLLGTPSLEAMR--TACEGAKAHILRGPHKQPSlpv 236
Cdd:cd14170   174 VL-GPEKYDKSCDMWSLGVIMYIL---------------------LCGYPPFYSNHglAISPGMKTRIRMGQYEFPN--- 228
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 237 lyTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDE 277
Cdd:cd14170   229 --PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 267
STKc_PKB cd05571
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer ...
85-274 6.71e-16

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of phosphoinositide 3-kinase (PI3K) and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270723 [Multi-domain]  Cd Length: 322  Bit Score: 77.78  E-value: 6.71e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMGSr 164
Cdd:cd05571    93 SEDRTRFYGAEIVLALGYLHSQGIVYRDLKLENLLLDKDGHIKITDFGLCK-EEISYGATTKTFCGTPEYLAPEVLEDN- 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 HYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLitdllgtpsleamrtacegakahILRGPHKQPSlpvlyTLSsqa 244
Cdd:cd05571   171 DYGRAVDWWGLGVVMYEMMCGRLPFYNRDHEVLFEL-----------------------ILMEEVRFPS-----TLS--- 219
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1907080392 245 tHEAVHLLCRMLVFDPSKRI-----SAKDALAHPY 274
Cdd:cd05571   220 -PEAKSLLAGLLKKDPKKRLgggprDAKEIMEHPF 253
PTKc_Jak_rpt2 cd05038
Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily ...
9-210 7.27e-16

Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. They are PTKs, catalyzing the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jaks are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. The Jak subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270634 [Multi-domain]  Cd Length: 284  Bit Score: 77.04  E-value: 7.27e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKkMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyFEEIYVVTELMQSDLHKIIVSPQPLSSDH 88
Cdd:cd05038    33 GEQVAVK-SLQPSGEEQHMSDFKREIEILRTLDHEYIVKYKGVCESPG---RRSLRLIMEYLPSGSLRDYLQRHRDQIDL 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLY--QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQ---EVVTQYYrAPEILMGS 163
Cdd:cd05038   109 KRLLLFasQICKGMEYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKEYYYVKepgESPIFWY-APECLRES 187
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 164 RHYSnAIDIWSVGCIFAELLGR------------RILFQAQSPIQQLDLITDLLGTPSL 210
Cdd:cd05038   188 RFSS-ASDVWSFGVTLYELFTYgdpsqsppalflRMIGIAQGQMIVTRLLELLKSGERL 245
PKc_MKK5 cd06619
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
96-275 8.44e-16

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 5; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK5 (also called MEK5) is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132950 [Multi-domain]  Cd Length: 279  Bit Score: 76.84  E-value: 8.44e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQeVVTQYYRAPEILMGSRhYSNAIDIWSV 175
Cdd:cd06619   104 VVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVST--QLVNSIAKTY-VGTNAYMAPERISGEQ-YGIHSDVWSL 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 176 GCIFAEL-LGRRILFQAQS------PIQQLDLITDllgtpsleamrtacegakahilrgpHKQPSLPVlytlsSQATHEA 248
Cdd:cd06619   180 GISFMELaLGRFPYPQIQKnqgslmPLQLLQCIVD-------------------------EDPPVLPV-----GQFSEKF 229
                         170       180
                  ....*....|....*....|....*..
gi 1907080392 249 VHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06619   230 VHFITQCMRKQPKERPAPENLMDHPFI 256
PK_Unc-89_rpt1 cd14109
Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein ...
30-275 9.01e-16

Pseudokinase domain, first repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein 89; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. The nematode Unc-89 gene, through alternative promoter use and splicing, encodes at least six major isoforms (Unc-89A to Unc-89F) of giant muscle proteins that are homologs for the vetebrate obscurin. In flies, five isoforms of Unc-89 have been detected: four in the muscles of adult flies (two in the indirect flight muscle and two in other muscles) and another isoform in the larva. Unc-89 in nematodes is required for normal muscle cell architecture. In flies, it is necessary for the development of a symmetrical sarcomere in the flight muscles. Unc-89 proteins contain several adhesion and signaling domains including multiple copies of the immunoglobulin (Ig) domain, as well as fibronectin type III (FN3), SH3, RhoGEF, and PH domains. The nematode Unc-89 isoforms D, C, D, and F contain two kinase domain with B and F having two complete kinase domains while the first repeat of C and D are partial domains. Homology modeling suggests that the first kinase repeat of Unc-89 may be catalytically inactive, a pseudokinase, while the second kinase repeat may be active. The pseudokinase domain may function as a regulatory domain or a protein interaction domain. The Unc-89 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271011 [Multi-domain]  Cd Length: 255  Bit Score: 76.40  E-value: 9.01e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALDIL--QPPHIDYFEEIYVVTELMQSDLHKiivSPQPLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14109    43 LMREVDIHNSLDHPNIVQMHDAYddEKLAVTVIDNLASTIELVRDNLLP---GKDYYTERQVAVFVRQLLLALKHMHDLG 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLVNSNcVLKICDFGLARveeldesRHMTQEVVTQYYRAPEI----LMGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd14109   120 IAHLDLRPEDILLQDD-KLKLADFGQSR-------RLLRGKLTTLIYGSPEFvspeIVNSYPVTLATDMWSVGVLTYVLL 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 184 GRrilfqaqspiqqldlITDLLGTPSLEAMRTACEGakahilrgphkQPSLPVlyTLSSQATHEAVHLLCRMLVFDPSKR 263
Cdd:cd14109   192 GG---------------ISPFLGDNDRETLTNVRSG-----------KWSFDS--SPLGNISDDARDFIKKLLVYIPESR 243
                         250
                  ....*....|..
gi 1907080392 264 ISAKDALAHPYL 275
Cdd:cd14109   244 LTVDEALNHPWF 255
STKc_MAST cd05609
Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine ...
10-183 9.14e-16

Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also called syntrophin-associated STK (SAST) while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270760 [Multi-domain]  Cd Length: 280  Bit Score: 76.68  E-value: 9.14e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  10 KRVALKKMPNvfQNLV---SCKRVFRELKMLCFFKHDNVLSALDilqpphidYFE---EIYVVTELMQS-DLHKIIVSPQ 82
Cdd:cd05609    26 QRFAMKKINK--QNLIlrnQIQQVFVERDILTFAENPFVVSMYC--------SFEtkrHLCMVMEYVEGgDCATLLKNIG 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV-------------EELDESRHMTQEV 149
Cdd:cd05609    96 PLPVDMARMYFAETVLALEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIglmslttnlyeghIEKDTREFLDKQV 175
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1907080392 150 V-TQYYRAPEILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05609   176 CgTPEYIAPEVIL-RQGYGKPVDWWAMGIILYEFL 209
PHA03209 PHA03209
serine/threonine kinase US3; Provisional
33-273 1.19e-15

serine/threonine kinase US3; Provisional


Pssm-ID: 177557 [Multi-domain]  Cd Length: 357  Bit Score: 77.22  E-value: 1.19e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDILQpphidYFEEIYVVTELMQSDLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:PHA03209  107 EAMLLQNVNHPSVIRMKDTLV-----SGAITCMVLPHYSSDLYTYLTkRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 112 DIKPGNLLVNSNCVLKICDFGLAR---VEELDESRHMTQEVvtqyyRAPEILMGSRhYSNAIDIWSVGCIFAELLGR-RI 187
Cdd:PHA03209  182 DVKTENIFINDVDQVCIGDLGAAQfpvVAPAFLGLAGTVET-----NAPEVLARDK-YNSKADIWSAGIVLFEMLAYpST 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 LFQAQ----------SPIQQLDLITDLL-------GTPSLEAMRTACEGAKAHilRGPHKQpsLPVLYTLSSQATHEavH 250
Cdd:PHA03209  256 IFEDPpstpeeyvksCHSHLLKIISTLKvhpeefpRDPGSRLVRGFIEYASLE--RQPYTR--YPCFQRVNLPIDGE--F 329
                         250       260
                  ....*....|....*....|...
gi 1907080392 251 LLCRMLVFDPSKRISAKDALAHP 273
Cdd:PHA03209  330 LVHKMLTFDAAMRPSAEEILNYP 352
STKc_16 cd13986
Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the ...
3-179 1.27e-15

Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK16 is associated with many names including Myristylated and Palmitylated Serine/threonine Kinase 1 (MPSK1), Kinase related to cerevisiae and thaliana (Krct), and Protein Kinase expressed in day 12 fetal liver (PKL12). It is widely expressed in mammals with highest levels found in liver, testis, and kidney. It is localized in the Golgi but is translocated to the nucleus upon disorganization of the Golgi. STK16 is constitutively active and is capable of phosphorylating itself and other substrates. It may be involved in regulating stromal-epithelial interactions during mammary gland ductal morphogenesis. It may also function as a transcriptional co-activator of type-C natriuretic peptide and VEGF. The STK16 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270888 [Multi-domain]  Cd Length: 282  Bit Score: 76.18  E-value: 1.27e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVFQNLVscKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVV-----TELMQSDLHKI 77
Cdd:cd13986    19 VEDLSTGRLYALKKILCHSKEDV--KEAMREIENYRLFNHPNILRLLDSQIVKEAGGKKEVYLLlpyykRGSLQDEIERR 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEELD-ESRH---MTQEVV 150
Cdd:cd13986    97 LVKGTFFPEDRILHIFLGICRGLKAMHEPelvPYAHRDIKPGNVLLSEDDEPILMDLGSMNPARIEiEGRRealALQDWA 176
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1907080392 151 TQY----YRAPEILMGSrhySNAI-----DIWSVGCIF 179
Cdd:cd13986   177 AEHctmpYRAPELFDVK---SHCTidektDIWSLGCTL 211
STKc_Nek10 cd08528
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
90-182 1.28e-15

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Nek10 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270867 [Multi-domain]  Cd Length: 270  Bit Score: 76.00  E-value: 1.28e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  90 KVFLyQILRGLKYLH-SAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMgSRHYSN 168
Cdd:cd08528   117 NIFV-QMVLALRYLHkEKQIVHRDLKPNNIMLGEDDKVTITDFGLAK-QKGPESSKMTSVVGTILYSCPEIVQ-NEPYGE 193
                          90
                  ....*....|....
gi 1907080392 169 AIDIWSVGCIFAEL 182
Cdd:cd08528   194 KADIWALGCILYQM 207
STKc_SRPK1 cd14216
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 1; STKs ...
63-275 1.33e-15

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPK1 binds with high affinity the alternative splicing factor, SRSF1 (serine/arginine-rich splicing factor 1), and regiospecifically phosphorylates 10-12 serines in its RS domain. It plays a role in the regulation of pre-mRNA splicing, chromatin structure, and germ cell development. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271118 [Multi-domain]  Cd Length: 349  Bit Score: 76.99  E-value: 1.33e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNCV-------------- 125
Cdd:cd14216    93 ICMVFEVLGHHLLKWIIKSnyQGLPLPCVKKIIRQVLQGLDYLHTkCRIIHTDIKPENILLSVNEQyirrlaaeatewqr 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 126 ----------------LKICDFGLARVEEldesRHMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELLGRRILF 189
Cdd:cd14216   173 nflvnplepknaeklkVKIADLGNACWVH----KHFTEDIQTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGDYLF 247
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 190 QAQSPIQ------QLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPS-------LPVL---YTLSSQATHEAVHLLC 253
Cdd:cd14216   248 EPHSGEDysrdedHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITklkpwglFEVLvekYEWSQEEAAGFTDFLL 327
                         250       260
                  ....*....|....*....|..
gi 1907080392 254 RMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14216   328 PMLELIPEKRATAAECLRHPWL 349
STKc_TAO1 cd06635
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze ...
5-186 1.43e-15

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. TAO proteins possess MAPK kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270805 [Multi-domain]  Cd Length: 317  Bit Score: 76.63  E-value: 1.43e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMP-NVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTElmQSDLhkIIVSPQP 83
Cdd:cd06635    46 DVRTSEVVAIKKMSySGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLGS--ASDL--LEVHKKP 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhmtqeVVTQYYRAPEIL--M 161
Cdd:cd06635   122 LQEIEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSF-----VGTPYWMAPEVIlaM 196
                         170       180
                  ....*....|....*....|....*
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRR 186
Cdd:cd06635   197 DEGQYDGKVDVWSLGITCIELAERK 221
STKc_MLK2 cd14148
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the ...
25-183 1.64e-15

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK2 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K10. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK2 is abundant in brain, skeletal muscle, and testis. It functions upstream of the MAPK, c-Jun N-terminal kinase. It binds hippocalcin, a calcium-sensor protein that protects neurons against calcium-induced cell death. Both MLK2 and hippocalcin may be associated with the pathogenesis of Parkinson's disease. MLK2 also binds to normal huntingtin (Htt), which is important in neuronal transcription, development, and survival. MLK2 does not bind to the polyglutamine-expanded Htt, which is implicated in the pathogeneis of Huntington's disease, leading to neuronal toxicity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271050 [Multi-domain]  Cd Length: 258  Bit Score: 75.41  E-value: 1.64e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  25 VSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIDYFEEiYVVTELMQSDLHKIIVSPqplssdHVKV-FLYQILRGLKY 102
Cdd:cd14148    35 VTAENVRQEARLFWMLQHPNIIALRGVcLNPPHLCLVME-YARGGALNRALAGKKVPP------HVLVnWAVQIARGMNY 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAG---ILHRDIKPGNLLVN--------SNCVLKICDFGLARveELDESRHMTQeVVTQYYRAPEILMGSRhYSNAID 171
Cdd:cd14148   108 LHNEAivpIIHRDLKSSNILILepienddlSGKTLKITDFGLAR--EWHKTTKMSA-AGTYAWMAPEVIRLSL-FSKSSD 183
                         170
                  ....*....|..
gi 1907080392 172 IWSVGCIFAELL 183
Cdd:cd14148   184 VWSFGVLLWELL 195
STKc_CaMKI_delta cd14168
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
33-183 1.74e-15

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271070 [Multi-domain]  Cd Length: 301  Bit Score: 76.24  E-value: 1.74e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHR 111
Cdd:cd14168    58 EIAVLRKIKHENIVALEDIYESP-----NHLYLVMQLVSGgELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHR 132
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907080392 112 DIKPGNLLV---NSNCVLKICDFGLARVEELDESrhMTQEVVTQYYRAPEILmGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd14168   133 DLKPENLLYfsqDEESKIMISDFGLSKMEGKGDV--MSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILL 204
STKc_NUAK cd14073
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze ...
9-275 1.86e-15

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK1, also called ARK5 (AMPK-related protein kinase 5), regulates cell proliferation and displays tumor suppression through direct interaction and phosphorylation of p53. It is also involved in cell senescence and motility. High NUAK1 expression is associated with invasiveness of nonsmall cell lung cancer (NSCLC) and breast cancer cells. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. The NUAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270975 [Multi-domain]  Cd Length: 254  Bit Score: 75.50  E-value: 1.86e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMP-NVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELM-QSDLHKIIVSPQPLSS 86
Cdd:cd14073    26 GREVAIKSIKkDKIEDEQDMVRIRREIEIMSSLNHPHIIRIYEVFENK-----DKIVIVMEYAsGGELYDYISERRRLPE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQEVVTQYYRAPEILMGSRHY 166
Cdd:cd14073   101 REARRIFRQIVSAVHYCHKNGVVHRDLKLENILLDQNGNAKIADFGLSNL--YSKDKLLQTFCGSPLYASPEIVNGTPYQ 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SNAIDIWSVGCIFAELLGRRILFQA---QSPIQQldlitdllgtpsleamrtacegakahILRGPHKQPSLPvlytlssq 243
Cdd:cd14073   179 GPEVDCWSLGVLLYTLVYGTMPFDGsdfKRLVKQ--------------------------ISSGDYREPTQP-------- 224
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1907080392 244 atHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14073   225 --SDASGLIRWMLTVNPKRRATIEDIANHWWV 254
STKc_ROCK_NDR_like cd05573
Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear ...
61-274 1.87e-15

Catalytic domain of Rho-associated coiled-coil containing protein kinase (ROCK)- and Nuclear Dbf2-Related (NDR)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. The ROCK/NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270725 [Multi-domain]  Cd Length: 350  Bit Score: 76.55  E-value: 1.87e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA----- 134
Cdd:cd05573    74 DHLYLVMEYMPGgDLMNLLIKYDVFPEETARFYIAELVLALDSLHKLGFIHRDIKPDNILLDADGHIKLADFGLCtkmnk 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 135 ----------------------RVEELDESRHMTQEVV-TQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQA 191
Cdd:cd05573   154 sgdresylndsvntlfqdnvlaRRRPHKQRRVRAYSAVgTPDYIAPEVLRGTG-YGPECDWWSLGVILYEMLYGFPPFYS 232
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 192 QSPIQQLDLITDLlgtpsleamrtacegaKAHiLRGPHKQPslpvlytlssqATHEAVHLLCRMLVfDPSKRI-SAKDAL 270
Cdd:cd05573   233 DSLVETYSKIMNW----------------KES-LVFPDDPD-----------VSPEAIDLIRRLLC-DPEDRLgSAEEIK 283

                  ....
gi 1907080392 271 AHPY 274
Cdd:cd05573   284 AHPF 287
STKc_MLK cd14061
Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the ...
25-183 2.29e-15

Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Mammals have four MLKs (MLK1-4), mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270963 [Multi-domain]  Cd Length: 258  Bit Score: 75.12  E-value: 2.29e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  25 VSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIDYFEEIYVVTELMQSdLHKIIVSPqplssdHVKV-FLYQILRGLKY 102
Cdd:cd14061    35 VTLENVRQEARLFWMLRHPNIIALRGVcLQPPNLCLVMEYARGGALNRV-LAGRKIPP------HVLVdWAIQIARGMNY 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAG---ILHRDIKPGNLLVN--------SNCVLKICDFGLARveELDESRHMTQeVVTQYYRAPEILMGSRhYSNAID 171
Cdd:cd14061   108 LHNEApvpIIHRDLKSSNILILeaienedlENKTLKITDFGLAR--EWHKTTRMSA-AGTYAWMAPEVIKSST-FSKASD 183
                         170
                  ....*....|..
gi 1907080392 172 IWSVGCIFAELL 183
Cdd:cd14061   184 VWSYGVLLWELL 195
STKc_MSK2_C cd14180
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
42-296 2.42e-15

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271082 [Multi-domain]  Cd Length: 309  Bit Score: 76.06  E-value: 2.42e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  42 HDNVLSALDILqppHIDYfeEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV 120
Cdd:cd14180    60 HPNIVALHEVL---HDQY--HTYLVMELLRGgELLDRIKKKARFSESEASQLMRSLVSAVSFMHEAGVVHRDLKPENILY 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 121 NS---NCVLKICDFGLARVEElDESRHMTQEVVTQYYRAPEiLMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQ 197
Cdd:cd14180   135 ADesdGAVLKVIDFGFARLRP-QGSRPLQTPCFTLQYAAPE-LFSNQGYDESCDLWSLGVILYTMLSGQVPFQSKRGKMF 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 198 LDLITDLlgtpsleaMRTACEGAkahilrgphkqpslpvlYTLSSQA----THEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd14180   213 HNHAADI--------MHKIKEGD-----------------FSLEGEAwkgvSEEAKDLVRGLLTVDPAKRLKLSELRESD 267
                         250       260
                  ....*....|....*....|...
gi 1907080392 274 YLDEGRLRYHTCMCKCCFSTSTG 296
Cdd:cd14180   268 WLQGGSALSSTPLMTPDVLESSG 290
STKc_MLTK cd14060
Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated ...
9-242 2.83e-15

Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated protein Triple Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLTK, also called zipper sterile-alpha-motif kinase (ZAK), contains a catalytic kinase domain and a leucine zipper. There are two alternatively-spliced variants, MLTK-alpha and MLTK-beta. MLTK-alpha contains a sterile-alpha-motif (SAM) at the C-terminus. MLTK regulates the c-Jun N-terminal kinase, extracellular signal-regulated kinase, p38 MAPK, and NF-kB pathways. ZAK is the MAP3K involved in the signaling cascade that leads to the ribotoxic stress response initiated by cellular damage due to Shiga toxins and ricin. It may also play a role in cell transformation and cancer development. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.The MLTK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270962 [Multi-domain]  Cd Length: 242  Bit Score: 74.61  E-value: 2.83e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpnvfqnlvscKRVFRELKMLCFFKHDNVLSALD-ILQPPHIDyfeeiyVVTELMQ-SDLHKIIVS--PQPL 84
Cdd:cd14060    18 DKEVAVKKL----------LKIEKEAEILSVLSHRNIIQFYGaILEAPNYG------IVTEYASyGSLFDYLNSneSEEM 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMTQeVVTQYYRAPEILM 161
Cdd:cd14060    82 DMDQIMTWATDIAKGMHYLHMEApvkVIHRDLKSRNVVIAADGVLKICDFGASRF--HSHTTHMSL-VGTFPWMAPEVIQ 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 gSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEamrTACEGAKAHILR-----GPHKQPSL-P 235
Cdd:cd14060   159 -SLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERPTIP---SSCPRSFAELMRrcweaDVKERPSFkQ 234

                  ....*..
gi 1907080392 236 VLYTLSS 242
Cdd:cd14060   235 IIGILES 241
STKc_NAK_like cd14037
Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases; STKs catalyze ...
3-183 2.99e-15

Catalytic domain of Numb-Associated Kinase (NAK)-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Drosophila melanogaster NAK, human BMP-2-inducible protein kinase (BMP2K or BIKe) and similar vertebrate proteins, as well as the Saccharomyces cerevisiae proteins Prk1, Actin-regulating kinase 1 (Ark1), and Akl1. NAK was the first characterized member of this subfamily. It plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. BMP2K contains a nuclear localization signal and a kinase domain that is capable of phosphorylating itself and myelin basic protein. The expression of the BMP2K gene is increase during BMP-2-induced osteoblast differentiation. It may function to control the rate of differentiation. Prk1, Ark1, and Akl1 comprise a subfamily of yeast proteins that are important regulators of the actin cytoskeleton and endocytosis. They share an N-terminal kinase domain but no significant homology in other regions of their sequences. The NAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270939 [Multi-domain]  Cd Length: 277  Bit Score: 75.01  E-value: 2.99e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKM--PNVfQNLVSCKRVFRELKMLCffKHDNVLSALD--ILQPPHIDYfeEIYVVTE---------L 69
Cdd:cd14037    22 VKTSNGGNRAALKRVyvNDE-HDLNVCKREIEIMKRLS--GHKNIVGYIDssANRSGNGVY--EVLLLMEyckgggvidL 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  70 MQSDLHkiivspQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLA-----RVEELDES 142
Cdd:cd14037    97 MNQRLQ------TGLTESEILKIFCDVCEAVAAMHYLKppLIHRDLKVENVLISDSGNYKLCDFGSAttkilPPQTKQGV 170
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1907080392 143 RHMTQEV---VTQYYRAPEI--LMGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd14037   171 TYVEEDIkkyTTLQYRAPEMidLYRGKPITEKSDIWALGCLLYKLC 216
STKc_GRK7 cd05607
Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; ...
90-190 3.07e-15

Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK7 (also called iodopsin kinase) belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270758 [Multi-domain]  Cd Length: 286  Bit Score: 75.33  E-value: 3.07e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  90 KVFLY--QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMgSRHYS 167
Cdd:cd05607   105 RVIFYsaQITCGILHLHSLKIVYRDMKPENVLLDDNGNCRLSDLGLA--VEVKEGKPITQRAGTNGYMAPEILK-EESYS 181
                          90       100
                  ....*....|....*....|...
gi 1907080392 168 NAIDIWSVGCIFAELLGRRILFQ 190
Cdd:cd05607   182 YPVDWFAMGCSIYEMVAGRTPFR 204
STKc_MEKK3_like_u1 cd06653
Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP) ...
5-274 3.15e-15

Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized proteins with similarity to MEKK3, MEKK2, and related proteins; they contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKKs), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270819 [Multi-domain]  Cd Length: 264  Bit Score: 75.06  E-value: 3.15e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMPNVFQNLVSCKRVFR---ELKMLCFFKHDNVLSALDILQPPHIdyfEEIYVVTELMQS-DLHKIIVS 80
Cdd:cd06653    23 DADTGRELAVKQVPFDPDSQETSKEVNAlecEIQLLKNLRHDRIVQYYGCLRDPEE---KKLSIFVEYMPGgSVKDQLKA 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMTQEVV-TQYYRAPE 158
Cdd:cd06653   100 YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASkRIQTICMSGTGIKSVTgTPYWMSPE 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 159 ILMGsRHYSNAIDIWSVGCIFAELLGRRilfqaqSPIQQldlitdllgtpsLEAMRTACEGAkahilrgphKQPSLPVLY 238
Cdd:cd06653   180 VISG-EGYGRKADVWSVACTVVEMLTEK------PPWAE------------YEAMAAIFKIA---------TQPTKPQLP 231
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1907080392 239 TLSSQATHEavhlLCRMLVFDPSKRISAKDALAHPY 274
Cdd:cd06653   232 DGVSDACRD----FLRQIFVEEKRRPTAEFLLRHPF 263
STKc_LIMK cd14154
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer ...
1-185 3.55e-15

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. Vertebrate have two members, LIMK1 and LIMK2. The LIMK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271056 [Multi-domain]  Cd Length: 272  Bit Score: 74.85  E-value: 3.55e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   1 MSVTDPRDGKRVALKKMPNVFQnlvSCKRVF-RELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSD-LHKII 78
Cdd:cd14154    10 IKVTHRETGEVMVMKELIRFDE---EAQRNFlKEVKVMRSLDHPNVLKFIGVLYKD-----KKLNLITEYIPGGtLKDVL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQE------- 148
Cdd:cd14154    82 KDMaRPLPWAQRVRFAKDIASGMAYLHSMNIIHRDLNSHNCLVREDKTVVVADFGLARliVEERLPSGNMSPSetlrhlk 161
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1907080392 149 ----------VVTQYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGR 185
Cdd:cd14154   162 spdrkkrytvVGNPYWMAPEMLNG-RSYDEKVDIFSFGIVLCEIIGR 207
STKc_Mnk2 cd14173
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
29-275 3.83e-15

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271075 [Multi-domain]  Cd Length: 288  Bit Score: 75.06  E-value: 3.83e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKMLCFFK-HDNVLSAldilqpphIDYFEE---IYVVTELMQ-----SDLHKiivsPQPLSSDHVKVFLYQILRG 99
Cdd:cd14173    45 RVFREVEMLYQCQgHRNVLEL--------IEFFEEedkFYLVFEKMRggsilSHIHR----RRHFNELEASVVVQDIASA 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 100 LKYLHSAGILHRDIKPGNLLVNSN---CVLKICDFGLARVEEL--DESRHMTQEVVT----QYYRAPEILMG----SRHY 166
Cdd:cd14173   113 LDFLHNKGIAHRDLKPENILCEHPnqvSPVKICDFDLGSGIKLnsDCSPISTPELLTpcgsAEYMAPEVVEAfneeASIY 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SNAIDIWSVGCIFaellgrRILFQAQSPiqqldlITDLLGTPSLEAMRTACEGAKA----HILRGPHKQPSLPvlytlSS 242
Cdd:cd14173   193 DKRCDLWSLGVIL------YIMLSGYPP------FVGRCGSDCGWDRGEACPACQNmlfeSIQEGKYEFPEKD-----WA 255
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1907080392 243 QATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14173   256 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 288
STKc_EIF2AK2_PKR cd14047
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
87-183 4.19e-15

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Protein Kinase regulated by RNA; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKR (or EIF2AK2) contains an N-terminal double-stranded RNA (dsRNA) binding domain and a C-terminal catalytic kinase domain. It is activated by dsRNA, which is produced as a replication intermediate in virally infected cells. It plays a key role in mediating innate immune responses to viral infection. PKR is also directly activated by PACT (protein activator of PKR) and heparin, and is inhibited by viral proteins and RNAs. PKR also regulates transcription and signal transduction in diseased cells, playing roles in tumorigenesis and neurodegenerative diseases. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PKR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270949 [Multi-domain]  Cd Length: 267  Bit Score: 74.45  E-value: 4.19e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVK--VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLarVEELDESRHMTQEVVTQYYRAPEiLMGSR 164
Cdd:cd14047   115 DKVLalEIFEQITKGVEYIHSKKLIHRDLKPSNIFLVDTGKVKIGDFGL--VTSLKNDGKRTKSKGTLSYMSPE-QISSQ 191
                          90
                  ....*....|....*....
gi 1907080392 165 HYSNAIDIWSVGCIFAELL 183
Cdd:cd14047   192 DYGKEVDIYALGLILFELL 210
STKc_IKK cd13989
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
27-181 4.34e-15

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The IKK complex functions as a master regulator of Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. It is composed of two kinases, IKKalpha and IKKbeta, and the regulatory subunit IKKgamma or NEMO (NF-kB Essential MOdulator). IKKs facilitate the release of NF-kB dimers from an inactive state, allowing them to migrate to the nucleus where they regulate gene transcription. There are two IKK pathways that regulate NF-kB signaling, called the classical (involving IKKbeta and NEMO) and non-canonical (involving IKKalpha) pathways. The classical pathway regulates the majority of genes activated by NF-kB. The IKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270891 [Multi-domain]  Cd Length: 289  Bit Score: 74.79  E-value: 4.34e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  27 CKRVFRELKMLCFFKHDNVLSALDIlqPPHIdyfeEIYVVTEL----MQ----SDLHKIIVSPQP---LSSDHVKVFLYQ 95
Cdd:cd13989    37 RERWCLEVQIMKKLNHPNVVSARDV--PPEL----EKLSPNDLpllaMEycsgGDLRKVLNQPENccgLKESEVRTLLSD 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSAGILHRDIKPGNLL---VNSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEiLMGSRHYSNAIDI 172
Cdd:cd13989   111 ISSAISYLHENRIIHRDLKPENIVlqqGGGRVIYKLIDLGYAK--ELDQGSLCTSFVGTLQYLAPE-LFESKKYTCTVDY 187

                  ....*....
gi 1907080392 173 WSVGCIFAE 181
Cdd:cd13989   188 WSFGTLAFE 196
STKc_PKA_like cd05580
Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs ...
84-183 4.81e-15

Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the cAMP-dependent protein kinases, PKA and PRKX, and similar proteins. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. PRKX is also reulated by the R subunit and is is present in many tissues including fetal and adult brain, kidney, and lung. It is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PKA-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270732 [Multi-domain]  Cd Length: 290  Bit Score: 74.54  E-value: 4.81e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELdesrhmTQEVV-TQYYRAPEILM 161
Cdd:cd05580    98 FPNDVAKFYAAEVVLALEYLHSLDIVYRDLKPENLLLDSDGHIKITDFGFAkRVKDR------TYTLCgTPEYLAPEIIL 171
                          90       100
                  ....*....|....*....|..
gi 1907080392 162 gSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05580   172 -SKGHGKAVDWWALGILIYEML 192
STKc_Nek6 cd08228
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
8-182 1.32e-14

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270865 [Multi-domain]  Cd Length: 268  Bit Score: 73.14  E-value: 1.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMpNVFQNLVSCKR--VFRELKMLCFFKHDNVLSALDilqpphiDYFE--EIYVVTELMQS-DLHKIIV--- 79
Cdd:cd08228    26 DRKPVALKKV-QIFEMMDAKARqdCVKEIDLLKQLNHPNVIKYLD-------SFIEdnELNIVLELADAgDLSQMIKyfk 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 -SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEElDESRHMTQEVVTQYYRAPE 158
Cdd:cd08228    98 kQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPE 176
                         170       180
                  ....*....|....*....|....
gi 1907080392 159 ILMgSRHYSNAIDIWSVGCIFAEL 182
Cdd:cd08228   177 RIH-ENGYNFKSDIWSLGCLLYEM 199
PKc_MEK1 cd06650
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
96-275 1.34e-14

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase 1; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK1 is a dual-specificity PK and a MAPK kinase (MAPKK or MKK) that phosphorylates and activates the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270816 [Multi-domain]  Cd Length: 319  Bit Score: 73.94  E-value: 1.34e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESrhMTQEVV-TQYYRAPEILMGSrHYSNAIDIW 173
Cdd:cd06650   112 VIKGLTYLREKhKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVgTRSYMSPERLQGT-HYSVQSDIW 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 174 SVGCIFAEL-LGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGaKAHILRGPHKQPSLPVLYTL------------ 240
Cdd:cd06650   187 SMGLSLVEMaVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG-RPLSSYGMDSRPPMAIFELLdyivnepppklp 265
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1907080392 241 SSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06650   266 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 300
STKc_TAO2 cd06634
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze ...
5-186 1.38e-14

