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Conserved domains on  [gi|2217363338|ref|XP_047275379|]
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ubiquitin carboxyl-terminal hydrolase 45 isoform X2 [Homo sapiens]

Protein Classification

ubiquitin carboxyl-terminal hydrolase( domain architecture ID 13671465)

ubiquitin carboxyl-terminal hydrolase is a C19 family peptidase that deubiquitinates polyubiquitinated target proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidase_C19 super family cl02553
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
191-387 3.89e-38

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


The actual alignment was detected with superfamily member cd02667:

Pssm-ID: 470612 [Multi-domain]  Cd Length: 279  Bit Score: 143.30  E-value: 3.89e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTYTLTDLMNEikesstklkifpssdsqldplvvelsrpgpltsalflflhsmketekgpl 270
Cdd:cd02667     1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE-------------------------------------------------- 30
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 SPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRTeetkriqasilkafnnpttktaddetrkkvkaygkegvkmnFI 350
Cdd:cd02667    31 TPKELFSQVCRKAPQFKGYQQQDSHELLRYLLDGLRT-----------------------------------------FI 69
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2217363338 351 DRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEE 387
Cdd:cd02667    70 DSIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDE 106
Peptidase_C19 super family cl02553
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
603-721 1.68e-32

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


The actual alignment was detected with superfamily member cd02667:

Pssm-ID: 470612 [Multi-domain]  Cd Length: 279  Bit Score: 127.12  E-value: 1.68e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 603 AFQTLS-QSYITTSKECSIQSCLYQFTSMELLMGNNKLLCENCTKnkqkyqeetsfaekkvegvytnARKQLLISAVPAV 681
Cdd:cd02667    95 PFLDLSlPRSDEIKSECSIESCLKQFTEVEILEGNNKFACENCTK----------------------AKKQYLISKLPPV 152
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2217363338 682 LILHLKRFHQAGL-SLRKVNRHVDFPLMLDLAPFCSATCKV 721
Cdd:cd02667   153 LVIHLKRFQQPRSaNLRKVSRHVSFPEILDLAPFCDPKCNS 193
UBP12 super family cl35019
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
191-714 1.91e-18

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG5560:

Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 89.94  E-value: 1.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTYTLTD--LMNEIKESStklkifpssdSQLDPLVVElsrpGPLTSALFLFLHSMKETEKG 268
Cdd:COG5560   267 GLRNLGNTCYMNSALQCLMHTWELRDyfLSDEYEESI----------NEENPLGMH----GSVASAYADLIKQLYDGNLH 332
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 269 PLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRtEETKRIQasILKAFNNPTTKTADDETRKKV-KAYGKEGVKM 347
Cdd:COG5560   333 AFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGLH-EDLNRII--KKPYTSKPDLSPGDDVVVKKKaKECWWEHLKR 409
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 348 N--FIDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERV-SKPLLWGRMNKYRSLRETDHDRYSGNVTIENIHQP 424
Cdd:COG5560   410 NdsIITDLFQGMYKSTLTCPGCGSVSITFDPFMDLTLPLPVSMVwKHTIVVFPESGRRQPLKIELDASSTIRGLKKLVDA 489
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 425 RAAKKHSSSKDKSQLIHDR---------KCIRKLSS--GETVTYQKNEN-------------LEMNGDSLMFASL---MN 477
Cdd:COG5560   490 EYGKLGCFEIKVMCIYYGGnynmlepadKVLLQDIPqtDFVYLYETNDNgievpvvhlriekGYKSKRLFGDPFLqlnVL 569
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 478 SESRLNESPTDDSEKEASHSESNV-DADSEPSesesaskQTGLFRSSSGsgvqPDGPLYPLSAGKllyTKETDSGDKEma 556
Cdd:COG5560   570 IKASIYDKLVKEFEELLVLVEMKKtDVDLVSE-------QVRLLREESS----PSSWLKLETEID---TKREEQVEEE-- 633
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 557 eaiselrlsstvtgdqdfDRENQPLNIsNNLCFLEGKHLRSYSPQNAFQTLSQSyITTSKECSIQSCLYQFTSMELLMGN 636
Cdd:COG5560   634 ------------------GQMNFNDAV-VISCEWEEKRYLSLFSYDPLWTIREI-GAAERTITLQDCLNEFSKPEQLGLS 693
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217363338 637 NKLLCENCTKNKQkyqeetsfaekkvegvytnARKQLLISAVPAVLILHLKRFHQAGLSLRKVNRHVDFPLM-LDLAPF 714
Cdd:COG5560   694 DSWYCPGCKEFRQ-------------------ASKQMELWRLPMILIIHLKRFSSVRSFRDKIDDLVEYPIDdLDLSGV 753
zf-UBP pfam02148
Zn-finger in ubiquitin-hydrolases and other protein;
62-132 9.70e-17

Zn-finger in ubiquitin-hydrolases and other protein;


:

Pssm-ID: 460464  Cd Length: 63  Bit Score: 74.99  E-value: 9.70e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217363338  62 CSECLkerrfydgqlvLTSDIWLCLKCGFQGCGKNSESqHSLKHFKSSRtepHCIIINLSTWIIWCYECDE 132
Cdd:pfam02148   1 CSLCG-----------NTSNLWLCLTCGHVGCGRYQNS-HALEHYEETG---HPLAVNLSTLTVYCYPCDD 56
 
Name Accession Description Interval E-value
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-387 3.89e-38

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 143.30  E-value: 3.89e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTYTLTDLMNEikesstklkifpssdsqldplvvelsrpgpltsalflflhsmketekgpl 270
Cdd:cd02667     1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE-------------------------------------------------- 30
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 SPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRTeetkriqasilkafnnpttktaddetrkkvkaygkegvkmnFI 350
Cdd:cd02667    31 TPKELFSQVCRKAPQFKGYQQQDSHELLRYLLDGLRT-----------------------------------------FI 69
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2217363338 351 DRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEE 387
Cdd:cd02667    70 DSIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDE 106
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
603-721 1.68e-32

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 127.12  E-value: 1.68e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 603 AFQTLS-QSYITTSKECSIQSCLYQFTSMELLMGNNKLLCENCTKnkqkyqeetsfaekkvegvytnARKQLLISAVPAV 681
Cdd:cd02667    95 PFLDLSlPRSDEIKSECSIESCLKQFTEVEILEGNNKFACENCTK----------------------AKKQYLISKLPPV 152
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2217363338 682 LILHLKRFHQAGL-SLRKVNRHVDFPLMLDLAPFCSATCKV 721
Cdd:cd02667   153 LVIHLKRFQQPRSaNLRKVSRHVSFPEILDLAPFCDPKCNS 193
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
190-386 2.08e-20

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 92.51  E-value: 2.08e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 190 RGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDsqldpLVVELSRpgpltsalfLFLHSMKETEKGP 269
Cdd:pfam00443   1 TGLVNLGNTCYMNSVLQSLFSIPPFRDYLLRISPLSEDSRYNKDIN-----LLCALRD---------LFKALQKNSKSSS 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 270 LSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRTEEtkriqasilkafnNPTTKTADDetrkkvkaygkegvkmNF 349
Cdd:pfam00443  67 VSPKMFKKSLGKLNPDFSGYKQQDAQEFLLFLLDGLHEDL-------------NGNHSTENE----------------SL 117
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2217363338 350 IDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIE 386
Cdd:pfam00443 118 ITDLFRGQLKSRLKCLSCGEVSETFEPFSDLSLPIPG 154
UBP12 COG5560
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
191-714 1.91e-18

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 89.94  E-value: 1.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTYTLTD--LMNEIKESStklkifpssdSQLDPLVVElsrpGPLTSALFLFLHSMKETEKG 268
Cdd:COG5560   267 GLRNLGNTCYMNSALQCLMHTWELRDyfLSDEYEESI----------NEENPLGMH----GSVASAYADLIKQLYDGNLH 332
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 269 PLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRtEETKRIQasILKAFNNPTTKTADDETRKKV-KAYGKEGVKM 347
Cdd:COG5560   333 AFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGLH-EDLNRII--KKPYTSKPDLSPGDDVVVKKKaKECWWEHLKR 409
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 348 N--FIDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERV-SKPLLWGRMNKYRSLRETDHDRYSGNVTIENIHQP 424
Cdd:COG5560   410 NdsIITDLFQGMYKSTLTCPGCGSVSITFDPFMDLTLPLPVSMVwKHTIVVFPESGRRQPLKIELDASSTIRGLKKLVDA 489
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 425 RAAKKHSSSKDKSQLIHDR---------KCIRKLSS--GETVTYQKNEN-------------LEMNGDSLMFASL---MN 477
Cdd:COG5560   490 EYGKLGCFEIKVMCIYYGGnynmlepadKVLLQDIPqtDFVYLYETNDNgievpvvhlriekGYKSKRLFGDPFLqlnVL 569
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 478 SESRLNESPTDDSEKEASHSESNV-DADSEPSesesaskQTGLFRSSSGsgvqPDGPLYPLSAGKllyTKETDSGDKEma 556
Cdd:COG5560   570 IKASIYDKLVKEFEELLVLVEMKKtDVDLVSE-------QVRLLREESS----PSSWLKLETEID---TKREEQVEEE-- 633
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 557 eaiselrlsstvtgdqdfDRENQPLNIsNNLCFLEGKHLRSYSPQNAFQTLSQSyITTSKECSIQSCLYQFTSMELLMGN 636
Cdd:COG5560   634 ------------------GQMNFNDAV-VISCEWEEKRYLSLFSYDPLWTIREI-GAAERTITLQDCLNEFSKPEQLGLS 693
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217363338 637 NKLLCENCTKNKQkyqeetsfaekkvegvytnARKQLLISAVPAVLILHLKRFHQAGLSLRKVNRHVDFPLM-LDLAPF 714
Cdd:COG5560   694 DSWYCPGCKEFRQ-------------------ASKQMELWRLPMILIIHLKRFSSVRSFRDKIDDLVEYPIDdLDLSGV 753
zf-UBP pfam02148
Zn-finger in ubiquitin-hydrolases and other protein;
62-132 9.70e-17