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 possesses mitogen-activated protein kinase (MAPK) kinase kinase activity and activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating their respective MAP/ERK kinases, MEK3/MEK6 and MKK4/MKK7. It contains a long C-terminal extension with autoinhibitory segments, and is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor, interleukin 1, and Toll-like receptor. The TAO2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270804 [Multi-domain]  Cd Length: 308  Bit Score: 73.52  E-value: 1.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKMP-NVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTElmQSDLhkIIVSPQP 83
Cdd:cd06634    36 DVRNNEVVAIKKMSySGKQSNEKWQDIIKEVKFLQKLRHPNTIEYRGCYLREHTAWLVMEYCLGS--ASDL--LEVHKKP 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRhmtqeVVTQYYRAPEIL--M 161
Cdd:cd06634   112 LQEVEIAAITHGALQGLAYLHSHNMIHRDVKAGNILLTEPGLVKLGDFGSASIMAPANSF-----VGTPYWMAPEVIlaM 186
                         170       180
                  ....*....|....*....|....*
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRR 186
Cdd:cd06634   187 DEGQYDGKVDVWSLGITCIELAERK 211
STKc_MST3 cd06641
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs ...
62-275 1.49e-14

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270809 [Multi-domain]  Cd Length: 277  Bit Score: 73.18  E-value: 1.49e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  62 EIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDE 141
Cdd:cd06641    76 KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAG-QLTDT 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 142 SRHMTQEVVTQYYRAPEILMGSRHYSNAiDIWSVGCIFAELLGRRILFQAQSPIQQLDLItdllgtpsleamrtacegak 221
Cdd:cd06641   155 QIKRN*FVGTPFWMAPEVIKQSAYDSKA-DIWSLGITAIELARGEPPHSELHPMKVLFLI-------------------- 213
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 222 ahilrgPHKQPslPVLYTLSSQATHEAVHLLcrmLVFDPSKRISAKDALAHPYL 275
Cdd:cd06641   214 ------PKNNP--PTLEGNYSKPLKEFVEAC---LNKEPSFRPTAKELLKHKFI 256
STKc_DRAK1 cd14197
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
89-275 2.23e-14

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 (also called STK17A) and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. Rabbit DRAK1 has been shown to induce apoptosis in osteoclasts and overexpressio of human DRAK1 induces apoptosis in cultured fibroblast cells. DRAK1 may be involved in apoptotic signaling. The DRAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271099 [Multi-domain]  Cd Length: 271  Bit Score: 72.66  E-value: 2.23e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVL---KICDFGLARVeeLDESRHMTQEVVTQYYRAPEILmGSRH 165
Cdd:cd14197   113 VKRLMKQILEGVSFLHNNNVVHLDLKPQNILLTSESPLgdiKIVDFGLSRI--LKNSEELREIMGTPEYVAPEIL-SYEP 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 YSNAIDIWSVGCIfaellgRRILFQAQSPIQQLDLITDLLgtpSLEAMRTACEGAKAHILRGphkqpslpvlytlssqat 245
Cdd:cd14197   190 ISTATDMWSIGVL------AYVMLTGISPFLGDDKQETFL---NISQMNVSYSEEEFEHLSE------------------ 242
                         170       180       190
                  ....*....|....*....|....*....|
gi 1907080392 246 hEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14197   243 -SAIDFIKTLLIKKPENRATAEDCLKHPWL 271
STKc_DAPK2 cd14196
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs ...
15-275 2.49e-14

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK2, also called DAPK-related protein 1 (DRP-1), is a Ca2+/calmodulin (CaM)-regulated protein containing an N-terminal kinase domain, a CaM autoinhibitory site and a dimerization module. It lacks the cytoskeletal binding regions of DAPK1 and the exogenous protein has been shown to be soluble and cytoplasmic. FLAG-tagged DAPK2, however, accumulated within membrane-enclosed autophagic vesicles. It is unclear where endogenous DAPK2 is localized. DAPK2 participates in TNF-alpha and FAS-receptor induced cell death and enhances neutrophilic maturation in myeloid leukemic cells. It contributes to the induction of anoikis and its down-regulation is implicated in the beta-catenin induced resistance of malignant epithelial cells to anoikis. The DAPK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271098 [Multi-domain]  Cd Length: 269  Bit Score: 72.30  E-value: 2.49e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  15 KKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFL 93
Cdd:cd14196    40 KRQSRASRRGVSREEIEREVSILRQVLHPNIITLHDVYENR-----TDVVLILELVSGgELFDFLAQKESLSEEEATSFI 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 YQILRGLKYLHSAGILHRDIKPGN-LLVNSNCVL---KICDFGLA-RVEELDESRHM--TQEVVtqyyrAPEILmgsrHY 166
Cdd:cd14196   115 KQILDGVNYLHTKKIAHFDLKPENiMLLDKNIPIphiKLIDFGLAhEIEDGVEFKNIfgTPEFV-----APEIV----NY 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SN---AIDIWSVGCIfaellgRRILFQAQSPiqqldlitdllgtpsleamrtacegakahiLRGPHKQPSLPVLYTLS-- 241
Cdd:cd14196   186 EPlglEADMWSIGVI------TYILLSGASP------------------------------FLGDTKQETLANITAVSyd 229
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 242 ------SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14196   230 fdeeffSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 269
STKc_HIPK2 cd14227
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 2; ...
65-275 2.55e-14

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK2, the most studied HIPK, is a coregulator of many transcription factors and cofactors including homeodomain proteins (Nkx and HOX families), Smad1-4, Pax6, c-Myb, AML1, the histone acetyltransferase p300, and the tumor repressor p53, among others. It regulates gene transcription during development and in DNA damage response (DDR), and mediates cell processes such as apoptosis, survival, differentiation, and proliferation. HIPK2 mediates apoptosis by phosphorylating and activating p53 during DDR, resulting in the activation of apoptotic genes. In the absence of p53, HIPK2 targets the anti-apoptotic corepressor C-terminal binding protein (CtBP), leading to CtBP's degradation and the promotion of apoptosis. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271129 [Multi-domain]  Cd Length: 355  Bit Score: 73.20  E-value: 2.55e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  65 VVTELMQSDLHKII----VSPQPLSsdHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV----NSNCVLKICDFGLARv 136
Cdd:cd14227    93 LVFEMLEQNLYDFLkqnkFSPLPLK--YIRPILQQVATALMKLKSLGLIHADLKPENIMLvdpsRQPYRVKVIDFGSAS- 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 137 eeldesrHMTQEVVT-----QYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSlE 211
Cdd:cd14227   170 -------HVSKAVCStylqsRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPA-E 240
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 212 AMRTAceGAKAHILRGPHKQPSLPvLYTLSSQATHEA------------------------------------------- 248
Cdd:cd14227   241 YLLSA--GTKTTRFFNRDTDSPYP-LWRLKTPEDHEAetgikskearkyifnclddmaqvnmttdlegsdmlvekadrre 317
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 249 -VHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14227   318 fIDLLKKMLTIDADKRITPIETLNHPFV 345
STKc_IKK_alpha cd14039
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
29-196 2.60e-14

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IKKalpha is involved in the non-canonical or alternative pathway of regulating Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. The non-canonical pathway functions in cells lacking NEMO (NF-kB Essential MOdulator) and IKKbeta. It is induced by a subset of TNFR family members including CD40, RANK, and B cell-activating factor receptor. IKKalpha processes the Inhibitor of NF-kB (IkB)-like C-terminus of NF-kB2/p100 to produce p52, allowing the p52/RelB dimer to migrate to the nucleus. This pathway is dependent on NIK (NF-kB Inducing Kinase) which phosphorylates and activates IKKalpha. The IKKalpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270941 [Multi-domain]  Cd Length: 289  Bit Score: 72.64  E-value: 2.60e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKMLCFFKHDNVLSALDIlqPPHIDYFEE---IYVVTELMQSDLHKIIVSPQP---LSSDHVKVFLYQILRGLKY 102
Cdd:cd14039    37 RWCHEIQIMKKLNHPNVVKACDV--PEEMNFLVNdvpLLAMEYCSGGDLRKLLNKPENccgLKESQVLSLLSDIGSGIQY 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAGILHRDIKPGNLL---VNSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILMGsRHYSNAIDIWSVGC-I 178
Cdd:cd14039   115 LHENKIIHRDLKPENIVlqeINGKIVHKIIDLGYAK--DLDQGSLCTSFVGTLQYLAPELFEN-KSYTVTVDYWSFGTmV 191
                         170
                  ....*....|....*...
gi 1907080392 179 FAELLGRRILFQAQSPIQ 196
Cdd:cd14039   192 FECIAGFRPFLHNLQPFT 209
STKc_HIPK1 cd14228
Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 1; ...
65-209 2.98e-14

Catalytic domain of the Serine/Threonine Kinase, Homeodomain-Interacting Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HIPK1 has been implicated in regulating eye size, lens formation, and retinal morphogenesis during late embryogenesis. It also contributes to the regulation of haematopoiesis and leukaemogenesis by phosphorylating and repressing the transcription factor c-Myb, which is crucial in T- and B-cell development. In glucose-deprived conditions, HIPK1 phosphorylates Daxx, leading to its relocalization from the nucleus to the cytoplasm, where it binds and stabilizes ASK1 (apoptosis signal-regulating kinase 1), a mitogen-activated protein kinase (MAPK) kinase kinase that activates the JNK and p38 MAPK pathways. HIPKs, originally identified by their ability to bind homeobox factors, are nuclear proteins containing catalytic kinase and homeobox-interacting domains as well as a PEST region overlapping with the speckle-retention signal (SRS). The HIPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271130 [Multi-domain]  Cd Length: 355  Bit Score: 73.20  E-value: 2.98e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  65 VVTELMQSDLHKII----VSPQPLSsdHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL----VNSNCVLKICDFGLARv 136
Cdd:cd14228    93 LVFEMLEQNLYDFLkqnkFSPLPLK--YIRPILQQVATALMKLKSLGLIHADLKPENIMlvdpVRQPYRVKVIDFGSAS- 169
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 137 eeldesrHMTQEVVT-----QYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS 209
Cdd:cd14228   170 -------HVSKAVCStylqsRYYRAPEIILG-LPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPA 239
STKc_PIM cd14005
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
73-275 3.10e-14

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 and three PIM2 isoforms as a result of alternative translation initiation sites, while there is only one PIM3 protein. Compound knockout mice deficient of all three PIM kinases that survive the perinatal period show a profound reduction in body size, indicating that PIMs are important for body growth. The PIM subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270907 [Multi-domain]  Cd Length: 255  Bit Score: 71.88  E-value: 3.10e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  73 DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV-LKICDFGLARVeeldesrhMTQEVVT 151
Cdd:cd14005    93 DLFDFITERGALSENLARIIFRQVVEAVRHCHQRGVLHRDIKDENLLINLRTGeVKLIDFGCGAL--------LKDSVYT 164
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 152 QY-----YRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIqqldlitdllgtpsleamrtacegakahILR 226
Cdd:cd14005   165 DFdgtrvYSPPEWIRHGRYHGRPATVWSLGILLYDMLCGDIPFENDEQI----------------------------LRG 216
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1907080392 227 GPHKQPSLpvlytlssqaTHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14005   217 NVLFRPRL----------SKECCDLISRCLQFDPSKRPSLEQILSHPWF 255
PHA03211 PHA03211
serine/threonine kinase US3; Provisional
71-273 3.14e-14

serine/threonine kinase US3; Provisional


Pssm-ID: 223009 [Multi-domain]  Cd Length: 461  Bit Score: 73.77  E-value: 3.14e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  71 QSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEV 149
Cdd:PHA03211  243 RSDLYTYLGArLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGI 322
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 150 V-TQYYRAPEILMGSRhYSNAIDIWSVG-CIFAELLGRRILFQA-QSP------------IQQLDLITDLLGTPSLEAMR 214
Cdd:PHA03211  323 AgTVDTNAPEVLAGDP-YTPSVDIWSAGlVIFEAAVHTASLFSAsRGDerrpydaqilriIRQAQVHVDEFPQHAGSRLV 401
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 215 TACEGAKAHILRGPHKQPSLPVLYTLSSQATheavHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:PHA03211  402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVE----YLVCRALTFDGARRPSAAELLRLP 456
PK_KSR cd14063
Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to ...
41-194 3.21e-14

Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases, but there is some debate in this designation as a few groups have reported detecting kinase catalytic activity for KSRs, specifically KSR1. Vertebrates contain two KSR proteins, KSR1 and KSR2. The KSR subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270965 [Multi-domain]  Cd Length: 271  Bit Score: 72.00  E-value: 3.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  41 KHDN-VLSALDILQPPHIDyfeeiyVVTELMQSD-LHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN 117
Cdd:cd14063    54 RHDNlVLFMGACMDPPHLA------IVTSLCKGRtLYSLIHERKeKFDFNKTVQIAQQICQGMGYLHAKGIIHKDLKSKN 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 118 LLVNSNCVLkICDFGLARVEELDESRHMTQEVVTQY----YRAPEIL---------MGSRHYSNAIDIWSVGCIFAELLG 184
Cdd:cd14063   128 IFLENGRVV-ITDFGLFSLSGLLQPGRREDTLVIPNgwlcYLAPEIIralspdldfEESLPFTKASDVYAFGTVWYELLA 206
                         170
                  ....*....|
gi 1907080392 185 RRILFQAQSP 194
Cdd:cd14063   207 GRWPFKEQPA 216
PKc_MEK2 cd06649
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP) ...
96-236 3.26e-14

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase 2; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MEK2 is a dual-specificity PK and a MAPK kinase (MAPKK or MKK) that phosphorylates and activates the downstream targets, ERK1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132980 [Multi-domain]  Cd Length: 331  Bit Score: 72.77  E-value: 3.26e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESrhMTQEVV-TQYYRAPEILMGSrHYSNAIDIW 173
Cdd:cd06649   112 VLRGLAYLREKhQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVgTRSYMSPERLQGT-HYSVQSDIW 186
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 174 SVGCIFAEL-LGRRILfqaqsPIQQLDLITDLLGTPSLEAmrtacEGAKAHILRGPHKQPSLPV 236
Cdd:cd06649   187 SMGLSLVELaIGRYPI-----PPPDAKELEAIFGRPVVDG-----EEGEPHSISPRPRPPGRPV 240
PTKc_FGFR2 cd05101
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs ...
44-183 3.27e-14

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. FGFR2 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270679 [Multi-domain]  Cd Length: 313  Bit Score: 72.74  E-value: 3.27e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  44 NVLSALDILQPPHIDYFEEIYVVTElmqsdlhkiivspQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN 123
Cdd:cd05101   116 NLREYLRARRPPGMEYSYDINRVPE-------------EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 182
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 124 CVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05101   183 NVMKIADFGLARdINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIF 242
PTKc_FGFR4 cd05099
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs ...
53-183 3.32e-14

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. FGFR4 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR4 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133230 [Multi-domain]  Cd Length: 314  Bit Score: 72.69  E-value: 3.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  53 QPPHIDYFEEIYVVTElmqsdlhkiivspQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFG 132
Cdd:cd05099   113 RPPGPDYTFDITKVPE-------------EQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFG 179
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1907080392 133 LAR-VEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05099   180 LARgVHDIDYYKKTSNGRLPVKWMAPEALF-DRVYTHQSDVWSFGILMWEIF 230
STKc_MSK_N cd05583
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
82-272 3.36e-14

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270735 [Multi-domain]  Cd Length: 268  Bit Score: 72.04  E-value: 3.36e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVV-TQYYRAPEIL 160
Cdd:cd05583    94 EHFTESEVRIYIGEIVLALEHLHKLGIIYRDIKLENILLDSEGHVVLTDFGLSK-EFLPGENDRAYSFCgTIEYMAPEVV 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 M-GSRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIqqldlitdllgTPSLEAMRTAcEGAKaHILrgpHKQPSLPvlYT 239
Cdd:cd05583   173 RgGSDGHDKAVDWWSLGVLTYELL------TGASPF-----------TVDGERNSQS-EISK-RIL---KSHPPIP--KT 228
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1907080392 240 LSSqathEAVHLLCRMLVFDPSKRISAKDALAH 272
Cdd:cd05583   229 FSA----EAKDFILKLLEKDPKKRLGAGPRGAH 257
STKc_SPEG_rpt1 cd14108
Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle ...
32-178 3.51e-14

Catalytic kinase domain, first repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271010 [Multi-domain]  Cd Length: 255  Bit Score: 71.86  E-value: 3.51e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPHIdyfeeIYVVTELMQSD-LHKIIVSPQPLSSDhVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd14108    47 RELALLAELDHKSIVRFHDAFEKRRV-----VIIVTELCHEElLERITKRPTVCESE-VRSYMRQLLEGIEYLHQNDVLH 120
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLV--NSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCI 178
Cdd:cd14108   121 LDLKPENLLMadQKTDQVRICDFGNA--QELTPNEPQYCKYGTPEFVAPEIVNQSP-VSKVTDIWPVGVI 187
STKc_MEKK2 cd06652
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
84-186 3.72e-14

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK2 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270818 [Multi-domain]  Cd Length: 264  Bit Score: 71.61  E-value: 3.72e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMTQEVV-TQYYRAPEILM 161
Cdd:cd06652   103 LTENVTRKYTRQILEGVHYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASkRLQTICLSGTGMKSVTgTPYWMSPEVIS 182
                          90       100
                  ....*....|....*....|....*
gi 1907080392 162 GsRHYSNAIDIWSVGCIFAELLGRR 186
Cdd:cd06652   183 G-EGYGRKADIWSVGCTVVEMLTEK 206
PLN00034 PLN00034
mitogen-activated protein kinase kinase; Provisional
32-185 3.96e-14

mitogen-activated protein kinase kinase; Provisional


Pssm-ID: 215036 [Multi-domain]  Cd Length: 353  Bit Score: 72.93  E-value: 3.96e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILqpphiDYFEEIYVVTELM-QSDLHKIIVSPQPLSSDHVKvflyQILRGLKYLHSAGILH 110
Cdd:PLN00034  121 REIEILRDVNHPNVVKCHDMF-----DHNGEIQVLLEFMdGGSLEGTHIADEQFLADVAR----QILSGIAYLHRRHIVH 191
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNCVLKICDFGLARV--EELDESrhmTQEVVTQYYRAPEI----LMGSRHYSNAIDIWSVGCIFAEL-L 183
Cdd:PLN00034  192 RDIKPSNLLINSAKNVKIADFGVSRIlaQTMDPC---NSSVGTIAYMSPERintdLNHGAYDGYAGDIWSLGVSILEFyL 268

                  ..
gi 1907080392 184 GR 185
Cdd:PLN00034  269 GR 270
STKc_SnRK2 cd14662
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
30-274 4.34e-14

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK2 is represented in this cd. SnRK2s are involved in plant response to abiotic stresses and abscisic acid (ABA)-dependent plant development. The SnRK2s subfamily is in turn classed into three subgroups, all 3 of which are represented in this CD. Group 1 comprises kinases not activated by ABA, group 2 - kinases not activated or activated very weakly by ABA (depending on plant species), and group 3 - kinases strongly activated by ABA. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271132 [Multi-domain]  Cd Length: 257  Bit Score: 71.34  E-value: 4.34e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALD-ILQPPHIDYFEEIYVVTELMQSdlhkiIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI 108
Cdd:cd14662    43 VQREIINHRSLRHPNIIRFKEvVLTPTHLAIVMEYAAGGELFER-----ICNAGRFSEDEARYFFQQLISGVSYCHSMQI 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 109 LHRDIKPGNLLVNSNCV--LKICDFGLARVEELDESRHMTqeVVTQYYRAPEILMGSRHYSNAIDIWSVGC-IFAELLGR 185
Cdd:cd14662   118 CHRDLKLENTLLDGSPAprLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLSRKEYDGKVADVWSCGVtLYVMLVGA 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 186 RILFQAQSPIQQLDLITDLLGTpsleamrtacegakahilrgphkQPSLPVLYTLSSqathEAVHLLCRMLVFDPSKRIS 265
Cdd:cd14662   196 YPFEDPDDPKNFRKTIQRIMSV-----------------------QYKIPDYVRVSQ----DCRHLLSRIFVANPAKRIT 248

                  ....*....
gi 1907080392 266 AKDALAHPY 274
Cdd:cd14662   249 IPEIKNHPW 257
PK_eIF2AK_GCN2_rpt1 cd14012
Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or ...
32-274 4.52e-14

Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: GCN2, protein kinase regulated by RNA (PKR), heme-regulated inhibitor kinase (HRI), and PKR-like endoplasmic reticulum kinase (PERK). GCN2 is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kappaB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. The degenerate pseudokinase domain of GCN2 may function as a regulatory domain. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270914 [Multi-domain]  Cd Length: 254  Bit Score: 71.24  E-value: 4.52e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPHIDYFE-EIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 109
Cdd:cd14012    47 KELESLKKLRHPNLVSYLAFSIERRGRSDGwKVYLLTEYAPgGSLSELLDSVGSVPLDTARRWTLQLLEALEYLHRNGVV 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 110 HRDIKPGNLLVNSNC---VLKICDFGLARvEELDESRHMTQEVVTQ-YYRAPEILMGSRHYSNAIDIWSVGCIFAELLgr 185
Cdd:cd14012   127 HKSLHAGNVLLDRDAgtgIVKLTDYSLGK-TLLDMCSRGSLDEFKQtYWLPPELAQGSKSPTRKTDVWDLGLLFLQML-- 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 186 rilfQAQSPIQQLDLITDLLGTPSLEAmrtacegakahilrgphkqpslpvlytlssqathEAVHLLCRMLVFDPSKRIS 265
Cdd:cd14012   204 ----FGLDVLEKYTSPNPVLVSLDLSA----------------------------------SLQDFLSKCLSLDPKKRPT 245

                  ....*....
gi 1907080392 266 AKDALAHPY 274
Cdd:cd14012   246 ALELLPHEF 254
STKc_DAPK3 cd14195
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs ...
25-275 4.99e-14

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK3, also called DAP-like kinase (DLK) and zipper-interacting protein kinase (ZIPk), contains an N-terminal kinase domain and a C-terminal region with nuclear localization signals (NLS) and a leucine zipper motif that mediates homodimerization and interaction with other leucine zipper proteins. It interacts with Par-4, a protein that contains a death domain and interacts with actin filaments. DAPK3 is present in both the cytoplasm and nucleus. Its co-expression with Par-4 results in the co-localization of the two proteins to actin filaments. In addition to cell death, DAPK3 is also implicated in mediating cell motility and the contraction of smooth muscles. The DAPK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271097 [Multi-domain]  Cd Length: 271  Bit Score: 71.57  E-value: 4.99e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  25 VSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYL 103
Cdd:cd14195    50 VSREEIEREVNILREIQHPNIITLHDIFENK-----TDVVLILELVSGgELFDFLAEKESLTEEEATQFLKQILDGVHYL 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 104 HSAGILHRDIKPGNLLV----NSNCVLKICDFGLA-RVEELDESRHM--TQEVVtqyyrAPEILmGSRHYSNAIDIWSVG 176
Cdd:cd14195   125 HSKRIAHFDLKPENIMLldknVPNPRIKLIDFGIAhKIEAGNEFKNIfgTPEFV-----APEIV-NYEPLGLEADMWSIG 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 177 CIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILrgphkqpslpvlytlssqatheavhllcRML 256
Cdd:cd14195   199 VITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIR----------------------------RLL 250
                         250
                  ....*....|....*....
gi 1907080392 257 VFDPSKRISAKDALAHPYL 275
Cdd:cd14195   251 VKDPKKRMTIAQSLEHSWI 269
PHA03207 PHA03207
serine/threonine kinase US3; Provisional
73-273 5.65e-14

serine/threonine kinase US3; Provisional


Pssm-ID: 165473 [Multi-domain]  Cd Length: 392  Bit Score: 72.57  E-value: 5.65e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  73 DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN--SNCVLKicDFGLARveELDESRHMTQE-- 148
Cdd:PHA03207  171 DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDepENAVLG--DFGAAC--KLDAHPDTPQCyg 246
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 149 -VVTQYYRAPEiLMGSRHYSNAIDIWSVGCIFAELLGRRILF---QAQSPIQQLDLITDLLGTPSLEAMR----TACEGA 220
Cdd:PHA03207  247 wSGTLETNSPE-LLALDPYCAKTDIWSAGLVLFEMSVKNVTLfgkQVKSSSSQLRSIIRCMQVHPLEFPQngstNLCKHF 325
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1907080392 221 K--AHILRGPHKQPSLPVLYTLssqaTHEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:PHA03207  326 KqyAIVLRPPYTIPPVIRKYGM----HMDVEYLIAKMLTFDQEFRPSAQDILSLP 376
STKc_IRAK4 cd14158
Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; ...
7-183 5.75e-14

Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain, and a C-terminal domain; IRAK-4 lacks the C-terminal domain. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK4 plays a critical role in NFkB activation by its interaction with MyD88, which acts as a scaffold that enables IRAK4 to phosphorylate and activate IRAK1 and/or IRAK2. It also plays an important role in type I IFN production induced by TLR7/8/9. The IRAK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271060 [Multi-domain]  Cd Length: 288  Bit Score: 71.38  E-value: 5.75e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKM-PNVFQNLVSCKRVF-RELKMLCFFKHDNVLSALDILQ--PPHIDYFEeiYVVTELMQSDLHKIIVSPq 82
Cdd:cd14158    36 INDKNVAVKKLaAMVDISTEDLTKQFeQEIQVMAKCQHENLVELLGYSCdgPQLCLVYT--YMPNGSLLDRLACLNDTP- 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-TQYYRAPEILM 161
Cdd:cd14158   113 PLSWHMRCKIAQGTANGINYLHENNHIHRDIKSANILLDETFVPKISDFGLARASEKFSQTIMTERIVgTTAYMAPEALR 192
                         170       180
                  ....*....|....*....|..
gi 1907080392 162 GsrHYSNAIDIWSVGCIFAELL 183
Cdd:cd14158   193 G--EITPKSDIFSFGVVLLEII 212
STKc_SLK cd06643
Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer ...
33-182 6.20e-14

Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270811 [Multi-domain]  Cd Length: 283  Bit Score: 71.60  E-value: 6.20e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFFKHDNVLSALDILqpphidYFE-EIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGIL 109
Cdd:cd06643    52 EIDILASCDHPNIVKLLDAF------YYEnNLWILIEFCAGGAVDAVMLEleRPLTEPQIRVVCKQTLEALVYLHENKII 125
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 110 HRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHmTQEVVTQYYRAPEILM----GSRHYSNAIDIWSVGCIFAEL 182
Cdd:cd06643   126 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTLQRR-DSFIGTPYWMAPEVVMcetsKDRPYDYKADVWSLGVTLIEM 201
STKc_MAP3K12_13 cd14059
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase ...
71-183 6.25e-14

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K12 is also called MAPK upstream kinase (MUK), dual leucine zipper-bearing kinase (DLK) or leucine-zipper protein kinase (ZPK). It is involved in the c-Jun N-terminal kinase (JNK) pathway that directly regulates axonal regulation through the phosphorylation of microtubule-associated protein 1B (MAP1B). It also regulates the differentiation of many cell types including adipocytes and may play a role in adipogenesis. MAP3K13, also called leucine zipper-bearing kinase (LZK), directly phosphorylates and activates MKK7, which in turn activates the JNK pathway. It also activates NF-kB through IKK activation and this activity is enhanced by antioxidant protein-1 (AOP-1). MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAP2Ks (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K12/13 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270961 [Multi-domain]  Cd Length: 237  Bit Score: 70.60  E-value: 6.25e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  71 QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQeVV 150
Cdd:cd14059    65 YGQLYEVLRAGREITPSLLVDWSKQIASGMNYLHLHKIIHRDLKSPNVLVTYNDVLKISDFGTSK-ELSEKSTKMSF-AG 142
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1907080392 151 TQYYRAPEILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd14059   143 TVAWMAPEVIR-NEPCSEKVDIWSFGVVLWELL 174
STKc_RSK_N cd05582
N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; ...
85-212 6.62e-14

N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270734 [Multi-domain]  Cd Length: 317  Bit Score: 71.66  E-value: 6.62e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILmgSR 164
Cdd:cd05582    95 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEDGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVV--NR 171
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 165 H-YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDL-LGTP---SLEA 212
Cdd:cd05582   172 RgHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAkLGMPqflSPEA 224
STKc_MLCK2 cd14190
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 2; STKs catalyze ...
4-275 6.89e-14

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK2 (or MYLK2) phosphorylates myosin regulatory light chain and controls the contraction of skeletal muscles. MLCK2 contains a single kinase domain near the C-terminus followed by a regulatory segment containing an autoinhibitory Ca2+/calmodulin binding site. The MLCK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271092 [Multi-domain]  Cd Length: 261  Bit Score: 71.10  E-value: 6.89e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   4 TDPRDGKRVALKKMPNvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQSD--LHKIIVSP 81
Cdd:cd14190    24 TEKRTGLKLAAKVINK--QNSKDKEMVLLEIQVMNQLNHRNLIQLYEAIETPN-----EIVLFMEYVEGGelFERIVDED 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVN-SNCVLKICDFGLARveeldesRHMTQEVVTQYYRAPEI 159
Cdd:cd14190    97 YHLTEVDAMVFVRQICEGIQFMHQMRVLHLDLKPENiLCVNrTGHQVKIIDFGLAR-------RYNPREKLKVNFGTPEF 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 L----MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLItdLLGTPSLEamrtacEGAKAHIlrgphkqpslp 235
Cdd:cd14190   170 LspevVNYDQVSFPTDMWSMGVITYMLLSGLSPFLGDDDTETLNNV--LMGNWYFD------EETFEHV----------- 230
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1907080392 236 vlytlssqaTHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14190   231 ---------SDEAKDFVSNLIIKERSARMSATQCLKHPWL 261
STKc_GRK4_like cd05605
Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs ...
95-191 6.95e-14

Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. They contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270756 [Multi-domain]  Cd Length: 285  Bit Score: 71.23  E-value: 6.95e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWS 174
Cdd:cd05605   110 EITCGLEHLHSERIVYRDLKPENILLDDHGHVRISDLGLA--VEIPEGETIRGRVGTVGYMAPEVVKNER-YTFSPDWWG 186
                          90
                  ....*....|....*..
gi 1907080392 175 VGCIFAELLGRRILFQA 191
Cdd:cd05605   187 LGCLIYEMIEGQAPFRA 203
STKc_DRAK2 cd14198
The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
84-275 7.62e-14

The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2 (also called STK17B). Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. DRAK2 has been implicated in inducing or enhancing apoptosis in beta cells, fibroblasts, and lymphoid cells, where it is highly expressed. It is involved in regulating many immune processes including the germinal center (GC) reaction, responses to thymus-dependent antigens, activated T cell survival, memory T cell responses. It may be involved in the development of autoimmunity. The DRAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271100 [Multi-domain]  Cd Length: 270  Bit Score: 71.11  E-value: 7.62e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVL---KICDFGLARveELDESRHMTQEVVTQYYRAPEIL 160
Cdd:cd14198   107 VSENDIIRLIRQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLgdiKIVDFGMSR--KIGHACELREIMGTPEYLAPEIL 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 mgsrHY---SNAIDIWSVGCIfaellgRRILFQAQSPIQQLDLITDLLGTPSLEamrtacegakahilrgphkqpslpVL 237
Cdd:cd14198   185 ----NYdpiTTATDMWNIGVI------AYMLLTHESPFVGEDNQETFLNISQVN------------------------VD 230
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1907080392 238 YTLS--SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14198   231 YSEEtfSSVSQLATDFIQKLLVKNPEKRPTAEICLSHSWL 270
STKc_MLK1 cd14145
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the ...
30-191 7.86e-14

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK1 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K9. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Little is known about the specific function of MLK1. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. There could be redundancy in the function of MLKs. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271047 [Multi-domain]  Cd Length: 270  Bit Score: 70.84  E-value: 7.86e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALDI-LQPPHIdyfeeiYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI 108
Cdd:cd14145    52 VRQEAKLFAMLKHPNIIALRGVcLKEPNL------CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHCEAI 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 109 ---LHRDIKPGNLLVN--------SNCVLKICDFGLARveELDESRHMTQeVVTQYYRAPEILMGSRhYSNAIDIWSVGC 177
Cdd:cd14145   126 vpvIHRDLKSSNILILekvengdlSNKILKITDFGLAR--EWHRTTKMSA-AGTYAWMAPEVIRSSM-FSKGSDVWSYGV 201
                         170
                  ....*....|....
gi 1907080392 178 IFAELLGRRILFQA 191
Cdd:cd14145   202 LLWELLTGEVPFRG 215
STKc_MAP4K3_like cd06613
Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like ...
83-183 8.00e-14

Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270788 [Multi-domain]  Cd Length: 259  Bit Score: 70.80  E-value: 8.00e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQYYRAPEILM 161
Cdd:cd06613    93 PLSELQIAYVCRETLKGLAYLHSTGKIHRDIKGANILLTEDGDVKLADFGVS--AQLTATIAKRKSFIgTPYWMAPEVAA 170
                          90       100
                  ....*....|....*....|....*..
gi 1907080392 162 GSRH--YSNAIDIWSVG--CI-FAELL 183
Cdd:cd06613   171 VERKggYDGKCDIWALGitAIeLAELQ 197
PTKc_Tec_like cd05059
Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
31-182 8.04e-14

Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Tec-like subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nonreceptor PTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. Tec kinases play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). The Tec-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173637 [Multi-domain]  Cd Length: 256  Bit Score: 70.55  E-value: 8.04e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  31 FRELKMLCFFKHDNV--LSALDILQPPhidyfeeIYVVTELMQSD--LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd05059    47 IEEAKVMMKLSHPKLvqLYGVCTKQRP-------IFIVTEYMANGclLNYLRERRGKFQTEQLLEMCKDVCEAMEYLESN 119
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 107 GILHRDIKPGNLLVNSNCVLKICDFGLARVEELDEsrhMTQEVVTQY---YRAPEILMGSRhYSNAIDIWSVGCIFAEL 182
Cdd:cd05059   120 GFIHRDLAARNCLVGEQNVVKVSDFGLARYVLDDE---YTSSVGTKFpvkWSPPEVFMYSK-FSSKSDVWSFGVLMWEV 194
STKc_nPKC_theta cd05619
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze ...
61-277 8.37e-14

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270770 [Multi-domain]  Cd Length: 331  Bit Score: 71.49  E-value: 8.37e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEL 139
Cdd:cd05619    79 ENLFFVMEYLNGgDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 140 DESRHMTQeVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQLDlitdllgtpsleamrtacEG 219
Cdd:cd05619   159 GDAKTSTF-CGTPDYIAPEILLGQK-YNTSVDWWSFGVLLYEML------IGQSPFHGQD------------------EE 212
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 220 AKAHILRgpHKQPSLPVLYTLssqathEAVHLLCRMLVFDPSKRISAK-DALAHPYLDE 277
Cdd:cd05619   213 ELFQSIR--MDNPFYPRWLEK------EAKDILVKLFVREPERRLGVRgDIRQHPFFRE 263
PKc_MKK3_6 cd06617
Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase ...
96-198 1.00e-13

Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase Kinases 3 and 6; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 play roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. The MKK3/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173729 [Multi-domain]  Cd Length: 283  Bit Score: 70.92  E-value: 1.00e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEIL---MGSRHYSNAID 171
Cdd:cd06617   112 IVKALEYLHSKlSVIHRDVKPSNVLINRNGQVKLCDFGIS--GYLVDSVAKTIDAGCKPYMAPERInpeLNQKGYDVKSD 189
                          90       100
                  ....*....|....*....|....*...
gi 1907080392 172 IWSVGCIFAEL-LGRRILFQAQSPIQQL 198
Cdd:cd06617   190 VWSLGITMIELaTGRFPYDSWKTPFQQL 217
PK_STRAD cd08216
Pseudokinase domain of STE20-related kinase adapter protein; The pseudokinase domain shows ...
8-275 1.14e-13

Pseudokinase domain of STE20-related kinase adapter protein; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the serine/threonine kinase (STK), LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270856 [Multi-domain]  Cd Length: 315  Bit Score: 71.17  E-value: 1.14e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLsaldilqpPHIDYF---EEIYVVTELMQ----SDLHKIiVS 80
Cdd:cd08216    24 TNTLVAVKKINLESDSKEDLKFLQQEILTSRQLQHPNIL--------PYVTSFvvdNDLYVVTPLMAygscRDLLKT-HF 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHM----TQEVVTQYY 154
Cdd:cd08216    95 PEGLPELAIAFILRDVLNALEYIHSKGYIHRSVKASHILISGDGKVVLSGLRYAYsmVKHGKRQRVVhdfpKSSEKNLPW 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEILMGSRH-YSNAIDIWSVGCIFAELLGRRILFQAQSPIQQldLITDLLGT-PSLEAMRTAC--EGAKAHILRG--- 227
Cdd:cd08216   175 LSPEVLQQNLLgYNEKSDIYSVGITACELANGVVPFSDMPATQM--LLEKVRGTtPQLLDCSTYPleEDSMSQSEDSste 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1907080392 228 -PHKQPSLPVLYTLS-SQATHEAVhLLCrmLVFDPSKRISAKDALAHPYL 275
Cdd:cd08216   253 hPNNRDTRDIPYQRTfSEAFHQFV-ELC--LQRDPELRPSASQLLAHSFF 299
STKc_Titin cd14104
Catalytic domain of the Giant Serine/Threonine Kinase Titin; STKs catalyze the transfer of the ...
30-278 1.16e-13

Catalytic domain of the Giant Serine/Threonine Kinase Titin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Titin, also called connectin, is a muscle-specific elastic protein and is the largest known protein to date. It contains multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains, and a single kinase domain near the C-terminus. It spans half of the sarcomere, the repeating contractile unit of striated muscle, and performs mechanical and catalytic functions. Titin contributes to the passive force generated when muscle is stretched during relaxation. Its kinase domain phosphorylates and regulates the muscle protein telethonin, which is required for sarcomere formation in differentiating myocytes. In addition, titin binds many sarcomere proteins and acts as a molecular scaffold for filament formation during myofibrillogenesis. The Titin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271006 [Multi-domain]  Cd Length: 277  Bit Score: 70.66  E-value: 1.16e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14104    43 VKKEISILNIARHRNILRLHESFESH-----EELVMIFEFISGvDIFERITTARfELNEREIVSYVRQVCEALEFLHSKN 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLVNS--NCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGR 185
Cdd:cd14104   118 IGHFDIRPENIIYCTrrGSYIKIIEFGQSR--QLKPGDKFRLQYTSAEFYAPEVHQ-HESVSTATDMWSLGCLVYVLLSG 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 186 RILFQAQSPIQQLDLITDLLGTPSLEAMRtacegakahilrgphkqpslpvlytlssQATHEAVHLLCRMLVFDPSKRIS 265
Cdd:cd14104   195 INPFEAETNQQTIENIRNAEYAFDDEAFK----------------------------NISIEALDFVDRLLVKERKSRMT 246
                         250
                  ....*....|...
gi 1907080392 266 AKDALAHPYLDEG 278
Cdd:cd14104   247 AQEALNHPWLKQG 259
PKc_LIMK_like cd14065
Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of ...
7-185 1.25e-13

Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. Members of this subfamily include LIMK, Testicular or testis-specific protein kinase (TESK), and similar proteins. LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270967 [Multi-domain]  Cd Length: 252  Bit Score: 69.83  E-value: 1.25e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNVFQNLVSckrVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQPLS 85
Cdd:cd14065    15 RETGKVMVMKELKRFDEQRS---FLKEVKLMRRLSHPNILRFIGVCVKDN-----KLNFITEYVNGgTLEELLKSMDEQL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  86 SDHVKVFL-YQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLAR----VEELDESRHMTQEVV-TQYYRA 156
Cdd:cd14065    87 PWSQRVSLaKDIASGMAYLHSKNIIHRDLNSKNCLVreaNRGRNAVVADFGLARempdEKTKKPDRKKRLTVVgSPYWMA 166
                         170       180
                  ....*....|....*....|....*....
gi 1907080392 157 PEILMGsRHYSNAIDIWSVGCIFAELLGR 185
Cdd:cd14065   167 PEMLRG-ESYDEKVDVFSFGIVLCEIIGR 194
STKc_STK10 cd06644
Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase ...
84-275 1.43e-13

Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase or LOK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK10/LOK is also called polo-like kinase kinase 1 in Xenopus (xPlkk1). It is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132975 [Multi-domain]  Cd Length: 292  Bit Score: 70.45  E-value: 1.43e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArVEELDESRHMTQEVVTQYYRAPEIL--- 160
Cdd:cd06644   107 LTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVS-AKNVKTLQRRDSFIGTPYWMAPEVVmce 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 -MGSRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQLDlitdllgtpsleAMRTACEGAKahilrgphkqpSLPVLYT 239
Cdd:cd06644   186 tMKDTPYDYKADIWSLGITLIEMA------QIEPPHHELN------------PMRVLLKIAK-----------SEPPTLS 236
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1907080392 240 LSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06644   237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFV 272
STKc_Sid2p_like cd05600
Catalytic domain of Fungal Sid2p-like Protein Serine/Threonine Kinases; STKs catalyze the ...
84-183 1.55e-13

Catalytic domain of Fungal Sid2p-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. The Sid2p-like group is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270751 [Multi-domain]  Cd Length: 386  Bit Score: 71.22  E-value: 1.55e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-----------VEELDESRHMTQEVVTQ 152
Cdd:cd05600   108 LSEEHARFYIAEMFAAISSLHQLGYIHRDLKPENFLIDSSGHIKLTDFGLASgtlspkkiesmKIRLEEVKNTAFLELTA 187
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392 153 YYR-------------------------APEILMGsRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05600   188 KERrniyramrkedqnyansvvgspdymAPEVLRG-EGYDLTVDYWSLGCILFECL 242
PTZ00263 PTZ00263
protein kinase A catalytic subunit; Provisional
9-196 1.55e-13

protein kinase A catalytic subunit; Provisional


Pssm-ID: 140289 [Multi-domain]  Cd Length: 329  Bit Score: 70.62  E-value: 1.55e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALK--------KMPNVfQNLVSCKRVFREL------KMLCFFKHDNVLsaldilqpphidYFEEIYVVTELMQSDL 74
Cdd:PTZ00263   43 GEYYAIKclkkreilKMKQV-QHVAQEKSILMELshpfivNMMCSFQDENRV------------YFLLEFVVGGELFTHL 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKIIVSPqplsSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMTQEvvtqy 153
Cdd:PTZ00263  110 RKAGRFP----NDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAkKVPDRTFTLCGTPE----- 180
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1907080392 154 YRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQ 196
Cdd:PTZ00263  181 YLAPEVIQ-SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222
STKc_PKB_beta cd05595
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); ...
84-275 1.64e-13

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain.The PKB-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173686 [Multi-domain]  Cd Length: 323  Bit Score: 70.81  E-value: 1.64e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMgS 163
Cdd:cd05595    92 FTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGITDGATMKTFCGTPEYLAPEVLE-D 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 164 RHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITdllgtpsLEAMRtacegakahilrgphkqpsLPvlYTLSSq 243
Cdd:cd05595   170 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-------MEEIR-------------------FP--RTLSP- 220
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1907080392 244 athEAVHLLCRMLVFDPSKRI-----SAKDALAHPYL 275
Cdd:cd05595   221 ---EAKSLLAGLLKKDPKQRLgggpsDAKEVMEHRFF 254
STKc_LIMK1 cd14221
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the ...
28-185 1.68e-13

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK1 activation is induced by bone morphogenic protein, vascular endothelial growth factor, and thrombin. It plays roles in microtubule disassembly and cell cycle progression, and is critical in the regulation of neurite outgrowth. LIMK1 knockout mice show abnormalities in dendritic spine morphology and synaptic function. LIMK1 is one of the genes deleted in patients with Williams Syndrome, which is characterized by distinct craniofacial features, cardiovascular problems, as well as behavioral and neurological abnormalities. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271123 [Multi-domain]  Cd Length: 267  Bit Score: 69.98  E-value: 1.68e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVF-RELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKV-FLYQILRGLKYLH 104
Cdd:cd14221    34 QRTFlKEVKVMRCLEHPNVLKFIGVLYKD-----KRLNFITEYIKGgTLRGIIKSMDSHYPWSQRVsFAKDIASGMAYLH 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 105 SAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQE-----------VVTQYYRAPEILMGsRHYSNAID 171
Cdd:cd14221   109 SMNIIHRDLNSHNCLVRENKSVVVADFGLARlmVDEKTQPEGLRSLkkpdrkkrytvVGNPYWMAPEMING-RSYDEKVD 187
                         170
                  ....*....|....
gi 1907080392 172 IWSVGCIFAELLGR 185
Cdd:cd14221   188 VFSFGIVLCEIIGR 201
PKc_TESK cd14155
Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; ...
32-185 2.20e-13

Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TESK proteins phosphorylate cofilin and induce actin cytoskeletal reorganization. In the Drosphila eye, TESK is required for epithelial cell organization. Mammals contain two TESK proteins, TESK1 and TESK2, which are highly expressed in testis and play roles in spermatogenesis. TESK1 is found in testicular germ cells while TESK2 is expressed mainly in nongerminal Sertoli cells. TESK1 is stimulated by integrin-mediated signaling pathways. It regulates cell spreading and focal adhesion formation. The TESK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271057 [Multi-domain]  Cd Length: 253  Bit Score: 69.43  E-value: 2.20e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQpphidYFEEIYVVTELMQS-DLHKIIVSPQPLSSDhVKVFL-YQILRGLKYLHSAGIL 109
Cdd:cd14155    37 REVQLMNRLSHPNILRFMGVCV-----HQGQLHALTEYINGgNLEQLLDSNEPLSWT-VRVKLaLDIARGLSYLHSKGIF 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 110 HRDikpgnlLVNSNCVLK---------ICDFGLARVEELDESRHMTQEVV-TQYYRAPEILMGSRhYSNAIDIWSVGCIF 179
Cdd:cd14155   111 HRD------LTSKNCLIKrdengytavVGDFGLAEKIPDYSDGKEKLAVVgSPYWMAPEVLRGEP-YNEKADVFSYGIIL 183

                  ....*.
gi 1907080392 180 AELLGR 185
Cdd:cd14155   184 CEIIAR 189
PHA03212 PHA03212
serine/threonine kinase US3; Provisional
96-272 2.36e-13

serine/threonine kinase US3; Provisional


Pssm-ID: 165478 [Multi-domain]  Cd Length: 391  Bit Score: 70.79  E-value: 2.36e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE-ELDESRHM--TQEVVTQyyrAPEiLMGSRHYSNAIDI 172
Cdd:PHA03212  191 VLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPvDINANKYYgwAGTIATN---APE-LLARDPYGPAVDI 266
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 173 WSVGCIFAEL-LGRRILFQAQ------SPIQQLDLITDLLGTPSLE-------AMRTACEGAKAHILRGPHKQPSLPVLY 238
Cdd:PHA03212  267 WSAGIVLFEMaTCHDSLFEKDgldgdcDSDRQIKLIIRRSGTHPNEfpidaqaNLDEIYIGLAKKSSRKPGSRPLWTNLY 346
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907080392 239 TLSSqathEAVHLLCRMLVFDPSKRISAKDALAH 272
Cdd:PHA03212  347 ELPI----DLEYLICKMLAFDAHHRPSAEALLDF 376
PTKc_Frk_like cd05068
Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
61-185 2.43e-13

Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Frk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270653 [Multi-domain]  Cd Length: 267  Bit Score: 69.36  E-value: 2.43e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELM---------QSDLHKIIVsPQPLSsdhvkvFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDF 131
Cdd:cd05068    76 EPIYIITELMkhgslleylQGKGRSLQL-PQLID------MAAQVASGMAYLESQNYIHRDLAARNVLVGENNICKVADF 148
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 132 GLARV---EELDESRHMTQEVVTqyYRAPEILMGSRhYSNAIDIWSVGCIFAELL--GR 185
Cdd:cd05068   149 GLARVikvEDEYEAREGAKFPIK--WTAPEAANYNR-FSIKSDVWSFGILLTEIVtyGR 204
STKc_PKC cd05570
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer ...
96-274 2.65e-13

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270722 [Multi-domain]  Cd Length: 318  Bit Score: 69.94  E-value: 2.65e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSV 175
Cdd:cd05570   105 ICLALQFLHERGIIYRDLKLDNVLLDAEGHIKIADFGMCK-EGIWGGNTTSTFCGTPDYIAPEILREQD-YGFSVDWWAL 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 176 GCIFAELLGRRILFQAQSpiqQLDLITDLLgtpsleamrtacegakahilrgpHKQPSLPVlyTLSSqathEAVHLLCRM 255
Cdd:cd05570   183 GVLLYEMLAGQSPFEGDD---EDELFEAIL-----------------------NDEVLYPR--WLSR----EAVSILKGL 230
                         170       180
                  ....*....|....*....|....
gi 1907080392 256 LVFDPSKRI-----SAKDALAHPY 274
Cdd:cd05570   231 LTKDPARRLgcgpkGEADIKAHPF 254
STKc_Unc-89_rpt2 cd14112
Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Uncoordinated ...
30-275 2.84e-13

Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Uncoordinated protein 89; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nematode Unc-89 gene, through alternative promoter use and splicing, encodes at least six major isoforms (Unc-89A to Unc-89F) of giant muscle proteins that are homologs for the vetebrate obscurin. In flies, five isoforms of Unc-89 have been detected: four in the muscles of adult flies (two in the indirect flight muscle and two in other muscles) and another isoform in the larva. Unc-89 in nematodes is required for normal muscle cell architecture. In flies, it is necessary for the development of a symmetrical sarcomere in the flight muscles. Unc-89 proteins contain several adhesion and signaling domains including multiple copies of the immunoglobulin (Ig) domain, as well as fibronectin type III (FN3), SH3, RhoGEF, and PH domains. The nematode Unc-89 isoforms D, C, D, and F contain two kinase domain with B and F having two complete kinase domains while the first repeat of C and D are partial domains. Homology modeling suggests that the first kinase repeat of Unc-89 may be catalytically inactive, a pseudokinase, while the second kinase repeat may be active. The Unc-89 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271014 [Multi-domain]  Cd Length: 259  Bit Score: 69.10  E-value: 2.84e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALDILQPPHIDYFeeiyvVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 109
Cdd:cd14112    47 AVREFESLRTLQHENVQRLIAAFKPSNFAYL-----VMEKLQEDVFTRFSSNDYYSEEQVATTVRQILDALHYLHFKGIA 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 110 HRDIKPGNLLVNS--NCVLKICDFGLAR-VEELDesrhMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGrr 186
Cdd:cd14112   122 HLDVQPDNIMFQSvrSWQVKLVDFGRAQkVSKLG----KVPVDGDTDWASPEFHNPETPITVQSDIWGLGVLTFCLLS-- 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 187 ilfqaqspiqqldlitdllGTPSLEAMRTACEGAKAHILRGPHKQPSLPVlytlssQATHEAVHLLCRMLVFDPSKRISA 266
Cdd:cd14112   196 -------------------GFHPFTSEYDDEEETKENVIFVKCRPNLIFV------EATQEALRFATWALKKSPTRRMRT 250

                  ....*....
gi 1907080392 267 KDALAHPYL 275
Cdd:cd14112   251 DEALEHRWL 259
STKc_STK25 cd06642
Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); ...
62-212 3.07e-13

Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). It is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may be involved in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270810 [Multi-domain]  Cd Length: 277  Bit Score: 69.32  E-value: 3.07e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  62 EIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDE 141
Cdd:cd06642    76 KLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAG-QLTDT 154
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 142 SRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDlLGTPSLEA 212
Cdd:cd06642   155 QIKRNTFVGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK-NSPPTLEG 223
PTKc_FGFR1 cd05098
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs ...
79-183 3.10e-13

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. FGFR1 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270678 [Multi-domain]  Cd Length: 302  Bit Score: 69.66  E-value: 3.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAP 157
Cdd:cd05098   127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARdIHHIDYYKKTTNGRLPVKWMAP 206
                          90       100
                  ....*....|....*....|....*.
gi 1907080392 158 EILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05098   207 EALF-DRIYTHQSDVWSFGVLLWEIF 231
STKc_PKB_gamma cd05593
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); ...
84-275 3.47e-13

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270745 [Multi-domain]  Cd Length: 348  Bit Score: 69.72  E-value: 3.47e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMgS 163
Cdd:cd05593   112 FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCK-EGITDAATMKTFCGTPEYLAPEVLE-D 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 164 RHYSNAIDIWSVGCIFAELLGRRILF--QAQSPIQQLDLITDLlgtpsleamrtacegakahilrgphKQPSlpvlyTLS 241
Cdd:cd05593   190 NDYGRAVDWWGLGVVMYEMMCGRLPFynQDHEKLFELILMEDI-------------------------KFPR-----TLS 239
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1907080392 242 SqathEAVHLLCRMLVFDPSKRI-----SAKDALAHPYL 275
Cdd:cd05593   240 A----DAKSLLSGLLIKDPNKRLgggpdDAKEIMRHSFF 274
PTKc_Src_like cd05034
Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
61-185 3.86e-13

Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. The Src-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270630 [Multi-domain]  Cd Length: 248  Bit Score: 68.46  E-value: 3.86e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELM---------QSDLHKIIVSPQPLSsdhvkvFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDF 131
Cdd:cd05034    63 EPIYIVTELMskgslldylRTGEGRALRLPQLID------MAAQIASGMAYLESRNYIHRDLAARNILVGENNVCKVADF 136
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 132 GLARVEELDE--SRHMTQEVVTqyYRAPE-ILMGSrhYSNAIDIWSVGCIFAELL--GR 185
Cdd:cd05034   137 GLARLIEDDEytAREGAKFPIK--WTAPEaALYGR--FTIKSDVWSFGILLYEIVtyGR 191
STKc_LATS cd05598
Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the ...
59-306 4.86e-13

Catalytic domain of the Serine/Threonine Kinase, Large Tumor Suppressor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270749 [Multi-domain]  Cd Length: 333  Bit Score: 69.27  E-value: 4.86e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  59 YFEEIYVVTELMQSDLHKIIVSPQPLSsdhvKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA---R 135
Cdd:cd05598    77 YFVMDYIPGGDLMSLLIKKGIFEEDLA----RFYIAELVCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCtgfR 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 136 VEElDESRHMTQEVV-TQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLItdllgtpsleam 213
Cdd:cd05598   153 WTH-DSKYYLAHSLVgTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPAEtQLKVI------------ 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 214 rtacegAKAHILRGPHKQpslpvlyTLSSQATHEAVHLLCrmlvfDPSKRISAKDAL---AHPY---LDEGRLRYHTCMC 287
Cdd:cd05598   219 ------NWRTTLKIPHEA-------NLSPEAKDLILRLCC-----DAEDRLGRNGADeikAHPFfagIDWEKLRKQKAPY 280
                         250
                  ....*....|....*....
gi 1907080392 288 KccfSTSTGRVYTSDFEPV 306
Cdd:cd05598   281 I---PTIRHPTDTSNFDPV 296
PTKc_FGFR3 cd05100
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs ...
94-183 5.00e-13

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. FGFR3 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173652 [Multi-domain]  Cd Length: 334  Bit Score: 69.28  E-value: 5.00e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 YQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDI 172
Cdd:cd05100   141 YQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARdVHNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDV 219
                          90
                  ....*....|.
gi 1907080392 173 WSVGCIFAELL 183
Cdd:cd05100   220 WSFGVLLWEIF 230
STKc_nPKC_theta_like cd05592
Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and ...
95-324 5.41e-13

Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. The nPKC-theta-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270744 [Multi-domain]  Cd Length: 320  Bit Score: 68.95  E-value: 5.41e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMGsRHYSNAIDIWS 174
Cdd:cd05592   104 EIICGLQFLHSRGIIYRDLKLDNVLLDREGHIKIADFGMCKENIYGENKASTF-CGTPDYIAPEILKG-QKYNQSVDWWS 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 175 VGCIFAELLgrrilfQAQSPIQQLDlitdllgtpsleamrtacEGAKAHILRgpHKQPSLPVLYtlssqaTHEAVHLLCR 254
Cdd:cd05592   182 FGVLLYEML------IGQSPFHGED------------------EDELFWSIC--NDTPHYPRWL------TKEAASCLSL 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 255 MLVFDPSKRisakdaLAHPYLDEGRLRYHtcmckCCFST-STGRVYTSDFEPVTNPK---------FDDTF--------- 315
Cdd:cd05592   230 LLERNPEKR------LGVPECPAGDIRDH-----PFFKTiDWDKLERREIDPPFKPKvksandvsnFDPDFtmekpvltp 298
                         250
                  ....*....|.
gi 1907080392 316 --EKNLSSVRQ 324
Cdd:cd05592   299 vdKKLLASMDQ 309
STKc_BMPR2_AMHR2 cd14054
Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and ...
96-244 5.66e-13

Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and Anti-Muellerian Hormone Type II Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR2 and AMHR2 belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors (GDFs), and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. BMPR2 and AMHR2 act primarily as a receptor for BMPs and AMH, respectively. BMPs induce bone and cartilage formation, as well as regulate tooth, kidney, skin, hair, haematopoietic, and neuronal development. Mutations in BMPR2A is associated with familial pulmonary arterial hypertension. AMH is mainly responsible for the regression of Mullerian ducts during male sex differentiation. It is expressed exclusively by somatic cells of the gonads. Mutations in either AMH or AMHR2 cause persistent Mullerian duct syndrome (PMDS), a rare form of male pseudohermaphroditism characterized by the presence of Mullerian derivatives (ovary and tubes) in otherwise normally masculine males. The BMPR2/AMHR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270956 [Multi-domain]  Cd Length: 300  Bit Score: 68.93  E-value: 5.66e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHS---------AGILHRDIKPGNLLVNS--NCVlkICDFGLA---------RVEELDESRHMTQEVVTQYYR 155
Cdd:cd14054   102 LTRGLAYLHTdlrrgdqykPAIAHRDLNSRNVLVKAdgSCV--ICDFGLAmvlrgsslvRGRPGAAENASISEVGTLRYM 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 156 APEILMGS---RHYSNA---IDIWSVGCIFAELLGR-RILFQAQSPIQ-QLDLITDLLGTPSLEAMrtacegakaHILRG 227
Cdd:cd14054   180 APEVLEGAvnlRDCESAlkqVDVYALGLVLWEIAMRcSDLYPGESVPPyQMPYEAELGNHPTFEDM---------QLLVS 250
                         170
                  ....*....|....*...
gi 1907080392 228 PHKQ-PSLPVLYTLSSQA 244
Cdd:cd14054   251 REKArPKFPDAWKENSLA 268
STKc_MLK4 cd14146
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the ...
30-183 6.50e-13

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK4 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The specific function of MLK4 is yet to be determined. Mutations in the kinase domain of MLK4 have been detected in colorectal cancers. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271048 [Multi-domain]  Cd Length: 268  Bit Score: 68.14  E-value: 6.50e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  30 VFRELKMLCFFKHDNVLSALDI-LQPPHIDYFEEiYVVTELMQSDLHKIIVSPQPLSS----DHVKV-FLYQILRGLKYL 103
Cdd:cd14146    40 VRQEAKLFSMLRHPNIIKLEGVcLEEPNLCLVME-FARGGTLNRALAAANAAPGPRRArripPHILVnWAVQIARGMLYL 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 104 HSAG---ILHRDIKPGNLLVNS--------NCVLKICDFGLARveELDESRHMTQeVVTQYYRAPEILMGSRhYSNAIDI 172
Cdd:cd14146   119 HEEAvvpILHRDLKSSNILLLEkiehddicNKTLKITDFGLAR--EWHRTTKMSA-AGTYAWMAPEVIKSSL-FSKGSDI 194
                         170
                  ....*....|.
gi 1907080392 173 WSVGCIFAELL 183
Cdd:cd14146   195 WSYGVLLWELL 205
pknD PRK13184
serine/threonine-protein kinase PknD;
5-196 6.60e-13

serine/threonine-protein kinase PknD;


Pssm-ID: 183880 [Multi-domain]  Cd Length: 932  Bit Score: 70.18  E-value: 6.60e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   5 DPRDGKRVALKKM-PNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSdLHKIIVSPQP 83
Cdd:PRK13184   23 DPVCSRRVALKKIrEDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKS-LLKSVWQKES 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDH-----VKVFL---YQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDE-------------- 141
Cdd:PRK13184  102 LSKELaektsVGAFLsifHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEedlldidvdernic 181
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 142 SRHMT---QEVVTQYYRAPEILMGSRHySNAIDIWSVGCIFAELL----------GRRILFQAQ--SPIQ 196
Cdd:PRK13184  182 YSSMTipgKIVGTPDYMAPERLLGVPA-SESTDIYALGVILYQMLtlsfpyrrkkGRKISYRDVilSPIE 250
STKc_Sck1_like cd05586
Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine ...
62-182 7.77e-13

Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Sck1 and similar fungal proteins. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270738 [Multi-domain]  Cd Length: 330  Bit Score: 68.75  E-value: 7.77e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  62 EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELD 140
Cdd:cd05586    70 DLYLVTDYMSGgELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKNDIVYRDLKPENILLDANGHIALCDFGLSKADLTD 149
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1907080392 141 ESRHMTQEVVTQYYrAPEILMGSRHYSNAIDIWSVGCIFAEL 182
Cdd:cd05586   150 NKTTNTFCGTTEYL-APEVLLDEKGYTKMVDFWSLGVLVFEM 190
STKc_MSK1_N cd05613
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
84-183 9.49e-13

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270764 [Multi-domain]  Cd Length: 290  Bit Score: 68.10  E-value: 9.49e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGS 163
Cdd:cd05613   102 FTENEVQIYIGEIVLALEHLHKLGIIYRDIKLENILLDSSGHVVLTDFGLSKEFLLDENERAYSFCGTIEYMAPEIVRGG 181
                          90       100
                  ....*....|....*....|.
gi 1907080392 164 RH-YSNAIDIWSVGCIFAELL 183
Cdd:cd05613   182 DSgHDKAVDWWSLGVLMYELL 202
STKc_LRRK cd14000
Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the ...
26-195 9.72e-13

Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. Vertebrates contain two members, LRRK1 and LRRK2, which show complementary expression in the brain. Mutations in LRRK2 are linked to both familial and sporadic forms of Parkinson's disease. The normal roles of LRRKs are not clearly defined. They may be involved in mitogen-activated protein kinase (MAPK) pathways, protein translation control, programmed cell death pathways, and cytoskeletal dynamics. The LRRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270902 [Multi-domain]  Cd Length: 275  Bit Score: 67.64  E-value: 9.72e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  26 SCK--RVFR-ELKMLCFFKHDNVLSALDILQPPhidyfeeIYVVTEL-----MQSDLHKIIVSPQPLSSDHVKVFLYQIL 97
Cdd:cd14000    50 AMKnfRLLRqELTVLSHLHHPSIVYLLGIGIHP-------LMLVLELaplgsLDHLLQQDSRSFASLGRTLQQRIALQVA 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  98 RGLKYLHSAGILHRDIKPGNLLV-----NSNCVLKICDFGLARveeldESRHMTQEVV--TQYYRAPEILMGSRHYSNAI 170
Cdd:cd14000   123 DGLRYLHSAMIIYRDLKSHNVLVwtlypNSAIIIKIADYGISR-----QCCRMGAKGSegTPGFRAPEIARGNVIYNEKV 197
                         170       180
                  ....*....|....*....|....*..
gi 1907080392 171 DIWSVGCIFAELL--GRRILFQAQSPI 195
Cdd:cd14000   198 DVFSFGMLLYEILsgGAPMVGHLKFPN 224
STKc_CRIK cd05601
Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze ...
83-193 9.97e-13

Catalytic domain of the Serine/Threonine Kinase, Citron Rho-interacting kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CRIK (also called citron kinase) is an effector of the small GTPase Rho. It plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. CRIK contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270752 [Multi-domain]  Cd Length: 328  Bit Score: 68.49  E-value: 9.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQE--VVTQYYRAPEIL 160
Cdd:cd05601    98 IFEESMARFYLAELVLAIHSLHSMGYVHRDIKPENILIDRTGHIKLADFGSA--AKLSSDKTVTSKmpVGTPDYIAPEVL 175
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1907080392 161 M-----GSRHYSNAIDIWSVGCIFAELLGRRILFQAQS 193
Cdd:cd05601   176 TsmnggSKGTYGVECDWWSLGIVAYEMLYGKTPFTEDT 213
STKc_Mnk1 cd14174
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase ...
26-275 1.04e-12

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK signal-integrating kinases (Mnks) are MAPK-activated protein kinases and is comprised by a group of four proteins, produced by alternative splicing from two genes (Mnk1 and Mnk2). The isoforms of Mnk1 (1a/1b) and Mnk2 (2a/2b) differ at their C-termini, with the a-form having a longer C-terminus containing a MAPK-binding region. All Mnks contain a catalytic kinase domain and a polybasic region at the N-terminus which binds importin and the eukaryotic initiation factor eIF4G. The best characterized Mnk substrate is eIF4G, whose phosphorylation may promote the export of certain mRNAs from the nucleus. Mnk also phosphorylate substrates that bind to AU-rich elements that regulate mRNA stability and translation. Mnks have also been implicated in tyrosine kinase receptor signaling, inflammation, and cell prolieration or survival. The Mnk subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271076 [Multi-domain]  Cd Length: 289  Bit Score: 67.75  E-value: 1.04e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  26 SCKRVFRELKMLCFFK-HDNVLSAldilqpphIDYFEE---IYVVTE-LMQSDLHKIIVSPQPLSSDHVKVFLYQILRGL 100
Cdd:cd14174    42 SRSRVFREVETLYQCQgNKNILEL--------IEFFEDdtrFYLVFEkLRGGSILAHIQKRKHFNEREASRVVRDIASAL 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 101 KYLHSAGILHRDIKPGNLLVNSN---CVLKICDFGLARVEELDES------RHMTQEVVTQYYRAPEILM----GSRHYS 167
Cdd:cd14174   114 DFLHTKGIAHRDLKPENILCESPdkvSPVKICDFDLGSGVKLNSActpittPELTTPCGSAEYMAPEVVEvftdEATFYD 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 168 NAIDIWSVGCIFAELLGRRILFQAQSPiqqldliTDlLGTPSLEAMRTACEGAKAHILRGPHKQPSlpvlyTLSSQATHE 247
Cdd:cd14174   194 KRCDLWSLGVILYIMLSGYPPFVGHCG-------TD-CGWDRGEVCRVCQNKLFESIQEGKYEFPD-----KDWSHISSE 260
                         250       260
                  ....*....|....*....|....*...
gi 1907080392 248 AVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14174   261 AKDLISKLLVRDAKERLSAAQVLQHPWV 288
PTKc_Jak2_rpt2 cd14205
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the ...
9-183 1.11e-12