Zn-finger in ubiquitin-hydrolases and other protein;


Pssm-ID: 460464  Cd Length: 63  Bit Score: 74.99  E-value: 9.70e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217363338  62 CSECLkerrfydgqlvLTSDIWLCLKCGFQGCGKNSESqHSLKHFKSSRtepHCIIINLSTWIIWCYECDE 132
Cdd:pfam02148   1 CSLCG-----------NTSNLWLCLTCGHVGCGRYQNS-HALEHYEETG---HPLAVNLSTLTVYCYPCDD 56
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
598-716 9.11e-13

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 69.78  E-value: 9.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 598 YSPQNAFQTLSQSYITTSKECSIQSCLYQFTSMELLMGNNKLLCENCTKNKQKYqeetsfaekkvegvytnarKQLLISA 677
Cdd:pfam00443 142 FEPFSDLSLPIPGDSAELKTASLQICFLQFSKLEELDDEEKYYCDKCGCKQDAI-------------------KQLKISR 202
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2217363338 678 VPAVLILHLKRFHQAGLSLRKVNRHVDFPLMLDLAPFCS 716
Cdd:pfam00443 203 LPPVLIIHLKRFSYNRSTWEKLNTEVEFPLELDLSRYLA 241
ZnF_UBP smart00290
Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;
62-122 3.37e-07

Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;


Pssm-ID: 197632  Cd Length: 50  Bit Score: 47.36  E-value: 3.37e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217363338   62 CSECLkerrfydgqlvLTSDIWLCLKCGFQGCGkNSESQHSLKHFKSSRtepHCIIINLST 122
Cdd:smart00290   2 CSVCG-----------TIENLWLCLTCGQVGCG-RYQNGHALEHFEETG---HPLVVKLGT 47
COG5077 COG5077
Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, ...
619-720 1.05e-03

Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227409 [Multi-domain]  Cd Length: 1089  Bit Score: 42.55  E-value: 1.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338  619 SIQSCLYQFTSMELLMGNNKLLCEnctknKQKYQEetsfaekkvegvytnARKQLLISAVPAVLILHLKRFHQAGLS--L 696
Cdd:COG5077    339 NLQESFRRYIQVETLDGDNRYNAE-----KHGLQD---------------AKKGVIFESLPPVLHLQLKRFEYDFERdmM 398
                           90       100
                   ....*....|....*....|....
gi 2217363338  697 RKVNRHVDFPLMLDLAPFCSATCK 720
Cdd:COG5077    399 VKINDRYEFPLEIDLLPFLDRDAD 422
 
Name Accession Description Interval E-value
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-387 3.89e-38

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 143.30  E-value: 3.89e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTYTLTDLMNEikesstklkifpssdsqldplvvelsrpgpltsalflflhsmketekgpl 270
Cdd:cd02667     1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE-------------------------------------------------- 30
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 SPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRTeetkriqasilkafnnpttktaddetrkkvkaygkegvkmnFI 350
Cdd:cd02667    31 TPKELFSQVCRKAPQFKGYQQQDSHELLRYLLDGLRT-----------------------------------------FI 69
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2217363338 351 DRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEE 387
Cdd:cd02667    70 DSIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDE 106
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
603-721 1.68e-32

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 127.12  E-value: 1.68e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 603 AFQTLS-QSYITTSKECSIQSCLYQFTSMELLMGNNKLLCENCTKnkqkyqeetsfaekkvegvytnARKQLLISAVPAV 681
Cdd:cd02667    95 PFLDLSlPRSDEIKSECSIESCLKQFTEVEILEGNNKFACENCTK----------------------AKKQYLISKLPPV 152
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2217363338 682 LILHLKRFHQAGL-SLRKVNRHVDFPLMLDLAPFCSATCKV 721
Cdd:cd02667   153 LVIHLKRFQQPRSaNLRKVSRHVSFPEILDLAPFCDPKCNS 193
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
190-386 2.08e-20

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 92.51  E-value: 2.08e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 190 RGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDsqldpLVVELSRpgpltsalfLFLHSMKETEKGP 269
Cdd:pfam00443   1 TGLVNLGNTCYMNSVLQSLFSIPPFRDYLLRISPLSEDSRYNKDIN-----LLCALRD---------LFKALQKNSKSSS 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 270 LSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRTEEtkriqasilkafnNPTTKTADDetrkkvkaygkegvkmNF 349
Cdd:pfam00443  67 VSPKMFKKSLGKLNPDFSGYKQQDAQEFLLFLLDGLHEDL-------------NGNHSTENE----------------SL 117
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 2217363338 350 IDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIE 386
Cdd:pfam00443 118 ITDLFRGQLKSRLKCLSCGEVSETFEPFSDLSLPIPG 154
UBP12 COG5560
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
191-714 1.91e-18