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 is widely expressed in many tissues and is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271107 [Multi-domain]  Cd Length: 284  Bit Score: 67.73  E-value: 1.11e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVFQNLVsckRVF-RELKMLCFFKHDNVLSALDILQPPHidyFEEIYVVTELMQSDLHKIIVSPQPLSSD 87
Cdd:cd14205    33 GEVVAVKKLQHSTEEHL---RDFeREIEILKSLQHDNIVKYKGVCYSAG---RRNLRLIMEYLPYGSLRDYLQKHKERID 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLY--QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQ--YYRAPEILMGS 163
Cdd:cd14205   107 HIKLLQYtsQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESpiFWYAPESLTES 186
                         170       180
                  ....*....|....*....|
gi 1907080392 164 RhYSNAIDIWSVGCIFAELL 183
Cdd:cd14205   187 K-FSVASDVWSFGVVLYELF 205
STKc_NDR_like cd05599
Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs ...
84-183 1.26e-12

Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270750 [Multi-domain]  Cd Length: 324  Bit Score: 68.02  E-value: 1.26e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESrHMTQEVV-TQYYRAPEILMg 162
Cdd:cd05599    98 LTEEETRFYIAETVLAIESIHKLGYIHRDIKPDNLLLDARGHIKLSDFGLCT--GLKKS-HLAYSTVgTPDYIAPEVFL- 173
                          90       100
                  ....*....|....*....|.
gi 1907080392 163 SRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05599   174 QKGYGKECDWWSLGVIMYEML 194
PTKc_EphR_A cd05066
Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze ...
93-183 1.30e-12

Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10. Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphA receptors and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. EphRs comprise the largest subfamily of receptor PTKs (RTKs). EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270651 [Multi-domain]  Cd Length: 267  Bit Score: 67.20  E-value: 1.30e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  93 LYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELD-ESRHMTQ-EVVTQYYRAPEILmGSRHYSNAI 170
Cdd:cd05066   112 LRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDpEAAYTTRgGKIPIRWTAPEAI-AYRKFTSAS 190
                          90
                  ....*....|...
gi 1907080392 171 DIWSVGCIFAELL 183
Cdd:cd05066   191 DVWSYGIVMWEVM 203
STKc_obscurin_rpt2 cd14110
Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
1-195 1.42e-12

Catalytic kinase domain, second repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271012 [Multi-domain]  Cd Length: 257  Bit Score: 66.87  E-value: 1.42e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   1 MSVTDPRDGKRVALKKMPNVFQNLVSckrVFRELKMLCFFKHDNVL---SAldILQPPHIDYFEEIYVVTELMQSdlhki 77
Cdd:cd14110    20 RQCEEKRSGQMLAAKIIPYKPEDKQL---VLREYQVLRRLSHPRIAqlhSA--YLSPRHLVLIEELCSGPELLYN----- 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAP 157
Cdd:cd14110    90 LAERNSYSEAEVTDYLWQILSAVDYLHSRRILHLDLRSENMIITEKNLLKIVDLGNAQPFNQGKVLMTDKKGDYVETMAP 169
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1907080392 158 EILMGSRHYSNAiDIWSVGCIfaellgRRILFQAQSPI 195
Cdd:cd14110   170 ELLEGQGAGPQT-DIWAIGVT------AFIMLSADYPV 200
STKc_nPKC_delta cd05620
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze ...
95-183 1.46e-12

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173710 [Multi-domain]  Cd Length: 316  Bit Score: 67.66  E-value: 1.46e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQeVVTQYYRAPEILMGSRhYSNAIDIWS 174
Cdd:cd05620   104 EIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTF-CGTPDYIAPEILQGLK-YTFSVDWWS 181

                  ....*....
gi 1907080392 175 VGCIFAELL 183
Cdd:cd05620   182 FGVLLYEML 190
STKc_TSSK6-like cd14164
Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs ...
28-275 1.64e-12

Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK6, also called SSTK, is expressed at the head of elongated sperm. It can phosphorylate histones and associate with heat shock protens HSP90 and HSC70. Male mice deficient in TSSK6 are infertile, showing spermatogenic impairment including reduced sperm counts, impaired DNA condensation, abnormal morphology and decreased motility rates. The TSSK6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271066 [Multi-domain]  Cd Length: 256  Bit Score: 66.81  E-value: 1.64e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPHidyfEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14164    45 KFLPRELSILRRVNHPNIVQMFECIEVAN----GRLYIVMEAAATDLLQKIQEVHHIPKDLARDMFAQMVGAVNYLHDMN 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLVNSNC-VLKICDFGLARVEElDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIfaellgrr 186
Cdd:cd14164   121 IVHRDLKCENILLSADDrKIKIADFGFARFVE-DYPELSTTFCGSRAYTPPEVILGTPYDPKKYDVWSLGVV-------- 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 187 ilfqaqspiqqldlitdllgtpsLEAMRTACEGAKAHILRGPHKQPSlPVLYTLSSQATHEAVHLLCRMLVFDPSKRISA 266
Cdd:cd14164   192 -----------------------LYVMVTGTMPFDETNVRRLRLQQR-GVLYPSGVALEEPCRALIRTLLQFNPSTRPSI 247

                  ....*....
gi 1907080392 267 KDALAHPYL 275
Cdd:cd14164   248 QQVAGNSWL 256
STKc_NIM1 cd14075
Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the ...
11-275 1.76e-12

Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIM1 is a widely-expressed kinase belonging to the AMP-activated protein kinase (AMPK) subfamily. Although present in most tissues, NIM1 kinase activity is only observed in the brain and testis. NIM1 is capable of autophosphorylating and activating itself, but may be present in other tissues in the inactive form. The physiological function of NIM1 has yet to be elucidated. The NIM1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270977 [Multi-domain]  Cd Length: 255  Bit Score: 66.59  E-value: 1.76e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  11 RVALK-----KMPNVFQNLVSckrvfRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQ-SDLHKIIVSPQPL 84
Cdd:cd14075    29 KVAIKildktKLDQKTQRLLS-----REISSMEKLHHPNIIRLYEVVETL-----SKLHLVMEYASgGELYTKISTEGKL 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESrhMTQEVVTQYYRAPEILMGSR 164
Cdd:cd14075    99 SESEAKPLFAQIVSAVKHMHENNIIHRDLKAENVFYASNNCVKVGDFGFSTHAKRGET--LNTFCGSPPYAAPELFKDEH 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 165 HYSNAIDIWSVGCIFAELLGRRILFQAQSpiqqldlitdllgTPSLeamrtacegaKAHILRGPhkqpslpvlYTLSSQA 244
Cdd:cd14075   177 YIGIYVDIWALGVLLYFMVTGVMPFRAET-------------VAKL----------KKCILEGT---------YTIPSYV 224
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1907080392 245 THEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14075   225 SEPCQELIRGILQPVPSDRYSIDEIKNSEWL 255
STKc_SRPK3 cd14218
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 3; STKs ...
63-275 1.89e-12

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPK3 is highly expressed in the heart and skeletal muscles, and is controlled by a muscle-specific enhancer that is regulated by MEF2. It may play an important role in muscle development. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271120 [Multi-domain]  Cd Length: 365  Bit Score: 67.74  E-value: 1.89e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLL--VNSNCVLKIC-------- 129
Cdd:cd14218    93 VCMVLEVLGHQLLKWIIKSnyQGLPLPCVKSILRQVLQGLDYLHTkCKIIHTDIKPENILmcVDEGYVRRLAaeatiwqq 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 130 -----------DFGLA-----------------RVEELDES----RHMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGC 177
Cdd:cd14218   173 agapppsgssvSFGASdflvnplepqnadkirvKIADLGNAcwvhKHFTEDIQTRQYRALEVLIGA-EYGTPADIWSTAC 251
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 178 IFAELLGRRILFQAQS------PIQQLDLITDLLG-TPSLEAM--RTACE-----GAKAHILRGPHkQPSLPVL---YTL 240
Cdd:cd14218   252 MAFELATGDYLFEPHSgedytrDEDHIAHIVELLGdIPPHFALsgRYSREyfnrrGELRHIKNLKH-WGLYEVLvekYEW 330
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1907080392 241 SSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14218   331 PLEQAAQFTDFLLPMMEFLPEKRATAAQCLQHPWL 365
STKc_GRK6 cd05630
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs ...
95-273 2.06e-12

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK6 is widely expressed in many tissues and is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270779 [Multi-domain]  Cd Length: 285  Bit Score: 66.97  E-value: 2.06e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWS 174
Cdd:cd05630   110 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNER-YTFSPDWWA 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 175 VGCIFAELLgrrilfQAQSPIQQldlitdllgtpsleamrtacegAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCR 254
Cdd:cd05630   187 LGCLLYEMI------AGQSPFQQ----------------------RKKKIKREEVERLVKEVPEEYSEKFSPQARSLCSM 238
                         170       180
                  ....*....|....*....|....
gi 1907080392 255 MLVFDPSKRI-----SAKDALAHP 273
Cdd:cd05630   239 LLCKDPAERLgcrggGAREVKEHP 262
PKc_Dusty cd13975
Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze ...
63-179 2.12e-12

Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Dusty protein kinase is also called Receptor-interacting protein kinase 5 (RIPK5 or RIP5) or RIP-homologous kinase. It is widely distributed in the central nervous system, and may be involved in inducing both caspase-dependent and caspase-independent cell death. The Dusty subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270877 [Multi-domain]  Cd Length: 262  Bit Score: 66.75  E-value: 2.12e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSDLHKIIVSPQPLSSD-HVKVflyQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELde 141
Cdd:cd13975    80 VLLIMERLHRDLYTGIKAGLSLEERlQIAL---DVVEGIRFLHSQGLVHRDIKLKNVLLDKKNRAKITDLGFCKPEAM-- 154
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1907080392 142 srhMTQEVV-TQYYRAPEILMGsrHYSNAIDIWSVGCIF 179
Cdd:cd13975   155 ---MSGSIVgTPIHMAPELFSG--KYDNSVDVYAFGILF 188
STKc_myosinIIIB_N cd06639
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze ...
3-275 2.38e-12

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. They may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270808 [Multi-domain]  Cd Length: 291  Bit Score: 66.94  E-value: 2.38e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMP-------------NVFQNLVSCKRVFRELKMlcFFKHDNVLSAldilqpphidyfeEIYVVTEL 69
Cdd:cd06639    41 VTNKKDGSLAAVKILDpisdvdeeieaeyNILRSLPNHPNVVKFYGM--FYKADQYVGG-------------QLWLVLEL 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  70 MQ----SDLHK-IIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESR- 143
Cdd:cd06639   106 CNggsvTELVKgLLKCGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS--AQLTSARl 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 144 HMTQEVVTQYYRAPEILMGSRHYSNA----IDIWSVGCIFAELLGrrilfqaqspiqqldlitdllGTPSLEAMrtaceg 219
Cdd:cd06639   184 RRNTSVGTPFWMAPEVIACEQQYDYSydarCDVWSLGITAIELAD---------------------GDPPLFDM------ 236
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 220 akaHILRGPHKQPSLPVLYTLS-SQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd06639   237 ---HPVKALFKIPRNPPPTLLNpEKWCRGFSHFISQCLIKDFEKRPSVTHLLEHPFI 290
PKc_TOPK cd14001
Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer ...
94-183 2.82e-12

Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer T-cell-originated protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TOPK, also called PDZ-binding kinase (PBK), is activated at the early stage of mitosis and plays a critical role in cytokinesis. It partly functions as a mitogen-activated protein kinase (MAPK) kinase and is capable of phosphorylating p38, JNK1, and ERK2. TOPK also plays a role in DNA damage sensing and repair through its phosphorylation of histone H2AX. It contributes to cancer development and progression by downregulating the function of tumor suppressor p53 and reducing cell-cycle regulatory proteins. TOPK is found highly expressed in breast and skin cancer cells. The TOPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270903 [Multi-domain]  Cd Length: 292  Bit Score: 66.65  E-value: 2.82e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 YQILRGLKYLHS-AGILHRDIKPGNLLVNSNC-VLKICDFGLARveELDESRHMT-----QEVVTQYYRAPEILMGSRHY 166
Cdd:cd14001   117 LSIARALEYLHNeKKILHGDIKSGNVLIKGDFeSVKLCDFGVSL--PLTENLEVDsdpkaQYVGTEPWKAKEALEEGGVI 194
                          90
                  ....*....|....*..
gi 1907080392 167 SNAIDIWSVGCIFAELL 183
Cdd:cd14001   195 TDKADIFAYGLVLWEMM 211
PTKc_VEGFR2 cd05103
Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2; ...
71-183 2.91e-12

Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270681 [Multi-domain]  Cd Length: 343  Bit Score: 66.93  E-value: 2.91e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  71 QSDLHKiivspQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQE 148
Cdd:cd05103   168 QEDLYK-----DFLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARdiYKDPDYVRKGDAR 242
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1907080392 149 VVTQYYrAPEILMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05103   243 LPLKWM-APETIF-DRVYTIQSDVWSFGVLLWEIF 275
PTKc_EphR_A2 cd05063
Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the ...
40-183 3.12e-12

Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. EphRs comprise the largest subfamily of receptor PTKs (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 133194 [Multi-domain]  Cd Length: 268  Bit Score: 66.15  E-value: 3.12e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  40 FKHDNVLSALDIlqpphIDYFEEIYVVTELMQSD-LHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN 117
Cdd:cd05063    63 FSHHNIIRLEGV-----VTKFKPAMIITEYMENGaLDKYLRDHDgEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARN 137
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 118 LLVNSNCVLKICDFGLARVEELD-ESRHMTQ-EVVTQYYRAPEILmGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05063   138 ILVNSNLECKVSDFGLSRVLEDDpEGTYTTSgGKIPIRWTAPEAI-AYRKFTSASDVWSFGIVMWEVM 204
STKc_beta_ARK cd05606
Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs ...
66-197 3.15e-12

Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The beta-ARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270757 [Multi-domain]  Cd Length: 279  Bit Score: 66.31  E-value: 3.15e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  66 VTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArveeLDESRH 144
Cdd:cd05606    76 ILDLMNGgDLHYHLSQHGVFSEAEMRFYAAEVILGLEHMHNRFIVYRDLKPANILLDEHGHVRISDLGLA----CDFSKK 151
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 145 MTQEVV-TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQ 197
Cdd:cd05606   152 KPHASVgTHGYMAPEVLQKGVAYDSSADWFSLGCMLYKLL------KGHSPFRQ 199
STKc_IKK_beta cd14038
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
89-196 3.27e-12

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IKKbeta is involved in the classical pathway of regulating Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. The classical pathway regulates the majority of genes activated by NF-kB including those encoding cytokines, chemokines, leukocyte adhesion molecules, and anti-apoptotic factors. It involves NEMO (NF-kB Essential MOdulator)- and IKKbeta-dependent phosphorylation and degradation of the Inhibitor of NF-kB (IkB), which liberates NF-kB dimers (typified by the p50-p65 heterodimer) from an inactive IkB/dimeric NF-kB complex, enabling them to migrate to the nucleus where they regulate gene transcription. The IKKbeta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270940 [Multi-domain]  Cd Length: 290  Bit Score: 66.52  E-value: 3.27e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEiLMGSRH 165
Cdd:cd14038   103 ILTLLSDISSALRYLHENRIIHRDLKPENIVLQqgeQRLIHKIIDLGYAK--ELDQGSLCTSFVGTLQYLAPE-LLEQQK 179
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1907080392 166 YSNAIDIWSVGCI-FAELLGRRILFQAQSPIQ 196
Cdd:cd14038   180 YTVTVDYWSFGTLaFECITGFRPFLPNWQPVQ 211
PTKc_EphR cd05033
Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
93-183 3.53e-12

Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor PTKs (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EphB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis.The EphR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270629 [Multi-domain]  Cd Length: 266  Bit Score: 65.86  E-value: 3.53e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  93 LYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQE-VVTQYYRAPEILmGSRHYSNAID 171
Cdd:cd05033   112 LRGIASGMKYLSEMNYVHRDLAARNILVNSDLVCKVSDFGLSRRLEDSEATYTTKGgKIPIRWTAPEAI-AYRKFTSASD 190
                          90
                  ....*....|..
gi 1907080392 172 IWSVGCIFAELL 183
Cdd:cd05033   191 VWSFGIVMWEVM 202
STKc_B-Raf cd14151
Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) ...
95-235 3.60e-12

Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. B-Raf activates ERK with the strongest magnitude, compared with other Raf kinases. Mice embryos deficient in B-Raf die around midgestation due to vascular hemorrhage caused by apoptotic endothelial cells. Mutations in B-Raf have been implicated in initiating tumorigenesis and tumor progression, and are found in malignant cutaneous melanoma, papillary thyroid cancer, as well as in ovarian and colorectal carcinomas. Most oncogenic B-Raf mutations are located at the activation loop of the kinase and surrounding regions; the V600E mutation accounts for around 90% of oncogenic mutations. The V600E mutant constitutively activates MEK, resulting in sustained activation of ERK. B-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The B-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271053 [Multi-domain]  Cd Length: 274  Bit Score: 66.24  E-value: 3.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-TQYYRAPEI--LMGSRHYSNAID 171
Cdd:cd14151   112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSgSILWMAPEVirMQDKNPYSFQSD 191
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 172 IWSVGCIFAELLGRRILFqaqSPIQQLDLITDLLG----TPSLEAMRTACEGAKAHIL-----RGPHKQPSLP 235
Cdd:cd14151   192 VYAFGIVLYELMTGQLPY---SNINNRDQIIFMVGrgylSPDLSKVRSNCPKAMKRLMaeclkKKRDERPLFP 261
STKc_GRK5 cd05632
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs ...
95-275 4.20e-12

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270780 [Multi-domain]  Cd Length: 313  Bit Score: 66.15  E-value: 4.20e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWS 174
Cdd:cd05632   112 EILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAV--KIPEGESIRGRVGTVGYMAPEVLNNQR-YTLSPDYWG 188
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 175 VGCIFAELLgrrilfQAQSPIQqldlitdllgtpsleamrtaceGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCR 254
Cdd:cd05632   189 LGCLIYEMI------EGQSPFR----------------------GRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKM 240
                         170       180
                  ....*....|....*....|....*.
gi 1907080392 255 MLVFDPSKRISAKDALA-----HPYL 275
Cdd:cd05632   241 LLTKDPKQRLGCQEEGAgevkrHPFF 266
PTKc_VEGFR1 cd14207
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
82-183 4.33e-12

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR1 (or Flt1) binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. VEGFR1 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271109 [Multi-domain]  Cd Length: 340  Bit Score: 66.56  E-value: 4.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQEVVTQYYrAPEI 159
Cdd:cd14207   175 RPLTMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARdiYKNPDYVRKGDARLPLKWM-APES 253
                          90       100
                  ....*....|....*....|....
gi 1907080392 160 LMgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd14207   254 IF-DKIYSTKSDVWSYGVLLWEIF 276
STKc_MEKK3 cd06651
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
84-186 4.59e-12

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK3 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270817 [Multi-domain]  Cd Length: 271  Bit Score: 65.87  E-value: 4.59e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMTQEVV-TQYYRAPEILM 161
Cdd:cd06651   108 LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASkRLQTICMSGTGIRSVTgTPYWMSPEVIS 187
                          90       100
                  ....*....|....*....|....*
gi 1907080392 162 GsRHYSNAIDIWSVGCIFAELLGRR 186
Cdd:cd06651   188 G-EGYGRKADVWSLGCTVVEMLTEK 211
STKc_Twitchin_like cd14114
The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs ...
58-275 4.60e-12

The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Caenorhabditis elegans and Aplysia californica Twitchin, Drosophila melanogaster Projectin, and similar proteins. These are very large muscle proteins containing multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains and a single kinase domain near the C-terminus. Twitchin and Projectin are both associated with thick filaments. Twitchin is localized in the outer parts of A-bands and is involved in regulating muscle contraction. It interacts with the myofibrillar proteins myosin and actin in a phosphorylation-dependent manner, and may be involved in regulating the myosin cross-bridge cycle. The kinase activity of Twitchen is activated by Ca2+ and the Ca2+ binding protein S100A1. Projectin is associated with the end of thick filaments and is a component of flight muscle connecting filaments. The kinase domain of Projectin may play roles in autophosphorylation and transphosphorylation, which impact the formation of myosin filaments. The Twitchin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271016 [Multi-domain]  Cd Length: 259  Bit Score: 65.68  E-value: 4.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  58 DYFE---EIYVVTELMQSD--LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL--VNSNCVLKICD 130
Cdd:cd14114    66 DAFEddnEMVLILEFLSGGelFERIAAEHYKMSEAEVINYMRQVCEGLCHMHENNIVHLDIKPENIMctTKRSNEVKLID 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 131 FGLARVEELDESRHMTqeVVTQYYRAPEILMGSR--HYSnaiDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP 208
Cdd:cd14114   146 FGLATHLDPKESVKVT--TGTAEFAAPEIVEREPvgFYT---DMWAVGVLSYVLLSGLSPFAGENDDETLRNVKSCDWNF 220
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 209 SLEAMRTACEGAKAHILrgphkqpslpvlytlssqatheavhllcRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14114   221 DDSAFSGISEEAKDFIR----------------------------KLLLADPNKRMTIHQALEHPWL 259
PTKc_Met_Ron cd05058
Catalytic domain of the Protein Tyrosine Kinases, Met and Ron; PTKs catalyze the transfer of ...
8-185 4.81e-12

Catalytic domain of the Protein Tyrosine Kinases, Met and Ron; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor PTKs (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. The Met/Ron subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270649 [Multi-domain]  Cd Length: 262  Bit Score: 65.57  E-value: 4.81e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRV--ALKKMpNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQP----PHIdyfeeiyVVTELMQSDLHKIIVSP 81
Cdd:cd05058    20 DGQKIhcAVKSL-NRITDIEEVEQFLKEGIIMKDFSHPNVLSLLGICLPsegsPLV-------VLPYMKHGDLRNFIRSE 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 Q--PLSSDHVKvFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR---VEELDESRHMTQEVVTQYYRA 156
Cdd:cd05058    92 ThnPTVKDLIG-FGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARdiyDKEYYSVHNHTGAKLPVKWMA 170
                         170       180
                  ....*....|....*....|....*....
gi 1907080392 157 PEILMGSRhYSNAIDIWSVGCIFAELLGR 185
Cdd:cd05058   171 LESLQTQK-FTTKSDVWSFGVLLWELMTR 198
PKc_PBS2_like cd06622
Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
41-275 5.05e-12

Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. The PBS2 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132953 [Multi-domain]  Cd Length: 286  Bit Score: 65.64  E-value: 5.05e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  41 KHDNVLSALDILQ---PPHI-----DYFEE--IYVVTELMQS-DLHKII---VSPQPLSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd06622    42 KFNQIIMELDILHkavSPYIvdfygAFFIEgaVYMCMEYMDAgSLDKLYaggVATEGIPEDVLRRITYAVVKGLKFLKEE 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 -GILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQeVVTQYYRAPEIL-----MGSRHYSNAIDIWSVGCIFA 180
Cdd:cd06622   122 hNIIHRDVKPTNVLVNGNGQVKLCDFGVS--GNLVASLAKTN-IGCQSYMAPERIksggpNQNPTYTVQSDVWSLGLSIL 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 181 ELLGRRILFQAQSP---IQQLDLITDllGTPsleamrtacegakahilrgphkqPSLPvlytlsSQATHEAVHLLCRMLV 257
Cdd:cd06622   199 EMALGRYPYPPETYaniFAQLSAIVD--GDP-----------------------PTLP------SGYSDDAQDFVAKCLN 247
                         250
                  ....*....|....*...
gi 1907080392 258 FDPSKRISAKDALAHPYL 275
Cdd:cd06622   248 KIPNRRPTYAQLLEHPWL 265
STKc_SNT7_plant cd14013
Catalytic domain of the Serine/Threonine kinase, Plant SNT7; STKs catalyze the transfer of the ...
89-275 6.13e-12

Catalytic domain of the Serine/Threonine kinase, Plant SNT7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SNT7 is a plant thylakoid-associated kinase that is essential in short- and long-term acclimation responses to cope with various light conditions in order to maintain photosynthetic redox poise for optimal photosynthetic performance. Short-term response involves state transitions over periods of minutes while the long-term response (LTR) occurs over hours to days and involves changing the relative amounts of photosystems I and II. SNT7 acts as a redox sensor and a signal transducer for both responses, which are triggered by the redox state of the plastoquinone (PQ) pool. It is positioned at the top of a phosphorylation cascade that induces state transitions by phosphorylating light-harvesting complex II (LHCII), and triggers the LTR through the phosphorylation of chloroplast proteins. The SNT7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270915 [Multi-domain]  Cd Length: 318  Bit Score: 65.92  E-value: 6.13e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKICDFGLA---RV-------EELDESRHMTQE---VVTQYY 154
Cdd:cd14013   122 IKSIMRQILVALRKLHSTGIVHRDVKPQNIIVSeGDGQFKIIDLGAAadlRIginyipkEFLLDPRYAPPEqyiMSTQTP 201
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 155 RAPEI-----------LMGSrhySNAIDIWSVGCIFAELL-------GRRILFQAQspIQQLDLitdllgtpSLEAMRTA 216
Cdd:cd14013   202 SAPPApvaaalspvlwQMNL---PDRFDMYSAGVILLQMAfpnlrsdSNLIAFNRQ--LKQCDY--------DLNAWRML 268
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 217 CEGAKAHILRgphkqPSLPVLyTLSSQATHEavhLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14013   269 VEPRASADLR-----EGFEIL-DLDDGAGWD---LVTKLIRYKPRGRLSASAALAHPYF 318
STKc_MST4 cd06640
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs ...
83-182 6.29e-12

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132971 [Multi-domain]  Cd Length: 277  Bit Score: 65.46  E-value: 6.29e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQYYRAPEILM 161
Cdd:cd06640    97 PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVgTPFWMAPEVIQ 174
                          90       100
                  ....*....|....*....|.
gi 1907080392 162 GSRHYSNAiDIWSVGCIFAEL 182
Cdd:cd06640   175 QSAYDSKA-DIWSLGITAIEL 194
PK_SCY1_like cd14011
Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein ...
61-277 6.39e-12

Pseudokinase domain of Scy1-like proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This subfamily is composed of the catalytically inactive kinases with similarity to yeast Scy1. It includes four mammalian proteins called SCY1-like protein 1 (SCYL1), SCYL2, SCYL3, as well as Testis-EXpressed protein 14 (TEX14). SCYL1 binds to and co-localizes with the membrane trafficking coatomer I (COPI) complex, and regulates COPI-mediated vesicle trafficking. Null mutations in the SCYL1 gene are responsible for the pathology in mdf (muscle-deficient) mice which display progressive motor neuropathy. SCYL2, also called coated vesicle-associated kinase of 104 kDa (CVAK104), is involved in the trafficking of clathrin-coated vesicles. It also binds the HIV-1 accessory protein Vpu and acts as a regulatory factor that promotes the dephosphorylation of Vpu, facilitating the restriction of HIV-1 release. SCYL3, also called ezrin-binding protein PACE-1, may be involved in regulating cell adhesion and migration. TEX14 is required for spermatogenesis and male fertility. It localizes to kinetochores (KT) during mitosis and is a target of the mitotic kinase PLK1. It regulates the maturation of the outer KT and the KT-microtubule attachment. The SCY1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270913 [Multi-domain]  Cd Length: 287  Bit Score: 65.42  E-value: 6.39e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQSDL------HKIIVSPQPLSSDH------VKVFLYQILRGLKYLH-SAGILHRDIKPGNLLVNSNCVLK 127
Cdd:cd14011    76 ESLAFATEPVFASLanvlgeRDNMPSPPPELQDYklydveIKYGLLQISEALSFLHnDVKLVHGNICPESVVINSNGEWK 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 128 ICDFGLA-----------RVEELDESRHmtqeVVTQY---YRAPEILMGSRHySNAIDIWSVGCIFAEllgrriLFQAQS 193
Cdd:cd14011   156 LAGFDFCisseqatdqfpYFREYDPNLP----PLAQPnlnYLAPEYILSKTC-DPASDMFSLGVLIYA------IYNKGK 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 194 PIQQLDLITDllgtpsleamrtaceGAKAHIlrGPHKQPSLPVLYTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd14011   225 PLFDCVNNLL---------------SYKKNS--NQLRQLSLSLLEKVPE----ELRDHVKTLLNVTPEVRPDAEQLSKIP 283

                  ....
gi 1907080392 274 YLDE 277
Cdd:cd14011   284 FFDD 287
STKc_TGFbR-like cd13998
Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; ...
98-266 7.93e-12

Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. There are two types of TGFbeta receptors included in this subfamily, I and II, that play different roles in signaling. For signaling to occur, the ligand first binds to the high-affinity type II receptor, which is followed by the recruitment of the low-affinity type I receptor to the complex and its activation through trans-phosphorylation by the type II receptor. The active type I receptor kinase starts intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. Different ligands interact with various combinations of types I and II receptors to elicit a specific signaling pathway. Activins primarily signal through combinations of ACVR1b/ALK7 and ACVR2a/b; myostatin and GDF11 through TGFbR1/ALK4 and ACVR2a/b; BMPs through ACVR1/ALK1 and BMPR2; and TGFbeta through TGFbR1 and TGFbR2. The TGFbR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270900 [Multi-domain]  Cd Length: 289  Bit Score: 65.15  E-value: 7.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  98 RGLKYLHS---------AGILHRDIKPGNLLVNSNCVLKICDFGLA-RVE----ELDESRHmtQEVVTQYYRAPEILMGS 163
Cdd:cd13998   103 RGLAHLHSeipgctqgkPAIAHRDLKSKNILVKNDGTCCIADFGLAvRLSpstgEEDNANN--GQVGTKRYMAPEVLEGA 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 164 RHYSNA-----IDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKahiLRgphkqPSLPvly 238
Cdd:cd13998   181 INLRDFesfkrVDIYAMGLVLWEMASRCTDLFGIVEEYKPPFYSEVPNHPSFEDMQEVVVRDK---QR-----PNIP--- 249
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907080392 239 tlSSQATHEAVHLLCRMLV----FDPSKRISA 266
Cdd:cd13998   250 --NRWLSHPGLQSLAETIEecwdHDAEARLTA 279
PTKc_Jak3_rpt2 cd05081
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the ...
87-183 7.94e-12

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak3 is expressed only in hematopoietic cells. It binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Jak3 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270665 [Multi-domain]  Cd Length: 283  Bit Score: 65.30  E-value: 7.94e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKVFLY--QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQ--YYRAPEILMG 162
Cdd:cd05081   106 DASRLLLYssQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSpiFWYAPESLSD 185
                          90       100
                  ....*....|....*....|.
gi 1907080392 163 SRhYSNAIDIWSVGCIFAELL 183
Cdd:cd05081   186 NI-FSRQSDVWSFGVVLYELF 205
PKc_MKK7 cd06618
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
9-182 8.27e-12

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 7; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270791 [Multi-domain]  Cd Length: 295  Bit Score: 65.09  E-value: 8.27e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNVfQNLVSCKRVFRELKMLCFfKHDNvlsaldilqpPHI----DYF---EEIYVVTELMQSDLHKI-IVS 80
Cdd:cd06618    40 GHVMAVKQMRRS-GNKEENKRILMDLDVVLK-SHDC----------PYIvkcyGYFitdSDVFICMELMSTCLDKLlKRI 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEI 159
Cdd:cd06618   108 QGPIPEDILGKMTVSIVKALHYLKEKhGVIHRDVKPSNILLDESGNVKLCDFGIS--GRLVDSKAKTRSAGCAAYMAPER 185
                         170       180
                  ....*....|....*....|....*
gi 1907080392 160 LMGSRH--YSNAIDIWSVGCIFAEL 182
Cdd:cd06618   186 IDPPDNpkYDIRADVWSLGISLVEL 210
STKc_CaMK_like cd14088
Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to ...
24-275 8.96e-12

Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to Calcium/calmodulin-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized STKs with similarity to CaMKs, which are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. This uncharacterized subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270990 [Multi-domain]  Cd Length: 265  Bit Score: 64.66  E-value: 8.96e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  24 LVSCKRVFR------------ELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHVK 90
Cdd:cd14088    28 LYTCKKFLKrdgrkvrkaaknEINILKMVKHPNILQLVDVFETR-----KEYFIFLELATGrEVFDWILDQGYYSERDTS 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNL-----LVNSNCVlkICDFGLARVeeldESRHMTQEVVTQYYRAPEILmGSRH 165
Cdd:cd14088   103 NVIRQVLEAVAYLHSLKIVHRNLKLENLvyynrLKNSKIV--ISDFHLAKL----ENGLIKEPCGTPEYLAPEVV-GRQR 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 166 YSNAIDIWSVGCIFaellgrRILFQAQSPIQQlDLITDLLGTPSLEAMRTacegakahILRGPHKQPSlPVLYTLSSQAT 245
Cdd:cd14088   176 YGRPVDCWAIGVIM------YILLSGNPPFYD-EAEEDDYENHDKNLFRK--------ILAGDYEFDS-PYWDDISQAAK 239
                         250       260       270
                  ....*....|....*....|....*....|
gi 1907080392 246 heavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14088   240 ----DLVTRLMEVEQDQRITAEEAISHEWI 265
STKc_MLCK4 cd14193
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze ...
76-275 1.03e-11