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 89.94  E-value: 1.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTYTLTD--LMNEIKESStklkifpssdSQLDPLVVElsrpGPLTSALFLFLHSMKETEKG 268
Cdd:COG5560   267 GLRNLGNTCYMNSALQCLMHTWELRDyfLSDEYEESI----------NEENPLGMH----GSVASAYADLIKQLYDGNLH 332
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 269 PLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRtEETKRIQasILKAFNNPTTKTADDETRKKV-KAYGKEGVKM 347
Cdd:COG5560   333 AFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGLH-EDLNRII--KKPYTSKPDLSPGDDVVVKKKaKECWWEHLKR 409
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 348 N--FIDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERV-SKPLLWGRMNKYRSLRETDHDRYSGNVTIENIHQP 424
Cdd:COG5560   410 NdsIITDLFQGMYKSTLTCPGCGSVSITFDPFMDLTLPLPVSMVwKHTIVVFPESGRRQPLKIELDASSTIRGLKKLVDA 489
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 425 RAAKKHSSSKDKSQLIHDR---------KCIRKLSS--GETVTYQKNEN-------------LEMNGDSLMFASL---MN 477
Cdd:COG5560   490 EYGKLGCFEIKVMCIYYGGnynmlepadKVLLQDIPqtDFVYLYETNDNgievpvvhlriekGYKSKRLFGDPFLqlnVL 569
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 478 SESRLNESPTDDSEKEASHSESNV-DADSEPSesesaskQTGLFRSSSGsgvqPDGPLYPLSAGKllyTKETDSGDKEma 556
Cdd:COG5560   570 IKASIYDKLVKEFEELLVLVEMKKtDVDLVSE-------QVRLLREESS----PSSWLKLETEID---TKREEQVEEE-- 633
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 557 eaiselrlsstvtgdqdfDRENQPLNIsNNLCFLEGKHLRSYSPQNAFQTLSQSyITTSKECSIQSCLYQFTSMELLMGN 636
Cdd:COG5560   634 ------------------GQMNFNDAV-VISCEWEEKRYLSLFSYDPLWTIREI-GAAERTITLQDCLNEFSKPEQLGLS 693
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217363338 637 NKLLCENCTKNKQkyqeetsfaekkvegvytnARKQLLISAVPAVLILHLKRFHQAGLSLRKVNRHVDFPLM-LDLAPF 714
Cdd:COG5560   694 DSWYCPGCKEFRQ-------------------ASKQMELWRLPMILIIHLKRFSSVRSFRDKIDDLVEYPIDdLDLSGV 753
zf-UBP pfam02148
Zn-finger in ubiquitin-hydrolases and other protein;
62-132 9.70e-17

Zn-finger in ubiquitin-hydrolases and other protein;


Pssm-ID: 460464  Cd Length: 63  Bit Score: 74.99  E-value: 9.70e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217363338  62 CSECLkerrfydgqlvLTSDIWLCLKCGFQGCGKNSESqHSLKHFKSSRtepHCIIINLSTWIIWCYECDE 132
Cdd:pfam02148   1 CSLCG-----------NTSNLWLCLTCGHVGCGRYQNS-HALEHYEETG---HPLAVNLSTLTVYCYPCDD 56
Peptidase_C19E cd02661
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
619-716 3.01e-16

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239126 [Multi-domain]  Cd Length: 304  Bit Score: 80.01  E-value: 3.01e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 619 SIQSCLYQFTSMELLMGNNKLLCENCTKnkqkyqeetsfaekkvegvYTNARKQLLISAVPAVLILHLKRFhqAGLSLRK 698
Cdd:cd02661   163 SLEDALEQFTKPEQLDGENKYKCERCKK-------------------KVKASKQLTIHRAPNVLTIHLKRF--SNFRGGK 221
                          90
                  ....*....|....*...
gi 2217363338 699 VNRHVDFPLMLDLAPFCS 716
Cdd:cd02661   222 INKQISFPETLDLSPYMS 239
Peptidase_C19 cd02257
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
612-720 5.83e-15

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239072 [Multi-domain]  Cd Length: 255  Bit Score: 75.21  E-value: 5.83e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 612 ITTSKECSIQSCLYQFTSMELLMGNNKLLCENCTKnkqkyqeetsfaekkvegvyTNARKQLLISAVPAVLILHLKRFHQ 691
Cdd:cd02257    93 VKGLPQVSLEDCLEKFFKEEILEGDNCYKCEKKKK--------------------QEATKRLKIKKLPPVLIIHLKRFSF 152
                          90       100       110
                  ....*....|....*....|....*....|
gi 2217363338 692 AGL-SLRKVNRHVDFPLMLDLAPFCSATCK 720
Cdd:cd02257   153 NEDgTKEKLNTKVSFPLELDLSPYLSEGEK 182
Peptidase_C19D cd02660
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
190-392 3.43e-14