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. MLCK4 (or MYLK4 or SgK085) contains a single kinase domain near the C-terminus. The MLCK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271095 [Multi-domain]  Cd Length: 261  Bit Score: 64.55  E-value: 1.03e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  76 KIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLvnsnCV------LKICDFGLARveeldesRHMTQEV 149
Cdd:cd14193    91 RIIDENYNLTELDTILFIKQICEGIQYMHQMYILHLDLKPENIL----CVsreanqVKIIDFGLAR-------RYKPREK 159
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 150 VTQYYRAPEIL----MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITdllgtpsleAMRTACEGAKAhil 225
Cdd:cd14193   160 LRVNFGTPEFLapevVNYEFVSFPTDMWSLGVIAYMLLSGLSPFLGEDDNETLNNIL---------ACQWDFEDEEF--- 227
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1907080392 226 rgphkqpslpvlytlsSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14193   228 ----------------ADISEEAKDFISKLLIKEKSWRMSASEALKHPWL 261
STKc_MAP4K5 cd06646
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
83-182 1.23e-11

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270813 [Multi-domain]  Cd Length: 268  Bit Score: 64.28  E-value: 1.23e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGL-ARVEELDESRhmTQEVVTQYYRAPEILM 161
Cdd:cd06646   102 PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVaAKITATIAKR--KSFIGTPYWMAPEVAA 179
                          90       100
                  ....*....|....*....|...
gi 1907080392 162 GSRH--YSNAIDIWSVGCIFAEL 182
Cdd:cd06646   180 VEKNggYNQLCDIWAVGITAIEL 202
PTKc_Lyn cd05072
Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the ...
61-183 1.25e-11

Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lyn subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270657 [Multi-domain]  Cd Length: 272  Bit Score: 64.29  E-value: 1.25e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELM---------QSDLHKIIVSPQPLSsdhvkvFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDF 131
Cdd:cd05072    75 EPIYIITEYMakgslldflKSDEGGKVLLPKLID------FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF 148
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 132 GLARVEELDESRHMTQEVVTQYYRAPE-ILMGSrhYSNAIDIWSVGCIFAELL 183
Cdd:cd05072   149 GLARVIEDNEYTAREGAKFPIKWTAPEaINFGS--FTIKSDVWSFGILLYEIV 199
STKc_LIMK2 cd14222
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the ...
20-185 1.28e-11

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK2 activation is induced by transforming growth factor-beta l (TGFb-l) and shares the same subcellular location as the cofilin family member twinfilin, which may be its biological substrate. LIMK2 plays a role in spermatogenesis, and may contribute to tumor progression and metastasis formation in some cancer cells. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271124 [Multi-domain]  Cd Length: 272  Bit Score: 64.58  E-value: 1.28e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  20 VFQNLVSC-----KRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFL 93
Cdd:cd14222    22 VMKELIRCdeetqKTFLTEVKVMRSLDHPNVLKFIGVLYKD-----KRLNLLTEFIEgGTLKDFLRADDPFPWQQKVSFA 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 YQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEE------------------LDESRHMTQeVVTQY 153
Cdd:cd14222    97 KGIASGMAYLHSMSIIHRDLNSHNCLIKLDKTVVVADFGLSRliVEEkkkpppdkpttkkrtlrkNDRKKRYTV-VGNPY 175
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907080392 154 YRAPEILMGSRhYSNAIDIWSVGCIFAELLGR 185
Cdd:cd14222   176 WMAPEMLNGKS-YDEKVDIFSFGIVLCEIIGQ 206
STKc_NIK cd13991
Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs ...
84-183 1.39e-11

Catalytic domain of the Serine/Threonine kinase, NF-kappaB Inducing Kinase (NIK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIK, also called mitogen activated protein kinase kinase kinase 14 (MAP3K14), phosphorylates and activates Inhibitor of NF-KappaB Kinase (IKK) alpha, which is a regulator of NF-kB proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. NIK is essential in the IKKalpha-mediated non-canonical NF-kB signaling pathway, in which IKKalpha processes the IkB-like C-terminus of NF-kB2/p100 to produce p52, allowing the p52/RelB dimer to migrate to the nucleus where it regulates gene transcription. NIK also plays an important role in Toll-like receptor 7/9 signaling cascades. The NIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270893 [Multi-domain]  Cd Length: 268  Bit Score: 64.07  E-value: 1.39e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV-LKICDFGLArvEELDES----RHMTQEVV--TQYYRA 156
Cdd:cd13991    95 LPEDRALHYLGQALEGLEYLHSRKILHGDVKADNVLLSSDGSdAFLCDFGHA--ECLDPDglgkSLFTGDYIpgTETHMA 172
                          90       100
                  ....*....|....*....|....*..
gi 1907080392 157 PEILMGSRHYSNAiDIWSVGCIFAELL 183
Cdd:cd13991   173 PEVVLGKPCDAKV-DVWSSCCMMLHML 198
PTKc_Src_Fyn_like cd14203
Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
11-185 1.60e-11

Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes a subset of Src-like PTKs including Src, Fyn, Yrk, and Yes, which are all widely expressed. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. They are also implicated in acute inflammatory responses and osteoclast function. The Src/Fyn-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271105 [Multi-domain]  Cd Length: 248  Bit Score: 63.78  E-value: 1.60e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  11 RVALKKMPnvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPphidyfEEIYVVTELM-QSDLHKIIVSP--QPLSSD 87
Cdd:cd14203    21 KVAIKTLK---PGTMSPEAFLEEAQIMKKLRHDKLVQLYAVVSE------EPIYIVTEFMsKGSLLDFLKDGegKYLKLP 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRhYS 167
Cdd:cd14203    92 QLVDMAAQIASGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FT 170
                         170       180
                  ....*....|....*....|
gi 1907080392 168 NAIDIWSVGCIFAELL--GR 185
Cdd:cd14203   171 IKSDVWSFGILLTELVtkGR 190
STKc_PRKX_like cd05612
Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of ...
3-183 1.67e-11

Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PRKX-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270763 [Multi-domain]  Cd Length: 292  Bit Score: 64.38  E-value: 1.67e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKM--PNVF-----QNLVSCKRVFRELKmlcffkHDNVLSaldILQPPHIDYFeeIYVVTELMQS-DL 74
Cdd:cd05612    20 VRDRISEHYYALKVMaiPEVIrlkqeQHVHNEKRVLKEVS------HPFIIR---LFWTEHDQRF--LYMLMEYVPGgEL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  75 HKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQevvTQYY 154
Cdd:cd05612    89 FSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAK-KLRDRTWTLCG---TPEY 164
                         170       180
                  ....*....|....*....|....*....
gi 1907080392 155 RAPEILmGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05612   165 LAPEVI-QSKGHNKAVDWWALGILIYEML 192
PTZ00267 PTZ00267
NIMA-related protein kinase; Provisional
83-183 1.71e-11

NIMA-related protein kinase; Provisional


Pssm-ID: 140293 [Multi-domain]  Cd Length: 478  Bit Score: 65.42  E-value: 1.71e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-TQYYRAPEILM 161
Cdd:PTZ00267  165 PFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCgTPYYLAPELWE 244
                          90       100
                  ....*....|....*....|..
gi 1907080392 162 GSRhYSNAIDIWSVGCIFAELL 183
Cdd:PTZ00267  245 RKR-YSKKADMWSLGVILYELL 265
PTKc_Jak1_rpt2 cd05079
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the ...
95-183 1.87e-11

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Jak1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173644 [Multi-domain]  Cd Length: 284  Bit Score: 64.18  E-value: 1.87e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQ--YYRAPEILMGSRHYSnAIDI 172
Cdd:cd05079   117 QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSpvFWYAPECLIQSKFYI-ASDV 195
                          90
                  ....*....|.
gi 1907080392 173 WSVGCIFAELL 183
Cdd:cd05079   196 WSFGVTLYELL 206
STKc_LRRK2 cd14068
Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2; STKs catalyze ...
9-187 1.92e-11

Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRK2 is one of two vertebrate LRRKs which show complementary expression in the brain. Mutations in LRRK2, found in the kinase, ROC-COR, and WD40 domains, are linked to both familial and sporadic forms of Parkinson's disease. The most prevalent mutation, G2019S located in the activation loop of the kinase domain, increases kinase activity. The R1441C/G mutations in the GTPase domain have also been reported to influence kinase activity. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. The LRRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270970 [Multi-domain]  Cd Length: 252  Bit Score: 63.43  E-value: 1.92e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKkmpnVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFE--EIYVVTELMQSDLHKIIVSPQPLSS 86
Cdd:cd14068    17 GEDVAVK----IFNKHTSFRLLRQELVVLSHLHHPSLVALLAAGTAPRMLVMElaPKGSLDALLQQDNASLTRTLQHRIA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  87 DHVKvflyqilRGLKYLHSAGILHRDIKPGNLLV-----NSNCVLKICDFGLArveELDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd14068    93 LHVA-------DGLRYLHSAMIIYRDLKPHNVLLftlypNCAIIAKIADYGIA---QYCCRMGIKTSEGTPGFRAPEVAR 162
                         170       180
                  ....*....|....*....|....*...
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELL--GRRI 187
Cdd:cd14068   163 GNVIYNQQADVYSFGLLLYDILtcGERI 190
STKc_MLCK3 cd14192
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze ...
44-275 2.18e-11

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK3 (or MYLK3) phosphorylates myosin regulatory light chain 2 and controls the contraction of cardiac muscles. It is expressed specifically in both the atrium and ventricle of the heart and its expression is regulated by the cardiac protein Nkx2-5. MLCK3 plays an important role in cardiogenesis by regulating the assembly of cardiac sarcomeres, the repeating contractile unit of striated muscle. MLCK3 contains a single kinase domain near the C-terminus and a unique N-terminal half, and unlike MLCK1/2, it does not appear to be regulated by Ca2+/calmodulin. The MLCK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271094 [Multi-domain]  Cd Length: 261  Bit Score: 63.44  E-value: 2.18e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  44 NVLSALDILQppHIDYFEEIYVVTELMQ-----SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNL 118
Cdd:cd14192    56 NQLNHVNLIQ--LYDAFESKTNLTLIMEyvdggELFDRITDESYQLTELDAILFTRQICEGVHYLHQHYILHLDLKPENI 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 119 L-VNSNC-VLKICDFGLARveeldesRHMTQEVVTQYYRAPEIL----MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQ 192
Cdd:cd14192   134 LcVNSTGnQIKIIDFGLAR-------RYKPREKLKVNFGTPEFLapevVNYDFVSFPTDMWSVGVITYMLLSGLSPFLGE 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 193 SPIQQLDLITDLLGTPSLEAMRtacegakahilrgphkqpslpvlytlssQATHEAVHLLCRMLVFDPSKRISAKDALAH 272
Cdd:cd14192   207 TDAETMNNIVNCKWDFDAEAFE----------------------------NLSEEAKDFISRLLVKEKSCRMSATQCLKH 258

                  ...
gi 1907080392 273 PYL 275
Cdd:cd14192   259 EWL 261
PKc_LIMK_like_unk cd14156
Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs ...
3-185 2.54e-11

Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This group is composed of uncharacterized proteins with similarity to LIMK and Testicular or testis-specific protein kinase (TESK). LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271058 [Multi-domain]  Cd Length: 256  Bit Score: 63.31  E-value: 2.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKkmpnVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKIIVSPQ 82
Cdd:cd14156    12 VTHGATGKVMVVK----IYKNDVDQHKIVREISLLQKLSHPNIVRYLGICVKD-----EKLHPILEYVSGGCLEELLARE 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLS-SDHVKVFLY-QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK---ICDFGLAR-VEEL---DESRHMTQeVVTQY 153
Cdd:cd14156    83 ELPlSWREKVELAcDISRGMVYLHSKNIYHRDLNSKNCLIRVTPRGReavVTDFGLAReVGEMpanDPERKLSL-VGSAF 161
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907080392 154 YRAPEILMGsRHYSNAIDIWSVGCIFAELLGR 185
Cdd:cd14156   162 WMAPEMLRG-EPYDRKVDVFSFGIVLCEILAR 192
STKc_ROCK2 cd05621
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
63-203 2.64e-11

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270771 [Multi-domain]  Cd Length: 379  Bit Score: 64.25  E-value: 2.64e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDES 142
Cdd:cd05621   127 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKYGHLKLADFGTCM--KMDET 204
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392 143 R--HMTQEVVTQYYRAPEILM---GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITD 203
Cdd:cd05621   205 GmvHCDTAVGTPDYISPEVLKsqgGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 270
PTKc_VEGFR3 cd05102
Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3; ...
83-183 2.86e-11

Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. VEGFR3 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270680 [Multi-domain]  Cd Length: 336  Bit Score: 63.85  E-value: 2.86e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQEVVTQYYrAPEIL 160
Cdd:cd05102   168 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARdiYKDPDYVRKGSARLPLKWM-APESI 246
                          90       100
                  ....*....|....*....|...
gi 1907080392 161 MgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05102   247 F-DKVYTTQSDVWSFGVLLWEIF 268
STKc_TBK1 cd13988
Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the ...
84-179 3.20e-11

Catalytic domain of the Serine/Threonine kinase, TANK Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TBK1 is also called T2K and NF-kB-activating kinase. It is widely expressed in most cell types and acts as an IkappaB kinase (IKK)-activating kinase responsible for NF-kB activation in response to growth factors. It plays a role in modulating inflammatory responses through the NF-kB pathway. TKB1 is also a major player in innate immune responses since it functions as a virus-activated kinase necessary for establishing an antiviral state. It phosphorylates IRF-3 and IRF-7, which are important transcription factors for inducing type I interferon during viral infection. In addition, TBK1 may also play roles in cell transformation and oncogenesis. The TBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270890 [Multi-domain]  Cd Length: 316  Bit Score: 63.66  E-value: 3.20e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV----NSNCVLKICDFGLARveELDESRHMTQEVVTQYYRAPEI 159
Cdd:cd13988    93 LPESEFLIVLRDVVAGMNHLRENGIVHRDIKPGNIMRvigeDGQSVYKLTDFGAAR--ELEDDEQFVSLYGTEEYLHPDM 170
                          90       100
                  ....*....|....*....|....*..
gi 1907080392 160 LMGS-------RHYSNAIDIWSVGCIF 179
Cdd:cd13988   171 YERAvlrkdhqKKYGATVDLWSIGVTF 197
STKc_PIM3 cd14102
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
45-200 3.63e-11

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3). PIM3 can inhibit apoptosis and promote cell survival and protein translation, therefore, it can enhance the proliferation of normal and cancer cells. Mice deficient with PIM3 show minimal effects, suggesting that PIM3 msy not be essential. Since its expression is enhanced in several cancers, it may make a good molecular target for cancer drugs. The PIM3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271004 [Multi-domain]  Cd Length: 253  Bit Score: 62.67  E-value: 3.63e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  45 VLSALDILQPPhiDYFEEIYVVTELMQsDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SN 123
Cdd:cd14102    66 VIKLLDWYERP--DGFLIVMERPEPVK-DLFDFITEKGALDEDTARGFFRQVLEAVRHCYSCGVVHRDIKDENLLVDlRT 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 124 CVLKICDFGlarveeldeSRHMTQEVV------TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQ 197
Cdd:cd14102   143 GELKLIDFG---------SGALLKDTVytdfdgTRVYSPPEWIRYHRYHGRSATVWSLGVLLYDMVCGDIPFEQDEEILR 213

                  ...
gi 1907080392 198 LDL 200
Cdd:cd14102   214 GRL 216
STKc_SGK3 cd05604
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
81-183 4.08e-11

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK3 (also called cytokine-independent survival kinase or CISK) is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. The SGK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270755 [Multi-domain]  Cd Length: 326  Bit Score: 63.44  E-value: 4.08e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 PQPlssdHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEIL 160
Cdd:cd05604    95 PEP----RARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHIVLTDFGLCK-EGISNSDTTTTFCGTPEYLAPEVI 169
                          90       100
                  ....*....|....*....|...
gi 1907080392 161 MgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05604   170 R-KQPYDNTVDWWCLGSVLYEML 191
PTKc_Tec_Rlk cd05114
Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular ...
63-202 4.41e-11

Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec-like subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. The Tec/Rlk subfamily is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270685 [Multi-domain]  Cd Length: 260  Bit Score: 62.57  E-value: 4.41e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSD--LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELD 140
Cdd:cd05114    74 IYIVTEFMENGclLNYLRQRRGKLSRDMLLSMCQDVCEGMEYLERNNFIHRDLAARNCLVNDTGVVKVSDFGMTRYVLDD 153
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 141 ESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGR-RILFQAQSPIQQLDLIT 202
Cdd:cd05114   154 QYTSSSGAKFPVKWSPPEVFNYSK-FSSKSDVWSFGVLMWEVFTEgKMPFESKSNYEVVEMVS 215
STKc_MAP4K3 cd06645
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
83-182 4.81e-11

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. MAP4Ks are involved in MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270812 [Multi-domain]  Cd Length: 272  Bit Score: 62.76  E-value: 4.81e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGL-ARVEELDESRhmTQEVVTQYYRAPEILM 161
Cdd:cd06645   104 PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVsAQITATIAKR--KSFIGTPYWMAPEVAA 181
                          90       100
                  ....*....|....*....|...
gi 1907080392 162 GSRH--YSNAIDIWSVGCIFAEL 182
Cdd:cd06645   182 VERKggYNQLCDIWAVGITAIEL 204
STKc_PIM1 cd14100
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
45-195 4.99e-11

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 isoforms resulting from alternative translation initiation sites. PIM1 is the founding member of the PIM subfamily. It is involved in regulating cell growth, differentiation, and apoptosis. It promotes cancer development when overexpressed by inhibiting apoptosis, promoting cell proliferation, and promoting genomic instability. The PIM1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271002 [Multi-domain]  Cd Length: 254  Bit Score: 62.29  E-value: 4.99e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  45 VLSALDILQPPhiDYFEEIYVVTELMQsDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC 124
Cdd:cd14100    67 VIRLLDWFERP--DSFVLVLERPEPVQ-DLFDFITERGALPEELARSFFRQVLEAVRHCHNCGVLHRDIKDENILIDLNT 143
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 125 -VLKICDFGlarveeldeSRHMTQEVV------TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPI 195
Cdd:cd14100   144 gELKLIDFG---------SGALLKDTVytdfdgTRVYSPPEWIRFHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 212
PTKc_Src cd05071
Catalytic domain of the Protein Tyrosine Kinase, Src; PTKs catalyze the transfer of the ...
61-182 5.90e-11

Catalytic domain of the Protein Tyrosine Kinase, Src; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) PTK, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. The Src subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270656 [Multi-domain]  Cd Length: 277  Bit Score: 62.40  E-value: 5.90e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELM---------QSDLHKIIVSPQPLSsdhvkvFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDF 131
Cdd:cd05071    76 EPIYIVTEYMskgslldflKGEMGKYLRLPQLVD------MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 149
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 132 GLARVEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAEL 182
Cdd:cd05071   150 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 199
PTKc_EGFR_like cd05057
Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases; PTKs ...
25-186 6.30e-11

Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. The EGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270648 [Multi-domain]  Cd Length: 279  Bit Score: 62.43  E-value: 6.30e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  25 VSCKRVFRELKMLCFFKHDNVLSALDILQPphidyfEEIYVVTELMqsdlhkiivspqPLSS--DHVK------------ 90
Cdd:cd05057    51 KANEEILDEAYVMASVDHPHLVRLLGICLS------SQVQLITQLM------------PLGCllDYVRnhrdnigsqlll 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESR-HMTQEVVTQYYRAPEILMgSRHYSNA 169
Cdd:cd05057   113 NWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPNHVKITDFGLAKLLDVDEKEyHAEGGKVPIKWMALESIQ-YRIYTHK 191
                         170
                  ....*....|....*....
gi 1907080392 170 IDIWSVGCIFAELL--GRR 186
Cdd:cd05057   192 SDVWSYGVTVWELMtfGAK 210
PTKc_Fes cd05084
Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the ...
29-185 6.77e-11

Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes (or Fps) is a cytoplasmic (or nonreceptor) PTK containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated PTK activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. The Fes subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270667 [Multi-domain]  Cd Length: 252  Bit Score: 61.87  E-value: 6.77e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKMLCFFKHDNVLSALDILQPPHidyfeEIYVVTELMQS-DLHKIIVSPQP-LSSDHVKVFLYQILRGLKYLHSA 106
Cdd:cd05084    40 KFLQEARILKQYSHPNIVRLIGVCTQKQ-----PIYIVMELVQGgDFLTFLRTEGPrLKVKELIRMVENAAAGMEYLESK 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 107 GILHRDIKPGNLLVNSNCVLKICDFGLARVEE---LDESRHMTQEVVTqyYRAPEILMGSRhYSNAIDIWSVGCIFAELL 183
Cdd:cd05084   115 HCIHRDLAARNCLVTEKNVLKISDFGMSREEEdgvYAATGGMKQIPVK--WTAPEALNYGR-YSSESDVWSFGILLWETF 191

                  ..
gi 1907080392 184 GR 185
Cdd:cd05084   192 SL 193
STKc_PDIK1L cd13977
Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs ...
73-266 6.92e-11

Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDIK1L is also called STK35 or CLIK-1. It is predominantly a nuclear protein which is capable of autophosphorylation. Through its interaction with the PDZ-LIM protein CLP-36, it is localized to actin stress fibers. The PDIK1L subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270879 [Multi-domain]  Cd Length: 322  Bit Score: 62.57  E-value: 6.92e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  73 DLHKIIVSPQPlSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC---VLKICDFGLARV---------EELD 140
Cdd:cd13977   121 DMNEYLLSRRP-DRQTNTSFMLQLSSALAFLHRNQIVHRDLKPDNILISHKRgepILKVADFGLSKVcsgsglnpeEPAN 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 141 ESRH-MTQEVVTQYYRAPEILMGsrHYSNAIDIWSVGCIFAELLgRRILFqaqspiQQLDLITDLLGTpsleamrTACEG 219
Cdd:cd13977   200 VNKHfLSSACGSDFYMAPEVWEG--HYTAKADIFALGIIIWAMV-ERITF------RDGETKKELLGT-------YIQQG 263
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1907080392 220 AK-----AHILRGPHKQPSLPVLYTLSSQATHEavHLLCRMLVFDPSKRISA 266
Cdd:cd13977   264 KEivplgEALLENPKLELQIPLKKKKSMNDDMK--QLLRDMLAANPQERPDA 313
STKc_Aurora-B_like cd14117
Catalytic domain of the Serine/Threonine kinase, Aurora-B kinase and similar proteins; STKs ...
32-275 7.83e-11

Catalytic domain of the Serine/Threonine kinase, Aurora-B kinase and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). This subfamily includes Aurora-B and Aurora-C. Aurora-B is most active at the transition during metaphase to the end of mitosis. It associates with centromeres, relocates to the midzone of the central spindle, and concentrates at the midbody during cell division. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. INCENP participates in the activation of Aurora-B in a two-step process: first by binding to form an intermediate state of activation and the phosphorylation of its C-terminal TSS motif to generate the fully active kinase. The Aurora-B subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271019 [Multi-domain]  Cd Length: 270  Bit Score: 62.19  E-value: 7.83e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDilqpphidYFEE---IYVVTELM-QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 107
Cdd:cd14117    55 REIEIQSHLRHPNILRLYN--------YFHDrkrIYLILEYApRGELYKELQKHGRFDEQRTATFMEELADALHYCHEKK 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 108 ILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQevvTQYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRI 187
Cdd:cd14117   127 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCG---TLDYLPPEMIEG-RTHDEKVDLWCIGVLCYELLVGMP 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 188 LFQAQSPIQQLDLIT--DLLGTPSLEamrtacEGAKahilrgphkqpslpvlytlssqatheavHLLCRMLVFDPSKRIS 265
Cdd:cd14117   203 PFESASHTETYRRIVkvDLKFPPFLS------DGSR----------------------------DLISKLLRYHPSERLP 248
                         250
                  ....*....|
gi 1907080392 266 AKDALAHPYL 275
Cdd:cd14117   249 LKGVMEHPWV 258
PTKc_Hck cd05073
Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the ...
11-183 8.04e-11

Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of G-CSF-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes. Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Hck subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270658 [Multi-domain]  Cd Length: 265  Bit Score: 61.97  E-value: 8.04e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  11 RVALKKMPnvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPphidyfEEIYVVTELMQS-DLHKIIVSPQPLSSDHV 89
Cdd:cd05073    37 KVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIYIITEFMAKgSLLDFLKSDEGSKQPLP 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  90 KV--FLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPE-ILMGSrhY 166
Cdd:cd05073   108 KLidFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEaINFGS--F 185
                         170
                  ....*....|....*..
gi 1907080392 167 SNAIDIWSVGCIFAELL 183
Cdd:cd05073   186 TIKSDVWSFGILLMEIV 202
PTKc_VEGFR cd05054
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
82-182 8.41e-11

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. VEGFR subfamily members are receptor PTKss (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. The VEGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270647 [Multi-domain]  Cd Length: 298  Bit Score: 62.12  E-value: 8.41e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR--VEELDESRHMTQEVVTQYYrAPEI 159
Cdd:cd05054   133 EPLTLEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARdiYKDPDYVRKGDARLPLKWM-APES 211
                          90       100
                  ....*....|....*....|...
gi 1907080392 160 LMgSRHYSNAIDIWSVGCIFAEL 182
Cdd:cd05054   212 IF-DKVYTTQSDVWSFGVLLWEI 233
STKc_Nek7 cd08229
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
8-182 8.76e-11

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270866 [Multi-domain]  Cd Length: 292  Bit Score: 61.97  E-value: 8.76e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKKMpNVFQNLVSCKR--VFRELKMLCFFKHDNVLSAldilqppHIDYFE--EIYVVTELMQS-DLHKII---- 78
Cdd:cd08229    48 DGVPVALKKV-QIFDLMDAKARadCIKEIDLLKQLNHPNVIKY-------YASFIEdnELNIVLELADAgDLSRMIkhfk 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEElDESRHMTQEVVTQYYRAPE 158
Cdd:cd08229   120 KQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPE 198
                         170       180
                  ....*....|....*....|....
gi 1907080392 159 ILMgSRHYSNAIDIWSVGCIFAEL 182
Cdd:cd08229   199 RIH-ENGYNFKSDIWSLGCLLYEM 221
STKc_GRK3 cd05633
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs ...
61-197 8.88e-11

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK3, also called beta-adrenergic receptor kinase 2 (beta-ARK2), is widely expressed in many tissues. It is involved in modulating the cholinergic response of airway smooth muscles, and also plays a role in dopamine receptor regulation. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 promoter polymorphisms may also be associated with bipolar disorder. GRK3 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270781 [Multi-domain]  Cd Length: 346  Bit Score: 62.77  E-value: 8.88e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArveeL 139
Cdd:cd05633    81 DKLCFILDLMNGgDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C 156
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 140 DESRHMTQEVV-TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQ 197
Cdd:cd05633   157 DFSKKKPHASVgTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLL------RGHSPFRQ 209
STKc_phototropin_like cd05574
Catalytic domain of Phototropin-like Serine/Threonine Kinases; STKs catalyze the transfer of ...
82-267 9.54e-11

Catalytic domain of Phototropin-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. In addition to plant phototropins, included in this subfamily are predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2, which plays a role in growth and development by controlling entry into the conidiation program. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270726 [Multi-domain]  Cd Length: 316  Bit Score: 62.25  E-value: 9.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QP---LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA----------RVEELDESRHMTQE 148
Cdd:cd05574    95 QPgkrLPEEVARFYAAEVLLALEYLHLLGFVYRDLKPENILLHESGHIMLTDFDLSkqssvtpppvRKSLRKGSRRSSVK 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 149 ------------------VVTQYYRAPEILMGSRHySNAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgtpsl 210
Cdd:cd05574   175 sieketfvaepsarsnsfVGTEEYIAPEVIKGDGH-GSAVDWWTLGILLYEMLYGTTPFKGSNRDETF------------ 241
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 211 eamrtacegakAHILrgpHKQPSLPVLYTLSSQATheavHLLCRMLVFDPSKRISAK 267
Cdd:cd05574   242 -----------SNIL---KKELTFPESPPVSSEAK----DLIRKLLVKDPSKRLGSK 280
STKc_TGFbR_I cd14056
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type ...
92-185 9.57e-11

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type I Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of type I receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation through trans-phosphorylation by type II receptors, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. They are inhibited by the immunophilin FKBP12, which is thought to control leaky signaling caused by receptor oligomerization in the absence of ligand. The TGFbR-I subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270958 [Multi-domain]  Cd Length: 287  Bit Score: 61.90  E-value: 9.57e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  92 FLYQILRGLKYLHSA--------GILHRDIKPGNLLVNSNCVLKICDFGLA-----RVEELDESRHmtQEVVTQYYRAPE 158
Cdd:cd14056    97 LAYSAASGLAHLHTEivgtqgkpAIAHRDLKSKNILVKRDGTCCIADLGLAvrydsDTNTIDIPPN--PRVGTKRYMAPE 174
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1907080392 159 ILMGSRHYSN-----AIDIWSVGCIFAELLGR 185
Cdd:cd14056   175 VLDDSINPKSfesfkMADIYSFGLVLWEIARR 206
STKc_KSR1 cd14152
Catalytic domain of the Serine/Threonine Kinase, Kinase Suppressor of Ras 1; STKs catalyze the ...
41-210 1.06e-10

Catalytic domain of the Serine/Threonine Kinase, Kinase Suppressor of Ras 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. KSR1 functions as a transducer of TNFalpha-stimulated C-Raf activation of ERK1/2 and NF-kB. Detected activity of KSR1 is cell type specific and context dependent. It is inactive in normal colon epithelial cells and becomes activated at the onset of inflammatory bowel disease (IBD). Similarly, KSR1 activity is undetectable prior to stimulation by EGF or ceramide in COS-7 or YAMC cells, respectively. KSR proteins are widely regarded as pseudokinases, however, this matter is up for debate as catalytic activity has been detected for KSR1 in some systems. The KSR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271054 [Multi-domain]  Cd Length: 279  Bit Score: 61.91  E-value: 1.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  41 KHDNVLSALD-ILQPPHIDyfeeiyVVTELMQS-DLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN 117
Cdd:cd14152    54 RHENVVLFMGaCMHPPHLA------IITSFCKGrTLYSFVRDPKtSLDINKTRQIAQEIIKGMGYLHAKGIVHKDLKSKN 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 118 LLVNSNCVLkICDFGLARVEE-LDESRHMTQEVVTQ---YYRAPEIL--MGSRH------YSNAIDIWSVGCIFAELLGR 185
Cdd:cd14152   128 VFYDNGKVV-ITDFGLFGISGvVQEGRRENELKLPHdwlCYLAPEIVreMTPGKdedclpFSKAADVYAFGTIWYELQAR 206
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1907080392 186 RILFQ---AQSPIQQL---DLITDLLGTPSL 210
Cdd:cd14152   207 DWPLKnqpAEALIWQIgsgEGMKQVLTTISL 237
STKc_TLK2 cd14041
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 2; STKs catalyze the ...
84-275 1.07e-10

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. They phosphorylate and regulate Anti-silencing function 1 protein (Asf1), a histone H3/H4 chaperone that helps facilitate the assembly of chromatin following DNA replication during S phase. TLKs also phosphorylate the H3 histone tail and are essential in transcription. Vertebrates contain two subfamily members, TLK1 and TLK2. The TLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270943 [Multi-domain]  Cd Length: 309  Bit Score: 62.00  E-value: 1.07e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHS--AGILHRDIKPGN-LLVNSNCV--LKICDFGLARVEE------LDESRHMTQEVVTQ 152
Cdd:cd14041   108 MSEKEARSIIMQIVNALKYLNEikPPIIHYDLKPGNiLLVNGTACgeIKITDFGLSKIMDddsynsVDGMELTSQGAGTY 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 153 YYRAPEILMGSRH---YSNAIDIWSVGCIFAE-LLGRRILFQAQSpiqQLDLITDllgtpsleamrtacegakAHILRGP 228
Cdd:cd14041   188 WYLPPECFVVGKEppkISNKVDVWSVGVIFYQcLYGRKPFGHNQS---QQDILQE------------------NTILKAT 246
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1907080392 229 HKQ-PSLPVLytlssqaTHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14041   247 EVQfPPKPVV-------TPEAKAFIRRCLAYRKEDRIDVQQLACDPYL 287
PTKc_Syk_like cd05060
Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
6-176 1.14e-10

Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Syk-like subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. The Syk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270650 [Multi-domain]  Cd Length: 257  Bit Score: 61.21  E-value: 1.14e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   6 PRDGKR--VALKKMPNvfQNLVSCKRVF-RELKMLCFFKHDNVLSALDILQPPhidyfeEIYVVTELM-QSDLHKIIVSP 81
Cdd:cd05060    18 MKSGKEveVAVKTLKQ--EHEKAGKKEFlREASVMAQLDHPCIVRLIGVCKGE------PLMLVMELApLGPLLKYLKKR 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNCVlKICDFGLARVEELDESrhmtqevvtqYYR----- 155
Cdd:cd05060    90 REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNvLLVNRHQA-KISDFGMSRALGAGSD----------YYRattag 158
                         170       180
                  ....*....|....*....|....*....
gi 1907080392 156 -------APE-ILMGSrhYSNAIDIWSVG 176
Cdd:cd05060   159 rwplkwyAPEcINYGK--FSSKSDVWSYG 185
STKc_myosinIIIA_N cd06638
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze ...
3-182 1.16e-10

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132969 [Multi-domain]  Cd Length: 286  Bit Score: 61.57  E-value: 1.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   3 VTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCffKHDNVLSALDILQPPHIDYFEEIYVVTELMQ----SDLHK-I 77
Cdd:cd06638    37 VLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS--DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNggsvTDLVKgF 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  78 IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQYYRA 156
Cdd:cd06638   115 LKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS--AQLTSTRLRRNTSVgTPFWMA 192
                         170       180       190
                  ....*....|....*....|....*....|
gi 1907080392 157 PEILMGSRH----YSNAIDIWSVGCIFAEL 182
Cdd:cd06638   193 PEVIACEQQldstYDARCDVWSLGITAIEL 222
PTKc_Fer cd05085
Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; ...
29-181 1.25e-10

Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells.