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239125 [Multi-domain]  Cd Length: 328  Bit Score: 74.33  E-value: 3.43e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 190 RGITNLGNTCFFNAVMQNLAQTYTLTDLMneikeSSTKLKIFPSSDSQLDPLVVELSRpgpltsaLFLFLHSMKETEkgP 269
Cdd:cd02660     1 RGLINLGATCFMNVILQALLHNPLLRNYF-----LSDRHSCTCLSCSPNSCLSCAMDE-------IFQEFYYSGDRS--P 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 270 LSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRTEETKRiqasilkafnnpttktaddetrkkVKAYGKEGVKMNF 349
Cdd:cd02660    67 YGPINLLYLSWKHSRNLAGYSQQDAHEFFQFLLDQLHTHYGGD------------------------KNEANDESHCNCI 122
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 2217363338 350 IDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERVSKP 392
Cdd:cd02660   123 IHQTFSGSLQSSVTCQRCGGVSTTVDPFLDLSLDIPNKSTPSW 165
Peptidase_C19R cd02674
A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
616-721 5.11e-14

A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239139 [Multi-domain]  Cd Length: 230  Bit Score: 71.94  E-value: 5.11e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 616 KECSIQSCLYQFTSMELLMGNNKLLCENCTKNkqkyqeetsfaekkvegvyTNARKQLLISAVPAVLILHLKRFHQAGLS 695
Cdd:cd02674    82 PKVTLEDCLRLFTKEETLDGDNAWKCPKCKKK-------------------RKATKKLTISRLPKVLIIHLKRFSFSRGS 142
                          90       100
                  ....*....|....*....|....*..
gi 2217363338 696 LRKVNRHVDFPL-MLDLAPFCSATCKV 721
Cdd:cd02674   143 TRKLTTPVTFPLnDLDLTPYVDTRSFT 169
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
598-716 9.11e-13

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 69.78  E-value: 9.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 598 YSPQNAFQTLSQSYITTSKECSIQSCLYQFTSMELLMGNNKLLCENCTKNKQKYqeetsfaekkvegvytnarKQLLISA 677
Cdd:pfam00443 142 FEPFSDLSLPIPGDSAELKTASLQICFLQFSKLEELDDEEKYYCDKCGCKQDAI-------------------KQLKISR 202
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2217363338 678 VPAVLILHLKRFHQAGLSLRKVNRHVDFPLMLDLAPFCS 716
Cdd:pfam00443 203 LPPVLIIHLKRFSYNRSTWEKLNTEVEFPLELDLSRYLA 241
Peptidase_C19D cd02660
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
619-717 1.91e-12

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239125 [Multi-domain]  Cd Length: 328  Bit Score: 68.94  E-value: 1.91e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 619 SIQSCLYQFTSMELLmGNNKLLCENCtknkqkyqeetsfaekkveGVYTNARKQLLISAVPAVLILHLKRF-HQAGLSLR 697
Cdd:cd02660   177 TLSDCLDRFTRPEKL-GDFAYKCSGC-------------------GSTQEATKQLSIKKLPPVLCFQLKRFeHSLNKTSR 236
                          90       100
                  ....*....|....*....|
gi 2217363338 698 KVNRHVDFPLMLDLAPFCSA 717
Cdd:cd02660   237 KIDTYVQFPLELNMTPYTSS 256
Peptidase_C19E cd02661
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
190-384 4.12e-12

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239126 [Multi-domain]  Cd Length: 304  Bit Score: 67.69  E-value: 4.12e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 190 RGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSsdsqldplvvelsrpgpLTSALFLFLHSMKETEKGP 269
Cdd:cd02661     2 AGLQNLGNTCFLNSVLQCLTHTPPLANYLLSREHSKDCCNEGFC-----------------MMCALEAHVERALASSGPG 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 270 LSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAvrteetkrIQASILKAFNNpttktaDDETRKKVKAYgkegvkmNF 349
Cdd:cd02661    65 SAPRIFSSNLKQISKHFRIGRQEDAHEFLRYLLDA--------MQKACLDRFKK------LKAVDPSSQET-------TL 123
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2217363338 350 IDRIFIGELTSTVMCEECANISTVKDPFIDISLPI 384
Cdd:cd02661   124 VQQIFGGYLRSQVKCLNCKHVSNTYDPFLDLSLDI 158
Peptidase_C19A cd02657
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-375 6.86e-11