Pssm-ID: 270668 [Multi-domain]  Cd Length: 251  Bit Score: 61.18  E-value: 1.25e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  29 RVFRELKMLCFFKHDNVLSALDIL---QPphidyfeeIYVVTELMQSD--LHKIIVSPQPLSSDHVKVFLYQILRGLKYL 103
Cdd:cd05085    39 KFLSEARILKQYDHPNIVKLIGVCtqrQP--------IYIVMELVPGGdfLSFLRKKKDELKTKQLVKFSLDAAAGMAYL 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 104 HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE--LDESRHMTQevVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAE 181
Cdd:cd05085   111 ESKNCIHRDLAARNCLVGENNALKISDFGMSRQEDdgVYSSSGLKQ--IPIKWTAPEALNYGR-YSSESDVWSFGILLWE 187
STKc_GRK2 cd14223
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs ...
61-197 1.29e-10

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK2, also called beta-adrenergic receptor kinase (beta-ARK) or beta-ARK1, is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRK2 contains an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. TheGRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271125 [Multi-domain]  Cd Length: 321  Bit Score: 61.99  E-value: 1.29e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArveeL 139
Cdd:cd14223    76 DKLSFILDLMNGgDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHSRFVVYRDLKPANILLDEFGHVRISDLGLA----C 151
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 140 DESRHMTQEVV-TQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLgrrilfQAQSPIQQ 197
Cdd:cd14223   152 DFSKKKPHASVgTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL------RGHSPFRQ 204
PTKc_Yes cd05069
Catalytic domain of the Protein Tyrosine Kinase, Yes; PTKs catalyze the transfer of the ...
31-185 1.37e-10

Catalytic domain of the Protein Tyrosine Kinase, Yes; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Yes subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270654 [Multi-domain]  Cd Length: 279  Bit Score: 61.63  E-value: 1.37e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  31 FRELKMLCFFKHDNVLSALDILQPphidyfEEIYVVTELMQSDlhKIIVSPQPLSSDHVKV-----FLYQILRGLKYLHS 105
Cdd:cd05069    55 LQEAQIMKKLRHDKLVPLYAVVSE------EPIYIVTEFMGKG--SLLDFLKEGDGKYLKLpqlvdMAAQIADGMAYIER 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 106 AGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELLGR 185
Cdd:cd05069   127 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTK 205
PTZ00266 PTZ00266
NIMA-related protein kinase; Provisional
30-210 1.40e-10

NIMA-related protein kinase; Provisional


Pssm-ID: 173502 [Multi-domain]  Cd Length: 1021  Bit Score: 62.83  E-value: 1.40e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   30 VFRELKmlcffkHDNVLSaldilqppHIDYF-----EEIYVVTELMQS-DLHKIIVSPQPL---SSDHVKV-FLYQILRG 99
Cdd:PTZ00266    65 VMRELK------HKNIVR--------YIDRFlnkanQKLYILMEFCDAgDLSRNIQKCYKMfgkIEEHAIVdITRQLLHA 130
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  100 LKYLHSAG-------ILHRDIKPGNLLV-----------------NSNCVLKICDFGLARVEELDESRHMTqeVVTQYYR 155
Cdd:PTZ00266   131 LAYCHNLKdgpngerVLHRDLKPQNIFLstgirhigkitaqannlNGRPIAKIGDFGLSKNIGIESMAHSC--VGTPYYW 208
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392  156 APEILMG-SRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQldLITDLLGTPSL 210
Cdd:PTZ00266   209 SPELLLHeTKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ--LISELKRGPDL 262
STKc_PIM2 cd14101
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
8-275 1.52e-10

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are three PIM2 isoforms resulting from alternative translation initiation sites. PIM2 is highly expressed in leukemia and lymphomas and has been shown to promote the survival and proliferation of tumor cells. The PIM2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271003 [Multi-domain]  Cd Length: 257  Bit Score: 61.02  E-value: 1.52e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALK-----------KMPNVfqnlVSCKRVFRELKMLCFFK-HDNVLSALDILQPPhidyfEEIYVVTELMQ--SD 73
Cdd:cd14101    24 DGLQVAIKqisrnrvqqwsKLPGV----NPVPNEVALLQSVGGGPgHRGVIRLLDWFEIP-----EGFLLVLERPQhcQD 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  74 LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN--SNCVlKICDFGLARVeeLDESRHmTQEVVT 151
Cdd:cd14101    95 LFDYITERGALDESLARRFFKQVVEAVQHCHSKGVVHRDIKDENILVDlrTGDI-KLIDFGSGAT--LKDSMY-TDFDGT 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 152 QYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIqqldlitdllgtpsLEAmrtacegakahilrgphkQ 231
Cdd:cd14101   171 RVYSPPEWILYHQYHALPATVWSLGILLYDMVCGDIPFERDTDI--------------LKA------------------K 218
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1907080392 232 PSLPVLYTLSSQAtheavhLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14101   219 PSFNKRVSNDCRS------LIRSCLAYNPSDRPSLEQILLHPWM 256
STKc_SRPK2 cd14217
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 2; STKs ...
65-275 1.78e-10

Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPK2 mediates neuronal cell cycle and cell death through regulation of nuclear cyclin D1. It has also been found to promote leukemia cell proliferation by regulating cyclin A1. SRPK2 also plays a role in regulating pre-mRNA splicing and is required for spliceosomal B complex formation. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271119 [Multi-domain]  Cd Length: 366  Bit Score: 61.59  E-value: 1.78e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  65 VVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLV--------------------- 120
Cdd:cd14217    97 MVFEVLGHHLLKWIIKSnyQGLPIRCVKSIIRQVLQGLDYLHSkCKIIHTDIKPENILMcvddayvrrmaaeatewqkag 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 121 -----------------------NSNCV-LKICDFGLARVEEldesRHMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVG 176
Cdd:cd14217   177 apppsgsavstapdllvnpldprNADKIrVKIADLGNACWVH----KHFTEDIQTRQYRSIEVLIGA-GYSTPADIWSTA 251
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 177 CIFAELLGRRILFQAQS------PIQQLDLITDLLGT-PSLEAMRTAC-------EGAKAHILRgpHKQPSL-PVL---Y 238
Cdd:cd14217   252 CMAFELATGDYLFEPHSgedysrDEDHIAHIIELLGCiPRHFALSGKYsreffnrRGELRHITK--LKPWSLfDVLvekY 329
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1907080392 239 TLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14217   330 GWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWL 366
STKc_SGK1 cd05602
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
90-268 1.90e-10

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. The SGK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270753 [Multi-domain]  Cd Length: 339  Bit Score: 61.57  E-value: 1.90e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  90 KVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMgSRHYSNA 169
Cdd:cd05602   111 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEPNGTTSTFCGTPEYLAPEVLH-KQPYDRT 188
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 170 IDIWSVGCIFAELLgrrilfqaqspiqqldlitdlLGTPSLEAMRTAceGAKAHILRGPHKqpslpvlytLSSQATHEAV 249
Cdd:cd05602   189 VDWWCLGAVLYEML---------------------YGLPPFYSRNTA--EMYDNILNKPLQ---------LKPNITNSAR 236
                         170
                  ....*....|....*....
gi 1907080392 250 HLLCRMLVFDPSKRISAKD 268
Cdd:cd05602   237 HLLEGLLQKDRTKRLGAKD 255
PTZ00283 PTZ00283
serine/threonine protein kinase; Provisional
95-183 1.90e-10

serine/threonine protein kinase; Provisional


Pssm-ID: 240344 [Multi-domain]  Cd Length: 496  Bit Score: 62.19  E-value: 1.90e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVV-TQYYRAPEILMgSRHYSNAIDIW 173
Cdd:PTZ00283  151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCgTPYYVAPEIWR-RKPYSKKADMF 229
                          90
                  ....*....|
gi 1907080392 174 SVGCIFAELL 183
Cdd:PTZ00283  230 SLGVLLYELL 239
STKc_MLK3 cd14147
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the ...
25-183 1.96e-10

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK3 is a mitogen-activated protein kinase kinase kinases (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK3 activates multiple MAPK pathways and plays a role in apoptosis, proliferation, migration, and differentiation, depending on the cellular context. It is highly expressed in breast cancer cells and its signaling through c-Jun N-terminal kinase has been implicated in the migration, invasion, and malignancy of cancer cells. MLK3 also functions as a negative regulator of Inhibitor of Nuclear Factor-KappaB Kinase (IKK) and consequently, it also impacts inflammation and immunity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271049 [Multi-domain]  Cd Length: 267  Bit Score: 60.81  E-value: 1.96e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  25 VSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIDYFEEiYVVTELMQSDLHKIIVSPqplssdHVKV-FLYQILRGLKY 102
Cdd:cd14147    44 VTAESVRQEARLFAMLAHPNIIALKAVcLEEPNLCLVME-YAAGGPLSRALAGRRVPP------HVLVnWAVQIARGMHY 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAGI---LHRDIKPGNLLVNSNCV--------LKICDFGLARveELDESRHMTQeVVTQYYRAPEILMGSRhYSNAID 171
Cdd:cd14147   117 LHCEALvpvIHRDLKSNNILLLQPIEnddmehktLKITDFGLAR--EWHKTTQMSA-AGTYAWMAPEVIKAST-FSKGSD 192
                         170
                  ....*....|..
gi 1907080392 172 IWSVGCIFAELL 183
Cdd:cd14147   193 VWSFGVLLWELL 204
STKc_ACVR2a cd14141
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the ...
92-214 1.98e-10

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2a (or ActRIIA) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271043 [Multi-domain]  Cd Length: 290  Bit Score: 61.21  E-value: 1.98e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  92 FLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQ-EVVTQYYRAPEILMGSRHYSN-- 168
Cdd:cd14141   107 YLHEDIPGLKDGHKPAIAHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHgQVGTRRYMAPEVLEGAINFQRda 186
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1907080392 169 --AIDIWSVGCIFAELLGRriLFQAQSPIQQ--LDLITDLLGTPSLEAMR 214
Cdd:cd14141   187 flRIDMYAMGLVLWELASR--CTASDGPVDEymLPFEEEVGQHPSLEDMQ 234
STK_BAK1_like cd14664
Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; ...
32-186 1.99e-10

Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes three leucine-rich repeat receptor-like kinases (LRR-RLKs): Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1), and Physcomitrella patens CLL1B clavata1-like receptor S/T protein kinase. BAK1 functions in various signaling pathways. It plays a role in BR (brassinosteroid)-regulated plant development as a co-receptor of BRASSINOSTEROID (BR) INSENSITIVE 1 (BRI1), the receptor for BRs, and is required for full activation of BR signaling. It also modulates pathways involved in plant resistance to pathogen infection (pattern-triggered immunity, PTI) and herbivore attack (wound- or herbivore feeding-induced accumulation of jasmonic acid (JA) and JA-isoleucine. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The STK_BAK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271134 [Multi-domain]  Cd Length: 270  Bit Score: 60.97  E-value: 1.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPHIDYfeeiyVVTELMQ-----SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLH-- 104
Cdd:cd14664    39 AEIQTLGMIRHRNIVRLRGYCSNPTTNL-----LVYEYMPngslgELLHSRPESQPPLDWETRQRIALGSARGLAYLHhd 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 105 -SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELL 183
Cdd:cd14664   114 cSPLIIHRDVKSNNILLDEEFEAHVADFGLAKLMDDKDSHVMSSVAGSYGYIAPEYAYTGK-VSEKSDVYSYGVVLLELI 192

                  ....
gi 1907080392 184 -GRR 186
Cdd:cd14664   193 tGKR 196
PTKc_RET cd05045
Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs ...
82-183 2.04e-10

Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor PTK (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma. The RET subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173631 [Multi-domain]  Cd Length: 290  Bit Score: 61.13  E-value: 2.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPEIL 160
Cdd:cd05045   122 RALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRdVYEEDSYVKRSKGRIPVKWMAIESL 201
                          90       100
                  ....*....|....*....|...
gi 1907080392 161 MgSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05045   202 F-DHIYTTQSDVWSFGVLLWEIV 223
STKc_MLCK1 cd14191
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze ...
57-178 2.12e-10

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK1 (or MYLK1) phosphorylates myosin regulatory light chain and controls the contraction of smooth muscles. The MLCK1 gene expresses three transcripts in a cell-specific manner: a short MLCK1 which contains three immunoglobulin (Ig)-like and one fibronectin type III (FN3) domains, PEVK and actin-binding regions, and a kinase domain near the C-terminus followed by a regulatory segment containing an autoinhibitory Ca2+/calmodulin binding site; a long MLCK1 containing six additional Ig-like domains at the N-terminus compared to the short MLCK1; and the C-terminal Ig module which results in the expression of telokin in phasic smooth muscles, leading to Ca2+ desensitization by cyclic nucleotides of smooth muscle force. MLCK1 is also responsible for myosin regulatory light chain phosphorylation in nonmuscle cells and may play a role in regulating myosin II ATPase activity. The MLCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271093 [Multi-domain]  Cd Length: 259  Bit Score: 60.79  E-value: 2.12e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  57 IDYFEE---IYVVTELMQSD--LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLL-VN-SNCVLKIC 129
Cdd:cd14191    65 VDAFEEkanIVMVLEMVSGGelFERIIDEDFELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMcVNkTGTKIKLI 144
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1907080392 130 DFGLARveELDESRHMTQEVVTQYYRAPEILmGSRHYSNAIDIWSVGCI 178
Cdd:cd14191   145 DFGLAR--RLENAGSLKVLFGTPEFVAPEVI-NYEPIGYATDMWSIGVI 190
STKc_SGK cd05575
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; ...
95-183 2.15e-10

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270727 [Multi-domain]  Cd Length: 323  Bit Score: 61.18  E-value: 2.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWS 174
Cdd:cd05575   104 EIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCK-EGIEPSDTTSTFCGTPEYLAPEVLR-KQPYDRTVDWWC 181

                  ....*....
gi 1907080392 175 VGCIFAELL 183
Cdd:cd05575   182 LGAVLYEML 190
STKc_MAP4K4_6_N cd06636
N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase ...
84-182 2.25e-10

N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. The MAP4K4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270806 [Multi-domain]  Cd Length: 282  Bit Score: 60.79  E-value: 2.25e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQYYRAPEILMG 162
Cdd:cd06636   118 LKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIgTPYWMAPEVIAC 195
                          90       100
                  ....*....|....*....|....
gi 1907080392 163 SRH----YSNAIDIWSVGCIFAEL 182
Cdd:cd06636   196 DENpdatYDYRSDIWSLGITAIEM 219
STKc_cPKC_beta cd05616
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs ...
61-192 2.30e-10

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG (1,2-diacylglycerol) in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG, and in most cases, phosphatidylserine (PS) for activation. The cPKC-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270767 [Multi-domain]  Cd Length: 323  Bit Score: 61.17  E-value: 2.30e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEL 139
Cdd:cd05616    74 DRLYFVMEYVNGgDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 153
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1907080392 140 DesrHMTQEVV--TQYYRAPEILmGSRHYSNAIDIWSVGCIFAELLGRRILFQAQ 192
Cdd:cd05616   154 D---GVTTKTFcgTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 204
STKc_aPKC_iota cd05618
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze ...
64-189 2.34e-10

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270769 [Multi-domain]  Cd Length: 364  Bit Score: 61.59  E-value: 2.34e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  64 YVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESR 143
Cdd:cd05618    98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGD 176
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1907080392 144 HMTQEVVTQYYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILF 189
Cdd:cd05618   177 TTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 221
PTKc_PDGFR_beta cd05107
Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; ...
50-183 2.41e-10

Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor PTK (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. The PDGFR beta subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133238 [Multi-domain]  Cd Length: 401  Bit Score: 61.57  E-value: 2.41e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  50 DILQPPHIDYFEEiYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKIC 129
Cdd:cd05107   203 DIESSNYESPYDQ-YLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKIC 281
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392 130 DFGLARvEELDESRHMTQ--EVVTQYYRAPEILMGSRhYSNAIDIWSVGCIFAELL 183
Cdd:cd05107   282 DFGLAR-DIMRDSNYISKgsTFLPLKWMAPESIFNNL-YTTLSDVWSFGILLWEIF 335
STKc_TGFbR2_like cd14055
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II ...
96-266 2.66e-10

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as TGFbR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. TGFbR2 acts as the receptor for TGFbeta, which is crucial in growth control and homeostasis in many different tissues. It plays roles in regulating apoptosis and in maintaining the balance between self renewal and cell loss. It also plays a key role in maintaining vascular integrity and in regulating responses to genotoxic stress. Mutations in TGFbR2 can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. The TGFbR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270957 [Multi-domain]  Cd Length: 295  Bit Score: 60.85  E-value: 2.66e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHS---------AGILHRDIKPGNLLVNSNCVLKICDFGLA-------RVEELDESrhmtQEVVTQYYRAPEI 159
Cdd:cd14055   107 LARGLAHLHSdrtpcgrpkIPIAHRDLKSSNILVKNDGTCVLADFGLAlrldpslSVDELANS----GQVGTARYMAPEA 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 160 LMGSRHYSN-----AIDIWSVGCIFAELLGRRILFQAQSPIqQLDLITDLLGTPSLEAMRTAcegakahILRGpHKQPSL 234
Cdd:cd14055   183 LESRVNLEDlesfkQIDVYSMALVLWEMASRCEASGEVKPY-ELPFGSKVRERPCVESMKDL-------VLRD-RGRPEI 253
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1907080392 235 PvlytlSSQATHEAVHLLCRMLV----FDPSKRISA 266
Cdd:cd14055   254 P-----DSWLTHQGMCVLCDTITecwdHDPEARLTA 284
STKc_MASTL cd05610
Catalytic domain of the Serine/Threonine Kinase, Microtubule-associated serine/threonine-like ...
63-276 2.72e-10

Catalytic domain of the Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase (also called greatwall kinase); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. MASTL, also called greatwall kinase (Gwl), is involved in the regulation of mitotic entry, which is controlled by the coordinated activities of protein kinases and opposing protein phosphatases (PPs). The cyclin B/CDK1 complex induces entry into M-phase while PP2A-B55 shows anti-mitotic activity. MASTL/Gwl is activated downstream of cyclin B/CDK1 and indirectly inhibits PP2A-B55 by phosphorylating the small protein alpha-endosulfine (Ensa) or the cAMP-regulated phosphoprotein 19 (Arpp19), resulting in M-phase progression. Gwl kinase may also play roles in mRNA stabilization and DNA checkpoint recovery. The human MASTL gene has also been named FLJ14813; a missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. The MASTL kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270761 [Multi-domain]  Cd Length: 349  Bit Score: 61.05  E-value: 2.72e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTE-LMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE---E 138
Cdd:cd05610    79 VYLVMEyLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTlnrE 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 139 L----------------DESR----------HMTQEVVTQY-----------------------YRAPEILMGSRHYSnA 169
Cdd:cd05610   159 LnmmdilttpsmakpknDYSRtpgqvlslisSLGFNTPTPYrtpksvrrgaarvegerilgtpdYLAPELLLGKPHGP-A 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 170 IDIWSVGCIFAELLGRRILFQAQSPIQQLDlitdllgtpsleamrtacegakaHILRGPHKQPSLPVLYTLSSQathEAV 249
Cdd:cd05610   238 VDWWALGVCLFEFLTGIPPFNDETPQQVFQ-----------------------NILNRDIPWPEGEEELSVNAQ---NAI 291
                         250       260
                  ....*....|....*....|....*..
gi 1907080392 250 HLLcrmLVFDPSKRISAKDALAHPYLD 276
Cdd:cd05610   292 EIL---LTMDPTKRAGLKELKQHPLFH 315
STKc_PKB_alpha cd05594
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); ...
84-201 2.77e-10

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B alpha (also called Akt1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270746 [Multi-domain]  Cd Length: 356  Bit Score: 61.20  E-value: 2.77e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMg 162
Cdd:cd05594   122 FSEDRARFYGAEIVSALDYLHSEkNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLE- 199
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1907080392 163 SRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLI 201
Cdd:cd05594   200 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 238
PTKc_Csk_like cd05039
Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
9-185 2.93e-10

Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of Csk, Chk, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. The Csk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270635 [Multi-domain]  Cd Length: 256  Bit Score: 60.06  E-value: 2.93e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPNvfqNLVSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIdyfeeiYVVTELM-QSDLHKIIVS--PQPL 84
Cdd:cd05039    29 GQKVAVKCLKD---DSTAAQAFLAEASVMTTLRHPNLVQLLGVvLEGNGL------YIVTEYMaKGSLVDYLRSrgRAVI 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveelDESRHMTQEVVTQYYRAPEILMGSR 164
Cdd:cd05039   100 TRKDQLGFALDVCEGMEYLESKKFVHRDLAARNVLVSEDNVAKVSDFGLAK----EASSNQDGGKLPIKWTAPEALREKK 175
                         170       180
                  ....*....|....*....|...
gi 1907080392 165 hYSNAIDIWSVGCIFAEL--LGR 185
Cdd:cd05039   176 -FSTKSDVWSFGILLWEIysFGR 197
PTKc_Ack_like cd05040
Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs ...
95-176 3.03e-10

Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. The Ack-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270636 [Multi-domain]  Cd Length: 258  Bit Score: 60.05  E-value: 3.03e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVeeLDESRHMtqeVVTQYYR-------APEILmGSRHYS 167
Cdd:cd05040   106 QIANGMAYLESKRFIHRDLAARNILLASKDKVKIGDFGLMRA--LPQNEDH---YVMQEHRkvpfawcAPESL-KTRKFS 179

                  ....*....
gi 1907080392 168 NAIDIWSVG 176
Cdd:cd05040   180 HASDVWMFG 188
PTKc_PDGFR_alpha cd05105
Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha; ...
84-183 3.04e-10

Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor PTK (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome and chronic eosinophilic leukemia. The PDGFR alpha subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173653 [Multi-domain]  Cd Length: 400  Bit Score: 61.19  E-value: 3.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQ--EVVTQYYRAPEILM 161
Cdd:cd05105   234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLAR-DIMHDSNYVSKgsTFLPVKWMAPESIF 312
                          90       100
                  ....*....|....*....|..
gi 1907080392 162 GSRhYSNAIDIWSVGCIFAELL 183
Cdd:cd05105   313 DNL-YTTLSDVWSYGILLWEIF 333
PKc_MKK4 cd06616
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
94-198 3.10e-10

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 4; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270790 [Multi-domain]  Cd Length: 291  Bit Score: 60.46  E-value: 3.10e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 YQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMGSRH---YSNA 169
Cdd:cd06616   116 VATVKALNYLKEElKIIHRDVKPSNILLDRNGNIKLCDFGIS--GQLVDSIAKTRDAGCRPYMAPERIDPSASrdgYDVR 193
                          90       100       110
                  ....*....|....*....|....*....|
gi 1907080392 170 IDIWSVGCIFAELLGRRILFQA-QSPIQQL 198
Cdd:cd06616   194 SDVWSLGITLYEVATGKFPYPKwNSVFDQL 223
PTK_CCK4 cd05046
Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also ...
32-182 3.11e-10

Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor PTK (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. The CCK4 subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133178 [Multi-domain]  Cd Length: 275  Bit Score: 60.17  E-value: 3.11e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQ--PPHidyfeeiYVVTE----------LMQSDLHKIIVSPQPLSSDHVKVFLYQILRG 99
Cdd:cd05046    57 RELDMFRKLSHKNVVRLLGLCReaEPH-------YMILEytdlgdlkqfLRATKSKDEKLKPPPLSTKQKVALCTQIALG 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 100 LKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIF 179
Cdd:cd05046   130 MDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQ-EDDFSTKSDVWSFGVLM 208

                  ...
gi 1907080392 180 AEL 182
Cdd:cd05046   209 WEV 211
STKc_GRK1 cd05608
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs ...
95-192 3.24e-10

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK1 (also called rhodopsin kinase) belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270759 [Multi-domain]  Cd Length: 288  Bit Score: 60.28  E-value: 3.24e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQYYRAPEILMGsRHYSNAIDIW 173
Cdd:cd05608   113 QIISGLEHLHQRRIIYRDLKPENVLLDDDGNVRISDLGLA--VELKDGQTKTKGYAgTPGFMAPELLLG-EEYDYSVDYF 189
                          90
                  ....*....|....*....
gi 1907080392 174 SVGCIFAELLGRRILFQAQ 192
Cdd:cd05608   190 TLGVTLYEMIAARGPFRAR 208
PTKc_Fyn cd05070
Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the ...
11-185 3.29e-10

Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Fyn/Yrk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase.


Pssm-ID: 270655 [Multi-domain]  Cd Length: 274  Bit Score: 60.08  E-value: 3.29e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  11 RVALKKMPnvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPphidyfEEIYVVTELMQSDLHKIIVSP---QPLSSD 87
Cdd:cd05070    35 KVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE------EPIYIVTEYMSKGSLLDFLKDgegRALKLP 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  88 HVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRhYS 167
Cdd:cd05070   106 NLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FT 184
                         170
                  ....*....|....*...
gi 1907080392 168 NAIDIWSVGCIFAELLGR 185
Cdd:cd05070   185 IKSDVWSFGILLTELVTK 202
STKc_RIP1 cd14027
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze ...
28-175 3.57e-10

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP1 harbors a C-terminal Death domain (DD), which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 can also recruit other kinases including MEKK1, MEKK3, and RIP3 through an intermediate domain (ID) that bears a RIP homotypic interaction motif (RHIM). RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accummulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. RIP kinases serve as essential sensors of cellular stress. The RIP1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270929 [Multi-domain]  Cd Length: 267  Bit Score: 60.21  E-value: 3.57e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILqpphidyFEE--IYVVTELMQSD--LHKIIVSPQPLSsdhVKV-FLYQILRGLKY 102
Cdd:cd14027    36 EALLEEGKMMNRLRHSRVVKLLGVI-------LEEgkYSLVMEYMEKGnlMHVLKKVSVPLS---VKGrIILEIIEGMAY 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE---ELDESRHMTQEVV---------TQYYRAPEILMG-------- 162
Cdd:cd14027   106 LHGKGVIHKDLKPENILVDNDFHIKIADLGLASFKmwsKLTKEEHNEQREVdgtakknagTLYYMAPEHLNDvnakptek 185
                         170
                  ....*....|...
gi 1907080392 163 SRHYSNAIDIWSV 175
Cdd:cd14027   186 SDVYSFAIVLWAI 198
STKc_A-Raf cd14150
Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) ...
95-225 3.65e-10

Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. A-Raf cooperates with C-Raf in regulating ERK transient phosphorylation that is associated with cyclin D expression and cell cycle progression. Mice deficient in A-Raf are born alive but show neurological and intestinal defects. A-Raf demonstrates low kinase activity to MEK, compared with B- and C-Raf, and may also have alternative functions other than in the ERK signaling cascade. It regulates the M2 type pyruvate kinase, a key glycolytic enzyme. It also plays a role in endocytic membrane trafficking. A-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. It functions in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The A-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271052 [Multi-domain]  Cd Length: 265  Bit Score: 60.03  E-value: 3.65e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE-ELDESRHMTQEVVTQYYRAPEI--LMGSRHYSNAID 171
Cdd:cd14150   104 QTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKtRWSGSQQVEQPSGSILWMAPEVirMQDTNPYSFQSD 183
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 172 IWSVGCIFAELLGRRILFqaqSPIQQLDLITDLLG----TPSLEAMRTACEGAKAHIL 225
Cdd:cd14150   184 VYAYGVVLYELMSGTLPY---SNINNRDQIIFMVGrgylSPDLSKLSSNCPKAMKRLL 238
STKc_aPKC_zeta cd05617
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze ...
84-203 4.36e-10

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC-zeta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270768 [Multi-domain]  Cd Length: 357  Bit Score: 60.42  E-value: 4.36e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMGs 163
Cdd:cd05617   113 LPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCK-EGLGPGDTTSTFCGTPNYIAPEILRG- 190
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1907080392 164 RHYSNAIDIWSVGCIFAELLGRRilfqaqSPiqqLDLITD 203
Cdd:cd05617   191 EEYGFSVDWWALGVLMFEMMAGR------SP---FDIITD 221
PTKc_FAK cd05056
Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the ...
63-263 4.61e-10

Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) PTK that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. The FAK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133187 [Multi-domain]  Cd Length: 270  Bit Score: 59.74  E-value: 4.61e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQ-SDLHKII-VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELD 140
Cdd:cd05056    81 VWIVMELAPlGELRSYLqVNKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYMEDE 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 141 ESRHMTQEVVTQYYRAPEILmGSRHYSNAIDIWSVG-CIFaellgrRILFQAQSPIQQLDlITDLLGtpSLEamrtaceg 219
Cdd:cd05056   161 SYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGvCMW------EILMLGVKPFQGVK-NNDVIG--RIE-------- 222
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1907080392 220 aKAHILRGPHKQPslPVLYtlssqatheavHLLCRMLVFDPSKR 263
Cdd:cd05056   223 -NGERLPMPPNCP--PTLY-----------SLMTKCWAYDPSKR 252
STKc_MAP3K8 cd13995
Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) ...
95-275 4.70e-10

Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K8 is also called Tumor progression locus 2 (Tpl2) or Cancer Osaka thyroid (Cot), and was first identified as a proto-oncogene in T-cell lymphoma induced by MoMuL virus and in breast carcinoma induced by MMTV. Activated MAP3K8 induces various MAPK pathways including Extracellular Regulated Kinase (ERK) 1/2, c-Jun N-terminal kinase (JNK), and p38. It plays a pivotal role in innate immunity, linking Toll-like receptors to the production of TNF and the activation of ERK in macrophages. It is also required in interleukin-1beta production and is critical in host defense against Gram-positive bacteria. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270897 [Multi-domain]  Cd Length: 256  Bit Score: 59.64  E-value: 4.70e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNL-LVNSNCVLkiCDFGLarveeldeSRHMTQEVV-------TQYYRAPEILMgSRHY 166
Cdd:cd13995   104 HVLKGLDFLHSKNIIHHDIKPSNIvFMSTKAVL--VDFGL--------SVQMTEDVYvpkdlrgTEIYMSPEVIL-CRGH 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 167 SNAIDIWSVGCIfaellgrrilfqaqspiqqldLITDLLGTPSLeaMRTACEGAKAHILRGPHKQPslPVLYTLSSQATH 246
Cdd:cd13995   173 NTKADIYSLGAT---------------------IIHMQTGSPPW--VRRYPRSAYPSYLYIIHKQA--PPLEDIAQDCSP 227
                         170       180
                  ....*....|....*....|....*....
gi 1907080392 247 EAVHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd13995   228 AMRELLEAALERNPNHRSSAAELLKHEAL 256
PTKc_Btk_Bmx cd05113
Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow ...
63-182 4.77e-10

Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor, leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. The Btk/Bmx subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173657 [Multi-domain]  Cd Length: 256  Bit Score: 59.51  E-value: 4.77e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSD-----LHKIIVSPQPLssdHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 137
Cdd:cd05113    74 IFIITEYMANGcllnyLREMRKRFQTQ---QLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 150
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1907080392 138 ELDEsrhMTQEVVTQY---YRAPEILMGSRhYSNAIDIWSVGCIFAEL 182
Cdd:cd05113   151 LDDE---YTSSVGSKFpvrWSPPEVLMYSK-FSSKSDVWAFGVLMWEV 194
PTKc_EphR_B cd05065
Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors; PTKs catalyze ...
93-183 4.99e-10

Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EphB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphB receptors play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of colon cancer progression. EphRs comprise the largest subfamily of receptor PTKs (RTKs). They contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. The EphB subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173638 [Multi-domain]  Cd Length: 269  Bit Score: 59.50  E-value: 4.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  93 LYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEV----VTQYYRAPEILmGSRHYSN 168
Cdd:cd05065   112 LRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSlggkIPIRWTAPEAI-AYRKFTS 190
                          90
                  ....*....|....*
gi 1907080392 169 AIDIWSVGCIFAELL 183
Cdd:cd05065   191 ASDVWSYGIVMWEVM 205
PTKc_HER2 cd05109
Catalytic domain of the Protein Tyrosine Kinase, HER2; PTKs catalyze the transfer of the ...
95-183 5.07e-10

Catalytic domain of the Protein Tyrosine Kinase, HER2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 (ErbB2, HER2/neu) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner of other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. The HER2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270684 [Multi-domain]  Cd Length: 279  Bit Score: 59.65  E-value: 5.07e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQ--EVVTQYYRAPEILmgSRHYSNAIDI 172
Cdd:cd05109   117 QIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADggKVPIKWMALESIL--HRRFTHQSDV 194
                          90
                  ....*....|.
gi 1907080392 173 WSVGCIFAELL 183
Cdd:cd05109   195 WSYGVTVWELM 205
STKc_ROCK1 cd05622
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
63-193 5.16e-10

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. The ROCK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270772 [Multi-domain]  Cd Length: 405  Bit Score: 60.40  E-value: 5.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDES 142
Cdd:cd05622   148 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 227
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 143 RHMTQEVVTQYYRAPEILM---GSRHYSNAIDIWSVGCIFAELLGRRILFQAQS 193
Cdd:cd05622   228 VRCDTAVGTPDYISPEVLKsqgGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 281
PTKc_Fes_like cd05041
Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; ...
99-181 5.19e-10

Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions.