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239122 [Multi-domain]  Cd Length: 305  Bit Score: 63.89  E-value: 6.86e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLaqtYTLTDLMNEIKESSTKLKifpSSDSQLDPLVVELSRpgpltsalfLFlHSMKETEKgPL 270
Cdd:cd02657     1 GLTNLGNTCYLNSTLQCL---RSVPELRDALKNYNPARR---GANQSSDNLTNALRD---------LF-DTMDKKQE-PV 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 SPKVLFNQLCQKAPRFKDFQ------QQDSQELLhylldavrteetkriqASILKAFNNpttktaddetrkkvkAYGKEG 344
Cdd:cd02657    64 PPIEFLQLLRMAFPQFAEKQnqggyaQQDAEECW----------------SQLLSVLSQ---------------KLPGAG 112
                         170       180       190
                  ....*....|....*....|....*....|.
gi 2217363338 345 VKMNFIDRIFIGELTSTVMCEECANISTVKD 375
Cdd:cd02657   113 SKGSFIDQLFGIELETKMKCTESPDEEEVST 143
peptidase_C19C cd02659
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
619-718 9.83e-11

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239124 [Multi-domain]  Cd Length: 334  Bit Score: 63.82  E-value: 9.83e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 619 SIQSCLYQFTSMELLMGNNKLLCENCtknkqkyqeetsfaEKKVEgvytnARKQLLISAVPAVLILHLKRFHQAGLSLR- 697
Cdd:cd02659   152 NLEESLDAYVQGETLEGDNKYFCEKC--------------GKKVD-----AEKGVCFKKLPPVLTLQLKRFEFDFETMMr 212
                          90       100
                  ....*....|....*....|..
gi 2217363338 698 -KVNRHVDFPLMLDLAPFCSAT 718
Cdd:cd02659   213 iKINDRFEFPLELDMEPYTEKG 234
Peptidase_C19O cd02671
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
187-391 6.51e-10

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239136 [Multi-domain]  Cd Length: 332  Bit Score: 61.45  E-value: 6.51e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 187 LSVRGITNLGNTCFFNAVMQNLaqtYTLTDLMNEIKESSTKLkifpSSDSQLdplvvelsrpgpltSALFLFLHSMKETE 266
Cdd:cd02671    22 LPFVGLNNLGNTCYLNSVLQVL---YFCPGFKHGLKHLVSLI----SSVEQL--------------QSSFLLNPEKYNDE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 267 KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRteetkriqasilkafnnpttktaddetrkkvkaygkegvk 346
Cdd:cd02671    81 LANQAPRRLLNALREVNPMYEGYLQHDAQEVLQCILGNIQ---------------------------------------- 120
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 2217363338 347 mNFIDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERVSK 391
Cdd:cd02671   121 -ELVEKDFQGQLVLRTRCLECETFTERREDFQDISVPVQESELSK 164
Peptidase_C19G cd02663
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-384 2.98e-09

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239128 [Multi-domain]  Cd Length: 300  Bit Score: 58.86  E-value: 2.98e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQT---YTLTDLMNEIKESSTKLkifpssdsqldplvvelsrpgpltsalflflhsmketek 267
Cdd:cd02663     1 GLENFGNTCYCNSVLQALYFEnllTCLKDLFESISEQKKRT--------------------------------------- 41
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 268 GPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLdavrteetkriqasilkafnNPTTKTADDEtRKKVKAYGKEGVKM 347
Cdd:cd02663    42 GVISPKKFITRLKRENELFDNYMHQDAHEFLNFLL--------------------NEIAEILDAE-RKAEKANRKLNNNN 100
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 2217363338 348 ------NFIDRIFIGELTSTVMCEECANISTVKDPFIDISLPI 384
Cdd:cd02663   101 naepqpTWVHEIFQGILTNETRCLTCETVSSRDETFLDLSIDV 143
Peptidase_C19H cd02664
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-402 4.31e-09

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239129 [Multi-domain]  Cd Length: 327  Bit Score: 58.66  E-value: 4.31e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTytlTDLMNEIkessTKLKIFPSSDSQLDPLVVELsrpgpltsaLFLFLHSMKETEKGPl 270
Cdd:cd02664     1 GLINLGNTCYMNSVLQALFMA---KDFRRQV----LSLNLPRLGDSQSVMKKLQL---------LQAHLMHTQRRAEAP- 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 sPKVLFNQlcQKAPRFKDFQQQDSQELLHYLLDAVRTeetkriqasilkafnnpttktaddetrkkvkaygkegvkmnFI 350
Cdd:cd02664    64 -PDYFLEA--SRPPWFTPGSQQDCSEYLRYLLDRLHT-----------------------------------------LI 99
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217363338 351 DRIFIGELTSTVMCEECANISTVKD--PFIDISLP----IIEERVSKPLLWGRmNKYR 402
Cdd:cd02664   100 EKMFGGKLSTTIRCLNCNSTSARTErfRDLDLSFPsvqdLLNYFLSPEKLTGD-NQYY 156
Peptidase_C19 cd02257
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
191-384 4.55e-09