Pssm-ID: 270637 [Multi-domain]  Cd Length: 251  Bit Score: 59.38  E-value: 5.19e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  99 GLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDE---SRHMTQevVTQYYRAPEILMGSRhYSNAIDIWSV 175
Cdd:cd05041   106 GMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEDGEytvSDGLKQ--IPIKWTAPEALNYGR-YTSESDVWSF 182

                  ....*.
gi 1907080392 176 GCIFAE 181
Cdd:cd05041   183 GILLWE 188
STKc_ROCK cd05596
Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein ...
103-193 5.34e-10

Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270747 [Multi-domain]  Cd Length: 352  Bit Score: 60.08  E-value: 5.34e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILM---GSRHYSNAIDIWSVGCIF 179
Cdd:cd05596   141 IHSMGFVHRDVKPDNMLLDASGHLKLADFGTCMKMDKDGLVRSDTAVGTPDYISPEVLKsqgGDGVYGRECDWWSVGVFL 220
                          90
                  ....*....|....
gi 1907080392 180 AELLGRRILFQAQS 193
Cdd:cd05596   221 YEMLVGDTPFYADS 234
STKc_YPK1_like cd05585
Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the ...
90-183 5.46e-10

Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270737 [Multi-domain]  Cd Length: 313  Bit Score: 59.89  E-value: 5.46e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  90 KVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTqEVVTQYYRAPEILMGsRHYSNA 169
Cdd:cd05585    97 RFYTAELLCALECLHKFNVIYRDLKPENILLDYTGHIALCDFGLCKLNMKDDDKTNT-FCGTPEYLAPELLLG-HGYTKA 174
                          90
                  ....*....|....
gi 1907080392 170 IDIWSVGCIFAELL 183
Cdd:cd05585   175 VDWWTLGVLLYEML 188
PK_GC-A_B cd14042
Pseudokinase domain of the membrane Guanylate Cyclase receptors, GC-A and GC-B; The ...
9-186 5.46e-10

Pseudokinase domain of the membrane Guanylate Cyclase receptors, GC-A and GC-B; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity and/or ATP binding. GC-A binds and is activated by the atrial and B-type natriuretic peptides, ANP and BNP, which are important in blood pressure regulation and cardiac pathophysiology. GC-B binds the C-type natriuretic peptide, CNP, which is a potent vasorelaxant and functions in vascular remodeling and bone growth regulation. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC-A/B subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270944 [Multi-domain]  Cd Length: 279  Bit Score: 59.53  E-value: 5.46e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMPnvFQNLVSCKRVFRELKMLCFFKHDNV---LSAldILQPPHIdyfeeiYVVTELM-QSDLHKIivspqpL 84
Cdd:cd14042    30 GNLVAIKKVN--KKRIDLTREVLKELKHMRDLQHDNLtrfIGA--CVDPPNI------CILTEYCpKGSLQDI------L 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  85 SSDHVKV-------FLYQILRGLKYLHSAGI-LHRDIKPGNLLVNSNCVLKICDFGLARVEELDE-SRHMTQEVVTQYYR 155
Cdd:cd14042    94 ENEDIKLdwmfrysLIHDIVKGMHYLHDSEIkSHGNLKSSNCVVDSRFVLKITDFGLHSFRSGQEpPDDSHAYYAKLLWT 173
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907080392 156 APEIL-MGSRHY--SNAIDIWSVGCIFAELLGRR 186
Cdd:cd14042   174 APELLrDPNPPPpgTQKGDVYSFGIILQEIATRQ 207
PTKc_TrkC cd05094
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C; PTKs catalyze ...
7-202 5.50e-10

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. The TrkC subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270676 [Multi-domain]  Cd Length: 287  Bit Score: 59.64  E-value: 5.50e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   7 RDGKRVALKKMPNvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILqpphIDYFEEIYVVTELMQSDLHK---------- 76
Cdd:cd05094    33 KDKMLVAVKTLKD--PTLAARKDFQREAELLTNLQHDHIVKFYGVC----GDGDPLIMVFEYMKHGDLNKflrahgpdam 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  77 IIVSPQPLSSD---------HVKVflyQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMT 146
Cdd:cd05094   107 ILVDGQPRQAKgelglsqmlHIAT---QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRdVYSTDYYRVGG 183
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1907080392 147 QEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELL--GRRILFQAqSPIQQLDLIT 202
Cdd:cd05094   184 HTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFtyGKQPWFQL-SNTEVIECIT 239
PTKc_Itk cd05112
Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs ...
99-182 5.57e-10

Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk, also known as Tsk or Emt, is a member of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. The Itk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133243 [Multi-domain]  Cd Length: 256  Bit Score: 59.19  E-value: 5.57e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  99 GLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCI 178
Cdd:cd05112   112 GMAYLEEASVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSR-YSSKSDVWSFGVL 190

                  ....
gi 1907080392 179 FAEL 182
Cdd:cd05112   191 MWEV 194
STKc_GRK4 cd05631
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs ...
99-197 6.24e-10

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures and is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173720 [Multi-domain]  Cd Length: 285  Bit Score: 59.62  E-value: 6.24e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  99 GLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAIDIWSVGCI 178
Cdd:cd05631   114 GLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLA--VQIPEGETVRGRVGTVGYMAPEVINNEK-YTFSPDWWGLGCL 190
                          90
                  ....*....|....*....
gi 1907080392 179 FAELLgrrilfQAQSPIQQ 197
Cdd:cd05631   191 IYEMI------QGQSPFRK 203
STKc_nPKC_eta cd05590
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the ...
61-193 6.55e-10

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-eta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270742 [Multi-domain]  Cd Length: 323  Bit Score: 59.92  E-value: 6.55e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEEL 139
Cdd:cd05590    69 DRLFFVMEFVNGgDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGI 147
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907080392 140 DESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELLGRRILFQAQS 193
Cdd:cd05590   148 FNGKTTSTFCGTPDYIAPEILQ-EMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200
PTKc_DDR2 cd05095
Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze ...
31-198 7.26e-10

Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a receptor PTK (RTK) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDR2 results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens as well as collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. The DDR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270677 [Multi-domain]  Cd Length: 297  Bit Score: 59.62  E-value: 7.26e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  31 FRELKMLCFFKHDNV--LSALDILQPPhidyfeeIYVVTELMQS-DLHKIIVSPQP------------LSSDHVKVFLYQ 95
Cdd:cd05095    67 LKEIKIMSRLKDPNIirLLAVCITDDP-------LCMITEYMENgDLNQFLSRQQPegqlalpsnaltVSYSDLRFMAAQ 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPE-ILMGSrhYSNAIDIW 173
Cdd:cd05095   140 IASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRnLYSGDYYRIQGRAVLPIRWMSWEsILLGK--FTTASDVW 217
                         170       180
                  ....*....|....*....|....*
gi 1907080392 174 SVGCIFAELLGrrilFQAQSPIQQL 198
Cdd:cd05095   218 AFGVTLWETLT----FCREQPYSQL 238
STKc_TNIK cd06637
Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs ...
28-182 8.62e-10

Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270807 [Multi-domain]  Cd Length: 296  Bit Score: 59.35  E-value: 8.62e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLS----ALDILQPPHIDyfEEIYVVTELMQ----SDLHKIiVSPQPLSSDHVKVFLYQILRG 99
Cdd:cd06637    47 EEIKQEINMLKKYSHHRNIAtyygAFIKKNPPGMD--DQLWLVMEFCGagsvTDLIKN-TKGNTLKEEWIAYICREILRG 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 100 LKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLArvEELDESRHMTQEVV-TQYYRAPEILMGSRH----YSNAIDIWS 174
Cdd:cd06637   124 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIgTPYWMAPEVIACDENpdatYDFKSDLWS 201

                  ....*...
gi 1907080392 175 VGCIFAEL 182
Cdd:cd06637   202 LGITAIEM 209
STKc_RIP4_like cd14025
Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar ...
65-175 8.72e-10

Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of RIP4, ankyrin (ANK) repeat and kinase domain containing 1 (ANKK1), and similar proteins, all of which harbor C-terminal ANK repeats. RIP4, also called Protein Kinase C-associated kinase (PKK), regulates keratinocyte differentiation and cutaneous inflammation. It activates NF-kappaB and is important in the survival of diffuse large B-cell lymphoma cells. The ANKK1 protein, also called PKK2, has not been studied extensively. The ANKK1 gene, located less than 10kb downstream of the D2 dopamine receptor (DRD2) locus, is altered in the Taq1 A1 polymorphism, which is related to a reduced DRD2 binding affinity and consequently, to mental disorders. The RIP4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270927 [Multi-domain]  Cd Length: 267  Bit Score: 59.04  E-value: 8.72e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  65 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLARVEELDES 142
Cdd:cd14025    70 LVMEYMETGSLEKLLASEPLPWELRFRIIHETAVGMNFLHCMKppLLHLDLKPANILLDAHYHVKISDFGLAKWNGLSHS 149
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1907080392 143 RHMTQEVV--TQYYRAPEILM------GSRH--YSNAIDIWSV 175
Cdd:cd14025   150 HDLSRDGLrgTIAYLPPERFKeknrcpDTKHdvYSFAIVIWGI 192
PTKc_Chk cd05083
Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the ...
9-182 8.84e-10

Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). Chk inhibits Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Like Csk, it is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases that are anchored to the plasma membrane, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. The Chk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270666 [Multi-domain]  Cd Length: 254  Bit Score: 58.73  E-value: 8.84e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKKMpnvfQNLVSCKRVFRELKMLCFFKHDNVLSALDILqpphidYFEEIYVVTELM---------QSDLHKIIV 79
Cdd:cd05083    29 GQKVAVKNI----KCDVTAQAFLEETAVMTKLQHKNLVRLLGVI------LHNGLYIVMELMskgnlvnflRSRGRALVP 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  80 SPQPLssdhvkVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE--ELDESRHMTQevvtqyYRAP 157
Cdd:cd05083    99 VIQLL------QFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKISDFGLAKVGsmGVDNSRLPVK------WTAP 166
                         170       180
                  ....*....|....*....|....*
gi 1907080392 158 EILMGSRhYSNAIDIWSVGCIFAEL 182
Cdd:cd05083   167 EALKNKK-FSSKSDVWSYGVLLWEV 190
STKc_cPKC cd05587
Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; ...
95-183 9.87e-10

Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. cPKCs are potent kinases for histones, myelin basic protein, and protamine. They depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270739 [Multi-domain]  Cd Length: 320  Bit Score: 59.33  E-value: 9.87e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveeldesRHMTQEVVTQY------YRAPEILMgSRHYSN 168
Cdd:cd05587   105 EIAVGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCK-------EGIFGGKTTRTfcgtpdYIAPEIIA-YQPYGK 176
                          90
                  ....*....|....*
gi 1907080392 169 AIDIWSVGCIFAELL 183
Cdd:cd05587   177 SVDWWAYGVLLYEML 191
PTKc_Tyk2_rpt2 cd05080
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze ...
91-185 9.91e-10

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Tyk2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270664 [Multi-domain]  Cd Length: 283  Bit Score: 58.76  E-value: 9.91e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQ-YYRAPEILMGSRhYSN 168
Cdd:cd05080   111 LFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKaVPEGHEYYRVREDGDSPvFWYAPECLKEYK-FYY 189
                          90
                  ....*....|....*..
gi 1907080392 169 AIDIWSVGCIFAELLGR 185
Cdd:cd05080   190 ASDVWSFGVTLYELLTH 206
PTKc_c-ros cd05044
Catalytic domain of the Protein Tyrosine Kinase, C-ros; PTKs catalyze the transfer of the ...
32-183 9.99e-10

Catalytic domain of the Protein Tyrosine Kinase, C-ros; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily contains c-ros, Sevenless, and similar proteins. The proto-oncogene c-ros encodes an orphan receptor PTK (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. The c-ros subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270640 [Multi-domain]  Cd Length: 268  Bit Score: 58.58  E-value: 9.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDI--LQPPHidyfeeiYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQIL-------RGLK 101
Cdd:cd05044    48 KEAHLMSNFKHPNILKLLGVclDNDPQ-------YIILELMEGgDLLSYLRAARPTAFTPPLLTLKDLLsicvdvaKGCV 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 102 YLHSAGILHRDIKPGNLLVNSN----CVLKICDFGLARveelDESRHmtqevvtQYYR------------APEILMGSRh 165
Cdd:cd05044   121 YLEDMHFVHRDLAARNCLVSSKdyreRVVKIGDFGLAR----DIYKN-------DYYRkegegllpvrwmAPESLVDGV- 188
                         170
                  ....*....|....*...
gi 1907080392 166 YSNAIDIWSVGCIFAELL 183
Cdd:cd05044   189 FTTQSDVWAFGVLMWEIL 206
PTKc_TrkA cd05092
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A; PTKs catalyze ...
49-227 1.28e-09

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. The TrkA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270674 [Multi-domain]  Cd Length: 280  Bit Score: 58.44  E-value: 1.28e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  49 LDILQPPHIDYF-------EEIYVVTELMQ-SDLHKII---------------VSPQPLSSDHVKVFLYQILRGLKYLHS 105
Cdd:cd05092    61 LTVLQHQHIVRFygvctegEPLIMVFEYMRhGDLNRFLrshgpdakildggegQAPGQLTLGQMLQIASQIASGMVYLAS 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 106 AGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWSVGCIFAELL- 183
Cdd:cd05092   141 LHFVHRDLATRNCLVGQGLVVKIGDFGMSRdIYSTDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDIWSFGVVLWEIFt 219
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392 184 -GRRILFQAqSPIQQLDLITDllgTPSLEAMRTaCEGAKAHILRG 227
Cdd:cd05092   220 yGKQPWYQL-SNTEAIECITQ---GRELERPRT-CPPEVYAIMQG 259
PTKc_Abl cd05052
Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of ...
41-182 1.37e-09

Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) PTK that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. The Abl subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270645 [Multi-domain]  Cd Length: 263  Bit Score: 58.20  E-value: 1.37e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  41 KHDNVLSALDI--LQPPhidyfeeIYVVTELM-QSDLHKIIVSPQPLSSDHVkVFLY---QILRGLKYLHSAGILHRDIK 114
Cdd:cd05052    60 KHPNLVQLLGVctREPP-------FYIITEFMpYGNLLDYLRECNREELNAV-VLLYmatQIASAMEYLEKKNFIHRDLA 131
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392 115 PGNLLVNSNCVLKICDFGLARVeeldesrhMTQEVVTQY--------YRAPEILMGSRhYSNAIDIWSVGCIFAEL 182
Cdd:cd05052   132 ARNCLVGENHLVKVADFGLSRL--------MTGDTYTAHagakfpikWTAPESLAYNK-FSIKSDVWAFGVLLWEI 198
STKc_TLK1 cd14040
Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 1; STKs catalyze the ...
72-201 1.45e-09

Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. A splice variant of TLK1, called TLK1B, is expressed in the presence of double strand breaks (DSBs). It lacks the N-terminal part of TLK1, but is expected to phosphorylate the same substrates. TLK1/1B interacts with Rad9, which is critical in DNA damage-activated checkpoint response, and plays a role in the repair of linearized DNA with incompatible ends. TLKs play important functions during the cell cycle and are implicated in chromatin remodeling, DNA replication and repair, and mitosis. The TLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270942 [Multi-domain]  Cd Length: 299  Bit Score: 58.53  E-value: 1.45e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  72 SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCV---LKICDFGLARVEE-----LDE 141
Cdd:cd14040    96 NDLDFYLKQHKLMSEKEARSIVMQIVNALRYLNEIKppIIHYDLKPGNILLVDGTAcgeIKITDFGLSKIMDddsygVDG 175
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907080392 142 SRHMTQEVVTQYYRAPEILMGSRH---YSNAIDIWSVGCIFAELLGRRILF---QAQSPIQQLDLI 201
Cdd:cd14040   176 MDLTSQGAGTYWYLPPECFVVGKEppkISNKVDVWSVGVIFFQCLYGRKPFghnQSQQDILQENTI 241
PTKc_Ror cd05048
Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan ...
31-182 1.45e-09

Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Ror subfamily consists of Ror1, Ror2, and similar proteins. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. The Ror subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270642 [Multi-domain]  Cd Length: 283  Bit Score: 58.54  E-value: 1.45e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  31 FRELKMLCFFKHDNVLSALDIL--QPPHIDYFEeiYvvteLMQSDLHKIIVSPQPLSSDHVKV-------------FL-- 93
Cdd:cd05048    56 RREAELMSDLQHPNIVCLLGVCtkEQPQCMLFE--Y----MAHGDLHEFLVRHSPHSDVGVSSdddgtassldqsdFLhi 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 -YQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPEILMGSRhYSNAID 171
Cdd:cd05048   130 aIQIAAGMEYLSSHHYVHRDLAARNCLVGDGLTVKISDFGLSRdIYSSDYYRVQSKSLLPVRWMPPEAILYGK-FTTESD 208
                         170
                  ....*....|.
gi 1907080392 172 IWSVGCIFAEL 182
Cdd:cd05048   209 VWSFGVVLWEI 219
PTKc_Tie cd05047
Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
84-183 1.53e-09

Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins, consisting of Tie1 and Tie2, are receptor PTKs (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. The Tie subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270641 [Multi-domain]  Cd Length: 270  Bit Score: 58.13  E-value: 1.53e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTqyYRAPEILMGS 163
Cdd:cd05047   109 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--WMAIESLNYS 186
                          90       100
                  ....*....|....*....|
gi 1907080392 164 RHYSNAiDIWSVGCIFAELL 183
Cdd:cd05047   187 VYTTNS-DVWSYGVLLWEIV 205
PTKc_Lck_Blk cd05067
Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs ...
61-185 1.87e-09

Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lck/Blk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270652 [Multi-domain]  Cd Length: 264  Bit Score: 57.97  E-value: 1.87e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  61 EEIYVVTELMQS----DLHKiivspqplSSDHVKVFLY-------QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKIC 129
Cdd:cd05067    74 EPIYIITEYMENgslvDFLK--------TPSGIKLTINklldmaaQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 145
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 130 DFGLARVEELDESRHMTQEVVTQYYRAPE-ILMGSrhYSNAIDIWSVGCIFAELL--GR 185
Cdd:cd05067   146 DFGLARLIEDNEYTAREGAKFPIKWTAPEaINYGT--FTIKSDVWSFGILLTEIVthGR 202
STKc_Raf cd14062
Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) ...
95-183 2.00e-09

Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Raf kinases act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. Aberrant expression or activation of components in this pathway are associated with tumor initiation, progression, and metastasis. Raf proteins contain a Ras binding domain, a zinc finger cysteine-rich domain, and a catalytic kinase domain. Vertebrates have three Raf isoforms (A-, B-, and C-Raf) with different expression profiles, modes of regulation, and abilities to function in the ERK cascade, depending on cellular context and stimuli. They have essential and non-overlapping roles during embryo- and organogenesis. Knockout of each isoform results in a lethal phenotype or abnormality in most mouse strains. The Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270964 [Multi-domain]  Cd Length: 253  Bit Score: 57.79  E-value: 2.00e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEL-DESRHMTQEVVTQYYRAPEI--LMGSRHYSNAID 171
Cdd:cd14062    97 QTAQGMDYLHAKNIIHRDLKSNNIFLHEDLTVKIGDFGLATVKTRwSGSQQFEQPTGSILWMAPEVirMQDENPYSFQSD 176
                          90
                  ....*....|..
gi 1907080392 172 IWSVGCIFAELL 183
Cdd:cd14062   177 VYAFGIVLYELL 188
PTKc_Axl cd05075
Catalytic domain of the Protein Tyrosine Kinase, Axl; PTKs catalyze the transfer of the ...
11-194 2.46e-09

Catalytic domain of the Protein Tyrosine Kinase, Axl; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. It is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. It is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Axl is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to its ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Axl subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270660 [Multi-domain]  Cd Length: 277  Bit Score: 57.71  E-value: 2.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  11 RVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDI-LQPPHIDYFEEIYVVTELMQ-SDLHKIIV------SPQ 82
Cdd:cd05075    29 KVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVcLQNTESEGYPSPVVILPFMKhGDLHSFLLysrlgdCPV 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMTQEVVTQYYRAPEILm 161
Cdd:cd05075   109 YLPTQMLVKFMTDIASGMEYLSSKNFIHRDLAARNCMLNENMNVCVADFGLSkKIYNGDYYRQGRISKMPVKWIAIESL- 187
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1907080392 162 GSRHYSNAIDIWSVGCIFAELLGRrilfqAQSP 194
Cdd:cd05075   188 ADRVYTTKSDVWSFGVTMWEIATR-----GQTP 215
PK_TRB2 cd14022
Pseudokinase domain of Tribbles Homolog 2; The pseudokinase domain shows similarity to protein ...
37-275 2.69e-09

Pseudokinase domain of Tribbles Homolog 2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB2 binds and negatively regulates the mitogen activated protein kinase (MAPK) kinases, MKK7 and MEK1, which are activators of the MAPKs, ERK and JNK. It controls the activation of inflammatory monocytes, which is essential in innate immune responses and the pathogenesis of inflammatory diseases such as atherosclerosis. TRB2 expression is down-regulated in human acute myeloid leukaemia (AML), which may lead to enhanced cell survival and pathogenesis of the disease. TRB2 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270924 [Multi-domain]  Cd Length: 242  Bit Score: 56.97  E-value: 2.69e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  37 LCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPG 116
Cdd:cd14022    39 FCLPAHSNINQITEIILGE-----TKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIASAVAHCHDGGLVLRDLKLR 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 117 NLLVNSNcvlkicDFGLARVEELDES-------RHMTQEVVTQYYRAPEILMGSRHYS-NAIDIWSVGCIFAELLGRRIL 188
Cdd:cd14022   114 KFVFKDE------ERTRVKLESLEDAyilrghdDSLSDKHGCPAYVSPEILNTSGSYSgKAADVWSLGVMLYTMLVGRYP 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 189 FQAQSPIQQLdlitdllgtpsleamrtacegakAHILRGPHKQPSlpvlyTLSSQATheavHLLCRMLVFDPSKRISAKD 268
Cdd:cd14022   188 FHDIEPSSLF-----------------------SKIRRGQFNIPE-----TLSPKAK----CLIRSILRREPSERLTSQE 235

                  ....*..
gi 1907080392 269 ALAHPYL 275
Cdd:cd14022   236 ILDHPWF 242
STKc_SGK2 cd05603
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; ...
95-201 2.73e-09

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK2 shows a more restricted distribution than SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. The SGK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270754 [Multi-domain]  Cd Length: 321  Bit Score: 58.06  E-value: 2.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIWS 174
Cdd:cd05603   104 EVASAIGYLHSLNIIYRDLKPENILLDCQGHVVLTDFGLCK-EGMEPEETTSTFCGTPEYLAPEVLR-KEPYDRTVDWWC 181
                          90       100
                  ....*....|....*....|....*..
gi 1907080392 175 VGCIFAELLGRRILFQAQSPIQQLDLI 201
Cdd:cd05603   182 LGAVLYEMLYGLPPFYSRDVSQMYDNI 208
PTKc_CSF-1R cd05106
Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs ...
82-185 2.82e-09

Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. The CSF-1R subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133237 [Multi-domain]  Cd Length: 374  Bit Score: 57.93  E-value: 2.82e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  82 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHmtqeVVTQYYRAPEILM 161
Cdd:cd05106   207 WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLAR-DIMNDSNY----VVKGNARLPVKWM 281
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1907080392 162 GSRH-----YSNAIDIWSVGCIFAEL--LGR 185
Cdd:cd05106   282 APESifdcvYTVQSDVWSYGILLWEIfsLGK 312
PTKc_InsR_like cd05032
Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer ...
95-183 2.82e-09

Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. InsR and IGF-1R are receptor PTKs (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. The InsR-like subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173625 [Multi-domain]  Cd Length: 277  Bit Score: 57.35  E-value: 2.82e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPEILMgSRHYSNAIDIW 173
Cdd:cd05032   127 EIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRdIYETDYYRKGGKGLLPVRWMAPESLK-DGVFTTKSDVW 205
                          90
                  ....*....|
gi 1907080392 174 SVGCIFAELL 183
Cdd:cd05032   206 SFGVVLWEMA 215
STKc_C-Raf cd14149
Catalytic domain of the Serine/Threonine Kinase, C-Raf (Rapidly Accelerated Fibrosarcoma) ...
95-220 2.96e-09

Catalytic domain of the Serine/Threonine Kinase, C-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. C-Raf, also known as Raf-1 or c-Raf-1, is ubiquitously expressed and was the first Raf identified. It was characterized as the acquired oncogene from an acutely transforming murine sarcoma virus (3611-MSV) and the transforming agent from the avian retrovirus MH2. C-Raf-deficient mice embryos die around midgestation with increased apoptosis of embryonic tissues, especially in the fetal liver. One of the main functions of C-Raf is restricting caspase activation to promote survival in response to specific stimuli such as Fas stimulation, macrophage apoptosis, and erythroid differentiation. C-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. It functions in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The C-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271051 [Multi-domain]  Cd Length: 283  Bit Score: 57.35  E-value: 2.96e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE-ELDESRHMTQEVVTQYYRAPEI--LMGSRHYSNAID 171
Cdd:cd14149   116 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKsRWSGSQQVEQPTGSILWMAPEVirMQDNNPFSFQSD 195
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 172 IWSVGCIFAELLGRRILFqaqSPIQQLDLITDLLG----TPSLEAMRTACEGA 220
Cdd:cd14149   196 VYSYGIVLYELMTGELPY---SHINNRDQIIFMVGrgyaSPDLSKLYKNCPKA 245
PTKc_Csk cd05082
Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the ...
9-185 3.12e-09

Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Csk is a cytoplasmic (or nonreceptor) PTK containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. The Csk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133213 [Multi-domain]  Cd Length: 256  Bit Score: 56.91  E-value: 3.12e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   9 GKRVALKkmpnVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILqpphIDYFEEIYVVTELM-QSDLHKIIVSP--QPLS 85
Cdd:cd05082    29 GNKVAVK----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI----VEEKGGLYIVTEYMaKGSLVDYLRSRgrSVLG 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  86 SDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveELDESRHMTQEVVTqyYRAPEILMGSRh 165
Cdd:cd05082   101 GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK--WTAPEALREKK- 175
                         170       180
                  ....*....|....*....|..
gi 1907080392 166 YSNAIDIWSVGCIFAEL--LGR 185
Cdd:cd05082   176 FSTKSDVWSFGILLWEIysFGR 197
PTKc_Kit cd05104
Catalytic domain of the Protein Tyrosine Kinase, Kit; PTKs catalyze the transfer of the ...
50-183 3.17e-09

Catalytic domain of the Protein Tyrosine Kinase, Kit; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. The Kit subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270682 [Multi-domain]  Cd Length: 375  Bit Score: 57.99  E-value: 3.17e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  50 DILQPPHIDYFEEIYVVTELMQSDlhkiivsPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKIC 129
Cdd:cd05104   184 DKRRGVRSGSYVDQDVTSEILEED-------ELALDTEDLLSFSYQVAKGMEFLASKNCIHRDLAARNILLTHGRITKIC 256
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 130 DFGLARveeldESRHMTQEVVTQYYRAPEILMGSRH-----YSNAIDIWSVGCIFAELL 183
Cdd:cd05104   257 DFGLAR-----DIRNDSNYVVKGNARLPVKWMAPESifecvYTFESDVWSYGILLWEIF 310
STKc_MRCK_beta cd05624
Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control ...
12-196 3.47e-09

Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase (MRCK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MRCK-beta is expressed ubiquitously in many tissues. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. The MRCK-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This alignment model includes the dimerization domain.