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239072 [Multi-domain]  Cd Length: 255  Bit Score: 57.88  E-value: 4.55e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAqtytltdlmneikesstklkifpssdsqldplvvelsrpgpltsalflflhsmketekgpl 270
Cdd:cd02257     1 GLNNLGNTCYLNSVLQALF------------------------------------------------------------- 19
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 spkvlfnqlcqkaprfkdFQQQDSQELLHYLLDAVRTEETKRIQASILKAFNNpttktaddetrkkvkaygkegvkmNFI 350
Cdd:cd02257    20 ------------------SEQQDAHEFLLFLLDKLHEELKKSSKRTSDSSSLK------------------------SLI 57
                         170       180       190
                  ....*....|....*....|....*....|....
gi 2217363338 351 DRIFIGELTSTVMCEECANISTVKDPFIDISLPI 384
Cdd:cd02257    58 HDLFGGKLESTIVCLECGHESVSTEPELFLSLPL 91
Peptidase_C19G cd02663
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
616-711 3.01e-08

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239128 [Multi-domain]  Cd Length: 300  Bit Score: 55.78  E-value: 3.01e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 616 KECSIQSCLYQFTSMELLMGNNKLLCENCtknkQKYQEetsfaekkvegvytnARKQLLISAVPAVLILHLKRFHQAGls 695
Cdd:cd02663   145 QNTSITSCLRQFSATETLCGRNKFYCDEC----CSLQE---------------AEKRMKIKKLPKILALHLKRFKYDE-- 203
                          90       100
                  ....*....|....*....|..
gi 2217363338 696 lrKVNRH------VDFPLMLDL 711
Cdd:cd02663   204 --QLNRYiklfyrVVFPLELRL 223
peptidase_C19C cd02659
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-384 4.55e-08

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239124 [Multi-domain]  Cd Length: 334  Bit Score: 55.73  E-value: 4.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLaqtYTLTDLMNEIkesstkLKIFPSSDSQLDPlvvelSRPGPLTSaLFLFLHSMKEtekgpl 270
Cdd:cd02659     4 GLKNQGATCYMNSLLQQL---YMTPEFRNAV------YSIPPTEDDDDNK-----SVPLALQR-LFLFLQLSES------ 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 spKVLFNQLCQKAPRFKD-----FQQQDSQELLHYLLDAVRTeetkriqasilkafnnpttktaddetrkKVKAYGKEGV 345
Cdd:cd02659    63 --PVKTTELTDKTRSFGWdslntFEQHDVQEFFRVLFDKLEE----------------------------KLKGTGQEGL 112
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 2217363338 346 kmnfIDRIFIGELTSTVMCEECANISTVKDPFIDISLPI 384
Cdd:cd02659   113 ----IKNLFGGKLVNYIICKECPHESEREEYFLDLQVAV 147
Peptidase_C19L cd02668
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
587-715 7.46e-08

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239133 [Multi-domain]  Cd Length: 324  Bit Score: 54.73  E-value: 7.46e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 587 LCFLEGKHLRSYSP--QNAFQTLSQ---SYITTSKEC---------------------SIQSCLYQFTSMELLMGNNKLL 640
Cdd:cd02668    99 LSLLEAKLSKSKNPdlKNIVQDLFRgeySYVTQCSKCgresslpskfyelelqlkghkTLEECIDEFLKEEQLTGDNQYF 178
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217363338 641 CENCTKNkqkyqeetsfaekkvegvyTNARKQLLISAVPAVLILHLKR--FHQAGLSLRKVNRHVDFPLMLDLAPFC 715
Cdd:cd02668   179 CESCNSK-------------------TDATRRIRLTTLPPTLNFQLLRfvFDRKTGAKKKLNASISFPEILDMGEYL 236
ZnF_UBP smart00290
Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;
62-122 3.37e-07

Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;


Pssm-ID: 197632  Cd Length: 50  Bit Score: 47.36  E-value: 3.37e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217363338   62 CSECLkerrfydgqlvLTSDIWLCLKCGFQGCGkNSESQHSLKHFKSSRtepHCIIINLST 122
Cdd:smart00290   2 CSVCG-----------TIENLWLCLTCGQVGCG-RYQNGHALEHFEETG---HPLVVKLGT 47
Peptidase_C19R cd02674
A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-392 1.71e-06

A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239139 [Multi-domain]  Cd Length: 230  Bit Score: 49.59  E-value: 1.71e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQtytltdlmneikesstklkifpssdsqldplvvelsrpgpltsalflflhsmketekgpl 270
Cdd:cd02674     1 GLRNLGNTCYMNSILQCLSA------------------------------------------------------------ 20
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 271 spkvlfnqlcqkaprfkdfQQQDSQELLHYLLDAVRteetkriqasilkafnnpttktaddetrkkvkaygkegvkmNFI 350
Cdd:cd02674    21 -------------------DQQDAQEFLLFLLDGLH-----------------------------------------SII 40
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 2217363338 351 DRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERVSKP 392
Cdd:cd02674    41 VDLFQGQLKSRLTCLTCGKTSTTFEPFTYLSLPIPSGSGDAP 82
Peptidase_C19B cd02658
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-321 1.75e-06

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239123 [Multi-domain]  Cd Length: 311  Bit Score: 50.40  E-value: 1.75e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSD--SQLDPLVVEL-----SRPGPLTSalflflhSMK 263
Cdd:cd02658     1 GLRNLGNSCYLNSVLQVLFSIPSFQWRYDDLENKFPSDVVDPANDlnCQLIKLADGLlsgrySKPASLKS-------END 73
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217363338 264 ETEKGpLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVRTEETKRIQASILKAF 321
Cdd:cd02658    74 PYQVG-IKPSMFKALIGKGHPEFSTMRQQDALEFLLHLIDKLDRESFKNLGLNPNDLF 130
Peptidase_C19O cd02671
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
626-711 6.74e-06

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239136 [Multi-domain]  Cd Length: 332  Bit Score: 48.74  E-value: 6.74e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 626 QFTSMELLMGNNKLLCENCTKnkqkyqeetsfaekkvegvYTNARKQLLISAVPAVLILHLKRFHQAGLS------LRKV 699
Cdd:cd02671   188 QFASVERIVGEDKYFCENCHH-------------------YTEAERSLLFDKLPEVITIHLKCFAANGSEfdcyggLSKV 248
                          90
                  ....*....|..
gi 2217363338 700 NRHVDFPLMLDL 711
Cdd:cd02671   249 NTPLLTPLKLSL 260
Peptidase_C19A cd02657
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
648-719 1.33e-04

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239122 [Multi-domain]  Cd Length: 305  Bit Score: 44.63  E-value: 1.33e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217363338 648 KQKYQEETsfaEKKVEGVYTNA--RKQLLISAVPAVLILHLKRFHQAGLSLR--KVNRHVDFPLMLDLAPFCSATC 719
Cdd:cd02657   167 KKGLEEEI---EKHSPTLGRDAiyTKTSRISRLPKYLTVQFVRFFWKRDIQKkaKILRKVKFPFELDLYELCTPSG 239
Peptidase_C19L cd02668
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
191-384 1.46e-04

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239133 [Multi-domain]  Cd Length: 324  Bit Score: 44.72  E-value: 1.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 191 GITNLGNTCFFNAVMQNLaqtYTLTDLMN-----EIKESSTKLKIFPSSDSQLDPLVVELSRpgpltsaLFLFLHSmkeT 265
Cdd:cd02668     1 GLKNLGATCYVNSFLQLW---FMNLEFRKavyecNSTEDAELKNMPPDKPHEPQTIIDQLQL-------IFAQLQF---G 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 266 EKGPLSPKVLFNQLcqkapRFKDFQQQDSQELLHYLLDAvrteetkrIQASILKAFNNpttktaddetrkKVKaygkegv 345
Cdd:cd02668    68 NRSVVDPSGFVKAL-----GLDTGQQQDAQEFSKLFLSL--------LEAKLSKSKNP------------DLK------- 115
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 2217363338 346 kmNFIDRIFIGELTSTVMCEECANISTVKDPFIDISLPI 384
Cdd:cd02668   116 --NIVQDLFRGEYSYVTQCSKCGRESSLPSKFYELELQL 152
Peptidase_C19H cd02664
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
618-711 2.42e-04

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239129 [Multi-domain]  Cd Length: 327  Bit Score: 44.02  E-value: 2.42e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338 618 CSIQSCLYQFTSMELLMGNNKLLCENCTKNKQkyqeetsfAEKKVEgvytnarkqllISAVPAVLILHLKRFH--QAGLS 695
Cdd:cd02664   134 PSVQDLLNYFLSPEKLTGDNQYYCEKCASLQD--------AEKEMK-----------VTGAPEYLILTLLRFSydQKTHV 194
                          90
                  ....*....|....*.
gi 2217363338 696 LRKVNRHVDFPLMLDL 711
Cdd:cd02664   195 REKIMDNVSINEVLSL 210
COG5077 COG5077
Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, ...
619-720 1.05e-03

Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227409 [Multi-domain]  Cd Length: 1089  Bit Score: 42.55  E-value: 1.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217363338  619 SIQSCLYQFTSMELLMGNNKLLCEnctknKQKYQEetsfaekkvegvytnARKQLLISAVPAVLILHLKRFHQAGLS--L 696
Cdd:COG5077    339 NLQESFRRYIQVETLDGDNRYNAE-----KHGLQD---------------AKKGVIFESLPPVLHLQLKRFEYDFERdmM 398
                           90       100
                   ....*....|....*....|....
gi 2217363338  697 RKVNRHVDFPLMLDLAPFCSATCK 720
Cdd:COG5077    399 VKINDRYEFPLEIDLLPFLDRDAD 422
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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