Pssm-ID: 270774 [Multi-domain]  Cd Length: 409  Bit Score: 58.10  E-value: 3.47e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNVFQnlVSCKRVFRELKML------CFFKHDNVLSALDI--LQPPHIDYFEEIY---VVTELMQSDLHKIIVS 80
Cdd:cd05624    88 VAVVKMKNTER--IYAMKILNKWEMLkraetaCFREERNVLVNGDCqwITTLHYAFQDENYlylVMDYYVGGDLLTLLSK 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  81 -PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEI 159
Cdd:cd05624   166 fEDKLPEDMARFYIGEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 245
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1907080392 160 LM----GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQ 196
Cdd:cd05624   246 LQamedGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 286
PK_GC-2D cd14043
Pseudokinase domain of the membrane Guanylate Cyclase receptor, GC-2D; The pseudokinase domain ...
93-185 4.46e-09

Pseudokinase domain of the membrane Guanylate Cyclase receptor, GC-2D; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity and/or ATP binding. GC-2D is allso called Retinal Guanylyl Cyclase 1 (RETGC-1) or Rod Outer Segment membrane Guanylate Cyclase (ROS-GC). It is found in the photoreceptors of the retina where it anchors the reciprocal feedback loop between calcium and cGMP, which regulates the dark, light, and recovery phases in phototransduction. It is also found in other sensory neurons and may be a universal transduction component that plays a role in the perception of all senses. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC-2D subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270945 [Multi-domain]  Cd Length: 267  Bit Score: 56.65  E-value: 4.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  93 LYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEIL---MGSRHYSNA 169
Cdd:cd14043   103 LLDLIKGMRYLHHRGIVHGRLKSRNCVVDGRFVLKITDYGYNEILEAQNLPLPEPAPEELLWTAPELLrdpRLERRGTFP 182
                          90
                  ....*....|....*.
gi 1907080392 170 IDIWSVGCIFAELLGR 185
Cdd:cd14043   183 GDVFSFAIIMQEVIVR 198
PTZ00426 PTZ00426
cAMP-dependent protein kinase catalytic subunit; Provisional
95-195 4.79e-09

cAMP-dependent protein kinase catalytic subunit; Provisional


Pssm-ID: 173616 [Multi-domain]  Cd Length: 340  Bit Score: 57.30  E-value: 4.79e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEeldESRHMTQeVVTQYYRAPEILMGSRHySNAIDIWS 174
Cdd:PTZ00426  139 QIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV---DTRTYTL-CGTPEYIAPEILLNVGH-GKAADWWT 213
                          90       100
                  ....*....|....*....|.
gi 1907080392 175 VGCIFAELLGRRILFQAQSPI 195
Cdd:PTZ00426  214 LGIFIYEILVGCPPFYANEPL 234
STKc_NDR2 cd05627
Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2; STKs catalyze ...
63-226 5.14e-09

Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR2 (also called STK38-like) plays a role in proper centrosome duplication. In addition, it is involved in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. NDR2 is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270776 [Multi-domain]  Cd Length: 366  Bit Score: 57.38  E-value: 5.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA----RVE 137
Cdd:cd05627    77 LYLIMEFLPGgDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCtglkKAH 156
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 138 ELDESRHMTQE------------------------------VVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELLGRRI 187
Cdd:cd05627   157 RTEFYRNLTHNppsdfsfqnmnskrkaetwkknrrqlaystVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEMLIGYP 235
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1907080392 188 LFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILR 226
Cdd:cd05627   236 PFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILR 274
PTK_Ryk cd05043
Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase ...
36-199 5.15e-09

Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. The Ryk subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270639 [Multi-domain]  Cd Length: 279  Bit Score: 56.69  E-value: 5.15e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  36 MLCFFKHDNVLSALDIL----QPPHIDYFEEIYVVTEL-MQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILH 110
Cdd:cd05043    60 LLYGLSHQNLLPILHVCiedgEKPMVLYPYMNWGNLKLfLQQCRLSEANNPQALSTQQLVHMALQIACGMSYLHRRGVIH 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 111 RDIKPGNLLVNSNCVLKICDFGLARveEL----------DESRHMTqevvtqyYRAPEILMgSRHYSNAIDIWSVGCIFA 180
Cdd:cd05043   140 KDIAARNCVIDDELQVKITDNALSR--DLfpmdyhclgdNENRPIK-------WMSLESLV-NKEYSSASDVWSFGVLLW 209
                         170
                  ....*....|....*....
gi 1907080392 181 ELLGrrilfQAQSPIQQLD 199
Cdd:cd05043   210 ELMT-----LGQTPYVEID 223
PTKc_Wee1 cd14051
Catalytic domain of the Protein Tyrosine Kinase, Wee1; PTKs catalyze the transfer of the ...
83-273 6.27e-09

Catalytic domain of the Protein Tyrosine Kinase, Wee1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Wee1 is a nuclear cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. There are two distinct Wee1 proteins in vertebrates showing different expression patterns, called Wee1a and Wee1b. They are functionally dstinct and are implicated in different steps of egg maturation and embryo development. The Wee1 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270953 [Multi-domain]  Cd Length: 275  Bit Score: 56.26  E-value: 6.27e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  83 PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV------------------------NSNCVLKICDFGLA---- 134
Cdd:cd14051   100 RFSEAELKDLLLQVAQGLKYIHSQNLVHMDIKPGNIFIsrtpnpvsseeeeedfegeednpeSNEVTYKIGDLGHVtsis 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 135 --RVEELDeSRHMTQEVVTQYYrapeilmgsRHYSNAiDIWSVGCIFAELLGRRILfqaqspiqqldlitdllgtPSlea 212
Cdd:cd14051   180 npQVEEGD-CRFLANEILQENY---------SHLPKA-DIFALALTVYEAAGGGPL-------------------PK--- 226
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907080392 213 mrtacEGAKAHILRgphkQPSLPVLYTLSSqathEAVHLLCRMLVFDPSKRISAKDALAHP 273
Cdd:cd14051   227 -----NGDEWHEIR----QGNLPPLPQCSP----EFNELLRSMIHPDPEKRPSAAALLQHP 274
PK_GC_unk cd14045
Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The ...
8-194 6.38e-09

Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270947 [Multi-domain]  Cd Length: 269  Bit Score: 56.41  E-value: 6.38e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392   8 DGKRVALKK-MPNVFqnlVSCKRVFRELKMLCFFKHDNVLSALD-ILQPPHIDyfeeiyVVTELM-QSDLHKIIVSPQ-P 83
Cdd:cd14045    29 DGRTVAIKKiAKKSF---TLSKRIRKEVKQVRELDHPNLCKFIGgCIEVPNVA------IITEYCpKGSLNDVLLNEDiP 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA--RVEELDESRHMTQEVVTQYYRAPEI-L 160
Cdd:cd14045   100 LNWGFRFSFATDIARGMAYLHQHKIYHGRLKSSNCVIDDRWVCKIADYGLTtyRKEDGSENASGYQQRLMQVYLPPENhS 179
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907080392 161 MGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSP 194
Cdd:cd14045   180 NTDTEPTQATDVYSYAIILLEIATRNDPVPEDDY 213
STKc_aPKC cd05588
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the ...
84-189 7.29e-09

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270740 [Multi-domain]  Cd Length: 328  Bit Score: 56.66  E-value: 7.29e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMGs 163
Cdd:cd05588    93 LPEEHARFYSAEISLALNFLHEKGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRG- 170
                          90       100
                  ....*....|....*....|....*.
gi 1907080392 164 RHYSNAIDIWSVGCIFAELLGRRILF 189
Cdd:cd05588   171 EDYGFSVDWWALGVLMFEMLAGRSPF 196
STKc_LATS2 cd05626
Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2; STKs ...
59-201 7.54e-09

Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. The LATS2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173715 [Multi-domain]  Cd Length: 381  Bit Score: 56.94  E-value: 7.54e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  59 YFEEIYVVTELMQSDLHKIIVSPQPLSsdhvKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA---- 134
Cdd:cd05626    77 YFVMDYIPGGDMMSLLIRMEVFPEVLA----RFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCtgfr 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 135 --------------RVEELDES-------------RHMTQE---------------VVTQYYRAPEILMgSRHYSNAIDI 172
Cdd:cd05626   153 wthnskyyqkgshiRQDSMEPSdlwddvsncrcgdRLKTLEqratkqhqrclahslVGTPNYIAPEVLL-RKGYTQLCDW 231
                         170       180       190
                  ....*....|....*....|....*....|
gi 1907080392 173 WSVGCIFAELLGRRILFQAQSPIQ-QLDLI 201
Cdd:cd05626   232 WSVGVILFEMLVGQPPFLAPTPTEtQLKVI 261
STKc_PKN cd05589
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer ...
99-183 7.92e-09

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270741 [Multi-domain]  Cd Length: 326  Bit Score: 56.54  E-value: 7.92e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  99 GLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEELDESRHMTQEVVTQYYRAPEILMGSrHYSNAIDIWSVGCI 178
Cdd:cd05589   113 GLQFLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCK-EGMGFGDRTSTFCGTPEFLAPEVLTDT-SYTRAVDWWGLGVL 190

                  ....*
gi 1907080392 179 FAELL 183
Cdd:cd05589   191 IYEML 195
STKc_PINK1 cd14018
Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze ...
91-269 8.37e-09

Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PINK1 contains an N-terminal mitochondrial targeting sequence, a catalytic domain, and a C-terminal regulatory region. It plays an important role in maintaining mitochondrial homeostasis. It protects cells against oxidative stress-induced apoptosis by phosphorylating the chaperone TNFR-associated protein 1 (TRAP1), also called Hsp75. Phosphorylated TRAP1 prevents cytochrome c release and peroxide-induced apoptosis. PINK1 interacts with Omi/HtrA2, a serine protease, and Parkin, an E3 ubiquitin ligase, in different pathways to promote mitochondrial health. The parkin gene is the most commonly mutated gene in autosomal recessive familial parkinsonism. Mutations within the catalytic domain of PINK1 are also associated with Parkinson's disease. The PINK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270920 [Multi-domain]  Cd Length: 313  Bit Score: 56.35  E-value: 8.37e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  91 VFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNC-VLKICDFGLARVEE-----LDESRHMTQEVVTQYYRAPEILM 161
Cdd:cd14018   142 VMILQLLEGVDHLVRHGIAHRDLKSDNILLeldFDGCpWLVIADFGCCLADDsiglqLPFSSWYVDRGGNACLMAPEVST 221
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 162 GSR------HYSNAiDIWSVGCIFAELLGRRILFQAQSpiqqldlitdllgtpsleamrtacegaKAHILRGPHKQPSLP 235
Cdd:cd14018   222 AVPgpgvviNYSKA-DAWAVGAIAYEIFGLSNPFYGLG---------------------------DTMLESRSYQESQLP 273
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1907080392 236 VLytlssqatHEAVHLLCRMLVF-----DPSKRISAKDA 269
Cdd:cd14018   274 AL--------PSAVPPDVRQVVKdllqrDPNKRVSARVA 304
PTKc_PDGFR cd05055
Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; ...
33-182 9.77e-09

Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. The PDGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 133186 [Multi-domain]  Cd Length: 302  Bit Score: 55.95  E-value: 9.77e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  33 ELKMLCFF-KHDNV---LSALDILQPphidyfeeIYVVTEL-MQSDLHKIIVSPQP--LSSDHVKVFLYQILRGLKYLHS 105
Cdd:cd05055    88 ELKIMSHLgNHENIvnlLGACTIGGP--------ILVITEYcCYGDLLNFLRRKREsfLTLEDLLSFSYQVAKGMAFLAS 159
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 106 AGILHRDIKPGNLLVNSNCVLKICDFGLARveeldESRHMTQEVVTQYYRAPEILMGSRH-----YSNAIDIWSVGCIFA 180
Cdd:cd05055   160 KNCIHRDLAARNVLLTHGKIVKICDFGLAR-----DIMNDSNYVVKGNARLPVKWMAPESifncvYTFESDVWSYGILLW 234

                  ..
gi 1907080392 181 EL 182
Cdd:cd05055   235 EI 236
STKc_WNK4 cd14033
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze ...
28-182 1.07e-08

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK4 shows a restricted expression pattern and is usually found in epithelial cells. It is expressed in nephrons and in extrarenal tissues including intestine, eye, mammary glands, and prostate. WNK4 regulates a variety of ion transport proteins including apical or basolateral ion transporters, ion channels in the transcellular pathway, and claudins in the paracellular pathway. Mutations in WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension and hyperkalemia. WNK4 inhibits the activity of the thiazide-sensitive Na-Cl cotransporter (NCC), which is responsible for about 15% of NaCl reabsorption in the kidney. It also inhibits the renal outer medullary potassium channel (ROMK) and decreases its surface expression. Hypertension and hyperkalemia in PHAII patients with WNK4 mutations may be partly due to increased NaCl reabsorption through NCC and impaired renal potassium secretion by ROMK, respectively. The WNK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270935 [Multi-domain]  Cd Length: 261  Bit Score: 55.39  E-value: 1.07e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPhIDYFEEIYVVTELMQSDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHS- 105
Cdd:cd14033    45 QRFSEEVEMLKGLQHPNIVRFYDSWKST-VRGHKCIILVTELMTSGTLKTYLKRfREMKLKLLQRWSRQILKGLHFLHSr 123
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 106 -AGILHRDIKPGNLLVNS-NCVLKICDFGLArveELDESRHMTQEVVTQYYRAPEilMGSRHYSNAIDIWSVGCIFAEL 182
Cdd:cd14033   124 cPPILHRDLKCDNIFITGpTGSVKIGDLGLA---TLKRASFAKSVIGTPEFMAPE--MYEEKYDEAVDVYAFGMCILEM 197
PK_TRB cd13976
Pseudokinase domain of Tribbles Homolog proteins; The pseudokinase domain shows similarity to ...
64-275 1.19e-08

Pseudokinase domain of Tribbles Homolog proteins; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Tribbles Homolog (TRB) proteins interact with many proteins involved in signaling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, differentiation, and gene expression. TRB proteins bind to the middle kinase in mitogen activated protein kinase (MAPK) signaling cascades, MAPK kinases. They regulate the activity of MAPK kinases, and thus, affect MAPK signaling. In Drosophila, Tribbles regulates String, the ortholog of mammalian Cdc25, during morphogenesis. String is implicated in the progression of mitosis during embryonic development. Vertebrates contain three TRB proteins encoded by three separate genes: Tribbles-1 (TRB1 or TRIB1), Tribbles-2 (TRB2 or TRIB2), and Tribbles-3 (TRB3 or TRIB3). The TRB subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270878 [Multi-domain]  Cd Length: 242  Bit Score: 55.13  E-value: 1.19e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  64 YVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDikpgnllvnsncvLKICDFGLA-------RV 136
Cdd:cd13976    61 YVFFERDHGDLHSYVRSRKRLREPEAARLFRQIASAVAHCHRNGIVLRD-------------LKLRKFVFAdeertklRL 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 137 EELDESRHMTQEVVTQY-------YRAPEILMGSRHYS-NAIDIWSVGCIFAELLGRRILFQAQSPIQQLdlitdllgtp 208
Cdd:cd13976   128 ESLEDAVILEGEDDSLSdkhgcpaYVSPEILNSGATYSgKAADVWSLGVILYTMLVGRYPFHDSEPASLF---------- 197
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 209 sleamrtacegakAHILRGPHKQPSlpvlyTLSSQATHEAVHLLCRmlvfDPSKRISAKDALAHPYL 275
Cdd:cd13976   198 -------------AKIRRGQFAIPE-----TLSPRARCLIRSLLRR----EPSERLTAEDILLHPWL 242
pk1 PHA03390
serine/threonine-protein kinase 1; Provisional
73-275 1.23e-08

serine/threonine-protein kinase 1; Provisional


Pssm-ID: 223069 [Multi-domain]  Cd Length: 267  Bit Score: 55.25  E-value: 1.23e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  73 DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKICDFGLARVEELDESRHMTQEvvt 151
Cdd:PHA03390   95 DLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDrAKDRIYLCDYGLCKIIGTPSCYDGTLD--- 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 152 qyYRAPEILMGsRHYSNAIDIWSVGCIFAELLGRRILFQaQSPIQQLDlitdllgtpsLEAMRtacegakahilrgPHKQ 231
Cdd:PHA03390  172 --YFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFK-EDEDEELD----------LESLL-------------KRQQ 224
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392 232 PSLPVLYTLSSQatheAVHLLCRMLVFDPSKR-ISAKDALAHPYL 275
Cdd:PHA03390  225 KKLPFIKNVSKN----ANDFVQSMLKYNINYRlTNYNEIIKHPFL 265
PTKc_Tie1 cd05089
Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; ...
84-183 1.24e-08

Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development.


Pssm-ID: 270671 [Multi-domain]  Cd Length: 297  Bit Score: 55.78  E-value: 1.24e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTqyYRAPEILMGS 163
Cdd:cd05089   116 LTSQQLLQFASDVAKGMQYLSEKQFIHRDLAARNVLVGENLVSKIADFGLSRGEEVYVKKTMGRLPVR--WMAIESLNYS 193
                          90       100
                  ....*....|....*....|
gi 1907080392 164 RhYSNAIDIWSVGCIFAELL 183
Cdd:cd05089   194 V-YTTKSDVWSFGVLLWEIV 212
STKc_RIP2 cd14026
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 2; STKs catalyze ...
28-196 1.26e-08

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP2, also called RICK or CARDIAK, harbors a C-terminal Caspase Activation and Recruitment domain (CARD) belonging to the Death domain (DD) superfamily. It functions as an effector kinase downstream of the pattern recognition receptors from the Nod-like (NLR) family, Nod1 and Nod2, which recognizes bacterial peptidoglycans released upon infection. RIP2 may also be involved in regulating wound healing and keratinocyte proliferation. RIP kinases serve as essential sensors of cellular stress. The RIP2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270928 [Multi-domain]  Cd Length: 284  Bit Score: 55.69  E-value: 1.26e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  28 KRVFRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSD-----LHKIIVSPQPLSSDHVKVfLYQILRGLKY 102
Cdd:cd14026    42 NCLLKEAEILHKARFSYILPILGICNEP-----EFLGIVTEYMTNGslnelLHEKDIYPDVAWPLRLRI-LYEIALGVNY 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 103 LH--SAGILHRDIKPGNLLVNSNCVLKICDFGLA--RVEELDESRHMT--QEVVTQYYRAPEILMGSRHYSNAI--DIWS 174
Cdd:cd14026   116 LHnmSPPLLHHDLKTQNILLDGEFHVKIADFGLSkwRQLSISQSRSSKsaPEGGTIIYMPPEEYEPSQKRRASVkhDIYS 195
                         170       180
                  ....*....|....*....|...
gi 1907080392 175 VGCIFAELLGRRILFQ-AQSPIQ 196
Cdd:cd14026   196 YAIIMWEVLSRKIPFEeVTNPLQ 218
PK_KSR2 cd14153
Pseudokinase domain of Kinase Suppressor of Ras 2; The pseudokinase domain shows similarity to ...
41-192 1.28e-08

Pseudokinase domain of Kinase Suppressor of Ras 2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR2 interacts with the protein phosphatase calcineurin and functions in calcium-mediated ERK signaling. It also functions in energy metabolism by regulating AMP kinase and AMPK-dependent processes such as glucose uptake and fatty acid oxidation. KSR proteins act as scaffold proteins that function downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases. The KSR2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271055 [Multi-domain]  Cd Length: 270  Bit Score: 55.40  E-value: 1.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  41 KHDNVLSALDI-LQPPHIDyfeeiyVVTELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN 117
Cdd:cd14153    54 RHENVVLFMGAcMSPPHLA------IITSLCKGRTLYSVVrdAKVVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKN 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 118 LLVNSNCVLkICDFGLARVEEL-------DESR-------HMTQEVVTQYyrAPEILMGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd14153   128 VFYDNGKVV-ITDFGLFTISGVlqagrreDKLRiqsgwlcHLAPEIIRQL--SPETEEDKLPFSKHSDVFAFGTIWYELH 204

                  ....*....
gi 1907080392 184 GRRILFQAQ 192
Cdd:cd14153   205 AREWPFKTQ 213
STKc_Vps15 cd13980
Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein ...
79-183 1.28e-08

Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein 15; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Vps15 is a large protein consisting of an N-terminal kinase domain, a C-terminal WD-repeat containing domain, and an intermediate bridge domain that contain HEAT repeats. The kinase domain is necessary for the signaling functions of Vps15. Human Vps15 was previously called p150. It associates and regulates Vps34, also called Class III phosphoinositide 3-kinase (PI3K), which catalyzes the phosphorylation of D-myo-phosphatidylinositol (PtdIns). Vps34 is the only PI3K present in yeast. It plays an important role in the regulation of protein and vesicular trafficking and sorting, autophagy, trimeric G-protein signaling, and phagocytosis. The Vps15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270882 [Multi-domain]  Cd Length: 278  Bit Score: 55.34  E-value: 1.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  79 VSPQPLSSDHVKVFL-YQILRGLKYLHSAGILHRDIKPGNLLVNS-NCVLkICDFGLARVEEL------------DESRH 144
Cdd:cd13980    88 ISTRPFLNLIEKKWIaFQLLHALNQCHKRGVCHGDIKTENVLVTSwNWVY-LTDFASFKPTYLpednpadfsyffDTSRR 166
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1907080392 145 MTqevvtqYYRAPEILMGSRHYSN-----------AIDIWSVGCIFAELL 183
Cdd:cd13980   167 RT------CYIAPERFVDALTLDAeserrdgeltpAMDIFSLGCVIAELF 210
PTKc_Syk cd05116
Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the ...
39-181 1.30e-08

Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk is a cytoplasmic (or nonreceptor) PTK containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. It is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for EGFR signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). The Syk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133247 [Multi-domain]  Cd Length: 257  Bit Score: 55.35  E-value: 1.30e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  39 FFKHDNVLSALD---ILQPPHIDYFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIK 114
Cdd:cd05116    43 LLREANVMQQLDnpyIVRMIGICEAESWMLVMEMAElGPLNKFLQKNRHVTEKNITELVHQVSMGMKYLEESNFVHRDLA 122
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 115 PGNLLVNSNCVLKICDFGLARVEELDESRHMTQ---EVVTQYYrAPEIlMGSRHYSNAIDIWSVGCIFAE 181
Cdd:cd05116   123 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQthgKWPVKWY-APEC-MNYYKFSSKSDVWSFGVLMWE 190
STKc_MRCK_alpha cd05623
Catalytic domain of the Serine/Threonine Kinase, DMPK-related cell division control protein 42 ...
84-196 1.31e-08

Catalytic domain of the Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase (MRCK) alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MRCK-alpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. The MRCK-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This alignment model includes the dimerization domain.


Pssm-ID: 270773 [Multi-domain]  Cd Length: 409  Bit Score: 56.18  E-value: 1.31e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILM-- 161
Cdd:cd05623   170 LPEDMARFYLAEMVLAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQam 249
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1907080392 162 --GSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQ 196
Cdd:cd05623   250 edGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 286
PTKc_Tie2 cd05088
Catalytic domain of the Protein Tyrosine Kinase, Tie2; PTKs catalyze the transfer of the ...
84-183 1.37e-08

Catalytic domain of the Protein Tyrosine Kinase, Tie2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor PTK (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. The Tie2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133219 [Multi-domain]  Cd Length: 303  Bit Score: 55.77  E-value: 1.37e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  84 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTqyYRAPEILMGS 163
Cdd:cd05088   121 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--WMAIESLNYS 198
                          90       100
                  ....*....|....*....|
gi 1907080392 164 RHYSNAiDIWSVGCIFAELL 183
Cdd:cd05088   199 VYTTNS-DVWSYGVLLWEIV 217
STKc_TGFbR1_ACVR1b_ACVR1c cd14143
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I ...
94-266 1.47e-08

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I Receptor and Activin Type IB/IC Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR1, also called Activin receptor-Like Kinase 5 (ALK5), functions as a receptor for TGFbeta and phoshorylates SMAD2/3. TGFbeta proteins are cytokines that regulate cell growth, differentiation, and survival, and are critical in the development and progression of many human cancers. Mutations in TGFbR1 (and TGFbR2) can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. ACVR1b (also called ALK4) and ACVR1c (also called ALK7) act as receptors for activin A and B, respectively. TGFbR1, ACVR1b, and ACVR1c belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like TGFbR1, ACVR1b, and ACVR1c, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The TGFbR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271045 [Multi-domain]  Cd Length: 288  Bit Score: 55.53  E-value: 1.47e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  94 YQILRGLKYLH--------SAGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHM--TQEVVTQYYRAPEIL-- 160
Cdd:cd14143    99 LSIASGLAHLHmeivgtqgKPAIAHRDLKSKNILVKKNGTCCIADLGLAvRHDSATDTIDIapNHRVGTKRYMAPEVLdd 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 161 -MGSRHYSN--AIDIWSVGCIFAElLGRRILFQAQSPIQQL---DLITDllgTPSLEAMR-TACEgakaHILRgphkqPS 233
Cdd:cd14143   179 tINMKHFESfkRADIYALGLVFWE-IARRCSIGGIHEDYQLpyyDLVPS---DPSIEEMRkVVCE----QKLR-----PN 245
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1907080392 234 LPVLYTlssqaTHEAVHLLCRML----VFDPSKRISA 266
Cdd:cd14143   246 IPNRWQ-----SCEALRVMAKIMrecwYANGAARLTA 277
K-ycf53 COG5752
Signaling protein combining a Ser/Thr protein kinase domain and the GUN4/Ycf53 ...
54-183 1.55e-08

Signaling protein combining a Ser/Thr protein kinase domain and the GUN4/Ycf53 porphyrin-binding domain [Signal transduction mechanisms];


Pssm-ID: 444462 [Multi-domain]  Cd Length: 466  Bit Score: 56.17  E-value: 1.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  54 PPHIDYFEE---IYVVTELMQSD-LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV-NSNCVLKI 128
Cdd:COG5752   101 PELLAYFEQdqrLYLVQEFIEGQtLAQELEKKGVFSESQIWQLLKDLLPVLQFIHSRNVIHRDIKPANIIRrRSDGKLVL 180
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907080392 129 CDFGLArveeldesRHMTQE--------VVTQYYRAPEILMGSRHYsnAIDIWSVGCIFAELL 183
Cdd:COG5752   181 IDFGVA--------KLLTITallqtgtiIGTPEYMAPEQLRGKVFP--ASDLYSLGVTCIYLL 233
PTKc_Ror2 cd05091
Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor ...
12-183 1.64e-08

Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The Ror2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270673 [Multi-domain]  Cd Length: 284  Bit Score: 55.41  E-value: 1.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  12 VALKKMPNvfQNLVSCKRVFRELKML-CFFKHDNVLSALDIL---QPPHIdyfeeiyVVTELMQSDLHKIIVSPQPLS-- 85
Cdd:cd05091    39 VAIKTLKD--KAEGPLREEFRHEAMLrSRLQHPNIVCLLGVVtkeQPMSM-------IFSYCSHGDLHEFLVMRSPHSdv 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  86 --SDHVKV---------FLY---QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVV 150
Cdd:cd05091   110 gsTDDDKTvkstlepadFLHivtQIAAGMEYLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFReVYAADYYKLMGNSLL 189
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1907080392 151 TQYYRAPEILMGSRhYSNAIDIWSVGCIFAELL 183
Cdd:cd05091   190 PIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVF 221
STKc_NDR1 cd05628
Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1; STKs catalyze ...
63-226 1.69e-08

Catalytic domain of the Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NDR1 (also called STK38) plays a role in proper centrosome duplication. It is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to also act as a tumor suppressor. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. The NDR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270777 [Multi-domain]  Cd Length: 376  Bit Score: 55.82  E-value: 1.69e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  63 IYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA------- 134
Cdd:cd05628    76 LYLIMEFLPGgDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCtglkkah 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 135 RVE---ELDES--------------------RHMTQ----EVVTQYYRAPEILMGSrHYSNAIDIWSVGCIFAELLGRRI 187
Cdd:cd05628   156 RTEfyrNLNHSlpsdftfqnmnskrkaetwkRNRRQlafsTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEMLIGYP 234
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1907080392 188 LFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILR 226
Cdd:cd05628   235 PFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILR 273
PTKc_DDR1 cd05096
Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1; PTKs catalyze ...
95-198 1.72e-08

Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a receptor PTK (RTK) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDR1 results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. The DDR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133227 [Multi-domain]  Cd Length: 304  Bit Score: 55.33  E-value: 1.72e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPE-ILMGSrhYSNAIDI 172
Cdd:cd05096   146 QIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRnLYAGDYYRIQGRAVLPIRWMAWEcILMGK--FTTASDV 223
                          90       100
                  ....*....|....*....|....*.
gi 1907080392 173 WSVGCIFAELLgrrILFQAQsPIQQL 198
Cdd:cd05096   224 WAFGVTLWEIL---MLCKEQ-PYGEL 245
PK_TRB3 cd14024
Pseudokinase domain of Tribbles Homolog 3; The pseudokinase domain shows similarity to protein ...
42-275 1.76e-08

Pseudokinase domain of Tribbles Homolog 3; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB3 binds and regulates ATF4, p65/RelA, and PKB (or Akt). It negatively regulates ATF4-mediated gene expression including that of CHOP (C/EBP homologous protein) and HO-1, which are both involved in modulating apoptosis. It also inhibits insulin-mediated phosphorylation of PKB and is a possible determinant of insulin resistance and related disorders. In osteoarthritic chondrocytes where it inhibits insulin-like growth factor 1-mediated cell survival, TRB3 is overexpressed, resulting in increased cell death. TRB3 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB3 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270926 [Multi-domain]  Cd Length: 242  Bit Score: 54.50  E-value: 1.76e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  42 HDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN 121
Cdd:cd14024    44 HEGVCSVLEVVIGQ-----DRAYAFFSRHYGDMHSHVRRRRRLSEDEARGLFTQMARAVAHCHQHGVILRDLKLRRFVFT 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 122 SNCVLKICDFGLARVEEL---DESrhMTQEVVTQYYRAPEILMGSRHYS-NAIDIWSVG-CIFAELLGrRILFQAQSPIQ 196
Cdd:cd14024   119 DELRTKLVLVNLEDSCPLngdDDS--LTDKHGCPAYVGPEILSSRRSYSgKAADVWSLGvCLYTMLLG-RYPFQDTEPAA 195
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080392 197 QLdlitdllgtpsleamrtacegakAHILRGPHKQPSlpvlyTLSSQATheavHLLCRMLVFDPSKRISAKDALAHPYL 275
Cdd:cd14024   196 LF-----------------------AKIRRGAFSLPA-----WLSPGAR----CLVSCMLRRSPAERLKASEILLHPWL 242
STKc_ACVR2b cd14140
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the ...
98-216 1.98e-08

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2b (or ActRIIB) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2b subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271042 [Multi-domain]  Cd Length: 291  Bit Score: 55.04  E-value: 1.98e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  98 RGLKYLHS-----------AGILHRDIKPGNLLVNSNCVLKICDFGLA-RVEELDESRHMTQEVVTQYYRAPEILMGSRH 165
Cdd:cd14140   103 RGLSYLHEdvprckgeghkPAIAHRDFKSKNVLLKNDLTAVLADFGLAvRFEPGKPPGDTHGQVGTRRYMAPEVLEGAIN 182
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907080392 166 YSN----AIDIWSVGCIFAELLGRriLFQAQSPIQQ--LDLITDLLGTPSLEAMRTA 216
Cdd:cd14140   183 FQRdsflRIDMYAMGLVLWELVSR--CKAADGPVDEymLPFEEEIGQHPSLEDLQEV 237
PTKc_Trk cd05049
Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze ...
32-190 2.13e-08

Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. The Trk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270643 [Multi-domain]  Cd Length: 280  Bit Score: 54.78  E-value: 2.13e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  32 RELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQS-DLHKII--------------VSPQPLS-SDHVKVFLyQ 95
Cdd:cd05049    57 REAELLTNLQHENIVKFYGVCTEG-----DPLLMVFEYMEHgDLNKFLrshgpdaaflasedSAPGELTlSQLLHIAV-Q 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  96 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARveeldesrhmtQEVVTQYYR------------APEILMgS 163
Cdd:cd05049   131 IASGMVYLASQHFVHRDLATRNCLVGTNLVVKIGDFGMSR-----------DIYSTDYYRvgghtmlpirwmPPESIL-Y 198
                         170       180
                  ....*....|....*....|....*....
gi 1907080392 164 RHYSNAIDIWSVGCIFAELL--GRRILFQ 190
Cdd:cd05049   199 RKFTTESDVWSFGVVLWEIFtyGKQPWFQ 227
STKc_CK1 cd14016
Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1; STKs catalyze the ...
95-135 2.18e-08

Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CK1 phosphorylates a variety of substrates including enzymes, transcription and splice factors, cytoskeletal proteins, viral oncogenes, receptors, and membrane-associated proteins. There are mutliple isoforms of CK1 and in mammals, seven isoforms (alpha, beta, gamma1-3, delta, and epsilon) have been characterized. These isoforms differ mainly in the length and structure of their C-terminal non-catalytic region. Some isoforms have several splice variants such as the long (L) and short (S) variants of CK1alpha. CK1 proteins are involved in the regulation of many cellular processes including membrane transport processes, circadian rhythm, cell division, apoptosis, and the development of cancer and neurodegenerative diseases. The CK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270918 [Multi-domain]  Cd Length: 266  Bit Score: 54.77  E-value: 2.18e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLV----NSNcVLKICDFGLAR 135
Cdd:cd14016   104 QMISRLEYLHSKGYIHRDIKPENFLMglgkNSN-KVYLIDFGLAK 147
PLN03224 PLN03224
probable serine/threonine protein kinase; Provisional
89-134 2.53e-08

probable serine/threonine protein kinase; Provisional


Pssm-ID: 178763 [Multi-domain]  Cd Length: 507  Bit Score: 55.46  E-value: 2.53e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1907080392  89 VKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA 134
Cdd:PLN03224  311 IKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAA 356
PTKc_DDR_like cd05097
Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the ...
31-183 2.58e-08

Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor PTKs (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. The DDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133228 [Multi-domain]  Cd Length: 295  Bit Score: 54.60  E-value: 2.58e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  31 FRELKMLCFFKHDNVLSALDILQPPhidyfEEIYVVTELMQSDLHKIIVSPQPLSSDHVKV----------FLY---QIL 97
Cdd:cd05097    65 LKEIKIMSRLKNPNIIRLLGVCVSD-----DPLCMITEYMENGDLNQFLSQREIESTFTHAnnipsvsianLLYmavQIA 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  98 RGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR-VEELDESRHMTQEVVTQYYRAPE-ILMGSrhYSNAIDIWSV 175
Cdd:cd05097   140 SGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRnLYSGDYYRIQGRAVLPIRWMAWEsILLGK--FTTASDVWAF 217

                  ....*...
gi 1907080392 176 GCIFAELL 183
Cdd:cd05097   218 GVTLWEMF 225
STKc_cPKC_alpha cd05615
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs ...
38-192 3.24e-08

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. The cPKC-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270766 [Multi-domain]  Cd Length: 341  Bit Score: 54.62  E-value: 3.24e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392  38 CFFKHDNVLSALDilQPPHIDYF-------EEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 109
Cdd:cd05615    56 CTMVEKRVLALQD--KPPFLTQLhscfqtvDRLYFVMEYVNGgDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHKKGII 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080392 110 HRDIKPGNLLVNSNCVLKICDFGLARveeldesRHMTQEVVTQY------YRAPEILmGSRHYSNAIDIWSVGCIFAELL 183
Cdd:cd05615   134 YRDLKLDNVMLDSEGHIKIADFGMCK-------EHMVEGVTTRTfcgtpdYIAPEII-AYQPYGRSVDWWAYGVLLYEML 205

                  ....*....
gi 1907080392 184 GRRILFQAQ 192
Cdd:cd05615   206 AGQPPFDGE 214
STKc_TTBK cd14017
Catalytic domain of the Serine/Threonine protein kinase, Tau-Tubulin Kinase; STKs catalyze the ...
95-135 3.31e-08

Catalytic domain of the Serine/Threonine protein kinase, Tau-Tubulin Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TTBK is a neuron-specific kinase that phosphorylates the microtubule-associated protein tau and promotes its aggregation. Higher vertebrates contain two TTBK proteins, TTBK1 and TTBK2, both of which have been implicated in neurodegeneration. TTBK1 has been linked to Alzheimer's disease (AD) while TTBK2 is associated with spinocerebellar ataxia type 11 (SCA11). Both AD and SCA11 patients show the presence of neurofibrillary tangles in the brain. The Drosophila TTBK homolog, Asator, is an essential protein that localizes to the mitotic spindle during mitosis and may be involved in regulating microtubule dynamics and function. The TTBK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270919 [Multi-domain]  Cd Length: 263  Bit Score: 54.19  E-value: 3.31e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1907080392  95 QILRGLKYLHSAGILHRDIKPGNLLV---NSNC-VLKICDFGLAR 135
Cdd:cd14017   105 QILKAIEDIHEVGFLHRDVKPSNFAIgrgPSDErTVYILDFGLAR 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH