|
Name |
Accession |
Description |
Interval |
E-value |
| HkD_NuMA |
cd22224 |
Hook domain found in nuclear mitotic apparatus protein (NuMA) and similar proteins; NuMA, also ... |
6-152 |
4.15e-58 |
|
Hook domain found in nuclear mitotic apparatus protein (NuMA) and similar proteins; NuMA, also called nuclear mitotic apparatus protein 1, or nuclear matrix protein-22 (NMP-22), or SP-H antigen, is a microtubule (MT)-binding protein that plays a role in the formation and maintenance of the spindle poles, and the alignment and segregation of chromosomes during mitotic cell division. The model corresponds to the N-terminal conserved globular Hook domain of NuMA, which folds as a variant of the helical calponin homology (CH) domain. It directly binds dynein light intermediate chains LIC1 and LIC2 through a conserved hydrophobic patch shared among other Hook adaptors.
Pssm-ID: 411795 Cd Length: 148 Bit Score: 197.41 E-value: 4.15e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 6 TRGAALLSWVNSLHVADPVEAVLQLQDCSIFIKIIDRIHGTEEGQQILKQPVSERLDFVCSFLQKNRKHPSSPECLVSAQ 85
Cdd:cd22224 2 TKAEALLSWVNSLKLDDPIESISQLQDGTILLKIIYKLKGEEEEEQILDLSVEERLEFISSFLEGDCRFNSSQGTLVSWQ 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217283087 86 KVLEG--SELELAKMTMLLLYHSTMSSKSPrdWEQFEYKIQAELAVILKFVLDHEDGLNLNEDLENFLQ 152
Cdd:cd22224 82 KILQGenLELELAKVLLLLLYHSMMNNNLT--LEKLDYKTELELASILRFVLDNEDGLYLSEGLDKFLT 148
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
215-911 |
4.18e-27 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 120.93 E-value: 4.18e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRL--ALLNEKQAASPLE------PKELEELRDKNE 286
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELqkELYALANEISRLEqqkqilRERLANLERQLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 287 SLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEH---SKATQEWLEKQAQLE 363
Cdd:TIGR02168 320 ELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLetlRSKVAQLELQIASLN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 364 KELSAALQDKKCLEEKNEILQgklSQLEEHLSQLQDNPPQEKGEvlgdvlQLETLKQEAATLAANNTQLQARVEMLETER 443
Cdd:TIGR02168 400 NEIERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQA------ELEELEEELEELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 444 GQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGAR-LTAQVASLTSEL-----TTLNATIQ-- 515
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILgVLSELISVDEGYeaaieAALGGRLQav 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 516 ------QQDQELAGLKQQAKEK-------QAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQ----------QLKEVAE 572
Cdd:TIGR02168 551 vvenlnAAKKAIAFLKQNELGRvtflpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKlrkalsyllgGVLVVDD 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 573 KQEATRQ----DHAQQLAT--------------AAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSA 634
Cdd:TIGR02168 631 LDNALELakklRPGYRIVTldgdlvrpggvitgGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEEL 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 635 QTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKAT------------------EKERVAQE 696
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEeleerleeaeeelaeaeaEIEELEAQ 790
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 697 KDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEaRLQQLGE 776
Cdd:TIGR02168 791 IEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIE-ELEELIE 869
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 777 AHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERyedsqqeeaqygamfqeqLMTLKEECEKARQELQEAKEKV 856
Cdd:TIGR02168 870 ELESELEALLNERASLEEALALLRSELEELSEELRELESK------------------RSELRRELEELREKLAQLELRL 931
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217283087 857 AGIeshsELQISRQQNELAELHA-NLARALQQVQEKEVRAQKLADDLSTLQEKMAA 911
Cdd:TIGR02168 932 EGL----EVRIDNLQERLSEEYSlTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
563-1331 |
4.47e-27 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 120.93 E-value: 4.47e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 563 KEQQLKEVAEKQEATRQDHAQQLATAAEEREASL----RERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSV 638
Cdd:TIGR02168 169 KYKERRKETERKLERTRENLDRLEDILNELERQLksleRQAEKAERYKELKAELRELELALLVLRLEELREELEELQEEL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 639 TQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLrseQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSL 718
Cdd:TIGR02168 249 KEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL---YALANEISRLEQQKQILRERLANLERQLEELEAQL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 719 EEEKRR---AADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLgeahQAETEVLRRELAEAMAA 795
Cdd:TIGR02168 326 EELESKldeLAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETL----RSKVAQLELQIASLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 796 QHTAESECEQLVKEVAAWRERYEDSQQEeaqygaMFQEQLMTLKEECEKARQELQEAKEKVAGIEShselQISRQQNELA 875
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKK------LEEAELKELQAELEELEEELEELQEELERLEE----ALEELREELE 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 876 ELHANLARALQQVQEKEVRA---QKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASR-ELVKEPARAGDRQPEW 951
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLdslERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyEAAIEAALGGRLQAVV 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 952 LEeqqgrqfcSTQAALQAMEREAEQmgnelERLRAALMEsqGQQQEERGQQEREVARLTQERGRAQADLALEKAArAELE 1031
Cdd:TIGR02168 552 VE--------NLNAAKKAIAFLKQN-----ELGRVTFLP--LDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFD-PKLR 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1032 MRLQNALNEQRVeFATLQEALAHALTEKEG-----KDQELAKLRGLEA-----------AQIKELEELRQTVKQLKEQLA 1095
Cdd:TIGR02168 616 KALSYLLGGVLV-VDDLDNALELAKKLRPGyrivtLDGDLVRPGGVITggsaktnssilERRREIEELEEKIEELEEKIA 694
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1096 KKEKEHASGSGAQSE-------AAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQ 1168
Cdd:TIGR02168 695 ELEKALAELRKELEEleeeleqLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAE 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1169 GQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGES 1248
Cdd:TIGR02168 775 EELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDI 854
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1249 KELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLReEAEKQRVASENLRQELTSQAERAEELGQE 1328
Cdd:TIGR02168 855 ESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELR-ELESKRSELRRELEELREKLAQLELRLEG 933
|
...
gi 2217283087 1329 LKA 1331
Cdd:TIGR02168 934 LEV 936
|
|
| NuMA_LGNBD |
cd22298 |
LGN binding domain (LGNBD) of nuclear mitotic apparatus protein (NuMA) and similar proteins; ... |
1874-1932 |
1.14e-26 |
|
LGN binding domain (LGNBD) of nuclear mitotic apparatus protein (NuMA) and similar proteins; NuMA, also called nuclear matrix protein-22 (NMP-22), nuclear mitotic apparatus protein 1 (NUMA1), or SP-H antigen, is a microtubule (MT)-binding protein that plays a role in the formation and maintenance of spindle poles and the alignment and segregation of chromosomes during mitotic cell division. It is involved in the establishment of mitotic spindle orientation during metaphase, and elongation during anaphase in a dynein-dynactin-dependent manner. NuMA, in complex with LGN, forms NuMA:LGN hetero-hexamers that promote spindle orientation. The model corresponds to the LGN binding domain (LGNBD) of NuMA. LGN (named for leu-gly-asn repeats) is also known as G protein signaling modulator 2.
Pssm-ID: 412093 Cd Length: 56 Bit Score: 104.22 E-value: 1.14e-26
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217283087 1874 LLSLPGYRPTTRSSARRSQagvSSGAPPGRNSFYMGTCQDEPEQLDDWNRIAELQQRNR 1932
Cdd:cd22298 1 LLSLPGYRPSTRSSTRRSQ---SSSATGGRSTFYMGTCQDEPEHLDDWNRIAELQQRNR 56
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
559-1326 |
1.77e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 115.92 E-value: 1.77e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 559 SLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSV 638
Cdd:TIGR02168 204 SLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 639 TQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSL 718
Cdd:TIGR02168 284 EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEEL 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 719 EEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLgeahQAETEVLRRELAEamAAQHT 798
Cdd:TIGR02168 364 EAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERL----QQEIEELLKKLEE--AELKE 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 799 AESECEQLVKEVAAWRERYEDsqqeeaqygamFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNelaelH 878
Cdd:TIGR02168 438 LQAELEELEEELEELQEELER-----------LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN-----L 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 879 ANLARALQQVQEKevrAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVK------EPARAGDRQPEWL 952
Cdd:TIGR02168 502 EGFSEGVKALLKN---QSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKkaiaflKQNELGRVTFLPL 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 953 EEQQGRQFCSTQAALQAMEREAEQMGNELE----RLRAAL------------MESQGQQQEERGQQEREV---------- 1006
Cdd:TIGR02168 579 DSIKGTEIQGNDREILKNIEGFLGVAKDLVkfdpKLRKALsyllggvlvvddLDNALELAKKLRPGYRIVtldgdlvrpg 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1007 ----------ARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQ 1076
Cdd:TIGR02168 659 gvitggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARL 738
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1077 IKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERAS 1156
Cdd:TIGR02168 739 EAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE 818
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1157 RAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSI 1236
Cdd:TIGR02168 819 AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE 898
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1237 LNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQrvaSENLRQELT 1316
Cdd:TIGR02168 899 LSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDD---EEEARRRLK 975
|
810
....*....|
gi 2217283087 1317 SQAERAEELG 1326
Cdd:TIGR02168 976 RLENKIKELG 985
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
470-1095 |
2.63e-25 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 115.03 E-value: 2.63e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 470 DLQSSISNLSQAKEELEQASQAHgARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGL 549
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAEL-EELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDI 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 550 RHQVEQLsSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANE 629
Cdd:COG1196 305 ARLEERR-RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 630 ARDSAQtsvtQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKE 709
Cdd:COG1196 384 LAEELL----EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 710 SLKVTKGSLEEEKRRAADALEEQQRCISELKAEtrslveqhkrerkeleeeragrkgLEARLQQLGEAHQAETEVLRREL 789
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAAR------------------------LLLLLEAEADYEGFLEGVKAALL 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 790 AEAMAAQHtaeseceQLVKEVAAWRERYEDSQQEEAqyGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISR 869
Cdd:COG1196 516 LAGLRGLA-------GAVAVLIGVEAAYEAALEAAL--AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARA 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 870 QQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAgdrqp 949
Cdd:COG1196 587 ALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS----- 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 950 ewleeqqgrqfcSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAE 1029
Cdd:COG1196 662 ------------LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQ 729
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217283087 1030 LEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEA----------AQIKELEELRQTVKQLKEQLA 1095
Cdd:COG1196 730 LEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEReiealgpvnlLAIEEYEELEERYDFLSEQRE 805
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
215-937 |
3.33e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 114.77 E-value: 3.33e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 215 QMRRLKKQ------LADERSNRDELELELAENRKL-----LTEKDAQIAMMQQRIDRL-ALLNEKQAasplepkELEELR 282
Cdd:TIGR02168 201 QLKSLERQaekaerYKELKAELRELELALLVLRLEelreeLEELQEELKEAEEELEELtAELQELEE-------KLEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 283 DKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEEngdlsfklrefASHLQQLQDALNELTEEHSKATQEWLEKQAQL 362
Cdd:TIGR02168 274 LEVSELEEEIEELQKELYALANEISRLEQQKQILRER-----------LANLERQLEELEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 363 EKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETE 442
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 443 RGQ-----QEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGArLTAQVASLTSELTTLNATIQQQ 517
Cdd:TIGR02168 423 IEEllkklEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDA-AERELAQLQARLDSLERLQENL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 518 DQELAGLKQQAKEKqaqlaqtlqqqeqasQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLR 597
Cdd:TIGR02168 502 EGFSEGVKALLKNQ---------------SGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 598 ERDAALKQLEALEKEKAAKLEILQ-QQLQVANEARDSAQTSVTQAQREKAELS------RKVEELQACVETARQEQHEAQ 670
Cdd:TIGR02168 567 QNELGRVTFLPLDSIKGTEIQGNDrEILKNIEGFLGVAKDLVKFDPKLRKALSyllggvLVVDDLDNALELAKKLRPGYR 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 671 AQVAELELQLR-------------SEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGS---LEEEKRRAADALEEQQR 734
Cdd:TIGR02168 647 IVTLDGDLVRPggvitggsaktnsSILERRREIEELEEKIEELEEKIAELEKALAELRKEleeLEEELEQLRKELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 735 CISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLgeahQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWR 814
Cdd:TIGR02168 727 QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL----EERLEEAEEELAEAEAEIEELEAQIEQLKEELKALR 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 815 ERYEDSQQEEAQYGAMFQEQLMTLK------EECEKARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQV 888
Cdd:TIGR02168 803 EALDELRAELTLLNEEAANLRERLEslerriAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNER 882
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 2217283087 889 QEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASREL 937
Cdd:TIGR02168 883 ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRL 931
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
597-1194 |
5.75e-25 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 113.88 E-value: 5.75e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 597 RERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAEL 676
Cdd:COG1196 207 RQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 677 ELQLRSEQQkatEKERVAQEKDQLQEQLQALKESLKvtkgSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKE 756
Cdd:COG1196 287 QAEEYELLA---ELARLEQDIARLEERRRELEERLE----ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 757 LEEERAGRKGLEARLQQLgeahQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYgamfQEQLM 836
Cdd:COG1196 360 LAEAEEALLEAEAELAEA----EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL----EEALA 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 837 TLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELAELhANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEV 916
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA-ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGV 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 917 ARLETLVRKAGEQQETASRELVKEPARAGDRQPEwLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALMESQGQQQ 996
Cdd:COG1196 511 KAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL-AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALA 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 997 EERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQ 1076
Cdd:COG1196 590 AALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRE 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1077 IKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRteptgpKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERAS 1156
Cdd:COG1196 670 LLAALLEAEAELEELAERLAEEELELEEALLAEEEEER------ELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
570 580 590
....*....|....*....|....*....|....*...
gi 2217283087 1157 RAERDSALETLQGQLEEKAQELghsQSALASAQRELAA 1194
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEEL---ERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1023-1642 |
7.75e-24 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 110.03 E-value: 7.75e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1023 EKAARA-ELEMRLQNALNEQRV-EFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQL-AKKEK 1099
Cdd:COG1196 210 EKAERYrELKEELKELEAELLLlKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELeEAQAE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1100 EHASGSgaqseaagrteptgpKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQELG 1179
Cdd:COG1196 290 EYELLA---------------ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1180 HSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKrlvmAES 1259
Cdd:COG1196 355 EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELE----EAL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1260 EKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKawqekffqk 1339
Cdd:COG1196 431 AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEA--------- 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1340 eqalstlQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSkqAAGGLRAELLRAQRELGELIPLRQKVAEQ 1419
Cdd:COG1196 502 -------DYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA--LAAALQNIVVEDDEVAAAAIEYLKAAKAG 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1420 ERTAQQLRAEKASYAEQlsmlkkahgllAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQ 1499
Cdd:COG1196 573 RATFLPLDKIRARAALA-----------AALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVT 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1500 STARELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQL 1579
Cdd:COG1196 642 LAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEEL 721
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217283087 1580 NELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQeqlrSLEQLQKENKELRAEAERLG 1642
Cdd:COG1196 722 EEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPP----DLEELERELERLEREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
215-774 |
1.40e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 106.17 E-value: 1.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALlnekqaasplepkELEELRDKNESLTMRLHE 294
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELEL-------------ELEEAQAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 295 TLKQCQDLKTEKSQMDRKINQLSEEngdlsfkLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQLEKELSAALQDKK 374
Cdd:COG1196 300 LEQDIARLEERRRELEERLEELEEE-------LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 375 CLEEKNEILQGKLSQLEEHLSQLQDnppqekgevlgDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAER 454
Cdd:COG1196 373 ELAEAEEELEELAEELLEALRAAAE-----------LAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 455 GHFEEEKQQLSSLITDLQSSISNLSQAKEELEQAsQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQ 534
Cdd:COG1196 442 EALEEAAEEEAELEEEEEALLELLAELLEEAALL-EAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 535 -------------LAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEvAEKQEATRQDHAQQLATAAEEREASLRERDA 601
Cdd:COG1196 521 glagavavligveAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKA-AKAGRATFLPLDKIRARAALAAALARGAIGA 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 602 ALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLR 681
Cdd:COG1196 600 AVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEA 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 682 SEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEER 761
Cdd:COG1196 680 ELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP 759
|
570
....*....|...
gi 2217283087 762 AGRKGLEARLQQL 774
Cdd:COG1196 760 PDLEELERELERL 772
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1150-1685 |
9.41e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 103.48 E-value: 9.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1150 LEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISS 1229
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1230 LEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETAsnsaRAAERSSALREEVQSLREEAEKQRVASE 1309
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELA----EAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1310 NLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSK 1389
Cdd:COG1196 390 EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELL 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1390 QAAGGLRAELLRAQRELGELIPlRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRG-------LGERANLGR 1462
Cdd:COG1196 470 EEAALLEAALAELLEELAEAAA-RLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVeaayeaaLEAALAAAL 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1463 QFLEVELDQAREKYVQELAAVRADAETRL---AEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVEE 1539
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLKAAKAGRATFLpldKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1540 LSKKLADSDQASKVQQQKLKAVQAQGGESQ-------QEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQ 1612
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAggsltggSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217283087 1613 QNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGK 1685
Cdd:COG1196 709 LAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
783-1642 |
3.27e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 101.67 E-value: 3.27e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 783 EVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQygamfqeqlmtLKEECEKARQELQEAKEKVAGIESh 862
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSE-----------LEEEIEELQKELYALANEISRLEQ- 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 863 selQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRelvkepa 942
Cdd:TIGR02168 303 ---QKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELES------- 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 943 RAGDRQPEWLEEqqgrqfcstQAALQAMEREAEQMGNELERLRAALmesqgqqqeerGQQEREVARLTQErgRAQADLAL 1022
Cdd:TIGR02168 373 RLEELEEQLETL---------RSKVAQLELQIASLNNEIERLEARL-----------ERLEDRRERLQQE--IEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1023 EKAARAELEMRlqnaLNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHA 1102
Cdd:TIGR02168 431 EEAELKELQAE----LEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSE 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1103 SGSGAQSEAAGRTEPTGPKLE--------------ALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETlq 1168
Cdd:TIGR02168 507 GVKALLKNQSGLSGILGVLSElisvdegyeaaieaALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGT-- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1169 gQLEEKAQELGHSQSALASAQRELAAFRTKVQdhsKAEDEWKAQV--------ARGRQEAERKNSLISSLEEEVsILNRQ 1240
Cdd:TIGR02168 585 -EIQGNDREILKNIEGFLGVAKDLVKFDPKLR---KALSYLLGGVlvvddldnALELAKKLRPGYRIVTLDGDL-VRPGG 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1241 VLEKEGESKELKRLvmAESEKSQKLEERLRLLQAETASNSARAAErssaLREEVQSLREEAEKQRVASENLRQELTSQAE 1320
Cdd:TIGR02168 660 VITGGSAKTNSSIL--ERRREIEELEEKIEELEEKIAELEKALAE----LRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1321 RAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELL 1400
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1401 RaqrelgelipLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEEnrglgeranlgrqfleveldqarekyVQEL 1480
Cdd:TIGR02168 814 L----------LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED--------------------------IESL 857
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1481 AAVRADAETRLAEVQREAQStarelevmtakyegakvkVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKA 1560
Cdd:TIGR02168 858 AAEIEELEELIEELESELEA------------------LLNERASLEEALALLRSELEELSEELRELESKRSELRRELEE 919
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1561 VQAQGGESQQEAQRLQAQLNELQAQLSqkeqaaEHYKLQMEKAKTHYDAKKQqnqelqeqlrSLEQLQKENKELRAEAER 1640
Cdd:TIGR02168 920 LREKLAQLELRLEGLEVRIDNLQERLS------EEYSLTLEEAEALENKIED----------DEEEARRRLKRLENKIKE 983
|
..
gi 2217283087 1641 LG 1642
Cdd:TIGR02168 984 LG 985
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
964-1542 |
3.57e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 101.55 E-value: 3.57e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 964 QAALQAMEREAEQMGNELERLRAALmesqGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEM---RLQNALNE 1040
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAEL----AELEAELEELRLELEELELELEEAQAEEYELLAELARLEQdiaRLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1041 QRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRteptgp 1120
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEE------ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1121 KLEALRAEVSKLEQQCQKQQEQADSLERSLEAERAsRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQ 1200
Cdd:COG1196 388 LLEALRAAAELAAQLEELEEAEEALLERLERLEEE-LEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLA 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1201 DHSKAEDEWKAQVARGRQEAERKNSLISSLEEevsiLNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNS 1280
Cdd:COG1196 467 ELLEEAALLEAALAELLEELAEAAARLLLLLE----AEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEA 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1281 ARAAERSSALREEVQSLREEAE--KQRVASENLRQELTSQAERAEELGQELKAWQEKFF-------QKEQALSTLQLEHT 1351
Cdd:COG1196 543 ALAAALQNIVVEDDEVAAAAIEylKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVdlvasdlREADARYYVLGDTL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1352 STQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKA 1431
Cdd:COG1196 623 LGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1432 SYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMtak 1511
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL--- 779
|
570 580 590
....*....|....*....|....*....|..
gi 2217283087 1512 yeGA-KVKVLEERQRFQEERQKLTAQVEELSK 1542
Cdd:COG1196 780 --GPvNLLAIEEYEELEERYDFLSEQREDLEE 809
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
673-1647 |
4.55e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 101.29 E-value: 4.55e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 673 VAELELQLRSEQQKATEKERVAQEKDQLQE-QLQALKESLKvtkgSLEEEKRRAADALEEQQRCISELKAETRSLVEQHk 751
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERYKELKAELRElELALLVLRLE----ELREELEELQEELKEAEEELEELTAELQELEEKL- 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 752 rerkeleeeragrkglearlqqlgEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYgamf 831
Cdd:TIGR02168 270 ------------------------EELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEEL---- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 832 QEQLMTLKEECEKARQELQEAKEKVAGIEShselQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAA 911
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKE----ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIAS 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 912 TSKEVARLETLVRKAGEQQEtasrelvkepaRAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALmes 991
Cdd:TIGR02168 398 LNNEIERLEARLERLEDRRE-----------RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEAL--- 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 992 qgqqqeergqqerevARLTQERGRAQADLALEKAARAELEMRLqNALNEQRVEFATLQEALAHALTEKEGKDQELAKL-- 1069
Cdd:TIGR02168 464 ---------------EELREELEEAEQALDAAERELAQLQARL-DSLERLQENLEGFSEGVKALLKNQSGLSGILGVLse 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1070 -----RGLEAAQIKELEELRQTVKQLKEQLAKKEKEHAsgsgAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQAD 1144
Cdd:TIGR02168 528 lisvdEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFL----KQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGV 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1145 SLERSLEAERASRAerdsaLETLQGQLeekaqelgHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKN 1224
Cdd:TIGR02168 604 AKDLVKFDPKLRKA-----LSYLLGGV--------LVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNS 670
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1225 SlissleeevsILNRQvlekegesKELKRLvmaeSEKSQKLEERLRLLQAETAsnsaraaerssALREEVQSLREEAEKQ 1304
Cdd:TIGR02168 671 S----------ILERR--------REIEEL----EEKIEELEEKIAELEKALA-----------ELRKELEELEEELEQL 717
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1305 RVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREE 1384
Cdd:TIGR02168 718 RKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEE 797
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1385 LEQSKQAAGGLRAELLRaqrelgelipLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEEnrglgeranlgrqf 1464
Cdd:TIGR02168 798 LKALREALDELRAELTL----------LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED-------------- 853
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1465 leveldqarekyVQELAAVRADAETRLAEVQREAQStarelevmtakyegakvkVLEERQRFQEERQKLTAQVEELSKKL 1544
Cdd:TIGR02168 854 ------------IESLAAEIEELEELIEELESELEA------------------LLNERASLEEALALLRSELEELSEEL 903
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1545 ADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSqkeqaaEHYKLQMEKAKTHYDAKKQQNQELQEQLRSL 1624
Cdd:TIGR02168 904 RELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS------EEYSLTLEEAEALENKIEDDEEEARRRLKRL 977
|
970 980 990
....*....|....*....|....*....|.
gi 2217283087 1625 EQLQKE--------NKELRAEAERLGHELQQ 1647
Cdd:TIGR02168 978 ENKIKElgpvnlaaIEEYEELKERYDFLTAQ 1008
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
845-1347 |
9.16e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.01 E-value: 9.16e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 845 ARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVR 924
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 925 KAGEQQETASRELVKEPARAGDRQPEwLEEQQGRQfcstqAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQER 1004
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEE-LEELEEEL-----EEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1005 EVARLTQER----------GRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEA 1074
Cdd:COG1196 387 ELLEALRAAaelaaqleelEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLA 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1075 AQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALR------------------------AEVS 1130
Cdd:COG1196 467 ELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGlrglagavavligveaayeaaleaALAA 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1131 KLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQELGHSQSA---LASAQRELAAFRTKVQDHSKAED 1207
Cdd:COG1196 547 ALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAvdlVASDLREADARYYVLGDTLLGRT 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1208 EWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERS 1287
Cdd:COG1196 627 LVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE 706
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1288 SALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQ 1347
Cdd:COG1196 707 RELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE 766
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
595-1351 |
1.22e-20 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 100.22 E-value: 1.22e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 595 SLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQR-----EKAELSRKVEELQACVETARQEQHEA 669
Cdd:PTZ00121 1068 QDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKaeeakKKAEDARKAEEARKAEDARKAEEARK 1147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 670 QAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALkESLKVTKGSLEEEKRRAADA--LEEQQRCISELKAETRSLV 747
Cdd:PTZ00121 1148 AEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAE-EVRKAEELRKAEDARKAEAArkAEEERKAEEARKAEDAKKA 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 748 EQHKRERKELEEERAGRKGLEARLQQ---LGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEE 824
Cdd:PTZ00121 1227 EAVKKAEEAKKDAEEAKKAEEERNNEeirKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADE 1306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 825 AQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSE------------LQISRQQNELAELHANLARALQQVQEKE 892
Cdd:PTZ00121 1307 AKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEaakaeaeaaadeAEAAEEKAEAAEKKKEEAKKKADAAKKK 1386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 893 VRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETAsrelvkEPARAGDRQPEWLEEQQGRQFCSTQAAlqaMER 972
Cdd:PTZ00121 1387 AEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKA------EEKKKADEAKKKAEEAKKADEAKKKAE---EAK 1457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 973 EAEQMGNELERLRAAlmesQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEAL 1052
Cdd:PTZ00121 1458 KAEEAKKKAEEAKKA----DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEA 1533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1053 AHAltEKEGKDQELAKlrgleAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEptgpklEALRAEVSKL 1132
Cdd:PTZ00121 1534 KKA--DEAKKAEEKKK-----ADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAE------EARIEEVMKL 1600
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1133 EQQcqkqqeqadslERSLEAERASRAERdsalETLQGQLEEKAQELGHSQSALASAQRELaafRTKVQDHSKAEDEWK-- 1210
Cdd:PTZ00121 1601 YEE-----------EKKMKAEEAKKAEE----AKIKAEELKKAEEEKKKVEQLKKKEAEE---KKKAEELKKAEEENKik 1662
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1211 -AQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEErlrlLQAETASNSARAaERSSA 1289
Cdd:PTZ00121 1663 aAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEE----LKKAEEENKIKA-EEAKK 1737
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 1290 LREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHT 1351
Cdd:PTZ00121 1738 EAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKK 1799
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
525-1365 |
3.16e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 98.60 E-value: 3.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 525 KQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALK 604
Cdd:TIGR02169 172 KEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 605 QLEALEK---EKAAKLEILQQQL-QVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQL 680
Cdd:TIGR02169 252 ELEKLTEeisELEKRLEEIEQLLeELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEI 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 681 RSEQQKATEKER----VAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAA----------DALEEQQRCISELKAETRSL 746
Cdd:TIGR02169 332 DKLLAEIEELEReieeERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAetrdelkdyrEKLEKLKREINELKRELDRL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 747 VEQHKRERKELEEERAGRKGLEARLQQLgeahQAETEVLRRELAEamaaqhtAESECEQLVKEVAAWRERYEDSQQEEAQ 826
Cdd:TIGR02169 412 QEELQRLSEELADLNAAIAGIEAKINEL----EEEKEDKALEIKK-------QEWKLEQLAADLSKYEQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 827 YgamfQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELAelhanLARALQQVQEK-----EVRAQKLADD 901
Cdd:TIGR02169 481 V----EKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHG-----TVAQLGSVGERyataiEVAAGNRLNN 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 902 LSTLQEKMAATSKEVARletlVRKAGE------QQETASRELVKEPARAG---------DRQPEWleEQQGRQFCSTQAA 966
Cdd:TIGR02169 552 VVVEDDAVAKEAIELLK----RRKAGRatflplNKMRDERRDLSILSEDGvigfavdlvEFDPKY--EPAFKYVFGDTLV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 967 LQAMEREAEQMGN-ELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEmRLQNALNEQRVEF 1045
Cdd:TIGR02169 626 VEDIEAARRLMGKyRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELS-SLQSELRRIENRL 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1046 ATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEhasgsgaQSEAAGRTEPTGPKLEAL 1125
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSE-------LKELEARIEELEEDLHKL 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1126 RAEVSKLEQQCQKQQEqaDSLERSLEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKA 1205
Cdd:TIGR02169 778 EEALNDLEARLSHSRI--PEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1206 EDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAE 1285
Cdd:TIGR02169 856 IENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSE 935
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1286 RSSALREEVQSLREEAEKQRVASEnlRQELTSQAERAEELG----QELKAWQEKFFQKEQALSTLQLEHTSTQALVSELL 1361
Cdd:TIGR02169 936 IEDPKGEDEEIPEEELSLEDVQAE--LQRVEEEIRALEPVNmlaiQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYE 1013
|
....
gi 2217283087 1362 PAKH 1365
Cdd:TIGR02169 1014 KKKR 1017
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
517-1250 |
6.97e-20 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 97.90 E-value: 6.97e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 517 QDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASL 596
Cdd:PTZ00121 1077 KDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 597 -RERDAALKQLEALEKEKAAKLEILQQQLQV--ANEARDSAQTSVTQAQReKAELSRKVEElqacVETARQEQHEAQAQV 673
Cdd:PTZ00121 1157 aRKAEDARKAEEARKAEDAKKAEAARKAEEVrkAEELRKAEDARKAEAAR-KAEEERKAEE----ARKAEDAKKAEAVKK 1231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 674 AElELQLRSEQQKATEKERVAQEKDQLQEQLQAlkeslkvtkgslEEEKRRAADALEEQQRCISELKAETRSLVEQHKRE 753
Cdd:PTZ00121 1232 AE-EAKKDAEEAKKAEEERNNEEIRKFEEARMA------------HFARRQAAIKAEEARKADELKKAEEKKKADEAKKA 1298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 754 RKELEEERAGRKGLEAR----LQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYE--DSQQEEAQY 827
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKkadeAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEaaEKKKEEAKK 1378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 828 GAmfqEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKladdlstlQE 907
Cdd:PTZ00121 1379 KA---DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK--------AD 1447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 908 KMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQPEWLEEQQGRQFCSTQAALQAME----REAEQMGNELER 983
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKadeaKKAEEAKKADEA 1527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 984 LRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELE--MRLQNALNEQRVEFATLQEALAHALTEKEG 1061
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDknMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1062 KDQELAKLR--GLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQ 1139
Cdd:PTZ00121 1608 KAEEAKKAEeaKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1140 QEQADSLERslEAERASRAERdsaLETLQGQLEEKAQELghsqsalasaQRELAAFRTKVQDHSKAEDEWKAQVARGRQE 1219
Cdd:PTZ00121 1688 KKAAEALKK--EAEEAKKAEE---LKKKEAEEKKKAEEL----------KKAEEENKIKAEEAKKEAEEDKKKAEEAKKD 1752
|
730 740 750
....*....|....*....|....*....|.
gi 2217283087 1220 AERKNSLISSLEEEVSILNRQVLEKEGESKE 1250
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE 1783
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1144-1685 |
3.83e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 95.00 E-value: 3.83e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1144 DSLERslEAERASRAErdsaleTLQGQLEEKAQELghSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERK 1223
Cdd:COG1196 203 EPLER--QAEKAERYR------ELKEELKELEAEL--LLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1224 NSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEK 1303
Cdd:COG1196 273 RLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1304 QRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHRE 1383
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1384 ELEQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRG---------- 1453
Cdd:COG1196 433 LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADyegflegvka 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1454 ---------------------------LGERANLGRQFLEVELDQAREKYVQELAAVRADAETRL---AEVQREAQSTAR 1503
Cdd:COG1196 513 alllaglrglagavavligveaayeaaLEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLpldKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1504 ELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQ 1583
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1584 AQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLT 1663
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
570 580
....*....|....*....|..
gi 2217283087 1664 AQVRSLEAQVAHADQQLRDLGK 1685
Cdd:COG1196 753 LEELPEPPDLEELERELERLER 774
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
277-860 |
3.01e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 91.92 E-value: 3.01e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 277 ELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKAT---Q 353
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEerrR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 354 EWLEKQAQLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQdnppqekgevlgdvlqlETLKQEAATLAANNTQLQ 433
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAE-----------------AELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 434 ARVEMLETERgQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNAT 513
Cdd:COG1196 376 EAEEELEELA-EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 514 IQQQDQELAGLKQQAKEKQaqlaqtlqqqeqasqglrhQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEERE 593
Cdd:COG1196 455 EEEEEALLELLAELLEEAA-------------------LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 594 ASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQV 673
Cdd:COG1196 516 LAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARG 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 674 AELE--LQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEqqrcISELKAETRSLVEQHK 751
Cdd:COG1196 596 AIGAavDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEG----GSAGGSLTGGSRRELL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 752 RERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMF 831
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
570 580
....*....|....*....|....*....
gi 2217283087 832 QEQLMTLKEECEKARQELQEAKEKVAGIE 860
Cdd:COG1196 752 ALEELPEPPDLEELERELERLEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1015-1717 |
5.82e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 91.27 E-value: 5.82e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1015 RAQADLALEKAARAELEMRLQN--ALNEQRVEFATLQEALAHA-----LTEKEGKDQELAKLRGLEAAQIKELEELRQTV 1087
Cdd:TIGR02168 183 RTRENLDRLEDILNELERQLKSleRQAEKAERYKELKAELRELelallVLRLEELREELEELQEELKEAEEELEELTAEL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1088 KQLKEQLAKKEKEHASGSGAQSEAAGRteptgpkLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETL 1167
Cdd:TIGR02168 263 QELEEKLEELRLEVSELEEEIEELQKE-------LYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1168 QGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWkaqvargRQEAERKNSLISSLEEEVSILNRQVLEKEGE 1247
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEELEAELEELESRLEEL-------EEQLETLRSKVAQLELQIASLNNEIERLEAR 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1248 SKELK-RLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELG 1326
Cdd:TIGR02168 409 LERLEdRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQ 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1327 QELKAWQ------EKFFQKEQALSTLQLEHTSTQALVSELLPAKH---------LCQQLQAEQAAAEKRHREELEQSKQA 1391
Cdd:TIGR02168 489 ARLDSLErlqenlEGFSEGVKALLKNQSGLSGILGVLSELISVDEgyeaaieaaLGGRLQAVVVENLNAAKKAIAFLKQN 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1392 AGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSM--------------LKKAHGLLAEENRGL--- 1454
Cdd:TIGR02168 569 ELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvddLDNALELAKKLRPGYriv 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1455 ----------------GERANLGRQFLEVELDQAREKY-------------VQELAAVRADAETRLAEVQREAQSTAREL 1505
Cdd:TIGR02168 649 tldgdlvrpggvitggSAKTNSSILERRREIEELEEKIeeleekiaelekaLAELRKELEELEEELEQLRKELEELSRQI 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1506 EVMTAKYEGAKVKV---LEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNEL 1582
Cdd:TIGR02168 729 SALRKDLARLEAEVeqlEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDEL 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1583 QAQLSQKEQAAEHYKLQMEKAKTHYDAKKqqnqelqeqlRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHL 1662
Cdd:TIGR02168 809 RAELTLLNEEAANLRERLESLERRIAATE----------RRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 1663 TAQVRSLEAQVAHADQQLRDLGKFQVATDALKSREPQAKPQLDLSIDSLDLSCEE 1717
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG 933
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
972-1681 |
9.10e-18 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 90.97 E-value: 9.10e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 972 REAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNAlneQRVEFATLQEA 1051
Cdd:PTZ00121 1104 KKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEA---RKAEDAKKAEA 1180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1052 LAHALTEKEGKDQELAK-LRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVS 1130
Cdd:PTZ00121 1181 ARKAEEVRKAEELRKAEdARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEA 1260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1131 KLEQQCQKQQE-------QADSLERSLEAERASRAERDSALETLQgQLEEKAQELGHSQSALASAQRElaafRTKVQDHS 1203
Cdd:PTZ00121 1261 RMAHFARRQAAikaeearKADELKKAEEKKKADEAKKAEEKKKAD-EAKKKAEEAKKADEAKKKAEEA----KKKADAAK 1335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1204 KAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRlvmaESEKSQKLEERLRllQAETASNSARA 1283
Cdd:PTZ00121 1336 KKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKK----KAEEKKKADEAKK--KAEEDKKKADE 1409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1284 AERSSALREEVQSLREEAEKQRVASE-NLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLP 1362
Cdd:PTZ00121 1410 LKKAAAAKKKADEAKKKAEEKKKADEaKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK 1489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1363 AKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGELIPLRQkvAEQERTAQQLR-AEKASYAEQLSMlk 1441
Cdd:PTZ00121 1490 KKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK--AEEKKKADELKkAEELKKAEEKKK-- 1565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1442 kahgllAEENRGLGERANLGRQFLEvELDQAREKYVQELAAVRADAETRLAEVQREAQStarelevmtAKYEGAKVKVLE 1521
Cdd:PTZ00121 1566 ------AEEAKKAEEDKNMALRKAE-EAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE---------AKIKAEELKKAE 1629
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1522 ERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRlqAQLNELQAQLSQKEQAAEHYKLQME 1601
Cdd:PTZ00121 1630 EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK--AEEDEKKAAEALKKEAEEAKKAEEL 1707
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1602 KAKTHYDAKKQQNQELQEQLRSL--EQLQKENKELRAEAERL----GHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAH 1675
Cdd:PTZ00121 1708 KKKEAEEKKKAEELKKAEEENKIkaEEAKKEAEEDKKKAEEAkkdeEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE 1787
|
....*.
gi 2217283087 1676 ADQQLR 1681
Cdd:PTZ00121 1788 EDEKRR 1793
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
434-1302 |
1.66e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 86.28 E-value: 1.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 434 ARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNAT 513
Cdd:TIGR02169 187 ERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 514 IQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGlrhQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAaEERE 593
Cdd:TIGR02169 267 LEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEA---EIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEI-EELE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 594 ASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQV 673
Cdd:TIGR02169 343 REIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEEL 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 674 AELELQLRSEQQKATEKERVAQEKD-------QLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSL 746
Cdd:TIGR02169 423 ADLNAAIAGIEAKINELEEEKEDKAleikkqeWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARAS 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 747 VEQHKRERKELEEERAGRKGLEARLQQLG---EAHQAETEV-LRRELAEAMAAQHTAESECEQLVKEVAAWR-------- 814
Cdd:TIGR02169 503 EERVRGGRAVEEVLKASIQGVHGTVAQLGsvgERYATAIEVaAGNRLNNVVVEDDAVAKEAIELLKRRKAGRatflplnk 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 815 ----ERYEDSQQEEAQYGamFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQIsrqqnelaelhanlaralqqvqe 890
Cdd:TIGR02169 583 mrdeRRDLSILSEDGVIG--FAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAARRLMG----------------------- 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 891 kEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELvkepaRAGDRQPEWLEEQQGRQFCSTQAALQAM 970
Cdd:TIGR02169 638 -KYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERL-----EGLKRELSSLQSELRRIENRLDELSQEL 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 971 eREAEQMGNELERlraalmesqgqqqeergqqerevarltqERGRAQADLALEKAARAELEMRLQnalnEQRVEFATLQE 1050
Cdd:TIGR02169 712 -SDASRKIGEIEK----------------------------EIEQLEQEEEKLKERLEELEEDLS----SLEQEIENVKS 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1051 ALAHALTEKEGKDQELAKLRgleaAQIKELE--ELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAE 1128
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLE----EALNDLEarLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE 834
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1129 VSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQdhskaedE 1208
Cdd:TIGR02169 835 IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIE-------E 907
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1209 WKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKsQKLEERLRLLqaETASNSA-----RA 1283
Cdd:TIGR02169 908 LEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAEL-QRVEEEIRAL--EPVNMLAiqeyeEV 984
|
890
....*....|....*....
gi 2217283087 1284 AERSSALREEVQSLREEAE 1302
Cdd:TIGR02169 985 LKRLDELKEKRAKLEEERK 1003
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
553-1331 |
3.32e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 85.50 E-value: 3.32e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 553 VEQLSSSLKQKEQQLKEVAEKQEATR---QDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQvane 629
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDliiDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKE---- 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 630 ardsaqtsvtQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRseqqKATEKERVaqekdQLQEQLQALKE 709
Cdd:TIGR02169 241 ----------AIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK----DLGEEEQL-----RVKEKIGELEA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 710 SLKVTKGSLEEEKRRAADALEEQQrcisELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLgeahQAETEVLRREL 789
Cdd:TIGR02169 302 EIASLERSIAEKERELEDAEERLA----KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAEL----KEELEDLRAEL 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 790 AEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQygamFQEQLMTLKEECEKARQELQEAKEKVAGIESHSE---LQ 866
Cdd:TIGR02169 374 EEVDKEFAETRDELKDYREKLEKLKREINELKRELDR----LQEELQRLSEELADLNAAIAGIEAKINELEEEKEdkaLE 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 867 ISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAA--TSKEVARLETLVRKAGEQQETASRE----LVKE 940
Cdd:TIGR02169 450 IKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEaeAQARASEERVRGGRAVEEVLKASIQgvhgTVAQ 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 941 PARAGDRQPEWLEEQQGRQFcstQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADL 1020
Cdd:TIGR02169 530 LGSVGERYATAIEVAAGNRL---NNVVVEDDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLV 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1021 ALEKAARAELEMRLQNALNEQRVEFATLQE------ALAHALTEKEG---------------KDQELAKLRGLeAAQIKE 1079
Cdd:TIGR02169 607 EFDPKYEPAFKYVFGDTLVVEDIEAARRLMgkyrmvTLEGELFEKSGamtggsraprggilfSRSEPAELQRL-RERLEG 685
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1080 LEELRQTvkqLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASrae 1159
Cdd:TIGR02169 686 LKRELSS---LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSE--- 759
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1160 rdsaLETLQGQLEEKAQELGHSQSALASAQRELA--AFRTKVQDHSKAEDEWKAQVARGR---QEAERKNSLISSLEEEV 1234
Cdd:TIGR02169 760 ----LKELEARIEELEEDLHKLEEALNDLEARLShsRIPEIQAELSKLEEEVSRIEARLReieQKLNRLTLEKEYLEKEI 835
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1235 SILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARaaerssalREEVQSLREEAEKQRVASENLRQE 1314
Cdd:TIGR02169 836 QELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR--------LGDLKKERDELEAQLRELERKIEE 907
|
810
....*....|....*..
gi 2217283087 1315 LTSQAERAEELGQELKA 1331
Cdd:TIGR02169 908 LEAQIEKKRKRLSELKA 924
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
217-856 |
5.47e-16 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 84.81 E-value: 5.47e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 217 RRLKKQLADERSNRDELELELAEN-RKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEELRDKNEsltMRLHET 295
Cdd:PTZ00121 1224 KKAEAVKKAEEAKKDAEEAKKAEEeRNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE---AKKAEE 1300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 296 LKQCQDLKtEKSQMDRKINQLSEEngdlsfklrefASHLQQLQDALNELTEEHSKATQEWLEKQAQLEKELSAALQDKKC 375
Cdd:PTZ00121 1301 KKKADEAK-KKAEEAKKADEAKKK-----------AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA 1368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 376 LEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQArvemlETERGQQEAKLLAERG 455
Cdd:PTZ00121 1369 AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKA-----EEKKKADEAKKKAEEA 1443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 456 HFEEEkqqlsslitdlqssisnlsqAKEELEQASQAHGARLTAQVASLTSELTTlnatiqqqdqelaglKQQAKEKQAQL 535
Cdd:PTZ00121 1444 KKADE--------------------AKKKAEEAKKAEEAKKKAEEAKKADEAKK---------------KAEEAKKADEA 1488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 536 AQTLQQQEQASQGLRHQVEQlssslKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKekaa 615
Cdd:PTZ00121 1489 KKKAEEAKKKADEAKKAAEA-----KKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKK---- 1559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 616 kleilqqqlqvANEARDSAQTSvtQAQREKAELSRKVEELQAcVETARQEQheaQAQVAELELQLRSEQQKATEKERVAQ 695
Cdd:PTZ00121 1560 -----------AEEKKKAEEAK--KAEEDKNMALRKAEEAKK-AEEARIEE---VMKLYEEEKKMKAEEAKKAEEAKIKA 1622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 696 EKDQLQEQLQALKESLKVTKgslEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLG 775
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKE---AEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 776 EAHQAEtEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQ-EEAQYGAMFQEQLMTLKEECEKARQELQEAKE 854
Cdd:PTZ00121 1700 EAKKAE-ELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKaEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKE 1778
|
..
gi 2217283087 855 KV 856
Cdd:PTZ00121 1779 AV 1780
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1078-1701 |
1.07e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 84.04 E-value: 1.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1078 KELEELRQTVKQLKEQLAKKEKEHASGSGA-QSEAAGRTEPTGPKLEALRAEVSKlEQQCQKQQEQADSLERSLEAERAS 1156
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKKAEDArKAEEARKAEDARKAEEARKAEDAK-RVEIARKAEDARKAEEARKAEDAK 1176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1157 RAERDSALETLQgqleeKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSI 1236
Cdd:PTZ00121 1177 KAEAARKAEEVR-----KAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNN 1251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1237 LNRQVLEKEGESKELKRLVMAESEKSQKLEErLRLLQAETASNSARAAERssalREEVQSLREEAEKQRVASENLR--QE 1314
Cdd:PTZ00121 1252 EEIRKFEEARMAHFARRQAAIKAEEARKADE-LKKAEEKKKADEAKKAEE----KKKADEAKKKAEEAKKADEAKKkaEE 1326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1315 LTSQAERAEELGQELKAWQEKFFQKEQALSTlQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGG 1394
Cdd:PTZ00121 1327 AKKKADAAKKKAEEAKKAAEAAKAEAEAAAD-EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKK 1405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1395 LRAELLRAQRELGELIPLRQKvAEQERTAQQLRaEKASYAEQLSMLKKahgllaeenrglgeranlgrqfleveldQARE 1474
Cdd:PTZ00121 1406 KADELKKAAAAKKKADEAKKK-AEEKKKADEAK-KKAEEAKKADEAKK----------------------------KAEE 1455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1475 KYVQELAAVRADAETRLAEVQREAQStARELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVEELSKKladSDQASKVQ 1554
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEE-AKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKK---ADEAKKAE 1531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1555 QQKlKAVQAQGGESQQEAQRLQAQLNELQAQLSQKeqaAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLEQLQKENKEL 1634
Cdd:PTZ00121 1532 EAK-KADEAKKAEEKKKADELKKAEELKKAEEKKK---AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 1635 RAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDALKSREPQAK 1701
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDK 1674
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
782-1642 |
4.12e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 81.65 E-value: 4.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 782 TEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGamfqEQLMTLKEECEKAR--QELQEAKEKVAGI 859
Cdd:TIGR02169 151 SPVERRKIIDEIAGVAEFDRKKEKALEELEEVEENIERLDLIIDEKR----QQLERLRREREKAEryQALLKEKREYEGY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 860 ESHSEL-----QISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEK-MAATSKEVARLETLVRKAGEQQETA 933
Cdd:TIGR02169 227 ELLKEKealerQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 934 SRELvkepaRAGDRQPEWLEEQQGRqfcsTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQER 1013
Cdd:TIGR02169 307 ERSI-----AEKERELEDAEERLAK----LEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVD 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1014 GRAQADLALEKAARAELEMrLQNALNEQRVEFATLQEalahaltEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQ 1093
Cdd:TIGR02169 378 KEFAETRDELKDYREKLEK-LKREINELKRELDRLQE-------ELQRLSEELADLNAAIAGIEAKINELEEEKEDKALE 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1094 LAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEE 1173
Cdd:TIGR02169 450 IKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQ 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1174 KAQELGHSQSALASAQ-RELAAFRTKVQDHSKAEDEWKAQVARGR------QEAERKNSLISSLEEEVSI---LNRQVLE 1243
Cdd:TIGR02169 530 LGSVGERYATAIEVAAgNRLNNVVVEDDAVAKEAIELLKRRKAGRatflplNKMRDERRDLSILSEDGVIgfaVDLVEFD 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1244 KEGESKEL----KRLVMAESEKSQKLEERLRLLQAET-----------ASNSARAAE-RSSALREEVQSLREEAEKQRVA 1307
Cdd:TIGR02169 610 PKYEPAFKyvfgDTLVVEDIEAARRLMGKYRMVTLEGelfeksgamtgGSRAPRGGIlFSRSEPAELQRLRERLEGLKRE 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1308 SENLRQELTSQAERAEELGQELKAWQEKffqkeqaLSTLQLEhtstqalvsellpakhlcqqlqaeqaaaekrhREELEQ 1387
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDASRK-------IGEIEKE--------------------------------IEQLEQ 730
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1388 SKQAAGGLRAELLRAQRElgelipLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLaeenrglgeRANLGRQFLEV 1467
Cdd:TIGR02169 731 EEEKLKERLEELEEDLSS------LEQEIENVKSELKELEARIEELEEDLHKLEEALNDL---------EARLSHSRIPE 795
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1468 ELDQAR--EKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQE---ERQKLTAQVEELSK 1542
Cdd:TIGR02169 796 IQAELSklEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENlngKKEELEEELEELEA 875
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1543 KLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMekakTHYDAKKQQNQELQEQLR 1622
Cdd:TIGR02169 876 ALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEEL----SEIEDPKGEDEEIPEEEL 951
|
890 900
....*....|....*....|
gi 2217283087 1623 SLEQLQKENKELRAEAERLG 1642
Cdd:TIGR02169 952 SLEDVQAELQRVEEEIRALE 971
|
|
| HkD_SF |
cd22211 |
Hook domain-containing proteins superfamily; The Hook domain superfamily includes Hook adaptor ... |
8-136 |
1.40e-14 |
|
Hook domain-containing proteins superfamily; The Hook domain superfamily includes Hook adaptor proteins, Hook-related proteins and nuclear mitotic apparatus protein (NuMA). They share an N-terminal conserved globular Hook domain, which folds as a variant of the helical calponin homology (CH) domain with an extended alpha-helix. The Hook domain is responsible for the binding of microtubule. The Hook family includes microtubule-binding proteins, Hook1-3. Hook1 is required for spermatid differentiation. Hook2 contributes to the establishment and maintenance of centrosome function. Hook3 is an adaptor protein for microtubule-dependent intracellular vesicle and protein trafficking, and is involved in Golgi and endosome transport. Hook proteins are components of the FTS/Hook/FHIP complex (FHF complex), which may function to promote vesicle trafficking and/or fusion via the homotypic vesicular protein sorting (HOPS) complex. The Hook-related protein (HkRP) family includes Daple, Girdin and Gipie. Daple, also called Dvl-associating protein with a high frequency of leucine residues, or coiled-coil domain-containing protein 88C(CCDC88C), or Hook-related protein 2 (HkRP2), is a novel non-receptor nucleotide exchange factor (GEF) required for activation of guanine nucleotide-binding proteins (G-proteins) during non-canonical Wnt signaling. Girdin, also called Akt phosphorylation enhancer (APE), or coiled-coil domain-containing protein 88A (CCDC88A), or G alpha-interacting vesicle-associated protein (GIV), or Girders of actin filament, or Hook-related protein 1 (HkRP1), is a bifunctional modulator of guanine nucleotide-binding proteins (G proteins). Gipie, also called GRP78-interacting protein induced by ER stress, or coiled-coil domain-containing protein 88B(CCDC88B), or brain leucine zipper domain-containing protein, or Hook-related protein 3 (HkRP3), is a novel actin cytoskeleton-binding protein and Akt substrate that regulates cell migratory responses in various biological contexts. NuMA, also called nuclear mitotic apparatus protein 1, or nuclear matrix protein-22 (NMP-22), or SP-H antigen, is a microtubule (MT)-binding protein that plays a role in the formation and maintenance of the spindle poles and the alignment and the segregation of chromosomes during mitotic cell division.
Pssm-ID: 411792 Cd Length: 145 Bit Score: 72.69 E-value: 1.40e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 8 GAALLSWVNSLHVADPVEAVLQLQDCSIFIKIIDRIHGTEEGQQILKQPVS--------ERLDFVCSFLQKNRKH----P 75
Cdd:cd22211 1 EAALLAWINTFPLSSPVESLDDLSDGVVLAEILSQIDPSYFDSEWLESRDSsdnwvlklNNLKKLYRSLSKYYREvlgqQ 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 76 SSPECLVSAQKVLE-GSELELAKMTMLLLYHSTMSSKSPRD---WEQFEYKIQAELAVILKFVLD 136
Cdd:cd22211 81 LSDLPLPDLSAIARdGDEEEIVKLLELVLGAAVQCENKEEYiarIQQLDESTQAELMLIIQEVLE 145
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
906-1683 |
1.67e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 79.72 E-value: 1.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 906 QEKMAATSKEVARLETLVRKAGEQQETASR--ELVKEPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELER 983
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLERqaEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 984 LRAALMESQGQQQEERGQqereVARLTQERGRAQADLALEKAARAELEMRLQnalnEQRVEFATLQEALAHALTEKEGKD 1063
Cdd:TIGR02168 258 LTAELQELEEKLEELRLE----VSELEEEIEELQKELYALANEISRLEQQKQ----ILRERLANLERQLEELEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1064 QELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEhasgsgaQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQA 1143
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELESLEAELEELEAE-------LEELESRLEELEEQLETLRSKVAQLELQIASLNNEI 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1144 DSLERSLEAERASRAERDSALETLQGQLEEkaQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERK 1223
Cdd:TIGR02168 403 ERLEARLERLEDRRERLQQEIEELLKKLEE--AELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1224 NSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAerssALREEVQSL-REEAE 1302
Cdd:TIGR02168 481 ERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEA----ALGGRLQAVvVENLN 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1303 KQRVASENLRQ---------ELTSQAERA-EELGQELKAWQEKFFQkeqALSTLQLEHTSTQALVSELLPAKHLCQQLQA 1372
Cdd:TIGR02168 557 AAKKAIAFLKQnelgrvtflPLDSIKGTEiQGNDREILKNIEGFLG---VAKDLVKFDPKLRKALSYLLGGVLVVDDLDN 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1373 EQAAAEKRHREELEQSKQ----------AAGGLRAELLRAQRElGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKK 1442
Cdd:TIGR02168 634 ALELAKKLRPGYRIVTLDgdlvrpggviTGGSAKTNSSILERR-REIEELEEKIEELEEKIAELEKALAELRKELEELEE 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1443 AHGLLAEENRGLGERANLGRQFLEVEldqarEKYVQELAAVRADAETRLAEVQREAQSTARELEvmtakyegakvKVLEE 1522
Cdd:TIGR02168 713 ELEQLRKELEELSRQISALRKDLARL-----EAEVEQLEERIAQLSKELTELEAEIEELEERLE-----------EAEEE 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1523 RQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQ-------LNELQAQLSQKEQAAEH 1595
Cdd:TIGR02168 777 LAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRiaaterrLEDLEEQIEELSEDIES 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1596 YKLQMEKAKTHYDAKKQQNQELQEQLRSLEQlqkENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAH 1675
Cdd:TIGR02168 857 LAAEIEELEELIEELESELEALLNERASLEE---ALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG 933
|
....*...
gi 2217283087 1676 ADQQLRDL 1683
Cdd:TIGR02168 934 LEVRIDNL 941
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
415-746 |
3.48e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.95 E-value: 3.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 415 LETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHgA 494
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL-T 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 495 RLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEkqaqLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQ 574
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ----LKEELKALREALDELRAELTLLNEEAANLRERLESLERRI 833
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 575 EATRQdHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEE 654
Cdd:TIGR02168 834 AATER-RLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 655 LQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQE------------KDQLQEQLQALK-------------- 708
Cdd:TIGR02168 913 LRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEeaealenkieddEEEARRRLKRLEnkikelgpvnlaai 992
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2217283087 709 ---ESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSL 746
Cdd:TIGR02168 993 eeyEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARER 1033
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
223-900 |
5.43e-14 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 77.96 E-value: 5.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 223 LADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDrlALLNEKQAASPLEPKELEELRDKNESLTMRLHETLKQCQdl 302
Cdd:pfam12128 246 LQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQ--ETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDR-- 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 303 ktekSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQLEKELSAALQDkkcleeknei 382
Cdd:pfam12128 322 ----SELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQ---------- 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 383 LQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNtqlqARVEMLETERGQQEAKLLAERGHFEEEkq 462
Cdd:pfam12128 388 NNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLE----FNEEEYRLKSRLGELKLRLNQATATPE-- 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 463 qlssLITDLQSSISNLSQAKEELEQAsqahgarlTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQ 542
Cdd:pfam12128 462 ----LLLQLENFDERIERAREEQEAA--------NAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 543 EQASQGLRHqveQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEAleKEKAAKLEILQQ 622
Cdd:pfam12128 530 FPQAGTLLH---FLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDV--PEWAASEEELRE 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 623 QLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKerVAQEKDQLQE 702
Cdd:pfam12128 605 RLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKA--LAERKDSANE 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 703 QLQALKESLKVTKGSLEeekrraaDALEEQQRCISELKaetrslVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAET 782
Cdd:pfam12128 683 RLNSLEAQLKQLDKKHQ-------AWLEEQKEQKREAR------TEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAEL 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 783 EVLRRELAEAMAAQHTAE---SECEQLVKEVAAWRERYEDSQQEEAQYGAMFQEQLMT----LKEECEKARQELQEAKEK 855
Cdd:pfam12128 750 KALETWYKRDLASLGVDPdviAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQrrprLATQLSNIERAISELQQQ 829
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 2217283087 856 VAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLAD 900
Cdd:pfam12128 830 LARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLAT 874
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
215-926 |
6.52e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 77.80 E-value: 6.52e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 215 QMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAmmqQRIDRLALLNEKqaASPLEPKELEELRDKNESLTMRLHE 294
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKLTEEISELEKRLE---EIEQLLEELNKK--IKDLGEEEQLRVKEKIGELEAEIAS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 295 TLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQLE---KELSAALQ 371
Cdd:TIGR02169 306 LERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEevdKEFAETRD 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 372 DKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEvlgdvlqLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLL 451
Cdd:TIGR02169 386 ELKDYREKLEKLKREINELKRELDRLQEELQRLSEE-------LADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 452 AERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQ----------------VASLTSELTT------ 509
Cdd:TIGR02169 459 QLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVrggraveevlkasiqgVHGTVAQLGSvgerya 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 510 ----------LNATIQQQDQELAGLKQQAKEKQAQLA------QTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKE---- 569
Cdd:TIGR02169 539 taievaagnrLNNVVVEDDAVAKEAIELLKRRKAGRAtflplnKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPafky 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 570 -------VAEKQEATRQDHAQQLATAAEE--------REASLRERDAALKQLEALEK--EKAAKLEILQQQLQVANEARD 632
Cdd:TIGR02169 619 vfgdtlvVEDIEAARRLMGKYRMVTLEGElfeksgamTGGSRAPRGGILFSRSEPAElqRLRERLEGLKRELSSLQSELR 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 633 SAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKAT----EKERVAQEKDQLQEQLQALK 708
Cdd:TIGR02169 699 RIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIEnvksELKELEARIEELEEDLHKLE 778
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 709 ESLKVTKGSLEEEK----RRAADALEEQQRCI----SELKAETRSLVEQHKRERKELEEERAGRKGLEAR---LQQLGEA 777
Cdd:TIGR02169 779 EALNDLEARLSHSRipeiQAELSKLEEEVSRIearlREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQiksIEKEIEN 858
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 778 HQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQE---QLMTLKEECEKARQELQEAKE 854
Cdd:TIGR02169 859 LNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKkrkRLSELKAKLEALEEELSEIED 938
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 855 KVAGIESHSE---------LQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRK 925
Cdd:TIGR02169 939 PKGEDEEIPEeelsledvqAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
.
gi 2217283087 926 A 926
Cdd:TIGR02169 1019 V 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
236-920 |
1.08e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 77.03 E-value: 1.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 236 ELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQaasplepKELEELRDKNESLtmRLHETLKQCQDLKTEKSQMDRKINQ 315
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKA-------ERYQALLKEKREY--EGYELLKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 316 LSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWL----EKQAQLEKELSAALQDKKCLEEKNEILQGKLSQLE 391
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlrvkEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 392 EHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDL 471
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 472 QSSISNLSQAKEELEQASQAHgARLTAQVASLTSELTTLNATIQQQDQELaglkQQAKEKQAQLAQTLQQQEQASQGLRH 551
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAI-AGIEAKINELEEEKEDKALEIKKQEWKL----EQLAADLSKYEQELYDLKEEYDRVEK 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 552 QVEQLSSSLKQKEQQLKEVAEKQEATR------------------------QDHAQQLATAAEEREAS------------ 595
Cdd:TIGR02169 484 ELSKLQRELAEAEAQARASEERVRGGRaveevlkasiqgvhgtvaqlgsvgERYATAIEVAAGNRLNNvvveddavakea 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 596 ---LRER-----------------------------DAALKQLEALEKEKAAKLEILQQQLQVAN--EARD--------- 632
Cdd:TIGR02169 564 ielLKRRkagratflplnkmrderrdlsilsedgviGFAVDLVEFDPKYEPAFKYVFGDTLVVEDieAARRlmgkyrmvt 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 633 -------------------SAQTSVTQAQREKA-ELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEK-- 690
Cdd:TIGR02169 644 legelfeksgamtggsrapRGGILFSRSEPAELqRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIek 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 691 --ERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAAD---ALEEQQRCISELKAETRSLvEQHKRERKELEEERAGRK 765
Cdd:TIGR02169 724 eiEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKEleaRIEELEEDLHKLEEALNDL-EARLSHSRIPEIQAELSK 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 766 GLEARLQQLGEAHQAETEVLRRELAEAMaaqhtAESECEQLVKEVAAWRERYEDSQQEEAQygamFQEQLMTLKEECEKA 845
Cdd:TIGR02169 803 LEEEVSRIEARLREIEQKLNRLTLEKEY-----LEKEIQELQEQRIDLKEQIKSIEKEIEN----LNGKKEELEEELEEL 873
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 846 RQELQEAKEKVAGIEShselQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLE 920
Cdd:TIGR02169 874 EAALRDLESRLGDLKK----ERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
645-1173 |
1.88e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 76.23 E-value: 1.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 645 KAELSRKVE-ELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKES---LKVTKGSLEE 720
Cdd:PRK02224 193 KAQIEEKEEkDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEiedLRETIAETER 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 721 EKRRAADALEEQQRCISELKAETRSLVEQhkrerkeLEEERAGRKGLEARLQQLgeahQAETEVLRRELAEAMAAQHTAE 800
Cdd:PRK02224 273 EREELAEEVRDLRERLEELEEERDDLLAE-------AGLDDADAEAVEARREEL----EDRDEELRDRLEECRVAAQAHN 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 801 SECEQLVKEVAAWRERYEDSQQEEAQYGA----------MFQEQLMTLKEECEKARQELQEAKEKVAGIESHSEL---QI 867
Cdd:PRK02224 342 EEAESLREDADDLEERAEELREEAAELESeleeareaveDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEElreER 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 868 SRQQNELAELHANL---------ARALQQ-------------------VQEKEVRAQKLADDLSTLQEKMAATSKEVARL 919
Cdd:PRK02224 422 DELREREAELEATLrtarerveeAEALLEagkcpecgqpvegsphvetIEEDRERVEELEAELEDLEEEVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 920 ETLVRKAGEQQEtaSRELVKEPARAGDRQPEWLEEQQGRqfcstqaaLQAMEREAEQMGNELERLRAALMESQGQQQEER 999
Cdd:PRK02224 502 EDLVEAEDRIER--LEERREDLEELIAERRETIEEKRER--------AEELRERAAELEAEAEEKREAAAEAEEEAEEAR 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1000 GQQEREVARLTQ--ERGRAQADLALEKAARAELEMRLQNaLNEQRVEFATLQEALAHALTEKEGKDQELAKlrGLEAAQI 1077
Cdd:PRK02224 572 EEVAELNSKLAElkERIESLERIRTLLAAIADAEDEIER-LREKREALAELNDERRERLAEKRERKRELEA--EFDEARI 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1078 KELEELRQTVKQLKEQLAkkekehasgsgaqseaagrteptgPKLEALRAEVSKLEQQCQKQQEQADSLErSLEAERASR 1157
Cdd:PRK02224 649 EEAREDKERAEEYLEQVE------------------------EKLDELREERDDLQAEIGAVENELEELE-ELRERREAL 703
|
570
....*....|....*.
gi 2217283087 1158 AERDSALETLQGQLEE 1173
Cdd:PRK02224 704 ENRVEALEALYDEAEE 719
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
430-922 |
4.47e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 75.08 E-value: 4.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 430 TQLQARVEMLETERgqqeAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEqasqahgarltaqvaSLTSELTT 509
Cdd:PRK02224 202 KDLHERLNGLESEL----AELDEEIERYEEQREQARETRDEADEVLEEHEERREELE---------------TLEAEIED 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 510 LNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEqasqGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAA 589
Cdd:PRK02224 263 LRETIAETEREREELAEEVRDLRERLEELEEERD----DLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQ 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 590 EEREASLRERDAAlKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKV-------EELQACVETA 662
Cdd:PRK02224 339 AHNEEAESLREDA-DDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFgdapvdlGNAEDFLEEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 663 RQEQHEAQAQVAELELQLRSEQQKATEKER---------------------VAQEKDQLQEQLQALKESLKVTKGSLEEE 721
Cdd:PRK02224 418 REERDELREREAELEATLRTARERVEEAEAlleagkcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEER 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 722 KRRAADALEEQQRCisELKAETRSLVEQHKRERkeleeeragRKGLEARLQQLGEAHQAETEvLRRELAEAMAAQHTAES 801
Cdd:PRK02224 498 LERAEDLVEAEDRI--ERLEERREDLEELIAER---------RETIEEKRERAEELRERAAE-LEAEAEEKREAAAEAEE 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 802 ECEQLVKEVAAWRERYEDSQQEEAQYGAMfqEQLMTLKEECEKARQELQEAKEKVAGI------------ESHSELQISR 869
Cdd:PRK02224 566 EAEEAREEVAELNSKLAELKERIESLERI--RTLLAAIADAEDEIERLREKREALAELnderrerlaekrERKRELEAEF 643
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 2217283087 870 QQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETL 922
Cdd:PRK02224 644 DEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEEL 696
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
566-1269 |
4.76e-13 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 74.87 E-value: 4.76e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 566 QLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAA-KLEILQQQLQVAN--EARDSAQTSVTQAQ 642
Cdd:pfam12128 213 PPKSRLNRQQVEHWIRDIQAIAGIMKIRPEFTKLQQEFNTLESAELRLSHlHFGYKSDETLIASrqEERQETSAELNQLL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 643 REK-AELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEK-DQLQEQLQALKESLKVTKGSL-- 718
Cdd:pfam12128 293 RTLdDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQlPSWQSELENLEERLKALTGKHqd 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 719 --EEEKRRAADALEEQQRCISELKAETRslveqhkrerkeleeeragrKGLEARLQQLGEAhQAETEVLRRELAEAMAAQ 796
Cdd:pfam12128 373 vtAKYNRRRSKIKEQNNRDIAGIKDKLA--------------------KIREARDRQLAVA-EDDLQALESELREQLEAG 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 797 HTAESECEQLVKEVAAWreryEDSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVagieshselqiSRQQNELAE 876
Cdd:pfam12128 432 KLEFNEEEYRLKSRLGE----LKLRLNQATATPELLLQLENFDERIERAREEQEAANAEV-----------ERLQSELRQ 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 877 LHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVarLETLVRKAGEQQETASRELVKEPARAGDRQPEWLEEQ- 955
Cdd:pfam12128 497 ARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTL--LHFLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSv 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 956 -QGRQFCSTQAALQAMER-EAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMR 1033
Cdd:pfam12128 575 gGELNLYGVKLDLKRIDVpEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLD 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1034 LQNALNEQRVEFATLQEALahalteKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLakkekehasgsgaqseaag 1113
Cdd:pfam12128 655 LRRLFDEKQSEKDKKNKAL------AERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQK------------------- 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1114 rTEPTGPKLEALRAEVSKLEQQCqkqqeqaDSLERSLEAERASRAERDSALETlqgQLEEKAQELGHSQSALASAQRELA 1193
Cdd:pfam12128 710 -REARTEKQAYWQVVEGALDAQL-------ALLKAAIAARRSGAKAELKALET---WYKRDLASLGVDPDVIAKLKREIR 778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1194 AFRTKV----QDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERL 1269
Cdd:pfam12128 779 TLERKIeriaVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRL 858
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
217-715 |
1.37e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 73.13 E-value: 1.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 217 RRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAaspLEPKELEELRDKNESLTMRLHETL 296
Cdd:TIGR04523 162 NDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNK---SLESQISELKKQNNQLKDNIEKKQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 297 KQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWL----EKQAQLEKELSAALQD 372
Cdd:TIGR04523 239 QEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISdlnnQKEQDWNKELKSELKN 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 373 KkclEEKNEILQGKLSQLEEHLSQLQDnppqekgevlgdvlQLETLKQEAATLAANNTQLQARVEmletERGQQEAKLLA 452
Cdd:TIGR04523 319 Q---EKKLEEIQNQISQNNKIISQLNE--------------QISQLKKELTNSESENSEKQRELE----EKQNEIEKLKK 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 453 ERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQahgaRLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQ 532
Cdd:TIGR04523 378 ENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIK----KLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKE 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 533 AQLAQTLQQQEQASQGL----------RHQVEQLSSSLKQKEQQLKEVA------EKQEATRQDHAQQLATAAEEREASL 596
Cdd:TIGR04523 454 LIIKNLDNTRESLETQLkvlsrsinkiKQNLEQKQKELKSKEKELKKLNeekkelEEKVKDLTKKISSLKEKIEKLESEK 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 597 RERDAALKQLEALEKE-----KAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELsrkVEELQACVETARQEQHEAQA 671
Cdd:TIGR04523 534 KEKESKISDLEDELNKddfelKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQEL---IDQKEKEKKDLIKEIEEKEK 610
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 2217283087 672 QVAELELQLRSEQQK----ATEKERVAQEKDQLQEQLQALKESLKVTK 715
Cdd:TIGR04523 611 KISSLEKELEKAKKEneklSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1014-1692 |
1.50e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.56 E-value: 1.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1014 GRAQADLALEKAaRAELEM------RLQNALNEQRVEFATLQEALAHALTEKEGKDQE--------LAKLRGLEA--AQI 1077
Cdd:TIGR02169 164 GVAEFDRKKEKA-LEELEEveenieRLDLIIDEKRQQLERLRREREKAERYQALLKEKreyegyelLKEKEALERqkEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1078 -KELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGP--------KLEALRAEVSKLEQQCQKQQEQADSLER 1148
Cdd:TIGR02169 243 eRQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEeeqlrvkeKIGELEAEIASLERSIAEKERELEDAEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1149 SLEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVargrqeaerknsliS 1228
Cdd:TIGR02169 323 RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDEL--------------K 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1229 SLEEEVSILNRqvlekegESKELKRLVMAESEKSQKLEERLRLLQAETasnsARAAERSSALREEVQSLREEAEKQRvas 1308
Cdd:TIGR02169 389 DYREKLEKLKR-------EINELKRELDRLQEELQRLSEELADLNAAI----AGIEAKINELEEEKEDKALEIKKQE--- 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1309 enlrqeltsqaERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKhlcqQLQAEQAAAEKRHREELEQS 1388
Cdd:TIGR02169 455 -----------WKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQA----RASEERVRGGRAVEEVLKAS 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1389 KQAAGGLRAELLRAQRELGELIP------LRQKVAEQERTAQQ----LRAEKASYAEQLSMLKKAHGLLaeENRGLGERA 1458
Cdd:TIGR02169 520 IQGVHGTVAQLGSVGERYATAIEvaagnrLNNVVVEDDAVAKEaielLKRRKAGRATFLPLNKMRDERR--DLSILSEDG 597
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1459 NLGRQFLEVELDQAREK----------YVQELAAVR-------------------------ADAETRLAEVQR----EAQ 1499
Cdd:TIGR02169 598 VIGFAVDLVEFDPKYEPafkyvfgdtlVVEDIEAARrlmgkyrmvtlegelfeksgamtggSRAPRGGILFSRsepaELQ 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1500 STARELEVMTAKYEGAKVKVLEERQRFQEERQKL---TAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQ 1576
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELsdaSRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1577 AQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDakkqqNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAE 1656
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNDLEARLS-----HSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLE 832
|
730 740 750
....*....|....*....|....*....|....*.
gi 2217283087 1657 QTCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDA 1692
Cdd:TIGR02169 833 KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEE 868
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
350-1102 |
5.32e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 71.54 E-value: 5.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 350 KATQEWLEKQAQLEKELSAALQDKKcLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANN 429
Cdd:pfam02463 146 IIAMMKPERRLEIEEEAAGSRLKRK-KKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEE 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 430 TQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTT 509
Cdd:pfam02463 225 YLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLK 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 510 LNATIQQQDQELAGLKQQAKEKQAQLAqtlqqqeqasqglrhQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAA 589
Cdd:pfam02463 305 LERRKVDDEEKLKESEKEKKKAEKELK---------------KEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLE 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 590 EEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETArQEQHEA 669
Cdd:pfam02463 370 QLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELK-QGKLTE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 670 QAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:pfam02463 449 EKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 750 HKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGA 829
Cdd:pfam02463 529 GRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQL 608
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 830 MFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKM 909
Cdd:pfam02463 609 DKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESE 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 910 AATSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREA----EQMGNELERLR 985
Cdd:pfam02463 689 LAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEksrlKKEEKEEEKSE 768
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 986 AALMESQGQQQEERGQQEREVARLTQERGRAQADLA------LEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEK 1059
Cdd:pfam02463 769 LSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRaleeelKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKL 848
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 2217283087 1060 EGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHA 1102
Cdd:pfam02463 849 EKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESK 891
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
460-1100 |
1.19e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 70.33 E-value: 1.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 460 EKQQLSSLITDLQSSISNLSQAKEELEQASQAhgARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTL 539
Cdd:COG4913 219 EEPDTFEAADALVEHFDDLERAHEALEDAREQ--IELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 540 QqqeqasQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQqlataaeereASLRERDAALKQLEALEKEKA---AK 616
Cdd:COG4913 297 L------EELRAELARLEAELERLEARLDALREELDELEAQIRG----------NGGDRLEQLEREIERLERELEereRR 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 617 LEILQQQLQVANEA----RDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRS-EQQKATEKE 691
Cdd:COG4913 361 RARLEALLAALGLPlpasAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASlERRKSNIPA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 692 RVAQEKDQLQEQLQALKESLK-----VTKGSLEEEKRRAADAL----------EEQQ-----RCISELKAETRSLVEQHK 751
Cdd:COG4913 441 RLLALRDALAEALGLDEAELPfvgelIEVRPEEERWRGAIERVlggfaltllvPPEHyaaalRWVNRLHLRGRLVYERVR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 752 RERKELEEERAGRKGLEARLQ-QLGEAHQAetevLRRELAEAMAAqHTAESEcEQLVKE---------VAAWRERYE--D 819
Cdd:COG4913 521 TGLPDPERPRLDPDSLAGKLDfKPHPFRAW----LEAELGRRFDY-VCVDSP-EELRRHpraitragqVKGNGTRHEkdD 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 820 SQQEEAQY--GAMFQEQLMTLKEECEKARQELQEAKEKVAgieshselQISRQQNELAELHANLARaLQQVQEKEVRAQK 897
Cdd:COG4913 595 RRRIRSRYvlGFDNRAKLAALEAELAELEEELAEAEERLE--------ALEAELDALQERREALQR-LAEYSWDEIDVAS 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 898 LADDLSTLQEKMA---ATSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQPEW--LEEQqgrqfcstQAALQAMER 972
Cdd:COG4913 666 AEREIAELEAELErldASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELeqAEEE--------LDELQDRLE 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 973 EAEQMGNELERLRAalmESQGQQQEERGQQEREVARLTQERGRAQADLAlekaaraelemRLQNALNEQRVEFATLQEAL 1052
Cdd:COG4913 738 AAEDLARLELRALL---EERFAAALGDAVERELRENLEERIDALRARLN-----------RAEEELERAMRAFNREWPAE 803
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 2217283087 1053 AHAL-TEKEGKDQELAKLRGLEAAQIKELEElrqtvkQLKEQLAKKEKE 1100
Cdd:COG4913 804 TADLdADLESLPEYLALLDRLEEDGLPEYEE------RFKELLNENSIE 846
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
402-1100 |
2.49e-11 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 69.23 E-value: 2.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 402 PQEKGEVLGDVLQLETLKQEAATLAANNTQ-------LQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSS 474
Cdd:TIGR00618 162 SKEKKELLMNLFPLDQYTQLALMEFAKKKSlhgkaelLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQS 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 475 ISNLSQAKEELEQASQAHgaRLTAQVASLTSELTTLNATIQQQDQELaglKQQAKEKQAQLAQTLQQQEQASQGLRHQVE 554
Cdd:TIGR00618 242 HAYLTQKREAQEEQLKKQ--QLLKQLRARIEELRAQEAVLEETQERI---NRARKAAPLAAHIKAVTQIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 555 QLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVaneardsa 634
Cdd:TIGR00618 317 QSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQK-------- 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 635 qTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEkdQLQEQLQALKESLKVT 714
Cdd:TIGR00618 389 -TTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITC--TAQCEKLEKIHLQESA 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 715 KGSLEEEKrraadaLEEQQRCISELKAETRSLVEQHKRERKELEEERAGR-KGLEARLQQLG--EAHQAETEVLRRELAE 791
Cdd:TIGR00618 466 QSLKEREQ------QLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGScIHPNPARQDIDnpGPLTRRMQRGEQTYAQ 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 792 AMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQEqlmtLKEECEKARQELQEakekvagieshselqISRQQ 871
Cdd:TIGR00618 540 LETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNR----SKEDIPNLQNITVR---------------LQDLT 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 872 NELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLvrkageqQETASRELVKEPARAGDRQPEW 951
Cdd:TIGR00618 601 EKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHAL-------QLTLTQERVREHALSIRVLPKE 673
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 952 LEEQQgrqfcstQAALQAMEREAEQMGNELERLrAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELE 1031
Cdd:TIGR00618 674 LLASR-------QLALQKMQSEKEQLTYWKEML-AQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSL 745
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217283087 1032 MRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKE 1100
Cdd:TIGR00618 746 KELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPS 814
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
205-828 |
3.43e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.94 E-value: 3.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 205 MGDILQTPQFQMRRLKKQLADErsnrDELELELAENRKLLTEKDAQIAMMQQRIDRLAllnEKQAASPLEPKELEELRDK 284
Cdd:PRK03918 167 LGEVIKEIKRRIERLEKFIKRT----ENIEELIKEKEKELEEVLREINEISSELPELR---EELEKLEKEVKELEELKEE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 285 NESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFAShLQQLQDALNELTEEHSkatqEWLEKQAQLEK 364
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE-LKEKAEEYIKLSEFYE----EYLDELREIEK 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 365 ELSAALQDKKCLEEKNEILQGKLSQLEEhLSQLQDNPPQEKGEVLGDVLQLETLKQeaatLAANNTQLQARVEMLETERG 444
Cdd:PRK03918 315 RLSRLEEEINGIEERIKELEEKEERLEE-LKKKLKELEKRLEELEERHELYEEAKA----KKEELERLKKRLTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 445 QQEAKLLAERG-HFEEEKQQLSSLITDLQSSISNLSQAKEELEQA-----------SQAHGARLtaqVASLTSELTTLNA 512
Cdd:PRK03918 390 EKELEELEKAKeEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkcpvcgrelTEEHRKEL---LEEYTAELKRIEK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 513 TIQQQDQELAGLKQQAKEKQAQLAQtlqqqeqasqglrhqvEQLSSSLKQKEQQLKEVAEKQEATrqdHAQQLATAAEER 592
Cdd:PRK03918 467 ELKEIEEKERKLRKELRELEKVLKK----------------ESELIKLKELAEQLKELEEKLKKY---NLEELEKKAEEY 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 593 EASLRERDAALKQLEALEKEkAAKLEILQQQLQVANEARDSaqtsvtqAQREKAELSRKVEELQ-ACVEtarqeqhEAQA 671
Cdd:PRK03918 528 EKLKEKLIKLKGEIKSLKKE-LEKLEELKKKLAELEKKLDE-------LEEELAELLKELEELGfESVE-------ELEE 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 672 QVAELE------LQLRSEQQkatEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRaadaLEEQQRCISElkaetrs 745
Cdd:PRK03918 593 RLKELEpfyneyLELKDAEK---ELEREEKELKKLEEELDKAFEELAETEKRLEELRKE----LEELEKKYSE------- 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 746 lvEQHKRERKELEEERAGRKGLEARLQQLgEAHQAETEVLRRELAEAMAAQHTAESECEQLVK---EVAAWRERYEDSQQ 822
Cdd:PRK03918 659 --EEYEELREEYLELSRELAGLRAELEEL-EKRREEIKKTLEKLKEELEEREKAKKELEKLEKaleRVEELREKVKKYKA 735
|
....*.
gi 2217283087 823 EEAQYG 828
Cdd:PRK03918 736 LLKERA 741
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
276-890 |
1.22e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 67.25 E-value: 1.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 276 KELEELRDKNESLT--MRLHETLKQCQDLKTEKSQMDRKIN--QLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKA 351
Cdd:COG4913 242 EALEDAREQIELLEpiRELAERYAAARERLAELEYLRAALRlwFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 352 TQEWLEKQAQLekeLSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDnppqekgevLGDVLQLeTLKQEAATLAANNTQ 431
Cdd:COG4913 322 REELDELEAQI---RGNGGDRLEQLEREIERLERELEERERRRARLEA---------LLAALGL-PLPASAEEFAALRAE 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 432 LQARVEMLETERG---QQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLS----QAKEELEQASQA------------- 491
Cdd:COG4913 389 AAALLEALEEELEaleEALAEAEAALRDLRRELRELEAEIASLERRKSNIParllALRDALAEALGLdeaelpfvgelie 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 492 ----------------HGARLT--------AQVAS------LTSELTTlnatiqqqdqelaglkqqakEKQAQLAQTLQQ 541
Cdd:COG4913 469 vrpeeerwrgaiervlGGFALTllvppehyAAALRwvnrlhLRGRLVY--------------------ERVRTGLPDPER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 542 QEQASQGLRHQVE----QLSSSLKQkeqqlkEVAEKQEATRQDHAQQLATaaEER----------EASLRERDAALKQLE 607
Cdd:COG4913 529 PRLDPDSLAGKLDfkphPFRAWLEA------ELGRRFDYVCVDSPEELRR--HPRaitragqvkgNGTRHEKDDRRRIRS 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 608 A--LEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQ--HEAQAQVAELELQLRSE 683
Cdd:COG4913 601 RyvLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERL 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 684 QQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCiselkaetrslveQHKRERKELEEERAG 763
Cdd:COG4913 681 DASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDEL-------------QDRLEAAEDLARLEL 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 764 RKGLEARLQQLG--EAHQAETEVLRRELAEAMAAQHTAEsecEQLVKEVAAWRERYEDSQQE---EAQYGAMFQEQLMTL 838
Cdd:COG4913 748 RALLEERFAAALgdAVERELRENLEERIDALRARLNRAE---EELERAMRAFNREWPAETADldaDLESLPEYLALLDRL 824
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 839 KEEcekarqELQEAKEKVAgieshsELQISRQQNELAELHANLARALQQVQE 890
Cdd:COG4913 825 EED------GLPEYEERFK------ELLNENSIEFVADLLSKLRRAIREIKE 864
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
478-985 |
1.79e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.60 E-value: 1.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 478 LSQAKEELEQASQAHgarLTAQVASLTSELTTLNATI---QQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVE 554
Cdd:PRK02224 189 LDQLKAQIEEKEEKD---LHERLNGLESELAELDEEIeryEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 555 QLSSSLKQKEQqLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQ---LQVANEAR 631
Cdd:PRK02224 266 TIAETEREREE-LAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECrvaAQAHNEEA 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 632 DSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQK----ATEKERVAQEKDQLQEQLQAL 707
Cdd:PRK02224 345 ESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERfgdaPVDLGNAEDFLEELREERDEL 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 708 KESLKVTKGSLE--EEKRRAADALEEQQRC-----------ISELKAETRSLVEQHKRERKELEEERAgrkGLEARLQQL 774
Cdd:PRK02224 425 REREAELEATLRtaRERVEEAEALLEAGKCpecgqpvegspHVETIEEDRERVEELEAELEDLEEEVE---EVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 775 GEAHQAETEV----LRRELAEAMAAQHTAeseceqlvkEVAAWRERYEDSQQEEAQYGAMFQEQlmtlKEECEKARQELQ 850
Cdd:PRK02224 502 EDLVEAEDRIerleERREDLEELIAERRE---------TIEEKRERAEELRERAAELEAEAEEK----REAAAEAEEEAE 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 851 EAKEKVAGIESH-SELQISRQQ-NELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGE 928
Cdd:PRK02224 569 EAREEVAELNSKlAELKERIESlERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARI 648
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 929 QQETASRELVKEPARAGDRQPEWLEEQQGRqfcsTQAALQAMEREAEqmgnELERLR 985
Cdd:PRK02224 649 EEAREDKERAEEYLEQVEEKLDELREERDD----LQAEIGAVENELE----ELEELR 697
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1075-1648 |
2.67e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 66.09 E-value: 2.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1075 AQIKELEELRQTVKQLKEQLakkekehasgsgaqsEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAER 1154
Cdd:COG4913 232 EHFDDLERAHEALEDAREQI---------------ELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1155 ASRAERDsaLETLQGQLEEKAQELGHSQSALASAQRELAafrtkvQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEV 1234
Cdd:COG4913 297 LEELRAE--LARLEAELERLEARLDALREELDELEAQIR------GNGGDRLEQLEREIERLERELEERERRRARLEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1235 SILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQE 1314
Cdd:COG4913 369 AALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDA 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1315 LTSQAERAE----------ELGQELKAWQEKFfqkEQALSTLQL------EHtstQALVSELLPAKHLcqqLQAEQAAAE 1378
Cdd:COG4913 449 LAEALGLDEaelpfvgeliEVRPEEERWRGAI---ERVLGGFALtllvppEH---YAAALRWVNRLHL---RGRLVYERV 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1379 KRHREELEQSKQAAGGLRAELL--------RAQRELGELIPLRqKVAeqerTAQQLRAEKASYAEQlSMLKKAHGLLA-E 1449
Cdd:COG4913 520 RTGLPDPERPRLDPDSLAGKLDfkphpfraWLEAELGRRFDYV-CVD----SPEELRRHPRAITRA-GQVKGNGTRHEkD 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1450 ENRGLGERANLG------RQFLEVELDQAREKY------VQELAAVRADAETRLAEVQREAQSTARELEVMTAKyegakv 1517
Cdd:COG4913 594 DRRRIRSRYVLGfdnrakLAALEAELAELEEELaeaeerLEALEAELDALQERREALQRLAEYSWDEIDVASAE------ 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1518 kvlEERQRFQEERQKLTA---QVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAE 1594
Cdd:COG4913 668 ---REIAELEAELERLDAssdDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAR 744
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 2217283087 1595 HYKLQmekaktHYDAKKQQNQELQEQLRSLEQLQKENKELRAEAERLGHELQQA 1648
Cdd:COG4913 745 LELRA------LLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERA 792
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
242-920 |
1.19e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 63.98 E-value: 1.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 242 KLLTEKDAQIAMMQQRI----DRL-ALLNEKQAASPL----EPKELEELRDKNESLTMRLHETLKQCQDLKTE-KSQMDR 311
Cdd:pfam15921 224 KILRELDTEISYLKGRIfpveDQLeALKSESQNKIELllqqHQDRIEQLISEHEVEITGLTEKASSARSQANSiQSQLEI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 312 KINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEwLEKQAQL-EKELSAAL-------QDKKCLEEKNEIL 383
Cdd:pfam15921 304 IQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEE-LEKQLVLaNSELTEARterdqfsQESGNLDDQLQKL 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 384 QGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETE-RGQQEAKLLAERGHfEEEKQ 462
Cdd:pfam15921 383 LADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcQGQMERQMAAIQGK-NESLE 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 463 QLSSLITDLQSSISNLSQAKEEleqasqahgarLTAQVASL-TSELTTLNATIQQQDQELAglkqqakekqaqlaqtlqq 541
Cdd:pfam15921 462 KVSSLTAQLESTKEMLRKVVEE-----------LTAKKMTLeSSERTVSDLTASLQEKERA------------------- 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 542 qeqaSQGLRHQVEQLSSSLKQKEQQLKEVaekqeATRQDHAQQLATAAEereaslrerdaALKqLEALEKEKAakLEILQ 621
Cdd:pfam15921 512 ----IEATNAEITKLRSRVDLKLQELQHL-----KNEGDHLRNVQTECE-----------ALK-LQMAEKDKV--IEILR 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 622 QQLQ-----VANEARDSAQTSVTQAQREKAELSRKVE--ELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKER-- 692
Cdd:pfam15921 569 QQIEnmtqlVGQHGRTAGAMQVEKAQLEKEINDRRLElqEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRav 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 693 --VAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLveqhkrerkeleeeragrkglear 770
Cdd:pfam15921 649 kdIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSA------------------------ 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 771 lqqlgeahQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWReryedSQQEEAQYGAMFQEQLMTlkeECEKARQELQ 850
Cdd:pfam15921 705 --------QSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKR-----GQIDALQSKIQFLEEAMT---NANKEKHFLK 768
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 851 EAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLE 920
Cdd:pfam15921 769 EEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLK 838
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
772-1329 |
2.24e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.01 E-value: 2.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 772 QQLGEAHQA------ETEVLR--RELAEAMAAQHTAESECEQLVKEVAAWR--ERYEDSQQEEAQygamFQEQLMTLKEE 841
Cdd:COG4913 235 DDLERAHEAledareQIELLEpiRELAERYAAARERLAELEYLRAALRLWFaqRRLELLEAELEE----LRAELARLEAE 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 842 CEKARQELQEAKEKVAgieshsELQISRQQN---ELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVAR 918
Cdd:COG4913 311 LERLEARLDALREELD------ELEAQIRGNggdRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAA 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 919 LETLVRKAGEQQETASRELVKEPARAGDRqpewlEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALmesqgQQQEE 998
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEALAEAEAA-----LRDLRRELRELEAEIASLERRKSNIPARLLALRDAL-----AEALG 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 999 RGQQEREVA------RLTQERGRAQADLAL-------------EKAARAELE-MRLQNALNEQRVEFATLQEA------- 1051
Cdd:COG4913 455 LDEAELPFVgelievRPEEERWRGAIERVLggfaltllvppehYAAALRWVNrLHLRGRLVYERVRTGLPDPErprldpd 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1052 -LAHALTEKEGK-----DQELAklRGLEAAQIKELEELRQT---------VKQLKEQLAKKEKEHASGS---GAQSEAag 1113
Cdd:COG4913 535 sLAGKLDFKPHPfrawlEAELG--RRFDYVCVDSPEELRRHpraitragqVKGNGTRHEKDDRRRIRSRyvlGFDNRA-- 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1114 rteptgpKLEALRAEVSKLEQQCQKqqeqADSLERSLEAERASRAERDSALETLQGQLEEkaqelghsQSALASAQRELA 1193
Cdd:COG4913 611 -------KLAALEAELAELEEELAE----AEERLEALEAELDALQERREALQRLAEYSWD--------EIDVASAEREIA 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1194 AFRTKvqdhskaedewkaqvargRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQ 1273
Cdd:COG4913 672 ELEAE------------------LERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQ 733
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217283087 1274 AETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQEL 1329
Cdd:COG4913 734 DRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
406-647 |
2.71e-09 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 62.93 E-value: 2.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 406 GEVLGDVLQLETLKQEAATLAANNTQLQARVEMLetergQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKeeL 485
Cdd:NF012221 1528 GYILDNVVATSESSQQADAVSKHAKQDDAAQNAL-----ADKERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNA--L 1600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 486 EQASQAHGARLTAQVASLTSELTTLNATIQQ---QDQELAGLKQQAKEKQAQLAQTLQQQEQASQGL--RHQVEQLSSSL 560
Cdd:NF012221 1601 ETNGQAQRDAILEESRAVTKELTTLAQGLDAldsQATYAGESGDQWRNPFAGGLLDRVQEQLDDAKKisGKQLADAKQRH 1680
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 561 KQKEQQLKEVAEKQEA--TRQDHAQQLATAAEER---EASLRERDAALKQLEALEKEKAAKLeilqqqlqVANEARDSAQ 635
Cdd:NF012221 1681 VDNQQKVKDAVAKSEAgvAQGEQNQANAEQDIDDakaDAEKRKDDALAKQNEAQQAESDANA--------AANDAQSRGE 1752
|
250
....*....|..
gi 2217283087 636 TSVTQAQREKAE 647
Cdd:NF012221 1753 QDASAAENKANQ 1764
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
431-928 |
2.74e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 62.48 E-value: 2.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 431 QLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEqasqahgaRLTAQVASLTSELTTL 510
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELE--------ELEAELEELREELEKL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 511 NATIQQQD--QELAGLKQQAKEKQAQLAQTLQQQEQASQgLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATA 588
Cdd:COG4717 122 EKLLQLLPlyQELEALEAELAELPERLEELEERLEELRE-LEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 589 AEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQrekAELSRKVEELQACVETARQEQHE 668
Cdd:COG4717 201 LEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLI---AAALLALLGLGGSLLSLILTIAG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 669 AQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQAL-KESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLV 747
Cdd:COG4717 278 VLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELeEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 748 EQHKRERkeleeeragRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAwrERYEDSQQEEAQY 827
Cdd:COG4717 358 ELEEELQ---------LEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEE--LLGELEELLEALD 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 828 GAMFQEQLMTLKEECEKARQELQEAKEKVAGIEshSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQE 907
Cdd:COG4717 427 EEELEEELEELEEELEELEEELEELREELAELE--AELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEE 504
|
490 500
....*....|....*....|.
gi 2217283087 908 KMAATSKEvaRLETLVRKAGE 928
Cdd:COG4717 505 AREEYREE--RLPPVLERASE 523
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1060-1651 |
7.08e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.23 E-value: 7.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1060 EGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHAsgsgaqsEAAGRTEPTGPKLEALRAEVSKLEQQCQKQ 1139
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELE-------EVLREINEISSELPELREELEKLEKEVKEL 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1140 QEQADSLErSLEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAE---DEWKAQVARG 1216
Cdd:PRK03918 234 EELKEEIE-ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSefyEEYLDELREI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1217 RQEAERKNSLISSLEEEVSILNrqvlEKEGESKELKRLVMAESEKSQKLEERLRLLqaetasnsaraaERSSALREEVQS 1296
Cdd:PRK03918 313 EKRLSRLEEEINGIEERIKELE----EKEERLEELKKKLKELEKRLEELEERHELY------------EEAKAKKEELER 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1297 LREEAEKQRVasENLRQELTSQAERAEELGQELKAWQEKffqkeqaLSTLQLEHTSTQALVSELLPAKHLC-----QQLQ 1371
Cdd:PRK03918 377 LKKRLTGLTP--EKLEKELEELEKAKEEIEEEISKITAR-------IGELKKEIKELKKAIEELKKAKGKCpvcgrELTE 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1372 AEQAAAEKRHREEL---EQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASY----AEQLSMLKKAH 1444
Cdd:PRK03918 448 EHRKELLEEYTAELkriEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLkkynLEELEKKAEEY 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1445 GLLAEENRGL-GERANLGRqflEVELDQAREKYVQELAAVRADAETRLAEVQR-----------EAQSTARELEVMTAKY 1512
Cdd:PRK03918 528 EKLKEKLIKLkGEIKSLKK---ELEKLEELKKKLAELEKKLDELEEELAELLKeleelgfesveELEERLKELEPFYNEY 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1513 EGAKvKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQggESQQEAQRLQAQLNELQAQLSQKEQA 1592
Cdd:PRK03918 605 LELK-DAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKK--YSEEEYEELREEYLELSRELAGLRAE 681
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 1593 AEHYKLQMEKAKTHYD---AKKQQNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLK 1651
Cdd:PRK03918 682 LEELEKRREEIKKTLEklkEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALS 743
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
236-682 |
7.68e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 60.94 E-value: 7.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 236 ELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEELRDKNESLTmRLHETLKQCQDLKTEKSQMDRKINQ 315
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLL-QLLPLYQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 316 LSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLS 395
Cdd:COG4717 151 LEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 396 QLQDN-PPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSS 474
Cdd:COG4717 231 QLENElEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 475 ISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLnATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLrhqvE 554
Cdd:COG4717 311 PALEELEEEELEELLAALGLPPDLSPEELLELLDRI-EELQELLREAEELEEELQLEELEQEIAALLAEAGVEDE----E 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 555 QLSSSLKQKEQQLKEVAEKQEATRQdhaqqLATAAEEREASLRERDaalkqlealekekaakLEILQQQLQVANEARDSA 634
Cdd:COG4717 386 ELRAALEQAEEYQELKEELEELEEQ-----LEELLGELEELLEALD----------------EEELEEELEELEEELEEL 444
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2217283087 635 QTSVTQAQREKAELSRKVEEL--QACVETARQEQHEAQAQVAELELQLRS 682
Cdd:COG4717 445 EEELEELREELAELEAELEQLeeDGELAELLQELEELKAELRELAEEWAA 494
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
215-745 |
9.21e-09 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 60.52 E-value: 9.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 215 QMRRLKKQLADE-RSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEELRDKN-ESLTMRL 292
Cdd:pfam05557 13 QLQNEKKQMELEhKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYlEALNKKL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 293 HETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQLeKELSAALQD 372
Cdd:pfam05557 93 NEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQ-SSLAEAEQR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 373 KKCLEEKNeilqgklsQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAA---TLAANNTQLQARVEMLETERGQQE-- 447
Cdd:pfam05557 172 IKELEFEI--------QSQEQDSEIVKNSKSELARIPELEKELERLREHNKhlnENIENKLLLKEEVEDLKRKLEREEky 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 448 ----AKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGArLTAQVASLTSELTTLNATIQQQDQELAG 523
Cdd:pfam05557 244 reeaATLELEKEKLEQELQSWVKLAQDTGLNLRSPEDLSRRIEQLQQREIV-LKEENSSLTSSARQLEKARRELEQELAQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 524 LKQQAKEKQAQLAQTLQQQEQASQ----------GLRHQVEQLSSSLKQKE--QQLKEVAEKQEATRQDHAQQLATAAEE 591
Cdd:pfam05557 323 YLKKIEDLNKKLKRHKALVRRLQRrvllltkerdGYRAILESYDKELTMSNysPQLLERIEEAEDMTQKMQAHNEEMEAQ 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 592 REASLRERDAALKQLEALEKEkaakLEILQQQLQVANeardsaqtsVTQAQREKAELSRKVEELQACVETARQEQHEAQA 671
Cdd:pfam05557 403 LSVAEEELGGYKQQAQTLERE----LQALRQQESLAD---------PSYSKEEVDSLRRKLETLELERQRLREQKNELEM 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 672 QVAELELQLRSEQQK-----------ATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELK 740
Cdd:pfam05557 470 ELERRCLQGDYDPKKtkvlhlsmnpaAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLDLR 549
|
....*
gi 2217283087 741 AETRS 745
Cdd:pfam05557 550 KELES 554
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1008-1331 |
1.21e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.44 E-value: 1.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1008 RLTQERGRAQADLALEKAARAELEMRLQnALNEQRVEFATLQEALAHALTEKEGKDQELAKLR----------------- 1070
Cdd:PRK02224 224 RYEEQREQARETRDEADEVLEEHEERRE-ELETLEAEIEDLRETIAETEREREELAEEVRDLRerleeleeerddllaea 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1071 GLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAgrteptgpklEALRAEVSKLEQQCQKQQEQADSLERSL 1150
Cdd:PRK02224 303 GLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEA----------ESLREDADDLEERAEELREEAAELESEL 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1151 EAERASRAERDSALETLQGQLEEKAQ-------ELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQ----- 1218
Cdd:PRK02224 373 EEAREAVEDRREEIEELEEEIEELRErfgdapvDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAlleag 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1219 ----------------EAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRL--LQAETASNS 1280
Cdd:PRK02224 453 kcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLeeLIAERRETI 532
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 1281 ARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKA 1331
Cdd:PRK02224 533 EEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAE 583
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
220-1051 |
1.31e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 60.37 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 220 KKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALlnEKQAASPLEPKELEELRDKNESLTMRLHETLKQC 299
Cdd:pfam02463 180 EETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEE--EYLLYLDYLKLNEERIDLLQELLRDEQEEIESSK 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 300 QDLKTEKSQMDRKINQLSEENGDLSFKLREFASH------LQQLQDALNELTEEHSKATQEWLEKQAQLEKELSAALQDK 373
Cdd:pfam02463 258 QEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLakeeeeLKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEI 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 374 KCLEEKNEILQGKLSQLEEHLSQLQDNppQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKllae 453
Cdd:pfam02463 338 EELEKELKELEIKREAEEEEEEELEKL--QEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLL---- 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 454 rghfeEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQA 533
Cdd:pfam02463 412 -----ELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 534 QLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEK 613
Cdd:pfam02463 487 ELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 614 AAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARqeQHEAQAQVAELELQLRSEQQKATEKERV 693
Cdd:pfam02463 567 VRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEAD--EDDKRAKVVEGILKDTELTKLKESAKAK 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 694 AQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRS-----LVEQHKRERKELEEERAGRKGLE 768
Cdd:pfam02463 645 ESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRrqleiKKKEQREKEELKKLKLEAEELLA 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 769 ARLQQLGEAHQAETEVLRRELAEAMA----AQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQEQLMTLKEECEK 844
Cdd:pfam02463 725 DRVQEAQDKINEELKLLKQKIDEEEEeeekSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELR 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 845 ARQELQEAKEKVAGIESHSELQISRQQNELAELHANLAralqqvqEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVR 924
Cdd:pfam02463 805 ALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALEL-------KEEQKLEKLAEEELERLEEEITKEELLQELLLKEE 877
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 925 KAGEQQETASRELVKEPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELErlraalMESQGQQQEERGQQER 1004
Cdd:pfam02463 878 ELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEE------EPEELLLEEADEKEKE 951
|
810 820 830 840
....*....|....*....|....*....|....*....|....*..
gi 2217283087 1005 EVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEA 1051
Cdd:pfam02463 952 ENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKE 998
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
547-749 |
2.31e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.62 E-value: 2.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 547 QGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQ---DHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQ 623
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERriaALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 624 LQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQ 703
Cdd:COG4942 110 LRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAA 189
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2217283087 704 LQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG4942 190 LEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
327-1112 |
2.36e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 59.75 E-value: 2.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 327 LREFASHLQQLQDALNELTEEHSKatQEWLEKQAQLEkeLSAALQDKKCLEEKNEILQGKLSQLEEHL-SQLQDNppqek 405
Cdd:pfam15921 80 LEEYSHQVKDLQRRLNESNELHEK--QKFYLRQSVID--LQTKLQEMQMERDAMADIRRRESQSQEDLrNQLQNT----- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 406 gevlgdVLQLETLKQ-EAATLAANNTQLQARVEMLETERG-------------QQEAKLLAERG-----HFEEEKQQLSS 466
Cdd:pfam15921 151 ------VHELEAAKClKEDMLEDSNTQIEQLRKMMLSHEGvlqeirsilvdfeEASGKKIYEHDsmstmHFRSLGSAISK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 467 LITDLQSSISNL---------------SQAKEELEQASQAHGARLTAQVASLTSELTTLNatiqqqdQELAGLKQQAKEK 531
Cdd:pfam15921 225 ILRELDTEISYLkgrifpvedqlealkSESQNKIELLLQQHQDRIEQLISEHEVEITGLT-------EKASSARSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 532 QAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALE- 610
Cdd:pfam15921 298 QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDd 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 611 --KEKAAKLEILQQQLQVANEA------RDSAQT-SVTQAQREKAELSRKVEELQACVETARQEQHeaqaqvAELELQLR 681
Cdd:pfam15921 378 qlQKLLADLHKREKELSLEKEQnkrlwdRDTGNSiTIDHLRRELDDRNMEVQRLEALLKAMKSECQ------GQMERQMA 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 682 SEQQKATEKERVAQEKDQLQ---EQLQALKESLKVTKGSLEEEKRRAAD---ALEEQQRCISELKAETRSLveqhkrerk 755
Cdd:pfam15921 452 AIQGKNESLEKVSSLTAQLEstkEMLRKVVEELTAKKMTLESSERTVSDltaSLQEKERAIEATNAEITKL--------- 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 756 eleeeragRKGLEARLQQLGEAH---------QAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQ 826
Cdd:pfam15921 523 --------RSRVDLKLQELQHLKnegdhlrnvQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQ 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 827 YGAMFQEQLMTLKE---ECEKARQELQEAKEKVAGIESHSELQI---SRQQNELAELHANLARALQQVQEKEVRAQKLAD 900
Cdd:pfam15921 595 LEKEINDRRLELQEfkiLKDKKDAKIRELEARVSDLELEKVKLVnagSERLRAVKDIKQERDQLLNEVKTSRNELNSLSE 674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 901 DLSTLQEKMAATSKEvarLETLVRKAGEQQETASRELvkEPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNE 980
Cdd:pfam15921 675 DYEVLKRNFRNKSEE---METTTNKLKMQLKSAQSEL--EQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSK 749
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 981 LERLRAALMESQGQQ---QEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQN---ALNEQRVEFATLQEALah 1054
Cdd:pfam15921 750 IQFLEEAMTNANKEKhflKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANmevALDKASLQFAECQDII-- 827
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 1055 altekEGKDQELAKLRGLEAAQIKELE----ELRQTVKQLKEQLAKKEKEHASGSGAQSEAA 1112
Cdd:pfam15921 828 -----QRQEQESVRLKLQHTLDVKELQgpgyTSNSSMKPRLLQPASFTRTHSNVPSSQSTAS 884
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
662-1192 |
2.62e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.54 E-value: 2.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 662 ARQEQHEAQAQVAELElQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKG-----SLEEEKRRAADALEEQQRCI 736
Cdd:COG4913 240 AHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLeaeleELRAELARLEAELERLEARL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 737 SELKAETRSLVEQHkrerkeleeerAGRKGleARLQQLgeahQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRER 816
Cdd:COG4913 319 DALREELDELEAQI-----------RGNGG--DRLEQL----EREIERLERELEERERRRARLEALLAALGLPLPASAEE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 817 YEDSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIEshSELQISRQQN-----ELAELHANLARALQ----- 886
Cdd:COG4913 382 FAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE--AEIASLERRKsnipaRLLALRDALAEALGldeae 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 887 --------QVQEKE-------------------------------VRAQKLADDLSTLQEKMAATSKEVARLE--TLVRK 925
Cdd:COG4913 460 lpfvgeliEVRPEEerwrgaiervlggfaltllvppehyaaalrwVNRLHLRGRLVYERVRTGLPDPERPRLDpdSLAGK 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 926 ageqqetasreLVKEPARAGDrqpeWLEEQQGRQF----CSTQAALQAMER---EAEQMGNELERLRAALMESQGQQQEE 998
Cdd:COG4913 540 -----------LDFKPHPFRA----WLEAELGRRFdyvcVDSPEELRRHPRaitRAGQVKGNGTRHEKDDRRRIRSRYVL 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 999 RGQQEREVARLTQERGRAQADLALEKAARAELEmRLQNALNEQRVEFATLQEaLAHALTEKEGKDQELAKLRgleaAQIK 1078
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALE-AELDALQERREALQRLAE-YSWDEIDVASAEREIAELE----AELE 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1079 ELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRA 1158
Cdd:COG4913 679 RLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAA 758
|
570 580 590
....*....|....*....|....*....|....
gi 2217283087 1159 ERDSALETLQGQLEEKAQELghsQSALASAQREL 1192
Cdd:COG4913 759 LGDAVERELRENLEERIDAL---RARLNRAEEEL 789
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1122-1598 |
6.15e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.86 E-value: 6.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1122 LEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQELghsqsalASAQRELAAFRTKVQD 1201
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL-------EELEAELEELREELEK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1202 HSKAEDEWKAqvargRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSA 1281
Cdd:COG4717 121 LEKLLQLLPL-----YQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1282 RAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQA-LSTLQLEHTSTQALVSEL 1360
Cdd:COG4717 196 DLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAaLLALLGLGGSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1361 LPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAellraqrelgeliplrQKVAEQERTAQQLRAEKASYAEQLSML 1440
Cdd:COG4717 276 AGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPA----------------LEELEEEELEELLAALGLPPDLSPEEL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1441 KKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVL 1520
Cdd:COG4717 340 LELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1521 EERQRFQEERqkLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGG--ESQQEAQRLQAQLNELQAQLSQKEQAAEHYKL 1598
Cdd:COG4717 420 ELLEALDEEE--LEEELEELEEELEELEEELEELREELAELEAELEqlEEDGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
215-746 |
7.32e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 57.74 E-value: 7.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 215 QMRRLKKQLADERSNRDELELELAENRklltEKDAQIAMMQQRIDRLallNEKQAASPlepKELEELRDKNESLTMRLHE 294
Cdd:PRK02224 221 EIERYEEQREQARETRDEADEVLEEHE----ERREELETLEAEIEDL---RETIAETE---REREELAEEVRDLRERLEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 295 TLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKAT----------QEWLEKQAQLEK 364
Cdd:PRK02224 291 LEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRedaddleeraEELREEAAELES 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 365 ELSAALQDKKCLEEKNEILQGKLSQLEE----------HLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQA 434
Cdd:PRK02224 371 ELEEAREAVEDRREEIEELEEEIEELRErfgdapvdlgNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLE 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 435 RVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHgarltAQVASLTSELTTLNATI 514
Cdd:PRK02224 451 AGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAE-----DRIERLEERREDLEELI 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 515 QQQDQELAGLKQQAKEkqaqlaqtlqqqeqasqgLRHQVEQLSSSLKQKEqqlkEVAEKQEATRQDHAQQLATAAEEREa 594
Cdd:PRK02224 526 AERRETIEEKRERAEE------------------LRERAAELEAEAEEKR----EAAAEAEEEAEEAREEVAELNSKLA- 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 595 slrERDAALKQLEALEkEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVA 674
Cdd:PRK02224 583 ---ELKERIESLERIR-TLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERA 658
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217283087 675 ElelqlrSEQQKATEK-ERVAQEKDQLQEQLQALKESLKvtkgSLEEEKRRaADALEEQQRCISELKAETRSL 746
Cdd:PRK02224 659 E------EYLEQVEEKlDELREERDDLQAEIGAVENELE----ELEELRER-REALENRVEALEALYDEAEEL 720
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
215-806 |
8.78e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 57.65 E-value: 8.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 215 QMRRLKKQLADERSNRDELELELAENRklltekdaqiammQQRIDRLALLNEKQAASPLEPKELEELRDKNESLTMRLHE 294
Cdd:COG3096 537 LLEEFCQRIGQQLDAAEELEELLAELE-------------AQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPA 603
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 295 TLKqcqdlkteksqMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELT--EEHSKATQEWLEKQA------------ 360
Cdd:COG3096 604 WLA-----------AQDALERLREQSGEALADSQEVTAAMQQLLEREREATveRDELAARKQALESQIerlsqpggaedp 672
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 361 -------QLEKELSAALQDKKCLEE-----------KNEILQGKLSQLEEHLSQLQDNPPQ----EKGEVLGDVLQLETL 418
Cdd:COG3096 673 rllalaeRLGGVLLSEIYDDVTLEDapyfsalygpaRHAIVVPDLSAVKEQLAGLEDCPEDlyliEGDPDSFDDSVFDAE 752
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 419 KQEAATLAANNtQLQARVEMLETE-------RGQQEAKLLAERghfEEEKQQLSSLITDLQSsISNLSQAKEEL--EQAS 489
Cdd:COG3096 753 ELEDAVVVKLS-DRQWRYSRFPEVplfgraaREKRLEELRAER---DELAEQYAKASFDVQK-LQRLHQAFSQFvgGHLA 827
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 490 QAHG-------ARLTAQVASLTSELTTLNATIQQQDQELAGLKQQ----AKEKQAQLAQTLQQQEQASQGLRHQVEQLSS 558
Cdd:COG3096 828 VAFApdpeaelAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQlqllNKLLPQANLLADETLADRLEELREELDAAQE 907
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 559 S---LKQKEQQLKEVAEKQEATRQDHAQ--QLATAAEEREASLRERDA---ALKQL------------EALEKEKAAKLE 618
Cdd:COG3096 908 AqafIQQHGKALAQLEPLVAVLQSDPEQfeQLQADYLQAKEQQRRLKQqifALSEVvqrrphfsyedaVGLLGENSDLNE 987
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 619 ILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQkatekERVAQEKD 698
Cdd:COG3096 988 KLRARLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEELGVQADAEAE-----ERARIRRD 1062
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 699 QLQEQLQAL---KESLKVTKGSLEEEKRRAADALEEQQRcisELKAEtRSLVEQHKRERKELEEERAGRkGLEARLQQLG 775
Cdd:COG3096 1063 ELHEELSQNrsrRSQLEKQLTRCEAEMDSLQKRLRKAER---DYKQE-REQVVQAKAGWCAVLRLARDN-DVERRLHRRE 1137
|
650 660 670
....*....|....*....|....*....|.
gi 2217283087 776 EAHQaETEVLRRELAEAMAAQHTAESECEQL 806
Cdd:COG3096 1138 LAYL-SADELRSMSDKALGALRLAVADNEHL 1167
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1076-1646 |
9.52e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 57.36 E-value: 9.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1076 QIKELEELRQTVKQLK---EQLAKKEKEHASGSGAQSEAAGRTEPTGpKLEALRAEVSKLEqqcqkqqeqaDSLERSLEA 1152
Cdd:PRK02224 160 QLGKLEEYRERASDARlgvERVLSDQRGSLDQLKAQIEEKEEKDLHE-RLNGLESELAELD----------EEIERYEEQ 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1153 ERASRAERDSALETL------QGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSL 1226
Cdd:PRK02224 229 REQARETRDEADEVLeeheerREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDAD 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1227 ISSLEEEVSILNRQvlekegeskelkrlvmaESEKSQKLEERlRLLQAETASNSARAAERSSALREEVQSLREEAEKQRV 1306
Cdd:PRK02224 309 AEAVEARREELEDR-----------------DEELRDRLEEC-RVAAQAHNEEAESLREDADDLEERAEELREEAAELES 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1307 ASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELE 1386
Cdd:PRK02224 371 ELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLE 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1387 QSKQAAGGLRAELLRAQRELGELiplRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLE 1466
Cdd:PRK02224 451 AGKCPECGQPVEGSPHVETIEED---RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAE 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1467 VE--LDQAREKyVQELAAVRADAETRlAEVQREAQSTARElevmTAKYEGAKVKVLEERQRFQEERQKLTAQVEELSKKL 1544
Cdd:PRK02224 528 RRetIEEKRER-AEELRERAAELEAE-AEEKREAAAEAEE----EAEEAREEVAELNSKLAELKERIESLERIRTLLAAI 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1545 ADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQA--------QLSQKEQAAEHYklqMEKAKTHYDAKKQQNQE 1616
Cdd:PRK02224 602 ADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAefdearieEAREDKERAEEY---LEQVEEKLDELREERDD 678
|
570 580 590
....*....|....*....|....*....|
gi 2217283087 1617 LQEQLRSLEQLQKENKELRAEAERLGHELQ 1646
Cdd:PRK02224 679 LQAEIGAVENELEELEELRERREALENRVE 708
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
866-1102 |
1.12e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.31 E-value: 1.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 866 QISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKeparag 945
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE------ 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 946 drqpewLEEQQGRQfcstQAALQAMEREAEQMGneleRLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKA 1025
Cdd:COG4942 95 ------LRAELEAQ----KEELAELLRALYRLG----RQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 1026 ARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHA 1102
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1239-1693 |
1.57e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 1.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1239 RQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAE-TASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTS 1317
Cdd:COG4913 241 HEALEDAREQIELLEPIRELAERYAAARERLAELEYLrAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDA 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1318 QAERAEEL--------GQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELlpakhlcQQLQAEQAAAEKRHREELEQSK 1389
Cdd:COG4913 321 LREELDELeaqirgngGDRLEQLEREIERLERELEERERRRARLEALLAAL-------GLPLPASAEEFAALRAEAAALL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1390 QAAGGLRAELLRAQRELG-ELIPLRQKVAEQERTAQQLRAEKASYAEQL----SMLKKAHGLLAEENRGLGEranlgrqF 1464
Cdd:COG4913 394 EALEEELEALEEALAEAEaALRDLRRELRELEAEIASLERRKSNIPARLlalrDALAEALGLDEAELPFVGE-------L 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1465 LEVELDQAR--------------------EKYVQELAAVRA----------DAETRLAEVQR---EAQSTARELEVMTAK 1511
Cdd:COG4913 467 IEVRPEEERwrgaiervlggfaltllvppEHYAAALRWVNRlhlrgrlvyeRVRTGLPDPERprlDPDSLAGKLDFKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1512 YEGAKVKVLEER---------QRFQEERQKLTA--QVEElSKKLADSDQASKVQQQ---------KLKAVQAQGGESQQE 1571
Cdd:COG4913 547 FRAWLEAELGRRfdyvcvdspEELRRHPRAITRagQVKG-NGTRHEKDDRRRIRSRyvlgfdnraKLAALEAELAELEEE 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1572 AQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQN--QELQEQLRSLEQLQKENKELRAEAERLGHELQQAG 1649
Cdd:COG4913 626 LAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEReiAELEAELERLDASSDDLAALEEQLEELEAELEELE 705
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 2217283087 1650 LKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDAL 1693
Cdd:COG4913 706 EELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRA 749
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
868-1428 |
1.83e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 868 SRQQNELAELHAnlaralqQVQEKEvrAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELvkeparagDR 947
Cdd:PRK02224 183 SDQRGSLDQLKA-------QIEEKE--EKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVL--------EE 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 948 QPEWLEEQQ--GRQFCSTQAALQAMEREAEQMGNELERLRAALMEsqgqqqeergqqerevarLTQERGRAQADLALEKA 1025
Cdd:PRK02224 246 HEERREELEtlEAEIEDLRETIAETEREREELAEEVRDLRERLEE------------------LEEERDDLLAEAGLDDA 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1026 ARAELEMRlQNALNEQRVEfatLQEALAHALTEKEGKDQELAKLRgleaaqiKELEELRQTVKQLKEQLAKKEKEHASGS 1105
Cdd:PRK02224 308 DAEAVEAR-REELEDRDEE---LRDRLEECRVAAQAHNEEAESLR-------EDADDLEERAEELREEAAELESELEEAR 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1106 GAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKA---------- 1175
Cdd:PRK02224 377 EAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEalleagkcpe 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1176 --QELGHSQSALASAQRelaafRTKVQDHSKAEDEWKAQVARGRQEAERKNSL------ISSLEEEVSILNRQVLEKEGE 1247
Cdd:PRK02224 457 cgQPVEGSPHVETIEED-----RERVEELEAELEDLEEEVEEVEERLERAEDLveaedrIERLEERREDLEELIAERRET 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1248 SKElkrlvmaESEKSQKLEERLRLLQAETASNSARAAE---RSSALREEVQSLREEAEKQRVASENLRQELTSQAERA-- 1322
Cdd:PRK02224 532 IEE-------KRERAEELRERAAELEAEAEEKREAAAEaeeEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIAda 604
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1323 ----EELGQELKAWQEKFFQKEQALSTL-----QLEHTSTQALVSELlpakhlcQQLQAEQAAAEKRHREELEQSKQAAG 1393
Cdd:PRK02224 605 edeiERLREKREALAELNDERRERLAEKrerkrELEAEFDEARIEEA-------REDKERAEEYLEQVEEKLDELREERD 677
|
570 580 590
....*....|....*....|....*....|....*
gi 2217283087 1394 GLRAELLRAQRELGELIPLRQKVAEQERTAQQLRA 1428
Cdd:PRK02224 678 DLQAEIGAVENELEELEELRERREALENRVEALEA 712
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
334-643 |
1.92e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 56.46 E-value: 1.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 334 LQQLQDALN--ELTEEHSKATQEWLEKQAQLekelsaaLQDKKCLEEKNEILQGKLSQLEEHLSQLQDNppqekgevlgd 411
Cdd:PRK11281 41 VQAQLDALNkqKLLEAEDKLVQQDLEQTLAL-------LDKIDRQKEETEQLKQQLAQAPAKLRQAQAE----------- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 412 vlqLETLKQEAATLAA------NNTQLQARVEMLETERGQQEAKLLAERGhfeeekqQLSSLITDL---QSSISNLSQAK 482
Cdd:PRK11281 103 ---LEALKDDNDEETRetlstlSLRQLESRLAQTLDQLQNAQNDLAEYNS-------QLVSLQTQPeraQAALYANSQRL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 483 EELEQ---ASQAHGARLTA-QVASLTSELTTLNATIQQQDQELAG-------LKQQAKEKqaqlaqtlqqqEQASQGLRH 551
Cdd:PRK11281 173 QQIRNllkGGKVGGKALRPsQRVLLQAEQALLNAQNDLQRKSLEGntqlqdlLQKQRDYL-----------TARIQRLEH 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 552 QVEQL-----SSSLKQKEQQLKEVAEKQEATRQDHAQQLATaaeEREASLRERDAALKQLEALEkekaaklEILQQQLQV 626
Cdd:PRK11281 242 QLQLLqeainSKRLTLSEKTVQEAQSQDEAARIQANPLVAQ---ELEINLQLSQRLLKATEKLN-------TLTQQNLRV 311
|
330
....*....|....*..
gi 2217283087 627 ANEArDSAqtsvTQAQR 643
Cdd:PRK11281 312 KNWL-DRL----TQSER 323
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
645-1309 |
2.04e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 56.61 E-value: 2.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 645 KAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKE------SLKVTKGSL 718
Cdd:PRK03918 171 IKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEElkeeieELEKELESL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 719 EEEKRRAADALEEQQRCISELKAETRSLVEQhkrerkeleeeragrkglEARLQQLgEAHQAETEVLRRELAEAMAAQHT 798
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELKKEIEELEEK------------------VKELKEL-KEKAEEYIKLSEFYEEYLDELRE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 799 AESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQEQLMTLK--EECEKARQELQEAKEKVAGIESHSELQISRQQNELAE 876
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKrlEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEK 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 877 lhanlaralqQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLV---RKAGEQQETASRELVkeparagdrqpewlE 953
Cdd:PRK03918 392 ----------ELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIeelKKAKGKCPVCGRELT--------------E 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 954 EQQGRQFCSTQAALQAMEREAEQMGNELERLRAALMESQGqqqeergqqerevARLTQERGRAQADLALE-KAARAELEM 1032
Cdd:PRK03918 448 EHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEK-------------VLKKESELIKLKELAEQlKELEEKLKK 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1033 RLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAA 1112
Cdd:PRK03918 515 YNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERL 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1113 GRTEPTGPKLEALRAEVSKLEQQCQKQqeqaDSLERSLEAERASRAERDSALETLQGQLEEKAQELghsqsalasaqrel 1192
Cdd:PRK03918 595 KELEPFYNEYLELKDAEKELEREEKEL----KKLEEELDKAFEELAETEKRLEELRKELEELEKKY-------------- 656
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1193 aafrtkvqdhskAEDEWKaqvaRGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRlvmaESEKSQKLEERLRLL 1272
Cdd:PRK03918 657 ------------SEEEYE----ELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE----ELEEREKAKKELEKL 716
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 2217283087 1273 QaetasnsaRAAERSSALREEVQSLREEAEK------QRVASE 1309
Cdd:PRK03918 717 E--------KALERVEELREKVKKYKALLKEralskvGEIASE 751
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
218-789 |
2.32e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 56.39 E-value: 2.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 218 RLKKQLADERSNRDELELELAENRKLLTEkDAQIAMMQQRIDRLALLnekQAASPLEPKELEELRDKNESLTmRLHETLK 297
Cdd:pfam12128 307 NGELSAADAAVAKDRSELEALEDQHGAFL-DADIETAAADQEQLPSW---QSELENLEERLKALTGKHQDVT-AKYNRRR 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 298 QC--QDLKTEKSQMDRKINQLSEENGDLsfkLREFASHLQQLQdalNELTEEHSKATQEWLEKQAQLEKELSAA------ 369
Cdd:pfam12128 382 SKikEQNNRDIAGIKDKLAKIREARDRQ---LAVAEDDLQALE---SELREQLEAGKLEFNEEEYRLKSRLGELklrlnq 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 370 -------LQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGdvlQLETLKQEAATLAANNTQLQARVEMLETE 442
Cdd:pfam12128 456 atatpelLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQ---ASEALRQASRRLEERQSALDELELQLFPQ 532
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 443 RGQQEAKLLAERGHFEEEKQQLSS----LITDLQSSISNLSQAKE--------ELEQ----ASQAHGARLTAQVASLTSE 506
Cdd:pfam12128 533 AGTLLHFLRKEAPDWEQSIGKVISpellHRTDLDPEVWDGSVGGElnlygvklDLKRidvpEWAASEEELRERLDKAEEA 612
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 507 LTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQL- 585
Cdd:pfam12128 613 LQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLk 692
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 586 -------ATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDsAQTSVTQAQREK------------A 646
Cdd:pfam12128 693 qldkkhqAWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAK-AELKALETWYKRdlaslgvdpdviA 771
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 647 ELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQK-ATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRA 725
Cdd:pfam12128 772 KLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRlATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKAS 851
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217283087 726 ADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKglEARLQQLGEAHQAETEVLRREL 789
Cdd:pfam12128 852 EKQQVRLSENLRGLRCEMSKLATLKEDANSEQAQGSIGER--LAQLEDLKLKRDYLSESVKKYV 913
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
314-983 |
2.50e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 56.50 E-value: 2.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 314 NQLSEENgdlsFKLREFASHLQQLQDALNELTEEHSKATqEWLEK---QAQLEKELSAALQDKKCLEEKNEILQGKLSQL 390
Cdd:COG3096 299 RQLAEEQ----YRLVEMARELEELSARESDLEQDYQAAS-DHLNLvqtALRQQEKIERYQEDLEELTERLEEQEEVVEEA 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 391 EEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQ-QEAKLLAER-----GHFEEEKQQL 464
Cdd:COG3096 374 AEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARALcGLPDLTPENaedylAAFRAKEQQA 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 465 SSLITDLQSSISNLSQAKEELEQASQA----HGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEkqaqlaqtLQ 540
Cdd:COG3096 454 TEEVLELEQKLSVADAARRQFEKAYELvckiAGEVERSQAWQTARELLRRYRSQQALAQRLQQLRAQLAE--------LE 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 541 QQEQASQGLRHQVEQLSSSLKQK---EQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEK------ 611
Cdd:COG3096 526 QRLRQQQNAERLLEEFCQRIGQQldaAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAArapawl 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 612 EKAAKLEILQQQLqvaNEARDSAQtSVTQAQREKAELSRKVEelqacvetarQEQHEAQAQVAELELQLRSEQQKA-TEK 690
Cdd:COG3096 606 AAQDALERLREQS---GEALADSQ-EVTAAMQQLLEREREAT----------VERDELAARKQALESQIERLSQPGgAED 671
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 691 ERVAQEKDQL---------------------------------------QEQLQALK---ESLKVTKG----------SL 718
Cdd:COG3096 672 PRLLALAERLggvllseiyddvtledapyfsalygparhaivvpdlsavKEQLAGLEdcpEDLYLIEGdpdsfddsvfDA 751
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 719 EEEKRRAADALEEQQ------------------RCISELKAETRSLVEQHKRERKELEEERAGRKGLEARL-QQLGEAHQ 779
Cdd:COG3096 752 EELEDAVVVKLSDRQwrysrfpevplfgraareKRLEELRAERDELAEQYAKASFDVQKLQRLHQAFSQFVgGHLAVAFA 831
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 780 AETEVlrrELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMfQEQLMTLKEE-----CEKARQELQEAKE 854
Cdd:COG3096 832 PDPEA---ELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKL-LPQANLLADEtladrLEELREELDAAQE 907
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 855 KVAGIESHselqiSRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETAS 934
Cdd:COG3096 908 AQAFIQQH-----GKALAQLEPLVAVLQSDPEQFEQLQADYLQAKEQQRRLKQQIFALSEVVQRRPHFSYEDAVGLLGEN 982
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 935 RELV-------KEPARAGDRQPEWLEEQQGR--QFCSTQAALQAMEREAEQMGNELER 983
Cdd:COG3096 983 SDLNeklrarlEQAEEARREAREQLRQAQAQysQYNQVLASLKSSRDAKQQTLQELEQ 1040
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
443-1267 |
2.65e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 56.11 E-value: 2.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 443 RGQQEAKLLAERGHFEEEKQQLSS--LITDLQSSISNLSQAKEELEQASQA---------HGARLTAQVASLTSELTTLN 511
Cdd:COG3096 281 RELSERALELRRELFGARRQLAEEqyRLVEMARELEELSARESDLEQDYQAasdhlnlvqTALRQQEKIERYQEDLEELT 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 512 ATIQQQDQELAGlkqqAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKqkEQQLKEVAEKQEATRQDHAQQLATAAEE 591
Cdd:COG3096 361 ERLEEQEEVVEE----AAEQLAEAEARLEAAEEEVDSLKSQLADYQQALD--VQQTRAIQYQQAVQALEKARALCGLPDL 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 592 REASLRERDAALKqleALEKEKAAKLEILQQQLQVANEARD------------SAQTSVTQAQREKAELSRKVEELQACV 659
Cdd:COG3096 435 TPENAEDYLAAFR---AKEQQATEEVLELEQKLSVADAARRqfekayelvckiAGEVERSQAWQTARELLRRYRSQQALA 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 660 ETARQeqheAQAQVAELElQLRSEQQKAtekERVAQEKDQLQEQLQALKESLKVTKGSLEEEKrraaDALEEQQRCISEL 739
Cdd:COG3096 512 QRLQQ----LRAQLAELE-QRLRQQQNA---ERLLEEFCQRIGQQLDAAEELEELLAELEAQL----EELEEQAAEAVEQ 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 740 KAETRSLVEQHKRERKELEEERAGRKGLEARLQQLGEaHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYED 819
Cdd:COG3096 580 RSELRQQLEQLRARIKELAARAPAWLAAQDALERLRE-QSGEALADSQEVTAAMQQLLEREREATVERDELAARKQALES 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 820 SQQEEAQYGAMFQEQLMTLKEE------CE------------------KARQ-----ELQEAKEKVAGIESHSE--LQIS 868
Cdd:COG3096 659 QIERLSQPGGAEDPRLLALAERlggvllSEiyddvtledapyfsalygPARHaivvpDLSAVKEQLAGLEDCPEdlYLIE 738
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 869 RQQNELAElhanlarALQQVQEKEVRaqkladDLSTLQEKMAATSK--EVARLEtlvRKAGEQQ-ETASRE---LVKEPA 942
Cdd:COG3096 739 GDPDSFDD-------SVFDAEELEDA------VVVKLSDRQWRYSRfpEVPLFG---RAAREKRlEELRAErdeLAEQYA 802
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 943 -RAGDRQPEWLEEQQGRQFCSTQAALqAMEREAEQmgnELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLA 1021
Cdd:COG3096 803 kASFDVQKLQRLHQAFSQFVGGHLAV-AFAPDPEA---ELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNK 878
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1022 LEKAARAELEMRLQNALNEQRVEFATLQEALAH------ALTEKEGKdqeLAKLRgleaAQIKELEELRQTVKQLKEQLa 1095
Cdd:COG3096 879 LLPQANLLADETLADRLEELREELDAAQEAQAFiqqhgkALAQLEPL---VAVLQ----SDPEQFEQLQADYLQAKEQQ- 950
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1096 kkeKEHASGSGAQSEAAGRTEPTG-PKLEALRAEVSKLEqqcqkqqeqaDSLERSLEAERASRAERDSALETLQGQLEEK 1174
Cdd:COG3096 951 ---RRLKQQIFALSEVVQRRPHFSyEDAVGLLGENSDLN----------EKLRARLEQAEEARREAREQLRQAQAQYSQY 1017
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1175 AQELGHSQSALASAQRELAAFRTKVQDHSKAEDEwkAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRL 1254
Cdd:COG3096 1018 NQVLASLKSSRDAKQQTLQELEQELEELGVQADA--EAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKR 1095
|
890
....*....|...
gi 2217283087 1255 VMAESEKSQKLEE 1267
Cdd:COG3096 1096 LRKAERDYKQERE 1108
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
582-812 |
2.67e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.16 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 582 AQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVET 661
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 662 ARQEQHEAQAQVAEL-----------ELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALE 730
Cdd:COG4942 95 LRAELEAQKEELAELlralyrlgrqpPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 731 EQQRCISELKAETRSLveqhkrerkelEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEV 810
Cdd:COG4942 175 ELEALLAELEEERAAL-----------EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
..
gi 2217283087 811 AA 812
Cdd:COG4942 244 PA 245
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
578-1429 |
2.74e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 56.11 E-value: 2.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 578 RQDHAQQLATAAEEREASLRERDAALKQLEALEKE---KAAKLEILQQQLQVANEARDSAQTSVtqAQREKAElsRKVEE 654
Cdd:COG3096 280 RRELSERALELRRELFGARRQLAEEQYRLVEMAREleeLSARESDLEQDYQAASDHLNLVQTAL--RQQEKIE--RYQED 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 655 LQACVETARqEQHEAQAQVAElELQLRSEQQKATEKErVAQEKDQLQEQLQALkeslkvtkgslEEEKRRA------ADA 728
Cdd:COG3096 356 LEELTERLE-EQEEVVEEAAE-QLAEAEARLEAAEEE-VDSLKSQLADYQQAL-----------DVQQTRAiqyqqaVQA 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 729 LEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQqlgeahqaetevlrreLAEAMAAQHtaeSECEQLVK 808
Cdd:COG3096 422 LEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLS----------------VADAARRQF---EKAYELVC 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 809 EVAAWRERYEDSQQeeaqygamfqeqlmtlkeecekARQELQEAKEKVAGIESHSelQISRQQNELAELHANLARALQQV 888
Cdd:COG3096 483 KIAGEVERSQAWQT----------------------ARELLRRYRSQQALAQRLQ--QLRAQLAELEQRLRQQQNAERLL 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 889 QEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARA---GDRQPEW---------LEEQQ 956
Cdd:COG3096 539 EEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIkelAARAPAWlaaqdalerLREQS 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 957 GRQFCSTQAALQAM------EREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERG-----RAQADLALEKA 1025
Cdd:COG3096 619 GEALADSQEVTAAMqqllerEREATVERDELAARKQALESQIERLSQPGGAEDPRLLALAERLGgvllsEIYDDVTLEDA 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1026 AraELEMRLQNA--------LNEQRVEFATLQEAL--------------AHALTEKEGKDQELAKLRGLE---------- 1073
Cdd:COG3096 699 P--YFSALYGPArhaivvpdLSAVKEQLAGLEDCPedlyliegdpdsfdDSVFDAEELEDAVVVKLSDRQwrysrfpevp 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1074 ----AAQIKELEELRQTVKQLKEQLA-------KKEKEHASGS---GAQSEAAGRTEPTgPKLEALRAEVSKLeqqcqkq 1139
Cdd:COG3096 777 lfgrAAREKRLEELRAERDELAEQYAkasfdvqKLQRLHQAFSqfvGGHLAVAFAPDPE-AELAALRQRRSEL------- 848
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1140 qeqadslERSLEAERASRAERDSALETLQGQLEEKAQELGHsqsALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQE 1219
Cdd:COG3096 849 -------ERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQ---ANLLADETLADRLEELREELDAAQEAQAFIQQHGKA 918
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1220 AERknslissLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETA---SNSARAAERSSALREEVQS 1296
Cdd:COG3096 919 LAQ-------LEPLVAVLQSDPEQFEQLQADYLQAKEQQRRLKQQIFALSEVVQRRPHfsyEDAVGLLGENSDLNEKLRA 991
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1297 LREEAEKQRvasenlrqeltsqaeraEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPA-KHLCQQLQAEQA 1375
Cdd:COG3096 992 RLEQAEEAR-----------------REAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQElEELGVQADAEAE 1054
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 1376 AAEKRHREELEQSKQAAGGLRAELLRA-QRELGELIPLRQKVAEQERTAQQLRAE 1429
Cdd:COG3096 1055 ERARIRRDELHEELSQNRSRRSQLEKQlTRCEAEMDSLQKRLRKAERDYKQEREQ 1109
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1276-1673 |
3.80e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 55.73 E-value: 3.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1276 TASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFfQKEQALSTLQLEHTSTQA 1355
Cdd:PRK04863 277 HANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIERYQA 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1356 LVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGELiplrQKVAEQERTAQQL--RAEKASY 1433
Cdd:PRK04863 356 DLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQ----QTRAIQYQQAVQAleRAKQLCG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1434 AEQLSmLKKAHGLLAE---ENRGLGERANLGRQFLEVElDQAREKYVQELAAVRADAetrlAEVQR-EAQSTAREL--EV 1507
Cdd:PRK04863 432 LPDLT-ADNAEDWLEEfqaKEQEATEELLSLEQKLSVA-QAAHSQFEQAYQLVRKIA----GEVSRsEAWDVARELlrRL 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1508 MTAKYEGAKVKVLEERQRFQEERQKLTAQVEELSkkladsDQASKVQQQKLKAVQaqggESQQEAQRLQAQLNELQAQLS 1587
Cdd:PRK04863 506 REQRHLAEQLQQLRMRLSELEQRLRQQQRAERLL------AEFCKRLGKNLDDED----ELEQLQEELEARLESLSESVS 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1588 QKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVR 1667
Cdd:PRK04863 576 EARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQ 655
|
....*.
gi 2217283087 1668 SLEAQV 1673
Cdd:PRK04863 656 ALDEEI 661
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
687-917 |
3.82e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.77 E-value: 3.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 687 ATEKERVAQEKDQLQEQLQALKESLKvtkgSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKG 766
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELA----ALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 767 LEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKeVAAWRERYEDSQQEEAQYGAMFQEQLMTLKEECEKAR 846
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVR-RLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 847 QELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVA 917
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
347-1096 |
4.73e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 55.36 E-value: 4.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 347 EHSKATQEWLEKQAQLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKgevlgdvlqlETLKQEAATLA 426
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERK----------QVLEKELKHLR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 427 ANNTQLQARVEMLetergQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQ-AHGARLTAQVASLTS 505
Cdd:TIGR00618 233 EALQQTQQSHAYL-----TQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKaAPLAAHIKAVTQIEQ 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 506 ELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQglRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQl 585
Cdd:TIGR00618 308 QAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQT--LHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTL- 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 586 ataaEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQE 665
Cdd:TIGR00618 385 ----QQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIH 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 666 QHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLeEEKRRAADALEEQQRCISELKAETRS 745
Cdd:TIGR00618 461 LQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHP-NPARQDIDNPGPLTRRMQRGEQTYAQ 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 746 LVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEA 825
Cdd:TIGR00618 540 LETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLR 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 826 QygamFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTL 905
Cdd:TIGR00618 620 K----LQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYW 695
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 906 QEKMAATSKEVARLETLV---RKAGEQQETASRELVKEPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELE 982
Cdd:TIGR00618 696 KEMLAQCQTLLRELETHIeeyDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQ 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 983 RLraalmesqgqqqeerGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGK 1062
Cdd:TIGR00618 776 TG---------------AELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEK 840
|
730 740 750
....*....|....*....|....*....|....
gi 2217283087 1063 DQELAKLRgleaAQIKELEELRQTVKQLKEQLAK 1096
Cdd:TIGR00618 841 SATLGEIT----HQLLKYEECSKQLAQLTQEQAK 870
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
209-625 |
5.05e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 5.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 209 LQTPQFQMRRLKKQLADERSNrdELELELAENRKLLTEKDAQIAMMQQRIDRLallneKQAASPLEpKELEELRDKNESL 288
Cdd:TIGR04523 290 LNQLKSEISDLNNQKEQDWNK--ELKSELKNQEKKLEEIQNQISQNNKIISQL-----NEQISQLK-KELTNSESENSEK 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 289 TMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEH---SKATQEWLEKQAQLEKE 365
Cdd:TIGR04523 362 QRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKellEKEIERLKETIIKNNSE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 366 LSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQ 445
Cdd:TIGR04523 442 IKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISS 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 446 qeakllaerghFEEEKQQLSSLITDLQSSISNLSQAKEELEQasqahgarltaqvaSLTSELttLNATIQQQDQELAGLK 525
Cdd:TIGR04523 522 -----------LKEKIEKLESEKKEKESKISDLEDELNKDDF--------------ELKKEN--LEKEIDEKNKEIEELK 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 526 QQAKekqaqlaqtlqqqeqasqglrhqveqlssSLKQKEQQLKEVAEKQEATRQDHAQQLA---TAAEEREASLRERDAA 602
Cdd:TIGR04523 575 QTQK-----------------------------SLKKKQEEKQELIDQKEKEKKDLIKEIEekeKKISSLEKELEKAKKE 625
|
410 420
....*....|....*....|...
gi 2217283087 603 LKQLEALEKEKAAKLEILQQQLQ 625
Cdd:TIGR04523 626 NEKLSSIIKNIKSKKNKLKQEVK 648
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
598-1427 |
5.74e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 54.96 E-value: 5.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 598 ERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELE 677
Cdd:PRK04863 280 ERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYQADLEE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 678 LQLRSEQQKATEKErVAQEKDQLQEQLQALKESLKVTKGSLEEEKRraadALEEQQrciselkaeTRSLVEQHKRERKEL 757
Cdd:PRK04863 360 LEERLEEQNEVVEE-ADEQQEENEARAEAAEEEVDELKSQLADYQQ----ALDVQQ---------TRAIQYQQAVQALER 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 758 EEERAGR-----KGLEARLQQLGEAHQAETEVL-----RRELAEAMAAQHTaesECEQLVKEVAAWRERyedsqqEEAQY 827
Cdd:PRK04863 426 AKQLCGLpdltaDNAEDWLEEFQAKEQEATEELlsleqKLSVAQAAHSQFE---QAYQLVRKIAGEVSR------SEAWD 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 828 GAmfqeqlmtlKEECEKARQELQEAkEKVAGIES-HSEL-QISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTL 905
Cdd:PRK04863 497 VA---------RELLRRLREQRHLA-EQLQQLRMrLSELeQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEAR 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 906 QEKMAATSKEVARLETLVRKAGEQQETASRELVKeparagdRQPEW---------LEEQQGRQFCSTQAALQAM------ 970
Cdd:PRK04863 567 LESLSESVSEARERRMALRQQLEQLQARIQRLAA-------RAPAWlaaqdalarLREQSGEEFEDSQDVTEYMqqller 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 971 EREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERG-----RAQADLALEKAAraELEMRLQNA-------- 1037
Cdd:PRK04863 640 ERELTVERDELAARKQALDEEIERLSQPGGSEDPRLNALAERFGgvllsEIYDDVSLEDAP--YFSALYGPArhaivvpd 717
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1038 LNEQRVEFATLQ-----------------------EALAHALTEKEGKDQ-ELAKLRGL----EAAQIKELEELRQTVKQ 1089
Cdd:PRK04863 718 LSDAAEQLAGLEdcpedlyliegdpdsfddsvfsvEELEKAVVVKIADRQwRYSRFPEVplfgRAAREKRIEQLRAEREE 797
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1090 LKEQLAKKEKEHAsgsgaqseaagrteptgpKLEALRAEVSKLEQQCQKQQEQADSlERSLEAERASRAERDSALETLQG 1169
Cdd:PRK04863 798 LAERYATLSFDVQ------------------KLQRLHQAFSRFIGSHLAVAFEADP-EAELRQLNRRRVELERALADHES 858
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1170 QLEEKAQELGHSQSALASAQRELAAFRT-KVQDHSKAEDEWKAQVARGrQEAER----KNSLISSLEEEVSILNrqvlEK 1244
Cdd:PRK04863 859 QEQQQRSQLEQAKEGLSALNRLLPRLNLlADETLADRVEEIREQLDEA-EEAKRfvqqHGNALAQLEPIVSVLQ----SD 933
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1245 EGESKELKRLVMAESEKSQKLEERLRLLqaetASNSARAAERSSAlrEEVQSLREEAEkqrvASENLRQELTSQAERAEE 1324
Cdd:PRK04863 934 PEQFEQLKQDYQQAQQTQRDAKQQAFAL----TEVVQRRAHFSYE--DAAEMLAKNSD----LNEKLRQRLEQAEQERTR 1003
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1325 LGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPA-KHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQ 1403
Cdd:PRK04863 1004 AREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQElQDLGVPADSGAEERARARRDELHARLSANRSRRNQLEKQL 1083
|
890 900
....*....|....*....|....*
gi 2217283087 1404 -RELGELIPLRQKVAEQERTAQQLR 1427
Cdd:PRK04863 1084 tFCEAEMDNLTKKLRKLERDYHEMR 1108
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1380-1672 |
6.20e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.96 E-value: 6.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1380 RHREELEQSKQAAGGLRAELLRAQRELGE----LIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLL-------- 1447
Cdd:COG3096 275 RHANERRELSERALELRRELFGARRQLAEeqyrLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQekieryqe 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1448 --------AEENRGLGERANLGRQFLEVELDQAREKyVQELAAVRADAETRLAEVQ------REAQSTARELEVMTAKYE 1513
Cdd:COG3096 355 dleelterLEEQEEVVEEAAEQLAEAEARLEAAEEE-VDSLKSQLADYQQALDVQQtraiqyQQAVQALEKARALCGLPD 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1514 GAKVKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGE-----SQQEAQRLQAQLNELQAQLSQ 1588
Cdd:COG3096 434 LTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEversqAWQTARELLRRYRSQQALAQR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1589 KEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSL---EQLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQ 1665
Cdd:COG3096 514 LQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLdaaEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRAR 593
|
....*..
gi 2217283087 1666 VRSLEAQ 1672
Cdd:COG3096 594 IKELAAR 600
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
253-656 |
7.41e-07 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 54.84 E-value: 7.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 253 MMQQRIDRLALLNEKQAASPLEPKeLEELRDKNESLTMRLHETLKQCQDLK-TEKSQMDRKINQLSEENGDLSFKLREFA 331
Cdd:NF012221 1457 LTAGEVIALSFDFARRAGLSTNNG-IEVLWNGEVVFASSGDASAWQQKTLKlTAKAGSNRLEFKGTGHNDGLGYILDNVV 1535
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 332 --SHLQQLQDALNELTEEhSKATQEwlekqaqlekelsaALQDKKCLEEKNEILQGKLSQLEEHLSQLQ---DNPPQEKG 406
Cdd:NF012221 1536 atSESSQQADAVSKHAKQ-DDAAQN--------------ALADKERAEADRQRLEQEKQQQLAAISGSQsqlESTDQNAL 1600
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 407 EVLGDVlQLETLKQEAATLAANNTQLQARVEMLET------ERGQQeakllaERGHFEEekqqlsSLITDLQSSISNLSQ 480
Cdd:NF012221 1601 ETNGQA-QRDAILEESRAVTKELTTLAQGLDALDSqatyagESGDQ------WRNPFAG------GLLDRVQEQLDDAKK 1667
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 481 -AKEELEQASQAHGARLT-AQVASLTSELTTLNATIQQQDQELAGlkQQAKEKQAQLAQTLQQQEQASQglrhQVEQLSS 558
Cdd:NF012221 1668 iSGKQLADAKQRHVDNQQkVKDAVAKSEAGVAQGEQNQANAEQDI--DDAKADAEKRKDDALAKQNEAQ----QAESDAN 1741
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 559 SLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQL---EALEKEKAAK-LEILQQQLQVANEARDSA 634
Cdd:NF012221 1742 AAANDAQSRGEQDASAAENKANQAQADAKGAKQDESDKPNRQGAAGSGlsgKAYSVEGVAEpGSHINPDSPAAADGRFSE 1821
|
410 420
....*....|....*....|..
gi 2217283087 635 QTSvTQAQREKAELSRKVEELQ 656
Cdd:NF012221 1822 GLT-EQEQEALEGATNAVNRLQ 1842
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1408-1603 |
8.17e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 8.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1408 ELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEvELDQAREKYVQELAAVRADA 1487
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA-ELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1488 ETRLAEVQREAQSTAREL---------EVMTAKYEGAKVKVLEER-QRFQEERQKLTAQVEELSKKLADSDQASKVQQQK 1557
Cdd:COG4942 107 AELLRALYRLGRQPPLALllspedfldAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2217283087 1558 LKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKA 1603
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
263-881 |
8.61e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 54.67 E-value: 8.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 263 LLNEKQAASPLEPKELEELRDKNESLTMRLHetlKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREfashLQQLQDALN 342
Cdd:TIGR00606 413 LCADLQSKERLKQEQADEIRDEKKGLGRTIE---LKKEILEKKQEELKFVIKELQQLEGSSDRILEL----DQELRKAER 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 343 ELTEEHSKATQEWLEKQAQLEKELSAALQDKKC-LEEKNEILQGKLSQLEEHLS----------QLQDNPPQEKGEV--- 408
Cdd:TIGR00606 486 ELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRkLDQEMEQLNHHTTTRTQMEMltkdkmdkdeQIRKIKSRHSDELtsl 565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 409 LGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDL------QSSISNLSQAK 482
Cdd:TIGR00606 566 LGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfdvcgsQDEESDLERLK 645
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 483 EELEQASQ--AHGARLTAQVASLTSELTTLN--------------ATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQAS 546
Cdd:TIGR00606 646 EEIEKSSKqrAMLAGATAVYSQFITQLTDENqsccpvcqrvfqteAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRR 725
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 547 QGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDhAQQLATAAEEREASLRERDAALKQLEALEKEkAAKLEILQQQL-- 624
Cdd:TIGR00606 726 DEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRD-IQRLKNDIEEQETLLGTIMPEEESAKVCLTD-VTIMERFQMELkd 803
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 625 -------QVANEARDSAQTSVTQAQREKAE-------LSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEK 690
Cdd:TIGR00606 804 verkiaqQAAKLQGSDLDRTVQQVNQEKQEkqheldtVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRR 883
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 691 ERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEAR 770
Cdd:TIGR00606 884 QQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENK 963
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 771 LQQLGEAHQAETEvlrRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEaqygAMFQEQLMTLKEEcekarQELQ 850
Cdd:TIGR00606 964 IQDGKDDYLKQKE---TELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQE----RWLQDNLTLRKRE-----NELK 1031
|
650 660 670
....*....|....*....|....*....|..
gi 2217283087 851 EAKEKVAGIESH-SELQISRQQNELAELHANL 881
Cdd:TIGR00606 1032 EVEEELKQHLKEmGQMQVLQMKQEHQKLEENI 1063
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
211-670 |
1.58e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 53.43 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 211 TPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQI-AMMQQRIDRLALLNEKQAASPLEPKELEELRDKNESLT 289
Cdd:TIGR00618 448 TCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKkAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLT 527
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 290 MRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQLEKELSAA 369
Cdd:TIGR00618 528 RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAE 607
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 370 LQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAK 449
Cdd:TIGR00618 608 DMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQS 687
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 450 LLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAK 529
Cdd:TIGR00618 688 EKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNN 767
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 530 EKQAQLAQTLQQQEQASQGLRHQVEQLSS---SLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAAL--- 603
Cdd:TIGR00618 768 EEVTAALQTGAELSHLAAEIQFFNRLREEdthLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLgei 847
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 604 -KQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQ 670
Cdd:TIGR00618 848 tHQLLKYEECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDALIKFLHEITLYANVRLANQSEGR 915
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
596-749 |
1.60e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.46 E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 596 LRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQ------HEA 669
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLgnvrnnKEY 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 670 QAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG1579 92 EALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAK 171
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
445-718 |
1.64e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 53.38 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 445 QQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQaHGARLTAQVASLTSELTTLNATIQQQD-QELAG 523
Cdd:PRK11281 42 QAQLDALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQ-QLAQAPAKLRQAQAELEALKDDNDEETrETLST 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 524 L------KQQAKEKQAQLAQTLQQQEQASQ--GLRHQVE----QLSSSLKQKEQ---QLKEVAEKQEATRQDHAQQLATA 588
Cdd:PRK11281 121 LslrqleSRLAQTLDQLQNAQNDLAEYNSQlvSLQTQPEraqaALYANSQRLQQirnLLKGGKVGGKALRPSQRVLLQAE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 589 AEEREASLRERDAALK---QLEALEK----EKAAKLEILQQQLQVAneardsaQTSVTQAQREKAElsRKVEELQACVET 661
Cdd:PRK11281 201 QALLNAQNDLQRKSLEgntQLQDLLQkqrdYLTARIQRLEHQLQLL-------QEAINSKRLTLSE--KTVQEAQSQDEA 271
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 662 ARQEQHEAQAQVAELELQLRSEQQKATEKE--------RVAQEKDQLQEQLQALKESLKVTKGSL 718
Cdd:PRK11281 272 ARIQANPLVAQELEINLQLSQRLLKATEKLntltqqnlRVKNWLDRLTQSERNIKEQISVLKGSL 336
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
458-687 |
1.71e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 458 EEEKQQLSSLITDLQSSISNLSQAKEELEQASQAhgarLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQ 537
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAA----LERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 538 TLQQQEqasqglrhqvEQLSSSLKQKEQQLKEVAEKQEATRQ--DHAQQLATAAEEREASLRERDAALKQLEALEKEKAA 615
Cdd:COG4942 102 QKEELA----------ELLRALYRLGRQPPLALLLSPEDFLDavRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 616 KLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKA 687
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
832-1042 |
2.01e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 832 QEQLMTLKEECEKARQELQEAKEKVAGIEShselQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAA 911
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLK----QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 912 TSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQpEWLE------EQQGRQFCSTQAALQAMEREAEQMGNELERLR 985
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRL-QYLKylaparREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 986 AALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQR 1042
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
645-1648 |
2.33e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.87 E-value: 2.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 645 KAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQE-KDQLQEQLQALKESLKVTKGSLEEEKR 723
Cdd:pfam01576 10 KEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEmRARLAARKQELEEILHELESRLEEEEE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 724 RAADALEEQQRCISELKAETRSLVEQHKRERK---ELEEERAGRKGLEARLQQLgEAHQAETEVLRRELAEAMAAQHTAE 800
Cdd:pfam01576 90 RSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKlqlEKVTTEAKIKKLEEDILLL-EDQNSKLSKERKLLEERISEFTSNL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 801 SECEQLVKEVAAWRERYEdsqqeeaqygAMFQEQLMTLKEEcEKARQELQEAKEKVAGIESHSELQISRQQNELAELHAN 880
Cdd:pfam01576 169 AEEEEKAKSLSKLKNKHE----------AMISDLEERLKKE-EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 881 LARALQQVQEKEVRAQK--------------LADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASREL--------- 937
Cdd:pfam01576 238 LAKKEEELQAALARLEEetaqknnalkkireLEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELedtldttaa 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 938 -----------VKEPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQmgneLERLRAALMESQGQQQEERGQQEREV 1006
Cdd:pfam01576 318 qqelrskreqeVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQ----AKRNKANLEKAKQALESENAELQAEL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1007 ARLTQ-----ERGRAQADLAL-EKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKEL 1080
Cdd:pfam01576 394 RTLQQakqdsEHKRKKLEGQLqELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDT 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1081 EELRQTVKQLKEQLAKK----EKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLE-------RS 1149
Cdd:pfam01576 474 QELLQEETRQKLNLSTRlrqlEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEegkkrlqRE 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1150 LEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISS 1229
Cdd:pfam01576 554 LEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEARE 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1230 LEEEVSILNRQVLEKEGESKELKRlvmaeSEKSQKLEERLRLLQAETASNSARAAERSS-ALREEVQSLR---EEAEKQR 1305
Cdd:pfam01576 634 KETRALSLARALEEALEAKEELER-----TNKQLRAEMEDLVSSKDDVGKNVHELERSKrALEQQVEEMKtqlEELEDEL 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1306 VASEN--LRQELTSQAERAE---ELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKR 1380
Cdd:pfam01576 709 QATEDakLRLEVNMQALKAQferDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDA 788
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1381 HREELEQSKQAAGGLRAELLRAQRELGELIPLRQKV----AEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGE 1456
Cdd:pfam01576 789 ANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEIlaqsKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELAD 868
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1457 RANLGRQFLEVELDQAREkyvqeLAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEER---QRFQEERQKL 1533
Cdd:pfam01576 869 EIASGASGKSALQDEKRR-----LEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERstsQKSESARQQL 943
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1534 TAQVEELSKKLADSDQASKVQQQ--------KLKAVQAQGGESQQEAQ-------RLQAQLNELQAQLSQKEQAAEHYKL 1598
Cdd:pfam01576 944 ERQNKELKAKLQEMEGTVKSKFKssiaaleaKIAQLEEQLEQESRERQaanklvrRTEKKLKEVLLQVEDERRHADQYKD 1023
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1599 QMEKAKTHYDAKKqqnqelqeqlRSLEQLQKENKELRAEAERLGHELQQA 1648
Cdd:pfam01576 1024 QAEKGNSRMKQLK----------RQLEEAEEEASRANAARRKLQRELDDA 1063
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1248-1649 |
2.53e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.03 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1248 SKELKRLVMAESEKSQKLE---ERLRLLQaetasNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEE 1324
Cdd:COG3096 312 ARELEELSARESDLEQDYQaasDHLNLVQ-----TALRQQEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEA 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1325 LGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAellraqr 1404
Cdd:COG3096 387 AEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLE------- 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1405 elgelipLRQKVAEQERTAQQlraekasYAEQLSMLKKAHGLLAEENRGLGERANLgRQFLEVELDQARekyVQELAAVR 1484
Cdd:COG3096 460 -------LEQKLSVADAARRQ-------FEKAYELVCKIAGEVERSQAWQTARELL-RRYRSQQALAQR---LQQLRAQL 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1485 ADAETRLAEvQREAQSTARELEVMTAKyegakvkVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQ 1564
Cdd:COG3096 522 AELEQRLRQ-QQNAERLLEEFCQRIGQ-------QLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRAR 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1565 GGESQQEAQR---LQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHydakkqqnqelqeqLRSLEQLQKENKELRAEAERL 1641
Cdd:COG3096 594 IKELAARAPAwlaAQDALERLREQSGEALADSQEVTAAMQQLLER--------------EREATVERDELAARKQALESQ 659
|
....*...
gi 2217283087 1642 GHELQQAG 1649
Cdd:COG3096 660 IERLSQPG 667
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1226-1674 |
2.70e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 2.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1226 LISSLEEEV-SILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQ--AETASNSARAAERSSALREEVQSLREEAE 1302
Cdd:COG4717 47 LLERLEKEAdELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEelEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1303 KQRVASE--NLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHlcqQLQAEQAAAEKR 1380
Cdd:COG4717 127 LLPLYQEleALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE---EELQDLAEELEE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1381 HREELEQSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTaQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANL 1460
Cdd:COG4717 204 LQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERL-KEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1461 GRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEER-QRFQEERQKLTAQVEE 1539
Cdd:COG4717 283 LGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRiEELQELLREAEELEEE 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1540 LSKKLADSDQASKVQQQKLKAVQA--QGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAkthydakkQQNQEL 1617
Cdd:COG4717 363 LQLEELEQEIAALLAEAGVEDEEElrAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE--------ELEEEL 434
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217283087 1618 QEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTK--EAEQTCRHLTAQVRSLEAQVA 1674
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEEDGElaELLQELEELKAELRELAEEWA 493
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
213-485 |
2.81e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 52.75 E-value: 2.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 213 QFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRL-ALLNEKQAASPLEPKELEELRDKNESLTMR 291
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALrEALDELRAELTLLNEEAANLRERLESLERR 832
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 292 LHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFAS---HLQQLQDALNELTEEHSKATQEWLEKQAQLEKELSA 368
Cdd:TIGR02168 833 IAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESeleALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 369 ALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPqEKGEVLgdvlqLETLKQEAATLAANNTQLQARVEMLETERGQQEA 448
Cdd:TIGR02168 913 LRRELEELREKLAQLELRLEGLEVRIDNLQERLS-EEYSLT-----LEEAEALENKIEDDEEEARRRLKRLENKIKELGP 986
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2217283087 449 KLLAERGHFEEEKQQ---LSSLITDLQSSISNLSQAKEEL 485
Cdd:TIGR02168 987 VNLAAIEEYEELKERydfLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
947-1596 |
2.88e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.66 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 947 RQPEWLEEQQGRQFCSTQAalQAMEREAEQMGNELERLRAALmeSQGQQQEERGQQEREVARLTQERGRAQADLALEKAA 1026
Cdd:TIGR00618 247 QKREAQEEQLKKQQLLKQL--RARIEELRAQEAVLEETQERI--NRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1027 RAELEMRLQNAL-NEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGS 1105
Cdd:TIGR00618 323 RAKLLMKRAAHVkQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKEL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1106 GAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQELGHSQSAL 1185
Cdd:TIGR00618 403 DILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIH 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1186 ASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRqVLEKEGESKELKRLVMAESEKSQKL 1265
Cdd:TIGR00618 483 LQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQT-YAQLETSEEDVYHQLTSERKQRASL 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1266 EERLRLLQAET---ASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAE-ELGQELKAWQEKFFQKEQ 1341
Cdd:TIGR00618 562 KEQMQEIQQSFsilTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQpEQDLQDVRLHLQQCSQEL 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1342 ALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGELiplRQKVAEQER 1421
Cdd:TIGR00618 642 ALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLREL---ETHIEEYDR 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1422 TAQQLRAEKASYAEQLSMLKKAHgllaeeNRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAEtrLAEVQREAQST 1501
Cdd:TIGR00618 719 EFNEIENASSSLGSDLAAREDAL------NQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAE--LSHLAAEIQFF 790
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1502 ARELEvmtAKYEGAKVKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQaQLNE 1581
Cdd:TIGR00618 791 NRLRE---EDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLA-QLTQ 866
|
650
....*....|....*
gi 2217283087 1582 LQAQLSQKEQAAEHY 1596
Cdd:TIGR00618 867 EQAKIIQLSDKLNGI 881
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
547-937 |
2.91e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 2.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 547 QGLRHQVEQLSSSLKQKEQQLKEVaeKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALE------KEKAAKLEIL 620
Cdd:COG4717 91 AELQEELEELEEELEELEAELEEL--REELEKLEKLLQLLPLYQELEALEAELAELPERLEELEerleelRELEEELEEL 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 621 QQQLQVANEARDSAQTSVTQAQREK-AELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKAtekeRVAQEKDQ 699
Cdd:COG4717 169 EAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL----EAAALEER 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 700 LQEQLQALK-----ESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQL 774
Cdd:COG4717 245 LKEARLLLLiaaalLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEEL 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 775 GEAHQAETEVLRRELAEAMAAQHTAesecEQLVKEVAAWRERYEDSQQEEAQYgAMFQEQLMTLKEECEKARQELQEAKE 854
Cdd:COG4717 325 LAALGLPPDLSPEELLELLDRIEEL----QELLREAEELEEELQLEELEQEIA-ALLAEAGVEDEEELRAALEQAEEYQE 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 855 KVAGIESHSElQISRQQNELAEL--HANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLET--LVRKAGEQQ 930
Cdd:COG4717 400 LKEELEELEE-QLEELLGELEELleALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEdgELAELLQEL 478
|
....*..
gi 2217283087 931 ETASREL 937
Cdd:COG4717 479 EELKAEL 485
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
467-706 |
4.10e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 4.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 467 LITDLQSSISNLSQAKEELEQAsQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQas 546
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQL-QQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 547 qgLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLReRDAALKQLEALEKEKAAKLEILQQQLQV 626
Cdd:COG4942 88 --LEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVR-RLQYLKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 627 ANEardsaqtsvtQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQA 706
Cdd:COG4942 165 LRA----------ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
218-713 |
4.42e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.04 E-value: 4.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 218 RLKKQLADERSNRDELELELAENRKLLtEKDAQIAMMQQRIDRlallnekqaasplepkeleELRDKNESLtMRLHETLK 297
Cdd:pfam15921 378 QLQKLLADLHKREKELSLEKEQNKRLW-DRDTGNSITIDHLRR-------------------ELDDRNMEV-QRLEALLK 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 298 QcqdLKTE-KSQMDRKINQLSEENGDLSfKLREFASHLQQLQDALNELTEEHSkATQEWLEKQAQLEKELSAALQDK-KC 375
Cdd:pfam15921 437 A---MKSEcQGQMERQMAAIQGKNESLE-KVSSLTAQLESTKEMLRKVVEELT-AKKMTLESSERTVSDLTASLQEKeRA 511
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 376 LEEKNEILQG-------KLSQL------EEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETE 442
Cdd:pfam15921 512 IEATNAEITKlrsrvdlKLQELqhlkneGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVE 591
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 443 RGQQEAKLLAERGHFEE---EKQQLSSLITDLQSSISNLSQAKEELEQAsqahGARLTAQVASLTSELTTLNATIQQQDQ 519
Cdd:pfam15921 592 KAQLEKEINDRRLELQEfkiLKDKKDAKIRELEARVSDLELEKVKLVNA----GSERLRAVKDIKQERDQLLNEVKTSRN 667
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 520 ELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKqeatrQDHAQQLATAAEEREASLRer 599
Cdd:pfam15921 668 ELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGS-----DGHAMKVAMGMQKQITAKR-- 740
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 600 daalKQLEALEkekaAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQ 679
Cdd:pfam15921 741 ----GQIDALQ----SKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVA 812
|
490 500 510
....*....|....*....|....*....|....
gi 2217283087 680 LRSEQQKATEKERVAQEKDQLQEQLQaLKESLKV 713
Cdd:pfam15921 813 LDKASLQFAECQDIIQRQEQESVRLK-LQHTLDV 845
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
592-1030 |
6.87e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 6.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 592 REASLRERDAALKQLEALEkEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVE--ELQACVETARQEQHEA 669
Cdd:COG4717 66 PELNLKELKELEEELKEAE-EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAEL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 670 QAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTK----GSLEEEKRRAADALEEQQRCISELKAETRS 745
Cdd:COG4717 145 PERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATeeelQDLAEELEELQQRLAELEEELEEAQEELEE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 746 LVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEA 825
Cdd:COG4717 225 LEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 826 qygamfqEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQqvQEKEVRAQKLADDLSTL 905
Cdd:COG4717 305 -------EELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE--LEEELQLEELEQEIAAL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 906 QEKMAATSKEvaRLETLVRKAGEQQETASRELVKEpARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLR 985
Cdd:COG4717 376 LAEAGVEDEE--ELRAALEQAEEYQELKEELEELE-EQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELR 452
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2217283087 986 AALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAEL 1030
Cdd:COG4717 453 EELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1078-1308 |
7.35e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 7.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1078 KELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASR 1157
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1158 AERDSALETLQGQleEKAQELGHSQSALASAQRelaafrtkVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSIL 1237
Cdd:COG4942 107 AELLRALYRLGRQ--PPLALLLSPEDFLDAVRR--------LQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 1238 NRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAErssaLREEVQSLREEAEKQRVAS 1308
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE----LEALIARLEAEAAAAAERT 243
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
213-734 |
7.76e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 7.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 213 QFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRI-----DRLALLNEKQAASPLEPKELEELRDKNES 287
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIrgnggDRLEQLEREIERLERELEERERRRARLEA 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 288 LTMRLHETLKqcqdlkTEKSQMDRKINQLSEEngdlsfkLREFASHLQQLQDALNELTEEHSKATQEwlekQAQLEKELS 367
Cdd:COG4913 367 LLAALGLPLP------ASAEEFAALRAEAAAL-------LEALEEELEALEEALAEAEAALRDLRRE----LRELEAEIA 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 368 AALQDKKCLEEKNEILqgkLSQLEEHLSQLQDNPPqekgeVLGDVLQLETL-----------------------KQEAAT 424
Cdd:COG4913 430 SLERRKSNIPARLLAL---RDALAEALGLDEAELP-----FVGELIEVRPEeerwrgaiervlggfaltllvppEHYAAA 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 425 LAA-NNTQLQARVEMLETERGQQEAKLLAerghFEEekqqlSSLITDLQSSISNLSQ-AKEELEQASQAHGARLTAQVA- 501
Cdd:COG4913 502 LRWvNRLHLRGRLVYERVRTGLPDPERPR----LDP-----DSLAGKLDFKPHPFRAwLEAELGRRFDYVCVDSPEELRr 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 502 ---SLTSE-LTTLNATIQQQDQELAG-----LKQQAKEKQAQLAQTLQQqeqasqgLRHQVEQLSSSLKQKEQQLKEVAE 572
Cdd:COG4913 573 hprAITRAgQVKGNGTRHEKDDRRRIrsryvLGFDNRAKLAALEAELAE-------LEEELAEAEERLEALEAELDALQE 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 573 KQEATRQdhAQQLATAAEEREASLRERDAALKQLEALEKEKaAKLEILQQQLQVANEARDsaqtsvtQAQREKAELSRKV 652
Cdd:COG4913 646 RREALQR--LAEYSWDEIDVASAEREIAELEAELERLDASS-DDLAALEEQLEELEAELE-------ELEEELDELKGEI 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 653 EELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQA-LKESLKvtkgSLEEEKRRAADALEE 731
Cdd:COG4913 716 GRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELREnLEERID----ALRARLNRAEEELER 791
|
...
gi 2217283087 732 QQR 734
Cdd:COG4913 792 AMR 794
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1074-1687 |
7.87e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 7.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1074 AAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQS--EAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSlE 1151
Cdd:TIGR00618 222 QVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKkqQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHI-K 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1152 AERASRAERDSALETLQGQLEEKAQELGHSQSALASaqrelaafRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLE 1231
Cdd:TIGR00618 301 AVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQ--------QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISC 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1232 EEVSILNRQvlekegesKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERS------SALREEVQSLREEAEKQR 1305
Cdd:TIGR00618 373 QQHTLTQHI--------HTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRdlqgqlAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1306 VASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALV------------SELLPAKHLCQQLQ-- 1371
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLlelqeepcplcgSCIHPNPARQDIDNpg 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1372 ------AEQAAAEKRHREELEQSKQAAGGLRAELLR----AQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLK 1441
Cdd:TIGR00618 525 pltrrmQRGEQTYAQLETSEEDVYHQLTSERKQRASlkeqMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLS 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1442 KAHGLLAEENRGLGERAN--LGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKV 1519
Cdd:TIGR00618 605 EAEDMLACEQHALLRKLQpeQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQK 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1520 LEERQRF-----------QEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQ----AQLNELQA 1584
Cdd:TIGR00618 685 MQSEKEQltywkemlaqcQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQArtvlKARTEAHF 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1585 QLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLE-QLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLT 1663
Cdd:TIGR00618 765 NNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEaEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATL 844
|
650 660
....*....|....*....|....
gi 2217283087 1664 AQVRSLEAQVAHADQQLRDLGKFQ 1687
Cdd:TIGR00618 845 GEITHQLLKYEECSKQLAQLTQEQ 868
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
422-642 |
1.10e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.79 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 422 AATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEE--EKQQLSSLITDLQSSISNLSQAKEELEQAsQAHGARLTAQ 499
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQLSELESQLAEA-RAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 500 VASLTSELTTLNATIQQ--QDQELAGLKQQAKEKQAQLAQTLQQQEQAS---QGLRHQVEQLSSSLKQKEQQLKEVAEKQ 574
Cdd:COG3206 242 LAALRAQLGSGPDALPEllQSPVIQQLRAQLAELEAELAELSARYTPNHpdvIALRAQIAALRAQLQQEAQRILASLEAE 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 575 EATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQ 642
Cdd:COG3206 322 LEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
210-780 |
1.12e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.94 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 210 QTPQFQMRRLKKQLADERSNRDELELELAENR--KLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEELRDKNES 287
Cdd:pfam01576 3 QEEEMQAKEEELQKVKERQQKAESELKELEKKhqQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 288 ltmRLHETLKQCQDLKTEKSQMDRKI----NQLSEENG---DLSFKLREFASHLQQLQDALNELTEEHSKATQEwlekQA 360
Cdd:pfam01576 83 ---RLEEEEERSQQLQNEKKKMQQHIqdleEQLDEEEAarqKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKE----RK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 361 QLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLE 440
Cdd:pfam01576 156 LLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 441 TERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHgARLTAQVASLTSELTTLNATIQQQDQE 520
Cdd:pfam01576 236 AQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAAR-NKAEKQRRDLGEELEALKTELEDTLDT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 521 LAglkqqakekqaqlaqtlqqqeqASQGLRHQVEQLSSSLKQKEQQLKEVAEKQ-EATRQDHAQQLATAAEEREASLRER 599
Cdd:pfam01576 315 TA----------------------AQQELRSKREQEVTELKKALEEETRSHEAQlQEMRQKHTQALEELTEQLEQAKRNK 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 600 DAALKQLEALEKEKA---AKLEILQQQLQVANEARDSA-------QTSVTQAQREKAELSRKVEELQACVETARQEQHEA 669
Cdd:pfam01576 373 ANLEKAKQALESENAelqAELRTLQQAKQDSEHKRKKLegqlqelQARLSESERQRAELAEKLSKLQSELESVSSLLNEA 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 670 QAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:pfam01576 453 EGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKK 532
|
570 580 590
....*....|....*....|....*....|....*
gi 2217283087 750 HKRERKELEEERAGRK----GLEARLQQLGEAHQA 780
Cdd:pfam01576 533 LEEDAGTLEALEEGKKrlqrELEALTQQLEEKAAA 567
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1022-1697 |
1.13e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.74 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1022 LEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEG----KDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKK 1097
Cdd:pfam02463 159 EEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQelklKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEER 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1098 EKEhasgsgaqseaagrtepTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQE 1177
Cdd:pfam02463 239 IDL-----------------LQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSE 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1178 LGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMA 1257
Cdd:pfam02463 302 LLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1258 ESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFF 1337
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1338 QKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELE----QSKQAAGGLRAELLRAQRELGELIPLR 1413
Cdd:pfam02463 462 KDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKvllaLIKDGVGGRIISAHGRLGDLGVAVENY 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1414 QKVAEQERTAQQLRAEKASYAEQ-----LSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRADAE 1488
Cdd:pfam02463 542 KVAISTAVIVEVSATADEVEERQklvraLTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKR 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1489 TRLAEVQREaqSTARELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGES 1568
Cdd:pfam02463 622 AKVVEGILK--DTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQL 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1569 QQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDA--KKQQNQELQEQLRSLEQLQKENKELRAEAERLGHELQ 1646
Cdd:pfam02463 700 EIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLlkQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEE 779
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 1647 QAGLKTKEAEQTCRH-LTAQVRSLEAQVAHADQQLRDLGKFQVATDALKSRE 1697
Cdd:pfam02463 780 REKTEKLKVEEEKEEkLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIK 831
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
276-507 |
1.14e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 276 KELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEengdlsfKLREFASHLQQLQDALNELTEEHSKATQEW 355
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALAR-------RIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 356 LEKQAQLEKELSAALQdkkcleekneilQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQleTLKQEAATLAANNTQLQAR 435
Cdd:COG4942 100 EAQKEELAELLRALYR------------LGRQPPLALLLSPEDFLDAVRRLQYLKYLAP--ARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 436 VEMLETERGQQE---AKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQahgaRLTAQVASLTSEL 507
Cdd:COG4942 166 RAELEAERAELEallAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE----ELEALIARLEAEA 236
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
208-784 |
1.33e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.74 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 208 ILQTPQFQMRRLKKQLAdERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEELRDKNES 287
Cdd:TIGR00618 312 IHTELQSKMRSRAKLLM-KRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTT 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 288 LTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQE--WLEKQAQLEKE 365
Cdd:TIGR00618 391 LTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEkiHLQESAQSLKE 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 366 LSAALQDKKCLEEKNEilqgKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQ 445
Cdd:TIGR00618 471 REQQLQTKEQIHLQET----RKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEED 546
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 446 QEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQahgarltaqvasLTSELTTLNATIQQQDQELAGLK 525
Cdd:TIGR00618 547 VYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQN------------ITVRLQDLTEKLSEAEDMLACEQ 614
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 526 QQAKEKQAQLAQTLQQQEQASQglrhqveqlssslKQKEQQLKEVAEKQEA---TRQDHAQQLATAAEEREASLRERDAA 602
Cdd:TIGR00618 615 HALLRKLQPEQDLQDVRLHLQQ-------------CSQELALKLTALHALQltlTQERVREHALSIRVLPKELLASRQLA 681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 603 LKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQV--------- 673
Cdd:TIGR00618 682 LQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQArtvlkarte 761
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 674 --AELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHK 751
Cdd:TIGR00618 762 ahFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKS 841
|
570 580 590
....*....|....*....|....*....|...
gi 2217283087 752 RERKELEEERagrKGLEARLQQLGEAHQAETEV 784
Cdd:TIGR00618 842 ATLGEITHQL---LKYEECSKQLAQLTQEQAKI 871
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
304-931 |
1.60e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 1.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 304 TEKSQMDRKINQLSEE-------NGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQLEKELSAALQDKKCL 376
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNElknkekeLKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 377 EEKNEILQGKLSQLEEHLSQLQDNPPQEKgEVLGDVLQLEtlkQEAATLAANNTQLQARVEMLETERGQqeakllaergh 456
Cdd:TIGR04523 113 KNDKEQKNKLEVELNKLEKQKKENKKNID-KFLTEIKKKE---KELEKLNNKYNDLKKQKEELENELNL----------- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 457 FEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHgARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLA 536
Cdd:TIGR04523 178 LEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKN-KSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 537 QTLQQQEQASQGLRH---QVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLataaeereaslrerdaaLKQLEALEKEK 613
Cdd:TIGR04523 257 QLKDEQNKIKKQLSEkqkELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDW-----------------NKELKSELKNQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 614 AAKLEILQQQLQVANEARDSAQTSVTQAQREK-------AELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQK 686
Cdd:TIGR04523 320 EKKLEEIQNQISQNNKIISQLNEQISQLKKELtnsesenSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESK 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 687 ATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKG 766
Cdd:TIGR04523 400 IQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINK 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 767 LEARLQQLgeahQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQygamFQEQLMTLKEECEKAR 846
Cdd:TIGR04523 480 IKQNLEQK----QKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKE----KESKISDLEDELNKDD 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 847 QELQeakekvagiESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKA 926
Cdd:TIGR04523 552 FELK---------KENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKA 622
|
....*
gi 2217283087 927 GEQQE 931
Cdd:TIGR04523 623 KKENE 627
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1164-1683 |
1.62e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1164 LETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLE 1243
Cdd:TIGR04523 42 LKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1244 KEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAaerssalreevqslrEEAEKQRvasENLRQELTSQAERAE 1323
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKY---------------NDLKKQK---EELENELNLLEKEKL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1324 ELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKhlcqqlqaeqaAAEKRHREELEQSKQAAGGLRAELLRAQ 1403
Cdd:TIGR04523 184 NIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELK-----------KQNNQLKDNIEKKQQEINEKTTEISNTQ 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1404 RELGELIPLRQKVAEQ-----------ERTAQQLRAEKASYAEQLSMLK--KAHGLLAEENRGLGERANLGRQfLEVELD 1470
Cdd:TIGR04523 253 TQLNQLKDEQNKIKKQlsekqkeleqnNKKIKELEKQLNQLKSEISDLNnqKEQDWNKELKSELKNQEKKLEE-IQNQIS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1471 QArEKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEgakvKVLEERQRFQEERQKLTAQVEELSKKLADSDQA 1550
Cdd:TIGR04523 332 QN-NKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE----KLKKENQSYKQEIKNLESQINDLESKIQNQEKL 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1551 SKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQ----LRSLEQ 1626
Cdd:TIGR04523 407 NQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSinkiKQNLEQ 486
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 1627 LQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDL 1683
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDL 543
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
590-715 |
1.75e-05 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 49.28 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 590 EEREASLRERDAALKQLEAlEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSR----------KVEELQACV 659
Cdd:COG1566 79 TDLQAALAQAEAQLAAAEA-QLARLEAELGAEAEIAAAEAQLAAAQAQLDLAQRELERYQAlykkgavsqqELDEARAAL 157
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217283087 660 ETARQEQHEAQAQVAELELQLRSEQQKATEKERVAqekdQLQEQLQALKESLKVTK 715
Cdd:COG1566 158 DAAQAQLEAAQAQLAQAQAGLREEEELAAAQAQVA----QAEAALAQAELNLARTT 209
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
894-1504 |
1.82e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.30 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 894 RAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGdrqpewleeqqgrqfcstqAALQAMERE 973
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAA-------------------LRLWFAQRR 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 974 AEQMGNELERLRAALmesqgqqqeergqqerevARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALA 1053
Cdd:COG4913 290 LELLEAELEELRAEL------------------ARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1054 HALTEKEGKDQELAK-LRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRteptgpkLEALRAEvskl 1132
Cdd:COG4913 352 RELEERERRRARLEAlLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAA-------LRDLRRE---- 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1133 eqqcqkqqeqadslERSLEAERASRAERDSAL-ETLQGQLEEKAQELGHSQSAL-----------------ASAQRELAA 1194
Cdd:COG4913 421 --------------LRELEAEIASLERRKSNIpARLLALRDALAEALGLDEAELpfvgelievrpeeerwrGAIERVLGG 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1195 FRTK--VqdhskaEDEWKAQVAR------------------GRQEAERKNSLISSLEEEVSI--------LNRQVLEKEG 1246
Cdd:COG4913 487 FALTllV------PPEHYAAALRwvnrlhlrgrlvyervrtGLPDPERPRLDPDSLAGKLDFkphpfrawLEAELGRRFD 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1247 ----ES-KELKRLVMAESEKSQ-KLEERLRLLQAETASNSA-----RAAERSSALREEVQSLREEAEkqrvASENLRQEL 1315
Cdd:COG4913 561 yvcvDSpEELRRHPRAITRAGQvKGNGTRHEKDDRRRIRSRyvlgfDNRAKLAALEAELAELEEELA----EAEERLEAL 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1316 TSQAERAEELGQELKAWQEKFFQkeqalstlQLEHTSTQALVSELlpakhlcqqlqaeqaaaeKRHREELEQSKQAAGGL 1395
Cdd:COG4913 637 EAELDALQERREALQRLAEYSWD--------EIDVASAEREIAEL------------------EAELERLDASSDDLAAL 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1396 RAELLRAQRELGElipLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGlLAEENRGLGERANLGRQFLEVELDQAREK 1475
Cdd:COG4913 691 EEQLEELEAELEE---LEEELDELKGEIGRLEKELEQAEEELDELQDRLE-AAEDLARLELRALLEERFAAALGDAVERE 766
|
650 660
....*....|....*....|....*....
gi 2217283087 1476 YVQELAAVRADAETRLAEVQREAQSTARE 1504
Cdd:COG4913 767 LRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
777-1198 |
1.82e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 50.05 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 777 AHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYgamfQEQLMTLKEECEKARQELQEAKEKV 856
Cdd:PRK10929 20 ATAPDEKQITQELEQAKAAKTPAQAEIVEALQSALNWLEERKGSLERAKQY----QQVIDNFPKLSAELRQQLNNERDEP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 857 AGIESHSE--------LQISRQQNElaelhanLARALQQVQEkevRAQKLADDLSTLQekmaatskevarletlvrkagE 928
Cdd:PRK10929 96 RSVPPNMStdaleqeiLQVSSQLLE-------KSRQAQQEQD---RAREISDSLSQLP---------------------Q 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 929 QQETASRELVKEPARAGDR-QPEWLEEQQgrQFCSTQAALQAMEREAEQMgnELERLRaalmesqgqqqeergqqerevA 1007
Cdd:PRK10929 145 QQTEARRQLNEIERRLQTLgTPNTPLAQA--QLTALQAESAALKALVDEL--ELAQLS---------------------A 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1008 RLTQERGRAQADLALEKAARAELEMR-LQNALNEQRVEFAtlQEALAHA--LTEKEGK-----DQELAKLRGLEAA---Q 1076
Cdd:PRK10929 200 NNRQELARLRSELAKKRSQQLDAYLQaLRNQLNSQRQREA--ERALESTelLAEQSGDlpksiVAQFKINRELSQAlnqQ 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1077 IKELEEL----RQTVKQLKE--QLAKKEKEHASGSGAqSEAAGrteptgpklEALRAEVSKLEQQCQKQQeqadsLERSL 1150
Cdd:PRK10929 278 AQRMDLIasqqRQAASQTLQvrQALNTLREQSQWLGV-SNALG---------EALRAQVARLPEMPKPQQ-----LDTEM 342
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1151 EAERASRAERDSALETLQgQLEEKAQELGhsqSALASAQREL--AAFRTK 1198
Cdd:PRK10929 343 AQLRVQRLRYEDLLNKQP-QLRQIRQADG---QPLTAEQNRIldAQLRTQ 388
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
318-991 |
1.83e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.06 E-value: 1.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 318 EENGDLSFKLREFASHLQQLQ-DALNELTEEHSKATQEWLEKQAQLEKELSAALqdkkcleekneILQGKLSQLeehlsq 396
Cdd:PRK03918 78 EKNGRKYRIVRSFNRGESYLKyLDGSEVLEEGDSSVREWVERLIPYHVFLNAIY-----------IRQGEIDAI------ 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 397 LQDNPPQEKgeVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQE--AKLLAERGHFEEEKQQ----LSSLITD 470
Cdd:PRK03918 141 LESDESREK--VVRQILGLDDYENAYKNLGEVIKEIKRRIERLEKFIKRTEniEELIKEKEKELEEVLReineISSELPE 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 471 LQSSISNLSQAKEELEqASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLR 550
Cdd:PRK03918 219 LREELEKLEKEVKELE-ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 551 hqVEQLSSSLKQKEQQLKEVAEKQEatrqdhaqQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEA 630
Cdd:PRK03918 298 --LSEFYEEYLDELREIEKRLSRLE--------EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEA 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 631 RdsaqTSVTQAQREKAELS-RKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEkdqlqeqLQALKE 709
Cdd:PRK03918 368 K----AKKEELERLKKRLTgLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEE-------LKKAKG 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 710 SLKVTKGSLEEEKRraADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETevLRREL 789
Cdd:PRK03918 437 KCPVCGRELTEEHR--KELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKE--LEEKL 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 790 AEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISR 869
Cdd:PRK03918 513 KKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEE 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 870 QQNELAELHA---NLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEV----ARLETLVRKAGEQQETASRELVKEPA 942
Cdd:PRK03918 593 RLKELEPFYNeylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLeelrKELEELEKKYSEEEYEELREEYLELS 672
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 2217283087 943 RAGDRQPEWLEEQQGRqfcstqaaLQAMEREAEQMGNELERLRAALMES 991
Cdd:PRK03918 673 RELAGLRAELEELEKR--------REEIKKTLEKLKEELEEREKAKKEL 713
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
204-654 |
1.94e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 50.18 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 204 PMGDILQTPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAasplEPKELEELRD 283
Cdd:PRK10246 423 PLRQRLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEA----RIKDLEAQRA 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 284 KNES------LTMRLHETLKQCQDLKTEKSQ-----MDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKAT 352
Cdd:PRK10246 499 QLQAgqpcplCGSTSHPAVEAYQALEPGVNQsrldaLEKEVKKLGEEGAALRGQLDALTKQLQRDESEAQSLRQEEQALT 578
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 353 QEWLEKQAQLEKELSAALQDKKCLEEKNEILQgKLSQL-EEHLSQLQDNPPQEKgevlgdVLQLEtlKQEAATLAANNTQ 431
Cdd:PRK10246 579 QQWQAVCASLNITLQPQDDIQPWLDAQEEHER-QLRLLsQRHELQGQIAAHNQQ------IIQYQ--QQIEQRQQQLLTA 649
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 432 LQARVEMLETErgQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQ--ASQAHGARLTA--------QVA 501
Cdd:PRK10246 650 LAGYALTLPQE--DEEASWLATRQQEAQSWQQRQNELTALQNRIQQLTPLLETLPQsdDLPHSEETVALdnwrqvheQCL 727
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 502 SLTSELTTLNATIQQQDQELAGLKQQ---AKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATR 578
Cdd:PRK10246 728 SLHSQLQTLQQQDVLEAQRLQKAQAQfdtALQASVFDDQQAFLAALLDEETLTQLEQLKQNLENQRQQAQTLVTQTAQAL 807
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217283087 579 QDHaQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAqrekAELSRKVEE 654
Cdd:PRK10246 808 AQH-QQHRPDGLDLTVTVEQIQQELAQLAQQLRENTTRQGEIRQQLKQDADNRQQQQALMQQI----AQATQQVED 878
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1227-1656 |
2.29e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.72 E-value: 2.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1227 ISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLlqaeTASNSARAAERSSALREEVQSLREEAEKQRV 1306
Cdd:pfam05483 235 INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKL----QDENLKELIEKKDHLTKELEDIKMSLQRSMS 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1307 ASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLpakhlcqqlqaeqaaaeKRHREELE 1386
Cdd:pfam05483 311 TQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELL-----------------RTEQQRLE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1387 QSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKasyaEQLSMLKKAHGLLAEENRGLGERAnlgrqfle 1466
Cdd:pfam05483 374 KNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAED----EKLLDEKKQFEKIAEELKGKEQEL-------- 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1467 VELDQAREKYVQELaavradaETRLAEVQREAQSTARELEVMTAKYEGAKVKVLE---ERQRFQEERQKLTAQ----VEE 1539
Cdd:pfam05483 442 IFLLQAREKEIHDL-------EIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIEltaHCDKLLLENKELTQEasdmTLE 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1540 LSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQA-------QLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQ 1612
Cdd:pfam05483 515 LKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESvreefiqKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILEN 594
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2217283087 1613 Q----NQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAE 1656
Cdd:pfam05483 595 KcnnlKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLE 642
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1198-1325 |
2.60e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.47 E-value: 2.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1198 KVQDHSKAEDEWKAQVARGRQEAERknsliSSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAEtA 1277
Cdd:COG2433 384 ELIEKELPEEEPEAEREKEHEEREL-----TEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSE-E 457
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2217283087 1278 SNSARAAERSSALREEVQSLREEAEKQRVASENLRQELtsqaERAEEL 1325
Cdd:COG2433 458 RREIRKDREISRLDREIERLERELEEERERIEELKRKL----ERLKEL 501
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
431-791 |
3.74e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.19 E-value: 3.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 431 QLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSL--------ITDLQSSISNLSQAKEELEQASQAhgARLTAQVAS 502
Cdd:PRK04863 841 QLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALnrllprlnLLADETLADRVEEIREQLDEAEEA--KRFVQQHGN 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 503 LTSELTTLNATIQQQDQELAGLKQQAKekqaqlaqtlqqqeqasqglrhQVEQLSSSLKQKEQQLKEVAEKQEATRQDHA 582
Cdd:PRK04863 919 ALAQLEPIVSVLQSDPEQFEQLKQDYQ----------------------QAQQTQRDAKQQAFALTEVVQRRAHFSYEDA 976
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 583 QQLATAAEEREASLRERdaaLKQLEalekekaakleilqqqlqvanEARDSAQTSVTQAQREKAELSRKVEELQACVETA 662
Cdd:PRK04863 977 AEMLAKNSDLNEKLRQR---LEQAE---------------------QERTRAREQLRQAQAQLAQYNQVLASLKSSYDAK 1032
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 663 RQEQHEAQAQVAELELQLRSEqqkatEKERVAQEKDQLQEQL---QALKESLKVTKGSLEEEKRRAADALEEQQRCISEL 739
Cdd:PRK04863 1033 RQMLQELKQELQDLGVPADSG-----AEERARARRDELHARLsanRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEM 1107
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 740 kaetRSLVEQHkrerkeleeeragrKGLEARLQQLGEAHQAETEVLRRELAE 791
Cdd:PRK04863 1108 ----REQVVNA--------------KAGWCAVLRLVKDNGVERRLHRRELAY 1141
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
230-681 |
3.78e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.88 E-value: 3.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 230 RDELELELAENRKLLTEKDAQIAMMQQRIDRLAllnekQAASPLEpKELEELRDKNESLTMRLHETLKQCQDLKTEKSQM 309
Cdd:PRK02224 316 REELEDRDEELRDRLEECRVAAQAHNEEAESLR-----EDADDLE-ERAEELREEAAELESELEEAREAVEDRREEIEEL 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 310 DRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEhskatqewlekqaqlEKELSAALQDKKCLEEKNEILQ--GKL 387
Cdd:PRK02224 390 EEEIEELRERFGDAPVDLGNAEDFLEELREERDELRER---------------EAELEATLRTARERVEEAEALLeaGKC 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 388 SQLEEhlsQLQDNPpqekgevlgDVLQLETLKQEAATLAANNTQLQARVEMLET--ERGQQEAKLLAERGHFEEEKQQLS 465
Cdd:PRK02224 455 PECGQ---PVEGSP---------HVETIEEDRERVEELEAELEDLEEEVEEVEErlERAEDLVEAEDRIERLEERREDLE 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 466 SLITDLQSSISNLSQAKEEL-----EQASQAHGARLTAQVASLTSE-----LTTLNATIQQQDQELAGLkqqakEKQAQL 535
Cdd:PRK02224 523 ELIAERRETIEEKRERAEELreraaELEAEAEEKREAAAEAEEEAEeareeVAELNSKLAELKERIESL-----ERIRTL 597
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 536 AQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEvaekqeatRQDHAQQLATAAEEreaslrerdAALKQLEALEKEKAA 615
Cdd:PRK02224 598 LAAIADAEDEIERLREKREALAELNDERRERLAE--------KRERKRELEAEFDE---------ARIEEAREDKERAEE 660
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 616 KLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQAC------VETARQEQHEAQAQVAELELQLR 681
Cdd:PRK02224 661 YLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERREALenrveaLEALYDEAEELESMYGDLRAELR 732
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
264-948 |
4.36e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.56 E-value: 4.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 264 LNEKQAASPLEPKELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNE 343
Cdd:pfam05483 108 LQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMD 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 344 LTEEHSKATQEWLEKQAQLEK---ELSAAL-QDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLK 419
Cdd:pfam05483 188 LNNNIEKMILAFEELRVQAENarlEMHFKLkEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESR 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 420 QEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELE-QASQAHGARLTA 498
Cdd:pfam05483 268 DKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEaQMEELNKAKAAH 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 499 QVasLTSELTTLNATIqqqdQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEaTR 578
Cdd:pfam05483 348 SF--VVTEFEATTCSL----EELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDE-KL 420
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 579 QDHAQQLATAAEEREASLRErdaalkqLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQAC 658
Cdd:pfam05483 421 LDEKKQFEKIAEELKGKEQE-------LIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAH 493
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 659 VETARQEQHEAQAQVAELELQLRSEQQK----ATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQR 734
Cdd:pfam05483 494 CDKLLLENKELTQEASDMTLELKKHQEDiincKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEE 573
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 735 CISELKAETRSLVEQHKRERKELEEEragRKGLEARLQQLGEAHQaETEVLRRELAEAMAAQHTAESECEQLVKEVAAWR 814
Cdd:pfam05483 574 NARSIEYEVLKKEKQMKILENKCNNL---KKQIENKNKNIEELHQ-ENKALKKKGSAENKQLNAYEIKVNKLELELASAK 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 815 ERYE---DSQQEEAQYGAMFQEQLMtlkEECEKARQELQEAKEKVAGIESHSELQISrQQNELAELHANLARALQQVQEK 891
Cdd:pfam05483 650 QKFEeiiDNYQKEIEDKKISEEKLL---EEVEKAKAIADEAVKLQKEIDKRCQHKIA-EMVALMEKHKHQYDKIIEERDS 725
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 892 EV-----RAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQ 948
Cdd:pfam05483 726 ELglyknKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
251-494 |
5.57e-05 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 48.36 E-value: 5.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 251 IAMMQQRIDRLALLNEK--QAASPLEP--KELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFK 326
Cdd:PLN02939 134 VGMIQNAEKNILLLNQArlQALEDLEKilTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIR 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 327 LREFASHLQQLQDALNELTEEHS--KATQEWL-----------EKQAQLEKE---LSAALQDkkcLEEKNEILQGKLSQl 390
Cdd:PLN02939 214 GATEGLCVHSLSKELDVLKEENMllKDDIQFLkaelievaeteERVFKLEKErslLDASLRE---LESKFIVAQEDVSK- 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 391 eehLSQLQDNPPQEKGEVLGDVLQLETLKQE-AATLAANNTQLQARVEMLETERG---------------QQEAKLLAEr 454
Cdd:PLN02939 290 ---LSPLQYDCWWEKVENLQDLLDRATNQVEkAALVLDQNQDLRDKVDKLEASLKeanvskfssykvellQQKLKLLEE- 365
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2217283087 455 gHFEEEKQQLSSLITDLQSSIS----NLSQAKEELEQASQAHGA 494
Cdd:PLN02939 366 -RLQASDHEIHSYIQLYQESIKefqdTLSKLKEESKKRSLEHPA 408
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
378-604 |
6.03e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 6.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 378 EKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHF 457
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 458 EEEKQQLSSLITDLQ--------------SSISNLSQAKEELEQASQAHGARLTAQVASLTsELTTLNATIQQQDQELAG 523
Cdd:COG4942 100 EAQKEELAELLRALYrlgrqpplalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLA-ELAALRAELEAERAELEA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 524 LKQQAKEKQAQLAQTLQQQEQasqglrhQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAAL 603
Cdd:COG4942 179 LLAELEEERAALEALKAERQK-------LLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAAL 251
|
.
gi 2217283087 604 K 604
Cdd:COG4942 252 K 252
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1157-1673 |
6.12e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.50 E-value: 6.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1157 RAERDSALETLQGQLEEKAQELGHSqsALASAQRELAAFRTKVQDHskaeDEWKAQVARGRQEA-------ERKNSLISS 1229
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKDLHE--RLNGLESELAELDEEIERY----EEQREQARETRDEAdevleehEERREELET 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1230 LEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSA---RAAERSSALREEVQSLREEAEKQRV 1306
Cdd:PRK02224 256 LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDAdaeAVEARREELEDRDEELRDRLEECRV 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1307 ASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELlpakhlcqqlqaeqaaaekrhREELE 1386
Cdd:PRK02224 336 AAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEEL---------------------EEEIE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1387 QSKQAAGGLRAELLRAQRELGELIPLRQKVAEQERTaqqLRAEKASYAEQLsmlkkahgllaEENRGLGERANLGRQFLE 1466
Cdd:PRK02224 395 ELRERFGDAPVDLGNAEDFLEELREERDELREREAE---LEATLRTARERV-----------EEAEALLEAGKCPECGQP 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1467 VE-------LDQAREKyVQELAAVRADAETRLAEVqreaqstarelevmtakyegakvkvlEERQRFQEERQKLTAQVEE 1539
Cdd:PRK02224 461 VEgsphvetIEEDRER-VEELEAELEDLEEEVEEV--------------------------EERLERAEDLVEAEDRIER 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1540 LSKKLADSDQaskvqqqkLKAVQAQGGESQQE-AQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQ 1618
Cdd:PRK02224 514 LEERREDLEE--------LIAERRETIEEKRErAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELK 585
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 1619 EQLRSLEQL---QKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQV 1673
Cdd:PRK02224 586 ERIESLERIrtlLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEF 643
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
550-856 |
7.23e-05 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 47.55 E-value: 7.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 550 RHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASL-----RERDAALKQLEALEKEKAAKLEILQQQL 624
Cdd:pfam02029 19 RRRQKEEEEPSGQVTESVEPNEHNSYEEDSELKPSGQGGLDEEEAFLdrtakREERRQKRLQEALERQKEFDPTIADEKE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 625 QVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAElelqlRSEQQKATEKERvAQEKDQLQEQL 704
Cdd:pfam02029 99 SVAERKENNEEEENSSWEKEEKRDSRLGRYKEEETEIREKEYQENKWSTEV-----RQAEEEGEEEED-KSEEAEEVPTE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 705 QALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETR-SLVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETE 783
Cdd:pfam02029 173 NFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGeEEVTKLKVTTKRRQGGLSQSQEREEEAEVFLEAEQKLEE 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 784 VLRR-------ELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQ----QEEAQYGAMFQEQLMTLKEECEKARQELQEA 852
Cdd:pfam02029 253 LRRRrqekeseEFEKLRQKQQEAELELEELKKKREERRKLLEEEEqrrkQEEAERKLREEEEKRRMKEEIERRRAEAAEK 332
|
....
gi 2217283087 853 KEKV 856
Cdd:pfam02029 333 RQKL 336
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
554-1351 |
7.46e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.19 E-value: 7.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 554 EQLSSSLKQKEQQLKEVAEKQEATRQDHaqqlataaEEREASLRERDAALK-QLEALEKEKAAKLEILQQQLQVANEARD 632
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELH--------EKQKFYLRQSVIDLQtKLQEMQMERDAMADIRRRESQSQEDLRN 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 633 SAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEK--ERVAQEKDQLQEQLQALKES 710
Cdd:pfam15921 146 QLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKiyEHDSMSTMHFRSLGSAISKI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 711 LKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHkrerkeleeeragrkglEARLQQLGEAHQAETEVLRRELA 790
Cdd:pfam15921 226 LRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQH-----------------QDRIEQLISEHEVEITGLTEKAS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 791 EAMAAQHTAESECEQLvkevaawreryedsQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQ 870
Cdd:pfam15921 289 SARSQANSIQSQLEII--------------QEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLA 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 871 QNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARL-------ETLVRKAGEQQETASRELVKEPAR 943
Cdd:pfam15921 355 NSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLwdrdtgnSITIDHLRRELDDRNMEVQRLEAL 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 944 AGDRQPEwLEEQQGRQFCSTQAALQAMEREAE---QMGNELERLRaALMESQGQQQEERGQQEREVARLT---QERGRA- 1016
Cdd:pfam15921 435 LKAMKSE-CQGQMERQMAAIQGKNESLEKVSSltaQLESTKEMLR-KVVEELTAKKMTLESSERTVSDLTaslQEKERAi 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1017 QADLALEKAARAELEMRLQnalneQRVEFATLQEALAHALTEKEGkdqelakLRGLEAAQIKELEELRQTVKQLKEQLAK 1096
Cdd:pfam15921 513 EATNAEITKLRSRVDLKLQ-----ELQHLKNEGDHLRNVQTECEA-------LKLQMAEKDKVIEILRQQIENMTQLVGQ 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1097 KEKehASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRA--ERDSALETLQGQLEEK 1174
Cdd:pfam15921 581 HGR--TAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAgsERLRAVKDIKQERDQL 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1175 AQELGHSQSALASAQRELAA----FRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEE------EVSI-LNRQVLE 1243
Cdd:pfam15921 659 LNEVKTSRNELNSLSEDYEVlkrnFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGsdghamKVAMgMQKQITA 738
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1244 KEGESKELKRLVMAESEKSQKLEERLRLLQAEtasnSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAE 1323
Cdd:pfam15921 739 KRGQIDALQSKIQFLEEAMTNANKEKHFLKEE----KNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALD 814
|
810 820
....*....|....*....|....*...
gi 2217283087 1324 ELGQELKAWQEKFFQKEQALSTLQLEHT 1351
Cdd:pfam15921 815 KASLQFAECQDIIQRQEQESVRLKLQHT 842
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
971-1657 |
7.76e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.04 E-value: 7.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 971 EREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQE 1050
Cdd:TIGR00618 195 KAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1051 ALA-HALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQ-LKEQLAKKEKEHASGSGAQSEAAgRTEPTGPKLEALRAE 1128
Cdd:TIGR00618 275 QEAvLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTeLQSKMRSRAKLLMKRAAHVKQQS-SIEEQRRLLQTLHSQ 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1129 VSKLEQQCQKQQEQADSLERSLEAERASRAERDSaLETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDE 1208
Cdd:TIGR00618 354 EIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQ-KTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQ 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1209 WKAQVARGRQEAERKNSLISSLEEEVSILNR---QVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAE----TASNSA 1281
Cdd:TIGR00618 433 QELQQRYAELCAAAITCTAQCEKLEKIHLQEsaqSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEpcplCGSCIH 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1282 RAAERSSALREEVQSLREEAEKQRVAS-----ENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQAL 1356
Cdd:TIGR00618 513 PNPARQDIDNPGPLTRRMQRGEQTYAQletseEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNI 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1357 VSELLPAKhlcqqlqaeqaaaekrhREELEQSKQAAGGLRAELLRAQRELGELiPLRQKVAEQERTAQQLRAEKASYAEQ 1436
Cdd:TIGR00618 593 TVRLQDLT-----------------EKLSEAEDMLACEQHALLRKLQPEQDLQ-DVRLHLQQCSQELALKLTALHALQLT 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1437 LSMLKKAHGLLAeeNRGLGERANLGRQFLEVELdQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAK 1516
Cdd:TIGR00618 655 LTQERVREHALS--IRVLPKELLASRQLALQKM-QSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLG 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1517 VKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHY 1596
Cdd:TIGR00618 732 SDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQE 811
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 1597 KLQMEKAKTHYDAKkqQNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQ 1657
Cdd:TIGR00618 812 IPSDEDILNLQCET--LVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
307-527 |
8.18e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 47.70 E-value: 8.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 307 SQMDR----KINQLSEENGDLSFKLRefasHLQQLQDALNELTEEHSKATQEWL-EKQAQLEKELSAALQDKKCLEEKNE 381
Cdd:PHA02562 166 SEMDKlnkdKIRELNQQIQTLDMKID----HIQQQIKTYNKNIEEQRKKNGENIaRKQNKYDELVEEAKTIKAEIEELTD 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 382 ILQGKLSQLE---EHLSQLQDNPPQEKGEVL-----------GDVL-----QLETLKQEAATLAANNTQLQARVEMLETE 442
Cdd:PHA02562 242 ELLNLVMDIEdpsAALNKLNTAAAKIKSKIEqfqkvikmyekGGVCptctqQISEGPDRITKIKDKLKELQHSLEKLDTA 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 443 RGQQEAKllaerghfEEEKQQLSSLITDLQSSISNLSQA-KEELEQASQAHGA--RLTAQVASLTSELTTLNATIQQQDQ 519
Cdd:PHA02562 322 IDELEEI--------MDEFNEQSKKLLELKNKISTNKQSlITLVDKAKKVKAAieELQAEFVDNAEELAKLQDELDKIVK 393
|
....*...
gi 2217283087 520 ELAGLKQQ 527
Cdd:PHA02562 394 TKSELVKE 401
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
866-988 |
8.24e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 47.27 E-value: 8.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 866 QISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETL-VRKAGEQQETASRELVKEPARA 944
Cdd:PRK09039 47 EISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALlAELAGAGAAAEGRAGELAQELD 126
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217283087 945 --------GDRQPEWLEEQQG---RQFCSTQAALQAMEREAEQMGNELE----RLRAAL 988
Cdd:PRK09039 127 sekqvsarALAQVELLNQQIAalrRQLAALEAALDASEKRDRESQAKIAdlgrRLNVAL 185
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
300-531 |
8.31e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 8.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 300 QDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEwlekQAQLEKELSAALQDKKCLEEK 379
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE----LAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 380 NEILQGKLSQLeehLSQLQDNPPQEKGEVLgdvLQLETLKQEAATLAANNTQLQARVEMLETERGQQEaKLLAERGHFEE 459
Cdd:COG4942 99 LEAQKEELAEL---LRALYRLGRQPPLALL---LSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA-ELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 460 EKQQLSSLITDLQssisnlsQAKEELEQASQAHG---ARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEK 531
Cdd:COG4942 172 ERAELEALLAELE-------EERAALEALKAERQkllARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
607-741 |
8.54e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 47.55 E-value: 8.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 607 EALEKEKAaklEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQK 686
Cdd:COG2433 380 EALEELIE---KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSE 456
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 687 ATEKERVAQEkdqlqeqLQALKESLKVTKGSLEEEKRRaadaLEEQQRCISELKA 741
Cdd:COG2433 457 ERREIRKDRE-------ISRLDREIERLERELEEERER----IEELKRKLERLKE 500
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
207-930 |
9.10e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 47.73 E-value: 9.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 207 DILQTPQF--QMRRLKKQLADERSNRDELELELaenRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEELRDK 284
Cdd:TIGR00606 177 EIFSATRYikALETLRQVRQTQGQKVQEHQMEL---KYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNR 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 285 NEsltmRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFashLQQLQDALNELTEEHSKATQEWLEKQAQLEK 364
Cdd:TIGR00606 254 LK----EIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKV---FQGTDEQLNDLYHNHQRTVREKERELVDCQR 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 365 ELSAALQDKKCLEEKNEILQGKLSQLeehlsQLQDNPPQEKgevlgdVLQLETLKQEAATlaanNTQLQARVEMLETERG 444
Cdd:TIGR00606 327 ELEKLNKERRLLNQEKTELLVEQGRL-----QLQADRHQEH------IRARDSLIQSLAT----RLELDGFERGPFSERQ 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 445 QQEAKLLAERGHfEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGL 524
Cdd:TIGR00606 392 IKNFHTLVIERQ-EDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSS 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 525 KQQAKekqaqlaqtlqqqeqASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALK 604
Cdd:TIGR00606 471 DRILE---------------LDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRT 535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 605 QLEALEKEKAAKleilQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELEL---QLR 681
Cdd:TIGR00606 536 QMEMLTKDKMDK----DEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQnknHIN 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 682 SEQQKATEKERVAQEK-------DQLQEQLQALKESLKvtKGSLEEEKRRAADALEEQQrcISELKAETRSLVEQHKRER 754
Cdd:TIGR00606 612 NELESKEEQLSSYEDKlfdvcgsQDEESDLERLKEEIE--KSSKQRAMLAGATAVYSQF--ITQLTDENQSCCPVCQRVF 687
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 755 KELEEERAGRKGLEARLQQLG---EAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMF 831
Cdd:TIGR00606 688 QTEAELQEFISDLQSKLRLAPdklKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDI 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 832 QEQ---LMTLKEECEKARQEL------QEAKEKVAGIESHSELQISRQQNelAELHANLARALQQVQEKEVRAQKLADDL 902
Cdd:TIGR00606 768 EEQetlLGTIMPEEESAKVCLtdvtimERFQMELKDVERKIAQQAAKLQG--SDLDRTVQQVNQEKQEKQHELDTVVSKI 845
|
730 740
....*....|....*....|....*...
gi 2217283087 903 STLQEKMAATSKEVARLETLVRKAGEQQ 930
Cdd:TIGR00606 846 ELNRKLIQDQQEQIQHLKSKTNELKSEK 873
|
|
| valS |
PRK05729 |
valyl-tRNA synthetase; Reviewed |
1465-1584 |
9.66e-05 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 235582 [Multi-domain] Cd Length: 874 Bit Score: 47.79 E-value: 9.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1465 LEVELDQAREKYVQELAAVRADAE--TRLAEVQREAQSTARELEVMTAKYEGAKVKV-LE-------ERQRFQEERQKLT 1534
Cdd:PRK05729 745 LPLLLKGADAEDRARLEANEAYIKrlARLESLEILADDEEAPEGAASAVVGGAELFLpLEglidveaELARLEKELAKLE 824
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1535 AQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQA 1584
Cdd:PRK05729 825 KEIERVEKKLSNEGFVAKAPEEVVEKEREKLAEYEEKLAKLKERLARLKA 874
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
549-720 |
1.04e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.32 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 549 LRHQVEQLSSSLKQKEQQLKEVAEKQ-----EATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEI---- 619
Cdd:COG3206 180 LEEQLPELRKELEEAEAALEEFRQKNglvdlSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDAlpel 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 620 --------LQQQLQVANEARDSAQT-------SVTQAQREKAELSRKV-EELQACVETARQEQHEAQAQVAELELQLRSE 683
Cdd:COG3206 260 lqspviqqLRAQLAELEAELAELSArytpnhpDVIALRAQIAALRAQLqQEAQRILASLEAELEALQAREASLQAQLAQL 339
|
170 180 190
....*....|....*....|....*....|....*..
gi 2217283087 684 QQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEE 720
Cdd:COG3206 340 EARLAELPELEAELRRLEREVEVARELYESLLQRLEE 376
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1045-1201 |
1.10e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 46.88 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1045 FATLQEALAHALTekeGKDQELAKLrgleAAQIKELEEL----RQTVKQLKEQLAKkekEHASGSGAQSEAAgrteptgp 1120
Cdd:PRK09039 37 FVVAQFFLSREIS---GKDSALDRL----NSQIAELADLlsleRQGNQDLQDSVAN---LRASLSAAEAERS-------- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1121 KLEALRAEVSkleQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQ 1200
Cdd:PRK09039 99 RLQALLAELA---GAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIA 175
|
.
gi 2217283087 1201 D 1201
Cdd:PRK09039 176 D 176
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1075-1501 |
1.28e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1075 AQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEA--LRAEVSKLEQQCQKQQEQADSLERSLEA 1152
Cdd:COG4717 78 EELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLlpLYQELEALEAELAELPERLEELEERLEE 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1153 ER---ASRAERDSALETLQGQLEEKAQELG-HSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLIS 1228
Cdd:COG4717 158 LReleEELEELEAELAELQEELEELLEQLSlATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELE 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1229 SLEEEVSIL-NRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVA 1307
Cdd:COG4717 238 AAALEERLKeARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELE 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1308 SENLRQELTS-------QAERAEELGQELKAWQEKFFQKEQALSTLQLEHtsTQALVSELLPAKHLCQQLQAEQAAAEKR 1380
Cdd:COG4717 318 EEELEELLAAlglppdlSPEELLELLDRIEELQELLREAEELEEELQLEE--LEQEIAALLAEAGVEDEEELRAALEQAE 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1381 HREELEQSKQAAgglrAELLRAQRELGELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANL 1460
Cdd:COG4717 396 EYQELKEELEEL----EEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGEL 471
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2217283087 1461 GRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQST 1501
Cdd:COG4717 472 AELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1146-1541 |
1.37e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.25 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1146 LERSLEAERASRAERDsALETLQGQLEEKAQELGHsqsaLASAQRELAafrtkvQDHSKAEDeWKAQVargrQEAERKNS 1225
Cdd:COG3096 284 SERALELRRELFGARR-QLAEEQYRLVEMARELEE----LSARESDLE------QDYQAASD-HLNLV----QTALRQQE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1226 LISSLEEEVSILNRQVLEKEGESKELKrlvmaesEKSQKLEERLRLLQAETASNSARAAERSSALreEVQSLREEAEKQR 1305
Cdd:COG3096 348 KIERYQEDLEELTERLEEQEEVVEEAA-------EQLAEAEARLEAAEEEVDSLKSQLADYQQAL--DVQQTRAIQYQQA 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1306 VASENLRQELTSQAERAEElgqELKAWQEKFFQKEQALStlqlehtstqalvSELLPAKHlcqqLQAEQAAAEKRHREEL 1385
Cdd:COG3096 419 VQALEKARALCGLPDLTPE---NAEDYLAAFRAKEQQAT-------------EEVLELEQ----KLSVADAARRQFEKAY 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1386 EQSKQAAGGLRA--------ELLRAQREL----GELIPLRQKVAEQERTAQQLR-------------AEKASYAEQLSML 1440
Cdd:COG3096 479 ELVCKIAGEVERsqawqtarELLRRYRSQqalaQRLQQLRAQLAELEQRLRQQQnaerlleefcqriGQQLDAAEELEEL 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1441 KKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYvQELAA------VRADAETRLAEVQREAQSTARELEVMTAKYEG 1514
Cdd:COG3096 559 LAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARI-KELAArapawlAAQDALERLREQSGEALADSQEVTAAMQQLLE 637
|
410 420
....*....|....*....|....*..
gi 2217283087 1515 AKVKVLEERQRFQEERQKLTAQVEELS 1541
Cdd:COG3096 638 REREATVERDELAARKQALESQIERLS 664
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
280-580 |
1.48e-04 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 46.11 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 280 ELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENgdlSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQ 359
Cdd:pfam09311 20 ETRDQVKKLQEMLRQANDQLEKTMKDKKELEDKMNQLSEET---SNQVSTLAKRNQKSETLLDELQQAFSQAKRNFQDQL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 360 AQLEKELSAALQDKKCLEEKNEILQGKLSqleehlsqlqdnppqekgevlgdvLQLETLKQEAATLAANNTQLQARVEML 439
Cdd:pfam09311 97 AVLMDSREQVSDELVRLQKDNESLQGKHS------------------------LHVSLQQAEKFDMPDTVQELQELVLKY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 440 ETErgqqeakLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQ 519
Cdd:pfam09311 153 REE-------LIEVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQAEIENCKEEIASISSLKVELERIKAEKEQ 225
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217283087 520 ELAGLKQQAK--EKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQD 580
Cdd:pfam09311 226 LENGLTEKIRqlEDLQTTKGSLETQLKKETNEKAAVEQLVFEEKNKAQRLQTELDVSEQVQRD 288
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
222-741 |
1.96e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 46.74 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 222 QLADERSNRDELELELAENRKLLT---EKDAQIAMMQQRIDRLALlnekqaasplepkELEELRDKNESLTMRLHETLKQ 298
Cdd:pfam10174 210 HLREELHRRNQLQPDPAKTKALQTvieMKDTKISSLERNIRDLED-------------EVQMLKTNGLLHTEDREEEIKQ 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 299 CQDLKTEKSQMDRKINQLSEEngdlsfkLREFASHLQQLQDALNELTEEHSKATQEWlekqAQLEKELSAALQDKKCLEE 378
Cdd:pfam10174 277 MEVYKSHSKFMKNKIDQLKQE-------LSKKESELLALQTKLETLTNQNSDCKQHI----EVLKESLTAKEQRAAILQT 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 379 KNEILQGKLSQLEEHLSQLQDnppqekgevlgdvlQLETLKQEAATLAANNTQLQarvEMLETergqQEAKLLAERGHFE 458
Cdd:pfam10174 346 EVDALRLRLEEKESFLNKKTK--------------QLQDLTEEKSTLAGEIRDLK---DMLDV----KERKINVLQKKIE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 459 EEKQQLSslitDLQSSISNLSQAKEELEQASqahgarltaqvASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQT 538
Cdd:pfam10174 405 NLQEQLR----DKDKQLAGLKERVKSLQTDS-----------SNTDTALTTLEEALSEKERIIERLKEQREREDRERLEE 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 539 LQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVaekqeatrQDHAQQLATaaeereaSLRERDAALKQLEALEKEKAAKLE 618
Cdd:pfam10174 470 LESLKKENKDLKEKVSALQPELTEKESSLIDL--------KEHASSLAS-------SGLKKDSKLKSLEIAVEQKKEECS 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 619 ILQQQLQVANEARDSAQTsvtqaqreKAELSRKVEELQACVETARQEQHEAQAQVAELELQLR-SEQQKATEKERVAQEK 697
Cdd:pfam10174 535 KLENQLKKAHNAEEAVRT--------NPEINDRIRLLEQEVARYKEESGKAQAEVERLLGILReVENEKNDKDKKIAELE 606
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 2217283087 698 DQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKA 741
Cdd:pfam10174 607 SLTLRQMKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLAD 650
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1159-1685 |
2.05e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.60 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1159 ERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILN 1238
Cdd:PRK03918 186 KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1239 RQVLEKEGESKELKRLV--MAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEkqrvasenlrqELT 1316
Cdd:PRK03918 266 ERIEELKKEIEELEEKVkeLKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIK-----------ELE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1317 SQAERAEELGQELKAWQEKFFQKEQALSTLQlehtstqalvsellpakhlcqqlqaeqaaAEKRHREELEQSKQAAGGLR 1396
Cdd:PRK03918 335 EKEERLEELKKKLKELEKRLEELEERHELYE-----------------------------EAKAKKEELERLKKRLTGLT 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1397 AEllRAQRELGELIPLRQKVAEQERTAQ----QLRAEKASYAEQLSMLKKAHGLLAEENRGLGE--RANLGRQFLEvELD 1470
Cdd:PRK03918 386 PE--KLEKELEELEKAKEEIEEEISKITarigELKKEIKELKKAIEELKKAKGKCPVCGRELTEehRKELLEEYTA-ELK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1471 QAREKyVQELAAVRADAETRLAEVQRE---------AQSTARELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVEELS 1541
Cdd:PRK03918 463 RIEKE-LKEIEEKERKLRKELRELEKVlkkeselikLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEI 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1542 KKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNEL----QAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQEL 1617
Cdd:PRK03918 542 KSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELgfesVEELEERLKELEPFYNEYLELKDAEKELEREEKEL 621
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 1618 QEQLRSLEQLQKENKELRAEAERLGHELQQagLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGK 1685
Cdd:PRK03918 622 KKLEEELDKAFEELAETEKRLEELRKELEE--LEKKYSEEEYEELREEYLELSRELAGLRAELEELEK 687
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
633-895 |
2.08e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 633 SAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKErvaQEKDQLQEQLQALKESLK 712
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALE---QELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 713 VTKGSLEEEKRRAADALEEQQRciSELKAETRSLVEQHKRERKELEEeragrkgleARLQQLGEAHQAETEVLRRELAEA 792
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYR--LGRQPPLALLLSPEDFLDAVRRL---------QYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 793 MAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYgamfQEQLMTLKEECEKARQELQEAKekvagieshselqisRQQN 872
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAER----QKLLARLEKELAELAAELAELQ---------------QEAE 223
|
250 260
....*....|....*....|...
gi 2217283087 873 ELAELHANLARALQQVQEKEVRA 895
Cdd:COG4942 224 ELEALIARLEAEAAAAAERTPAA 246
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1151-1361 |
2.24e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1151 EAERASRAERDSALETLQGQLEEKAQELghsqsalASAQRELAAFRTK-----VQDHSKAEDEwkaQVARGRQEAERKNS 1225
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKEL-------EEAEAALEEFRQKnglvdLSEEAKLLLQ---QLSELESQLAEARA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1226 LISSLEEEVSILNRQVLEKEGESKELkrlvmAESEKSQKLEERLRLLQAETASNSARAAERSS---ALREEVQSLR---- 1298
Cdd:COG3206 234 ELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSARYTPNHPdviALRAQIAALRaqlq 308
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217283087 1299 EEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELL 1361
Cdd:COG3206 309 QEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLL 371
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1471-1679 |
2.31e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1471 QAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVEELSKKLADSDQA 1550
Cdd:COG4942 37 AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1551 SKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLEQLQKE 1630
Cdd:COG4942 117 GRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAE 196
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2217283087 1631 NKELRAEAERLGHELQQAGLKTKEAEQTcrhLTAQVRSLEAQVAHADQQ 1679
Cdd:COG4942 197 RQKLLARLEKELAELAAELAELQQEAEE---LEALIARLEAEAAAAAER 242
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
235-486 |
2.34e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.61 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 235 LELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQ--------------AASPLEPKE-LEELRDKNESL--TMRLHETLK 297
Cdd:COG5022 803 LSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEevefslkaevliqkFGRSLKAKKrFSLLKKETIYLqsAQRVELAER 882
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 298 QCQDLKTEksqmDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWL---------EKQAQLEKELSA 368
Cdd:COG5022 883 QLQELKID----VKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKLLnnidleegpSIEYVKLPELNK 958
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 369 ALQDKKCLEEKNEILQGKLSQLEEHLSQLqdNPPQEKgevlgdvlqLETLKQEAATLAANNTQLQARVEMLEtERGQQEA 448
Cdd:COG5022 959 LHEVESKLKETSEEYEDLLKKSTILVREG--NKANSE---------LKNFKKELAELSKQYGALQESTKQLK-ELPVEVA 1026
|
250 260 270
....*....|....*....|....*....|....*...
gi 2217283087 449 KLLAERGHFEEEKQQLSSLiTDLQSSISNLSQAKEELE 486
Cdd:COG5022 1027 ELQSASKIISSESTELSIL-KPLQKLKGLLLLENNQLQ 1063
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
300-498 |
2.68e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.49 E-value: 2.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 300 QDLKTEKSQMDRKINQLSEENGDLSF---KLREFASHLQQLQDALNELTEEHskatqeWLEKQAQLEKELSAALQDKKCL 376
Cdd:PRK04863 840 RQLNRRRVELERALADHESQEQQQRSqleQAKEGLSALNRLLPRLNLLADET------LADRVEEIREQLDEAEEAKRFV 913
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 377 EEKneilQGKLSQLEEHLSQLQdNPPQEKGEVLGDVLQ----LETLKQEAATL----------------------AANNT 430
Cdd:PRK04863 914 QQH----GNALAQLEPIVSVLQ-SDPEQFEQLKQDYQQaqqtQRDAKQQAFALtevvqrrahfsyedaaemlaknSDLNE 988
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 431 QLQARVEMLETERGQQEAKLlaeRGHfEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTA 498
Cdd:PRK04863 989 KLRQRLEQAEQERTRAREQL---RQA-QAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADS 1052
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1016-1233 |
2.70e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 2.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1016 AQADLAleKAARAELEmRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLA 1095
Cdd:COG4942 17 AQADAA--AEAEAELE-QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1096 KKEKEHASGSGAQSE---AAGRTEPTGPKLEALRAE-VSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQL 1171
Cdd:COG4942 94 ELRAELEAQKEELAEllrALYRLGRQPPLALLLSPEdFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 1172 EEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEE 1233
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
560-769 |
2.75e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 560 LKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREaslRERDAALKQLEALEKEKAAKLEilqQQLQVANEARDSAQTSVT 639
Cdd:pfam17380 355 QEERKRELERIRQEEIAMEISRMRELERLQMERQ---QKNERVRQELEAARKVKILEEE---RQRKIQQQKVEMEQIRAE 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 640 QAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQ-LQALKESLKVTKGSL 718
Cdd:pfam17380 429 QEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQrRKILEKELEERKQAM 508
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 719 EEEKR-----------RAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEA 769
Cdd:pfam17380 509 IEEERkrkllekemeeRQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEA 570
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
236-744 |
2.80e-04 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 46.33 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 236 ELAENRKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEElrdknesltmrlhETLKQCQDLKTEKSQMDRKINQ 315
Cdd:PRK10246 364 ELAGWRAQFSQQTSDREQLRQWQQQLTHAEQKLNALPAITLTLTA-------------DEVAAALAQHAEQRPLRQRLVA 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 316 LSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQlekelsaaLQDKKCLEEKNEilqgKLSQLEEHLS 395
Cdd:PRK10246 431 LHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ--------LADVKTICEQEA----RIKDLEAQRA 498
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 396 QLQDNPP--------------QEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQE---AKLLAERGHFE 458
Cdd:PRK10246 499 QLQAGQPcplcgstshpaveaYQALEPGVNQSRLDALEKEVKKLGEEGAALRGQLDALTKQLQRDEseaQSLRQEEQALT 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 459 EEKQQLSS---LITDLQSSISNLSQAKEELEQA----SQAHgaRLTAQVASLTSELTTLNATIQQQDQ----ELAGLKQQ 527
Cdd:PRK10246 579 QQWQAVCAslnITLQPQDDIQPWLDAQEEHERQlrllSQRH--ELQGQIAAHNQQIIQYQQQIEQRQQqlltALAGYALT 656
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 528 AKEKQAQLAQTLQQQEQASQGLRHQVEQlsSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEE-REA-----SLRERDA 601
Cdd:PRK10246 657 LPQEDEEASWLATRQQEAQSWQQRQNEL--TALQNRIQQLTPLLETLPQSDDLPHSEETVALDNwRQVheqclSLHSQLQ 734
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 602 ALKQLEALEKEKAAKleiLQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAElelQLR 681
Cdd:PRK10246 735 TLQQQDVLEAQRLQK---AQAQFDTALQASVFDDQQAFLAALLDEETLTQLEQLKQNLENQRQQAQTLVTQTAQ---ALA 808
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217283087 682 SEQQKATEKERVAQEKDQLQEQLQALKESLK---VTKGSLEEEKRRAADALEEQQRCISELKAETR 744
Cdd:PRK10246 809 QHQQHRPDGLDLTVTVEQIQQELAQLAQQLRentTRQGEIRQQLKQDADNRQQQQALMQQIAQATQ 874
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1468-1674 |
2.80e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1468 ELDQAREKYVQELAavRADAETRLAEVQREAQSTARELEVmtAKYEGAKVKVLEERQRF---QEERQKLTAQVEELSKKL 1544
Cdd:COG4913 236 DLERAHEALEDARE--QIELLEPIRELAERYAAARERLAE--LEYLRAALRLWFAQRRLellEAELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1545 ADSDQASKVQQQKLKAVQAQ-GGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAkkqqnqelqeQLRS 1623
Cdd:COG4913 312 ERLEARLDALREELDELEAQiRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPA----------SAEE 381
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 1624 LEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTcrhLTAQVRSLEAQVA 1674
Cdd:COG4913 382 FAALRAEAAALLEALEEELEALEEALAEAEAALRD---LRRELRELEAEIA 429
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
196-452 |
3.00e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 196 FLSGSPASPMGDILQTPQFQMRRLKKQLADERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLAllnekqaasplep 275
Cdd:COG4942 9 LLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALE------------- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 276 KELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEW 355
Cdd:COG4942 76 QELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 356 LEKQAQLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGevlgdvlQLETLKQEAATLAANNTQLQAR 435
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEK-------ELAELAAELAELQQEAEELEAL 228
|
250
....*....|....*..
gi 2217283087 436 VEMLETERGQQEAKLLA 452
Cdd:COG4942 229 IARLEAEAAAAAERTPA 245
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1456-1648 |
3.02e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1456 ERANLGRQFLEVELDQAREKYVQELAAVRA-DAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEERQKLT 1534
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEEAEAALEEfRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLG 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1535 AQVEELSKKLADSDQASKVQQ-----QKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAehyklqMEKAKTHYDA 1609
Cdd:COG3206 251 SGPDALPELLQSPVIQQLRAQlaeleAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRI------LASLEAELEA 324
|
170 180 190
....*....|....*....|....*....|....*....
gi 2217283087 1610 KKQQNQELQEQLRSLEQLQKENKELRAEAERLGHELQQA 1648
Cdd:COG3206 325 LQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVA 363
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
660-977 |
3.02e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.88 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 660 ETARQEQHEAQAQVAELELQlRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISEL 739
Cdd:pfam17380 269 EFLNQLLHIVQHQKAVSERQ-QQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 740 KAETRSLVEQHKRERKELEEERAGRKGLEAR-LQQLGEAHQAETEVLRRELaEAMAAQHTAESECEQLVKEVAAWRERYE 818
Cdd:pfam17380 348 RELERIRQEERKRELERIRQEEIAMEISRMReLERLQMERQQKNERVRQEL-EAARKVKILEEERQRKIQQQKVEMEQIR 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 819 dSQQEEAQygamfQEQLMTLKEECEKARQELQEAKekvagIESHSELQISRQQNELAelhanlaRALQQVQEKEVRAQKL 898
Cdd:pfam17380 427 -AEQEEAR-----QREVRRLEEERAREMERVRLEE-----QERQQQVERLRQQEEER-------KRKKLELEKEKRDRKR 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 899 ADDL------STLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQPEWLEE-----QQGRQFCSTQAAL 967
Cdd:pfam17380 489 AEEQrrkileKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEErrriqEQMRKATEERSRL 568
|
330
....*....|
gi 2217283087 968 QAMEREAEQM 977
Cdd:pfam17380 569 EAMEREREMM 578
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
572-749 |
3.23e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 572 EKQEATRQDHAQQLATAAEEREASLRER-DAALKQLEALEKEKaaKLEILQQQLQVANEARDSAQTSVTQAQREKAELSR 650
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKElEEAEAALEEFRQKN--GLVDLSEEAKLLLQQLSELESQLAEARAELAEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 651 KVEELQACVETARQEQHEA---------QAQVAELELQLRSEQQKATEKERVAQekdQLQEQLQALKESLKVTKGSLEEE 721
Cdd:COG3206 241 RLAALRAQLGSGPDALPELlqspviqqlRAQLAELEAELAELSARYTPNHPDVI---ALRAQIAALRAQLQQEAQRILAS 317
|
170 180
....*....|....*....|....*...
gi 2217283087 722 KRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG3206 318 LEAELEALQAREASLQAQLAQLEARLAE 345
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
815-1037 |
3.58e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 3.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 815 ERYEDSQQEEAQYGAMF-QEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQneLAELHANLARALQQVQEKEV 893
Cdd:COG3206 163 EQNLELRREEARKALEFlEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQ--LSELESQLAEARAELAEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 894 RAQKLADDLSTLQEKMAATSKevarlETLVRKAGEQQETASRELVKEPARAGDRQPE-------------WLEEQQGRQF 960
Cdd:COG3206 241 RLAALRAQLGSGPDALPELLQ-----SPVIQQLRAQLAELEAELAELSARYTPNHPDvialraqiaalraQLQQEAQRIL 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217283087 961 CSTQAALQAMEREAEQMGNELERLRAALMEsqgqqqeeRGQQEREVARLTQERGRAQA--DLALEKAARAELEMRLQNA 1037
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQLEARLAE--------LPELEAELRRLEREVEVARElyESLLQRLEEARLAEALTVG 386
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
894-1131 |
3.66e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 894 RAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVkeparagdrqpewleeQQGRQFCSTQAALQAMERE 973
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIA----------------ALARRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 974 AEQMGNELERLRAALmESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALA 1053
Cdd:COG4942 85 LAELEKEIAELRAEL-EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 1054 HALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSK 1131
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
565-827 |
3.76e-04 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 45.45 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 565 QQLK----EVAEKQEATRQdhaQQlataaeereaslRERDAALKQLEALEKEKAA---KLEILQQQLQVANEARDSAQTS 637
Cdd:PRK11637 47 DQLKsiqqDIAAKEKSVRQ---QQ------------QQRASLLAQLKKQEEAISQasrKLRETQNTLNQLNKQIDELNAS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 638 VTQAQREKAELSRKveeLQACVETA-RQEQHEAqaqvaeLELQLRSEQQKatEKERVAQEKDQLQEQLQALKESLKVTKG 716
Cdd:PRK11637 112 IAKLEQQQAAQERL---LAAQLDAAfRQGEHTG------LQLILSGEESQ--RGERILAYFGYLNQARQETIAELKQTRE 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 717 SLEEEKRRAADALEEQQRCISELKAETRSLveqhkrerkelEEERAGRK----GLEARL----QQLGEAHQAETEvLRRE 788
Cdd:PRK11637 181 ELAAQKAELEEKQSQQKTLLYEQQAQQQKL-----------EQARNERKktltGLESSLqkdqQQLSELRANESR-LRDS 248
|
250 260 270
....*....|....*....|....*....|....*....
gi 2217283087 789 LAEAMAAqhtAESECEQLVKEVAAWRERYEDSQQEEAQY 827
Cdd:PRK11637 249 IARAERE---AKARAEREAREAARVRDKQKQAKRKGSTY 284
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1231-1641 |
4.05e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1231 EEEVSILNRQVLEKEGESKELKRLVMAE-------SEKSQKLEERLRLLQAETASNSARAAERSSALR---------EEV 1294
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQLAAEqyrlvemARELAELNEAESDLEQDYQAASDHLNLVQTALRqqekieryqADL 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1295 QSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFFQKEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQ 1374
Cdd:PRK04863 358 EELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERAKQLCGLPDLTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1375 AAAEKRHREELEQSKQAAGGLRAellraqrelgelipLRQKVAEQERTAQQlraekasYAEQLSMLKKAHGLLaeenrgl 1454
Cdd:PRK04863 438 DNAEDWLEEFQAKEQEATEELLS--------------LEQKLSVAQAAHSQ-------FEQAYQLVRKIAGEV------- 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1455 gERANLGRQFLEVELDQAREKYvqeLAAVRADAETRLAEVQREAQSTaRELEVMTAKYEGAKVKVLEERQRFQEERQKLT 1534
Cdd:PRK04863 490 -SRSEAWDVARELLRRLREQRH---LAEQLQQLRMRLSELEQRLRQQ-QRAERLLAEFCKRLGKNLDDEDELEQLQEELE 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1535 AQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQR---LQAQLNELQAQLSQKEQAAEHYKLQMekakthydakk 1611
Cdd:PRK04863 565 ARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAwlaAQDALARLREQSGEEFEDSQDVTEYM----------- 633
|
410 420 430
....*....|....*....|....*....|....
gi 2217283087 1612 qqnQELQEQLRSL----EQLQKENKELRAEAERL 1641
Cdd:PRK04863 634 ---QQLLERERELtverDELAARKQALDEEIERL 664
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
496-692 |
4.18e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.96 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 496 LTAQVASLTSELTTLNATIQQQDQELaGLKQQAKekqaqlaqtlqqqeqasQGLRHQVEQLSSSLKQKEQqlkEVAEKQE 575
Cdd:PRK09039 44 LSREISGKDSALDRLNSQIAELADLL-SLERQGN-----------------QDLQDSVANLRASLSAAEA---ERSRLQA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 576 ATrqDHAQQLATAAEEREASLrerDAALKQLEALEKEKAAKLEILQQQLqvaneardsaqtsvtqaqrekAELSRKVEEL 655
Cdd:PRK09039 103 LL--AELAGAGAAAEGRAGEL---AQELDSEKQVSARALAQVELLNQQI---------------------AALRRQLAAL 156
|
170 180 190
....*....|....*....|....*....|....*...
gi 2217283087 656 QACVETARQEQHEAQAQVAELELQLRSE-QQKATEKER 692
Cdd:PRK09039 157 EAALDASEKRDRESQAKIADLGRRLNVAlAQRVQELNR 194
|
|
| PTZ00491 |
PTZ00491 |
major vault protein; Provisional |
620-739 |
4.50e-04 |
|
major vault protein; Provisional
Pssm-ID: 240439 [Multi-domain] Cd Length: 850 Bit Score: 45.39 E-value: 4.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 620 LQQQLQVANEARDSAQTSVTQ------AQREKAELSRKVEELQACVETARQEQHEAQAQVAELEL--QLRSEQQKATEKE 691
Cdd:PTZ00491 649 LQKSVQLAIEITTKSQEAAARhqaellEQEARGRLERQKMHDKAKAEEQRTKLLELQAESAAVESsgQSRAEALAEAEAR 728
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2217283087 692 RVAQEKDQLQEQLQAlkESLKVTKGSLEEEKRRAADALEEQQRCISEL 739
Cdd:PTZ00491 729 LIEAEAEVEQAELRA--KALRIEAEAELEKLRKRQELELEYEQAQNEL 774
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1750-2020 |
4.55e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 4.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1750 PDGTSVPGEPASPISQRlPPKVESLESLYFTPIPARSQA--PLESSLDSLGDVFLDSGRKTRSARRRTTQIINITMTKKL 1827
Cdd:PHA03307 192 EPPPSTPPAAASPRPPR-RSSPISASASSPAPAPGRSAAddAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIW 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1828 DVEEPDsaNSSFYSTRSAPASQASLRATSSTQSLARLGSPDYGNSALLSLPGYRP-----TTRSSARRSQAGVSSGAPPG 1902
Cdd:PHA03307 271 EASGWN--GPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSREsssssTSSSSESSRGAAVSPGPSPS 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1903 RNsfymGTCQDEPeqldDWNRIAELQQRnrvCPPHLKTCYPLESRPSlslgtitdeemktgdpqETLRRASMQ---PIQI 1979
Cdd:PHA03307 349 RS----PSPSRPP----PPADPSSPRKR---PRPSRAPSSPAASAGR-----------------PTRRRARAAvagRARR 400
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2217283087 1980 AEGTGITTRQQRKRVSLEPHQGPGTPESKkatscfPRPMTP 2020
Cdd:PHA03307 401 RDATGRFPAGRPRPSPLDAGAASGAFYAR------YPLLTP 435
|
|
| COG4995 |
COG4995 |
Uncharacterized conserved protein, contains CHAT domain [Function unknown]; |
510-947 |
5.10e-04 |
|
Uncharacterized conserved protein, contains CHAT domain [Function unknown];
Pssm-ID: 444019 [Multi-domain] Cd Length: 711 Bit Score: 45.34 E-value: 5.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 510 LNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAA 589
Cdd:COG4995 2 LALALLALLAALLAALALALLALALLLLLAALAAAALLLLALLALLLALAAAAAAALAAAALALALLAAAALALLLLALA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 590 EEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEA 669
Cdd:COG4995 82 LAALALALLAAALALALAAAALAALALLAALLALAAAAALLALLAALALLALLAALAAALAAAAAAALAAALAAAAAAAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 670 QAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQ 749
Cdd:COG4995 162 AAALLALALALAAAALALLALLLAALAAALAAAAAALALLLALLLLAALAAALAAALAALLLALLALAAALLALLLLALL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 750 HKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGA 829
Cdd:COG4995 242 ALAAAAAALAAAAAALLALAAALLLLAALAALAAAAAAAALAALALAAALALAAAALALALLLAAAAAAALAALALLLLA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 830 MFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQN-----ELAELHANLARALQQVQEKEVRAQKLADDLST 904
Cdd:COG4995 322 ALLLLLAALALLALLLLLAAAALLAAALAAALALAAALALALLaalllLLAALLALLLEALLLLLLALLAALLLLAAALL 401
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2217283087 905 LQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDR 947
Cdd:COG4995 402 ALAAAQLLRLLLAALALLLALAAYAAARLALLALIEYIILPDR 444
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1515-1705 |
5.10e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 5.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1515 AKVKVLEERQRFQEERQKLTAQVEELskKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAE 1594
Cdd:COG4913 249 EQIELLEPIRELAERYAAARERLAEL--EYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELD 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1595 HYKLQMEKAKThydakkqqnQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTcrhLTAQVRSLEAQVA 1674
Cdd:COG4913 327 ELEAQIRGNGG---------DRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEE---FAALRAEAAALLE 394
|
170 180 190
....*....|....*....|....*....|.
gi 2217283087 1675 HADQQLRDLgkfQVATDALKSREPQAKPQLD 1705
Cdd:COG4913 395 ALEEELEAL---EEALAEAEAALRDLRRELR 422
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
340-791 |
6.02e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.33 E-value: 6.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 340 ALNELTEEHSKATQEWLEKQAQLEKELSAALQDKKCLEEKNE---ILQGKLSQLEEHLSQLQDNppqekgevlgdVLQLE 416
Cdd:PRK04863 280 ERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEaesDLEQDYQAASDHLNLVQTA-----------LRQQE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 417 TLKQEAATLAANNTQLQARVEMLETERGQQEAKllaerghfEEEKQQLSSLITDLQSSISNLSQAKEELE-------QAS 489
Cdd:PRK04863 349 KIERYQADLEELEERLEEQNEVVEEADEQQEEN--------EARAEAAEEEVDELKSQLADYQQALDVQQtraiqyqQAV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 490 QA-HGARLTAQVASLTSE-----LTTLNATIQQQDQELAGLKQQakekqaqlaqtlqqqeqasqglrhqveqLSSS---L 560
Cdd:PRK04863 421 QAlERAKQLCGLPDLTADnaedwLEEFQAKEQEATEELLSLEQK----------------------------LSVAqaaH 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 561 KQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEAlekeKAAKLEILQQQLQVANEARDSAQTSVTQ 640
Cdd:PRK04863 473 SQFEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQRHLAEQLQQLRM----RLSELEQRLRQQQRAERLLAEFCKRLGK 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 641 AQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKEslkvtkgslee 720
Cdd:PRK04863 549 NLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLRE----------- 617
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 721 ekrRAADALEEQQRCISELKAetrsLVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRReLAE 791
Cdd:PRK04863 618 ---QSGEEFEDSQDVTEYMQQ----LLERERELTVERDELAARKQALDEEIERLSQPGGSEDPRLNA-LAE 680
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
884-1595 |
6.02e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 6.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 884 ALQQVQEKEVRAQKLADDLSTLQE---KMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQPEWLEEQQGRQF 960
Cdd:pfam12128 232 AIAGIMKIRPEFTKLQQEFNTLESaelRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELS 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 961 cSTQAALQAMEREAEQMGnelERLRAALMESQGQQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNE 1040
Cdd:pfam12128 312 -AADAAVAKDRSELEALE---DQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1041 QRVEFATLQEALAhalTEKEGKDQELAKLRGLEAAQIKEL-EELRQTVKQLKEQlAKKEKEHASGSGAQSEAAGRTEPTG 1119
Cdd:pfam12128 388 NNRDIAGIKDKLA---KIREARDRQLAVAEDDLQALESELrEQLEAGKLEFNEE-EYRLKSRLGELKLRLNQATATPELL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1120 PKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAF-RTK 1198
Cdd:pfam12128 464 LQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFlRKE 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1199 VQDhskaedeWKAQVAR--GRQEAERKNSLISSLEEEVSilnrQVLEKEGESKELKRLVMAESEKSQKlEERLRLLQAET 1276
Cdd:pfam12128 544 APD-------WEQSIGKviSPELLHRTDLDPEVWDGSVG----GELNLYGVKLDLKRIDVPEWAASEE-ELRERLDKAEE 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1277 ASNSARaaERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELGQELKAWQEKFfqkeqalstlqlehtsTQAL 1356
Cdd:pfam12128 612 ALQSAR--EKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKK----------------NKAL 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1357 VSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQRELGEliplrQKVAEQERTAQQLRAEKASYAEQ 1436
Cdd:pfam12128 674 AERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEG-----ALDAQLALLKAAIAARRSGAKAE 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1437 LSMLKKahgllaEENRGLGERAnlgrqfleveldqAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYegak 1516
Cdd:pfam12128 749 LKALET------WYKRDLASLG-------------VDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETW---- 805
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217283087 1517 vkvLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLkavQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEH 1595
Cdd:pfam12128 806 ---LQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKL---EMERKASEKQQVRLSENLRGLRCEMSKLATLKED 878
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
1555-1683 |
6.54e-04 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 44.27 E-value: 6.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1555 QQKLKAVQAQGGESQQEAQRLQAQLnELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLEQLQKENKEL 1634
Cdd:COG1566 82 QAALAQAEAQLAAAEAQLARLEAEL-GAEAEIAAAEAQLAAAQAQLDLAQRELERYQALYKKGAVSQQELDEARAALDAA 160
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2217283087 1635 RAEAERLGHELQQAGLKTKEAEQTcRHLTAQVRSLEAQVAHADQQLRDL 1683
Cdd:COG1566 161 QAQLEAAQAQLAQAQAGLREEEEL-AAAQAQVAQAEAALAQAELNLART 208
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
700-1201 |
6.67e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 6.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 700 LQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLGEAHQ 779
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 780 AETEVLRRELAEAMAAQhtAESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGI 859
Cdd:COG4717 127 LLPLYQELEALEAELAE--LPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 860 EShselQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAAtskeVARLETLVRKAGEQQETASRELVK 939
Cdd:COG4717 205 QQ----RLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLL----LIAAALLALLGLGGSLLSLILTIA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 940 EPARAGDRQPEWLEEQQGRQFCSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQEREVARLtqergrAQAD 1019
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRI------EELQ 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1020 LALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKegkdqelaklrgleAAQIKELEELRQTVKQLKEQLAKKEK 1099
Cdd:COG4717 351 ELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAA--------------LEQAEEYQELKEELEELEEQLEELLG 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1100 EHASGSGAQSEAAGRTEptgpkLEALRAEVSKLEQQCQKQQEQADSLERSLeaERASRAERDSALETLQGQLEEKAQELG 1179
Cdd:COG4717 417 ELEELLEALDEEELEEE-----LEELEEELEELEEELEELREELAELEAEL--EQLEEDGELAELLQELEELKAELRELA 489
|
490 500
....*....|....*....|..
gi 2217283087 1180 HSQSALASAQRELAAFRTKVQD 1201
Cdd:COG4717 490 EEWAALKLALELLEEAREEYRE 511
|
|
| DUF1633 |
pfam07794 |
Protein of unknown function (DUF1633); This family contains sequences derived from a group of ... |
556-738 |
7.15e-04 |
|
Protein of unknown function (DUF1633); This family contains sequences derived from a group of hypothetical proteins expressed by Arabidopsis thaliana. These sequences are highly similar and the region concerned is about 100 residues long.
Pssm-ID: 116408 [Multi-domain] Cd Length: 698 Bit Score: 44.88 E-value: 7.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 556 LSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQ 635
Cdd:pfam07794 446 LRASAKEGEEGERAIREEDPHLGADQDREVRFGAEGIVPGIERLKIELSTSKDLEKGYAEKIGFMEMEFGGLEADKQMAR 525
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 636 TSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRS--EQQKATEKERVAQEkDQLQEQLQALKESLKV 713
Cdd:pfam07794 526 NQIHRLEEKKDELSKKVLDLTSIAQGAKKAVHDAKVELAAAYLKLLAgiKDKWVAKKEFTVLE-GQAAEVESNLALIDQI 604
|
170 180
....*....|....*....|....*...
gi 2217283087 714 TKGSLE---EEKRRAADALEEQQRCISE 738
Cdd:pfam07794 605 TKAAIDltlEKPRFQAEIDDLEARCKLK 632
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
326-607 |
7.34e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 7.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 326 KLREFASHLQQLQDALNELTEEHSKATQEwlEKQAQLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQek 405
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAE--LDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDD-- 686
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 406 gevlgdvlqLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLlaerghfEEEKQQLSSLITDLQSSISNLSQAKEEL 485
Cdd:COG4913 687 ---------LAALEEQLEELEAELEELEEELDELKGEIGRLEKEL-------EQAEEELDELQDRLEAAEDLARLELRAL 750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 486 --EQASQAHGARLTAQV-ASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSS-LK 561
Cdd:COG4913 751 leERFAAALGDAVERELrENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDgLP 830
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2217283087 562 QKEQQLKEVAEKQEATRQDH-AQQLATAAEEREASLRERDAALKQLE 607
Cdd:COG4913 831 EYEERFKELLNENSIEFVADlLSKLRRAIREIKERIDPLNDSLKRIP 877
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
326-700 |
7.43e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 7.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 326 KLREFASHLQQLQDALNELTEEHSKAT------QEWLEKQAQLEKELSAALQDKKCLEEKNEIL---QGKLSQLEEHLSQ 396
Cdd:PRK04863 308 RLVEMARELAELNEAESDLEQDYQAASdhlnlvQTALRQQEKIERYQADLEELEERLEEQNEVVeeaDEQQEENEARAEA 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 397 LQDNPPQEKGEvLGDVLQLETLKQEAATlaanntQLQARVEMLETERGQQEAKLLAERG------HFEEEKQQLSSLITD 470
Cdd:PRK04863 388 AEEEVDELKSQ-LADYQQALDVQQTRAI------QYQQAVQALERAKQLCGLPDLTADNaedwleEFQAKEQEATEELLS 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 471 LQSSISNLSQAKEELEQASQ---AHGARLTAQVASLTS-ELTTLNATIQQQDQELAGLKQQAKEkqaqlAQTLQQQEQAS 546
Cdd:PRK04863 461 LEQKLSVAQAAHSQFEQAYQlvrKIAGEVSRSEAWDVArELLRRLREQRHLAEQLQQLRMRLSE-----LEQRLRQQQRA 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 547 QGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRErdaaLKQLEAlekeKAAKLEILQQQLQV 626
Cdd:PRK04863 536 ERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQ----LEQLQA----RIQRLAARAPAWLA 607
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 627 ANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKAT-EKERVAQEKDQL 700
Cdd:PRK04863 608 AQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDEEIERLSQPGGsEDPRLNALAERF 682
|
|
| YqiK |
COG2268 |
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; |
563-712 |
7.78e-04 |
|
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 44.48 E-value: 7.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 563 KEQQLKEVAEKQEATRQDHAQQLATAAEEREAslRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQtsvtQAQ 642
Cdd:COG2268 198 IRDARIAEAEAERETEIAIAQANREAEEAELE--QEREIETARIAEAEAELAKKKAEERREAETARAEAEAAY----EIA 271
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 643 REKAELsrkveELQACVETARQEQheaQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLK 712
Cdd:COG2268 272 EANAER-----EVQRQLEIAERER---EIELQEKEAEREEAELEADVRKPAEAEKQAAEAEAEAEAEAIR 333
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
1007-1530 |
7.79e-04 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 44.85 E-value: 7.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1007 ARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQT 1086
Cdd:COG3899 732 LELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALLERALAARALAALAALRHGNPPASARAYANLGLLLLGDYEEAYE 811
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1087 VKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEvskLEQQCQKQQEQADSLERSLEAERASRAERDSALET 1166
Cdd:COG3899 812 FGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELL---REALEAGLETGDAALALLALAAAAAAAAAAAALAA 888
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1167 LQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEG 1246
Cdd:COG3899 889 AAAAAARLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAA 968
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1247 ESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQELTSQAERAEELG 1326
Cdd:COG3899 969 AAALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALALLAA 1048
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1327 QELkawqekffqkEQALSTLQLEHTSTQALVSELLPAKHLCQQLQAEQAAAEKRHREELEQSKQAAGGLRAELLRAQREL 1406
Cdd:COG3899 1049 LAA----------AAAAAAAAAALAAAAALLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALAALALAA 1118
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1407 GELIPLRQKVAEQERTAQQLRAEKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFLEVELDQAREKYVQELAAVRAD 1486
Cdd:COG3899 1119 ALAALALAAAARAAAALLLLAAALALALAALLLLAALLLALALLLLALAALALAAALAALAAALLAAAAAAAAAAALLAA 1198
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 2217283087 1487 AETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRFQEER 1530
Cdd:COG3899 1199 LLALAARLAALLALALLALEAAALLLLLLLAALALAAALLALRL 1242
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1181-1574 |
1.17e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 44.27 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1181 SQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEA-----ERKNSLISSLEEEVSILNRQVLekegeSKELKRLV 1255
Cdd:PRK10929 14 SWGAYAATAPDEKQITQELEQAKAAKTPAQAEIVEALQSAlnwleERKGSLERAKQYQQVIDNFPKL-----SAELRQQL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1256 MAESEKSQKLEERL-------RLLQAetasnsaraaerSSALREEVQSLREEAEKQRVASENLRQ--ELTSQAERA-EEL 1325
Cdd:PRK10929 89 NNERDEPRSVPPNMstdaleqEILQV------------SSQLLEKSRQAQQEQDRAREISDSLSQlpQQQTEARRQlNEI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1326 GQELKAWQEKFFQKEQALST-LQLEHTSTQALVSELlpakhlcqqlqaeqaaaekrhreELEQ----SKQAAGGLRAELL 1400
Cdd:PRK10929 157 ERRLQTLGTPNTPLAQAQLTaLQAESAALKALVDEL-----------------------ELAQlsanNRQELARLRSELA 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1401 --RAQRELGELIPLRQKVAEQertaQQLRAEKASYAEQLsmlkkahglLAEENRGLGEraNLGRQF-LEVELDQAREKYV 1477
Cdd:PRK10929 214 kkRSQQLDAYLQALRNQLNSQ----RQREAERALESTEL---------LAEQSGDLPK--SIVAQFkINRELSQALNQQA 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1478 QELAAVRADAETRLAEVQ--REAQSTARE----LEVMTAKYEG--AKVKVLEERQRFQE---ERQKLTAQ---VEELSKK 1543
Cdd:PRK10929 279 QRMDLIASQQRQAASQTLqvRQALNTLREqsqwLGVSNALGEAlrAQVARLPEMPKPQQldtEMAQLRVQrlrYEDLLNK 358
|
410 420 430
....*....|....*....|....*....|.
gi 2217283087 1544 LADSDQASKVQQQKLKAVQAQGGESQQEAQR 1574
Cdd:PRK10929 359 QPQLRQIRQADGQPLTAEQNRILDAQLRTQR 389
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1078-1347 |
1.19e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.52 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1078 KELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEptgpKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASR 1157
Cdd:pfam19220 38 AILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTR----RLSAAEGELEELVARLAKLEAALREAEAAKEELRIEL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1158 AERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERKNSLISSLEEEVSIL 1237
Cdd:pfam19220 114 RDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAEL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1238 NRQVLEKEGESK-ELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSA-----------------LREEVQSLRE 1299
Cdd:pfam19220 194 TRRLAELETQLDaTRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERASLrmklealtaraaateqlLAEARNQLRD 273
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 1300 EAEKQRVASENLRQ---ELTSQAERAEELGQELKAWQEKFFQKEQALSTLQ 1347
Cdd:pfam19220 274 RDEAIRAAERRLKEasiERDTLERRLAGLEADLERRTQQFQEMQRARAELE 324
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
575-748 |
1.40e-03 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 43.45 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 575 EATRQDHAQQLATAAEEREASLRERDAALKQLEALEKE---KAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRK 651
Cdd:pfam05262 184 EALREDNEKGVNFRRDMTDLKERESQEDAKRAQQLKEEldkKQIDADKAQQKADFAQDNADKQRDEVRQKQQEAKNLPKP 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 652 veelqACVETARQEQHEAQAQVAELElqlRSEQQKATEKERVAQEKDQLQEQL-QALKESLKVTKGSLEEEKRRAADALE 730
Cdd:pfam05262 264 -----ADTSSPKEDKQVAENQKREIE---KAQIEIKKNDEEALKAKDHKAFDLkQESKASEKEAEDKELEAQKKREPVAE 335
|
170
....*....|....*...
gi 2217283087 731 EQQRCISELKAETRSLVE 748
Cdd:pfam05262 336 DLQKTKPQVEAQPTSLNE 353
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
304-408 |
1.61e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 43.53 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 304 TEKSQMDRKINQLSEENGDLSfKLREFAS--HLQQLQDALNELTEEHSKATQEWLEkqaqlEKELSAALQD-KKCLEEKN 380
Cdd:COG0542 411 EELDELERRLEQLEIEKEALK-KEQDEASfeRLAELRDELAELEEELEALKARWEA-----EKELIEEIQElKEELEQRY 484
|
90 100
....*....|....*....|....*...
gi 2217283087 381 EILQGKLSQLEEHLSQLQDNPPQEKGEV 408
Cdd:COG0542 485 GKIPELEKELAELEEELAELAPLLREEV 512
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
259-625 |
1.61e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 43.35 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 259 DRLALLNEKQAASPLEPKELEELRDKNESLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQ 338
Cdd:pfam07888 42 ERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 339 DA-------LNELTEEHSKATQEWLEKQAQLEK---ELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEV 408
Cdd:pfam07888 122 AQraahearIRELEEDIKTLTQRVLERETELERmkeRAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 409 LGDVLQLETLKQEAATLAANNTQLQARVemLETERGQQEAKLLAERGHFEEEKQQLssLITDLQSSISNLSQAKEELEQA 488
Cdd:pfam07888 202 AQRDTQVLQLQDTITTLTQKLTTAHRKE--AENEALLEELRSLQERLNASERKVEG--LGEELSSMAAQRDRTQAELHQA 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 489 sQAHGARLTAQVASLTSELTTLNATIQQQDQELaglkQQAKEKQaqlaqtlqqqeqasqglRHQVEQLSSSLKQKEQQLK 568
Cdd:pfam07888 278 -RLQAAQLTLQLADASLALREGRARWAQERETL----QQSAEAD-----------------KDRIEKLSAELQRLEERLQ 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 569 EVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQ 625
Cdd:pfam07888 336 EERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLE 392
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
914-1335 |
1.63e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 914 KEVARLETLVRKAGEQQETASRELVKEPARAGDRQPEWLEEQQGRQfcSTQAALQAMEREAEQMGNELERLRAALmeSQG 993
Cdd:COG4717 53 KEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELE--ELEEELEELEAELEELREELEKLEKLL--QLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 994 QQQEERGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLE 1073
Cdd:COG4717 129 PLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1074 AAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGR--------------TEPTGPKLEALRAEVSKLEQQCQKQ 1139
Cdd:COG4717 209 AELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARlllliaaallallgLGGSLLSLILTIAGVLFLVLGLLAL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1140 QEQADSLERSLEAERASRAERDSALETLQGQ-LEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQ 1218
Cdd:COG4717 289 LFLLLAREKASLGKEAEELQALPALEELEEEeLEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEEL 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1219 EAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETAsnsARAAERSSALREEVQSLR 1298
Cdd:COG4717 369 EQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE---EELEEELEELEEELEELE 445
|
410 420 430
....*....|....*....|....*....|....*..
gi 2217283087 1299 EEAEKQRVASENLRQELtSQAERAEELGQELKAWQEK 1335
Cdd:COG4717 446 EELEELREELAELEAEL-EQLEEDGELAELLQELEEL 481
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
593-796 |
1.70e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 593 EASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQE------- 665
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREElgerara 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 666 QHEAQAQVAELELQLRSEQQKATEKERVAQekDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRS 745
Cdd:COG3883 95 LYRSGGSVSYLDVLLGSESFSDFLDRLSAL--SKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 746 LVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQ 796
Cdd:COG3883 173 LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
552-745 |
1.79e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 552 QVEQLSSSLKQKEQQLKEVAEKQEATRQD---HAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVAN 628
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAEleeLNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 629 EARDSA--------QTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQL 700
Cdd:COG3883 97 RSGGSVsyldvllgSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2217283087 701 QEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRS 745
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
471-734 |
1.79e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 43.50 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 471 LQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNAT------IQQQDQEL-------AGLKQQAKEKqaQLAQ 537
Cdd:PRK10929 18 YAATAPDEKQITQELEQAKAAKTPAQAEIVEALQSALNWLEERkgslerAKQYQQVIdnfpklsAELRQQLNNE--RDEP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 538 TLQQQEQASQGLRHQVEQLSSSLKQKEQQLkevaeKQEatrQDHAQQLATaaeereaslrerdaALKQLEALEKEKAAKL 617
Cdd:PRK10929 96 RSVPPNMSTDALEQEILQVSSQLLEKSRQA-----QQE---QDRAREISD--------------SLSQLPQQQTEARRQL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 618 EILQQQLQVANEARDS-AQTSVTQAQREKAELSRKVEELQACVETA--RQE------------QHEAQAQVAELELQLRS 682
Cdd:PRK10929 154 NEIERRLQTLGTPNTPlAQAQLTALQAESAALKALVDELELAQLSAnnRQElarlrselakkrSQQLDAYLQALRNQLNS 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 683 EQQKATEK--ERVAQEKDQLQEQLQALKESLKVTK---GSLEEEKRRaADALEEQQR 734
Cdd:PRK10929 234 QRQREAERalESTELLAEQSGDLPKSIVAQFKINRelsQALNQQAQR-MDLIASQQR 289
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
773-1335 |
2.05e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.13 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 773 QLGEAHQAETEVLRR--ELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEA---QYGAMFQEQLMTLKEECEKARQ 847
Cdd:PRK03918 194 LIKEKEKELEEVLREinEISSELPELREELEKLEKEVKELEELKEEIEELEKELEsleGSKRKLEEKIRELEERIEELKK 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 848 ELQEAKEKVAGIEShselqISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAG 927
Cdd:PRK03918 274 EIEELEEKVKELKE-----LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLK 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 928 EQQETASRelVKEPARAGDRQPEWLEEQQG---RQFCSTQAALQAMEREAEQMGNELERLRAALMESQGQQQEERGQQER 1004
Cdd:PRK03918 349 ELEKRLEE--LEERHELYEEAKAKKEELERlkkRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKK 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1005 EVARLTQERGRAQA-DLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRgleaaQIKELEEL 1083
Cdd:PRK03918 427 AIEELKKAKGKCPVcGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKES-----ELIKLKEL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1084 RQTVKQLKEQLAKKEKEHASgsgaqsEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEqadsLERSLEAERASRAERDSA 1163
Cdd:PRK03918 502 AEQLKELEEKLKKYNLEELE------KKAEEYEKLKEKLIKLKGEIKSLKKELEKLEE----LKKKLAELEKKLDELEEE 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1164 LETLQGQLEEKAQElghSQSALASAQRELAAFRTKVQDHSKAEdewkaqvargrQEAERKNSLISSLEEEVSILNRQVLE 1243
Cdd:PRK03918 572 LAELLKELEELGFE---SVEELEERLKELEPFYNEYLELKDAE-----------KELEREEKELKKLEEELDKAFEELAE 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1244 KEGESKELKRlvmaeseksqKLEERLRLLQAETASNsaraaerssaLREEVQSLREEAEKQRVASENLRQELTSQAERAE 1323
Cdd:PRK03918 638 TEKRLEELRK----------ELEELEKKYSEEEYEE----------LREEYLELSRELAGLRAELEELEKRREEIKKTLE 697
|
570
....*....|..
gi 2217283087 1324 ELGQELKAWQEK 1335
Cdd:PRK03918 698 KLKEELEEREKA 709
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
337-686 |
2.14e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.96 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 337 LQDALNELTEEHSKATQEWLEKQAQLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLE 416
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 417 TLKQEAATLAANNTQLQARVEMLE------TERG-----------QQEAKLLAERGHFEEEKQQLSSlitDLQSSISNLS 479
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEediktlTQRVleretelermkERAKKAGAQRKEEEAERKQLQA---KLQQTEEELR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 480 QAKEELEQASQAHGARLTaQVASLTSELTTLNATIQQQDQELAGLkQQAKEKQAQLAQTLQQQEQASQGLRhqvEQLSSS 559
Cdd:pfam07888 189 SLSKEFQELRNSLAQRDT-QVLQLQDTITTLTQKLTTAHRKEAEN-EALLEELRSLQERLNASERKVEGLG---EELSSM 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 560 LKQKEQQLKEV--AEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVA-NEARDSAQT 636
Cdd:pfam07888 264 AAQRDRTQAELhqARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERlQEERMEREK 343
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 637 SVTQAQREK-------AELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQK 686
Cdd:pfam07888 344 LEVELGREKdcnrvqlSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQR 400
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
594-910 |
2.34e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 594 ASLRERDAALKQLEALEKEkaakLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQV 673
Cdd:COG4372 28 ALSEQLRKALFELDKLQEE----LEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEEL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 674 AELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRE 753
Cdd:COG4372 104 ESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQ 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 754 RKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVAAWRERYEDSQQEEAQYGAMFQE 833
Cdd:COG4372 184 ALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEEL 263
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 834 QLMTLKEECEKARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLSTLQEKMA 910
Cdd:COG4372 264 ELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELA 340
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
603-712 |
2.41e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 42.41 E-value: 2.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 603 LKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQAcvetarQEQHEAQAQVAELELQLrs 682
Cdd:TIGR04320 256 LAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATAQKELANAQA------QALQTAQNNLATAQAAL-- 327
|
90 100 110
....*....|....*....|....*....|.
gi 2217283087 683 eqQKATEKERVAQEK-DQLQEQLQALKESLK 712
Cdd:TIGR04320 328 --ANAEARLAKAKEAlANLNADLAKKQAALD 356
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1045-1319 |
2.80e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1045 FATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEA 1124
Cdd:COG3883 4 LALAAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1125 LRAEVSKLEQQCQKQQEQADSLERSLEAERASRA-ERDSALETLQGQLEEKAQELGHSQSALASAQRELAAfrtKVQDHS 1203
Cdd:COG3883 84 RREELGERARALYRSGGSVSYLDVLLGSESFSDFlDRLSALSKIADADADLLEELKADKAELEAKKAELEA---KLAELE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1204 KAEDEWKAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARA 1283
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 240
|
250 260 270
....*....|....*....|....*....|....*.
gi 2217283087 1284 AERSSALREEVQSLREEAEKQRVASENLRQELTSQA 1319
Cdd:COG3883 241 AAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGA 276
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1183-1704 |
2.99e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.90 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1183 SALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEaerKNSLISSLEEEVsilNRQVLEKEGESKELKRLVMAESEKS 1262
Cdd:pfam12128 251 NTLESAELRLSHLHFGYKSDETLIASRQEERQETSAE---LNQLLRTLDDQW---KEKRDELNGELSAADAAVAKDRSEL 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1263 QKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQRVASENLRQEL-TSQAERAEELGQELKAWQEKFF-QKE 1340
Cdd:pfam12128 325 EALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYnRRRSKIKEQNNRDIAGIKDKLAkIRE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1341 QALSTLQLEHTSTQALVSELlpakhlcqqlQAEQAAAEKRHREELEQSKQAAGGL------------------------- 1395
Cdd:pfam12128 405 ARDRQLAVAEDDLQALESEL----------REQLEAGKLEFNEEEYRLKSRLGELklrlnqatatpelllqlenfderie 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1396 ---------RAELLRAQRELGELIPLRQKVAEQ----ERTAQQLRAEKASYAEQLSmlKKAHGLLA---------EENRG 1453
Cdd:pfam12128 475 rareeqeaaNAEVERLQSELRQARKRRDQASEAlrqaSRRLEERQSALDELELQLF--PQAGTLLHflrkeapdwEQSIG 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1454 -LGERANLGRQFLEVELDQAREKYVQELAAVRADAETrlAEVQREAQSTaRELEVMTAKYEGAKVKVLEERQRFQEERQK 1532
Cdd:pfam12128 553 kVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKR--IDVPEWAASE-EELRERLDKAEEALQSAREKQAAAEEQLVQ 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1533 LTAQVEELSKKLADSDQASKVQQQKLkavQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEK----AKTHYD 1608
Cdd:pfam12128 630 ANGELEKASREETFARTALKNARLDL---RRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKkhqaWLEEQK 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1609 AKKQQNQELQEQLRSLEQLQKENKELRA----EAERLGHELQQAGLKTKEA---------EQTCRHLTAQVRSLEAQVAH 1675
Cdd:pfam12128 707 EQKREARTEKQAYWQVVEGALDAQLALLkaaiAARRSGAKAELKALETWYKrdlaslgvdPDVIAKLKREIRTLERKIER 786
|
570 580
....*....|....*....|....*....
gi 2217283087 1676 ADQQLRDLGKFQvatDALKSREPQAKPQL 1704
Cdd:pfam12128 787 IAVRRQEVLRYF---DWYQETWLQRRPRL 812
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1045-1343 |
3.05e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 3.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1045 FATLQEALAHAL------TEKEGKDQ--ELAKLRGLEAAQIKELEELRQTVKQLkEQLAKKEKEhasgsgaqseaagrte 1116
Cdd:PRK11281 19 LLCLSSAFARAAsngdlpTEADVQAQldALNKQKLLEAEDKLVQQDLEQTLALL-DKIDRQKEE---------------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1117 ptgpkLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSaLETLQGQLEEKAQELGHSQSALASAQRELAAFR 1196
Cdd:PRK11281 82 -----TEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLS-LRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQ 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1197 T---KVQ----DHSKAEDEWKAQVARGRQEAERKN-SLISSLEEEVSILN------RQVLEKEGESKELKRLVMAE-SEK 1261
Cdd:PRK11281 156 TqpeRAQaalyANSQRLQQIRNLLKGGKVGGKALRpSQRVLLQAEQALLNaqndlqRKSLEGNTQLQDLLQKQRDYlTAR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1262 SQKLEERLRLLQaeTASNSARAAErSSALREEVQSLREEAEKQR---VASEN-----LRQELTSQAERAEELGQE---LK 1330
Cdd:PRK11281 236 IQRLEHQLQLLQ--EAINSKRLTL-SEKTVQEAQSQDEAARIQAnplVAQELeinlqLSQRLLKATEKLNTLTQQnlrVK 312
|
330
....*....|...
gi 2217283087 1331 AWQEKFFQKEQAL 1343
Cdd:PRK11281 313 NWLDRLTQSERNI 325
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
494-699 |
3.25e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 494 ARLTAQVASLTSELTTLNATIQQQDQELaglkQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEK 573
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAEL----EELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 574 QEATRQ------------------DHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQ 635
Cdd:COG3883 95 LYRSGGsvsyldvllgsesfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217283087 636 TSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQ 699
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1481-1707 |
3.36e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1481 AAVRADAETRLAEVQREAQSTARELEvmtakyegakvKVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKA 1560
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELA-----------ALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1561 VQAQGGESQQEAQRLQAQLNEL------------------QAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLR 1622
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELlralyrlgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1623 SLEQLQKENKELRAEAERLGHELQQAglkTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDALKSREPQAKP 1702
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEAL---KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
....*
gi 2217283087 1703 QLDLS 1707
Cdd:COG4942 245 AAGFA 249
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
360-734 |
3.38e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.73 E-value: 3.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 360 AQLEKELSAALQDKKCLE-EKNEILQGKLSQLEEHLSQLQ---------DNPPQEKGEVLGdvlQLETLKQEAATLAANN 429
Cdd:PRK10929 26 KQITQELEQAKAAKTPAQaEIVEALQSALNWLEERKGSLErakqyqqviDNFPKLSAELRQ---QLNNERDEPRSVPPNM 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 430 TqlqarVEMLETERGQQEAKLLaERGHFEEEKQQLSSLITDlqsSISNLSQAKEELEQASQAHGARLTAQVASLTSELTT 509
Cdd:PRK10929 103 S-----TDALEQEILQVSSQLL-EKSRQAQQEQDRAREISD---SLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 510 LNATIQQqdqELAGLKQQAKEKqaqlaqtlqqqeqasqglrhQVEQLSSSLKQKEQQLK-EVAEKQEATRQDHAQQLata 588
Cdd:PRK10929 174 QLTALQA---ESAALKALVDEL--------------------ELAQLSANNRQELARLRsELAKKRSQQLDAYLQAL--- 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 589 aEEREASLRERDA--ALKQLEALEKEKAAKLEILQQQLQVAneaRDSAQTSVTQAQREKAELSRKveeLQACVET--ARQ 664
Cdd:PRK10929 228 -RNQLNSQRQREAerALESTELLAEQSGDLPKSIVAQFKIN---RELSQALNQQAQRMDLIASQQ---RQAASQTlqVRQ 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 665 ------EQH----------EA-QAQVAELELQLRSeQQKATE--KERVAQEK-DQLQEQLQALKESLKVTKGSLEEEKRR 724
Cdd:PRK10929 301 alntlrEQSqwlgvsnalgEAlRAQVARLPEMPKP-QQLDTEmaQLRVQRLRyEDLLNKQPQLRQIRQADGQPLTAEQNR 379
|
410
....*....|
gi 2217283087 725 AADALEEQQR 734
Cdd:PRK10929 380 ILDAQLRTQR 389
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
832-1353 |
3.77e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 3.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 832 QEQLMTLKEecekARQELQEAKEKV-------AGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLADDLST 904
Cdd:COG4913 231 VEHFDDLER----AHEALEDAREQIellepirELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 905 LQEKMAATSKEVARLETLVRKAGEQqetasrelvkeparagdrqpewLEEQQGRQfcstqaaLQAMEREAEQMGNELERL 984
Cdd:COG4913 307 LEAELERLEARLDALREELDELEAQ----------------------IRGNGGDR-------LEQLEREIERLERELEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 985 RAALmesqgqqqeerGQQEREVARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQ 1064
Cdd:COG4913 358 ERRR-----------ARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1065 ELAKLRGLEAAQIKELEELRqtvKQLKEQLAKKEKE-------------HASGSGA--------------------QSEA 1111
Cdd:COG4913 427 EIASLERRKSNIPARLLALR---DALAEALGLDEAElpfvgelievrpeEERWRGAiervlggfaltllvppehyaAALR 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1112 AGRTEPTGPKLEALRaeVSKLEQQCQKQQEQADSLERSLE-------------------------------AERA----- 1155
Cdd:COG4913 504 WVNRLHLRGRLVYER--VRTGLPDPERPRLDPDSLAGKLDfkphpfrawleaelgrrfdyvcvdspeelrrHPRAitrag 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1156 ------SRAERD----------------SALETLQGQLEEKAQELGHSQSALASAQRELAAFRT------KVQDHSKAED 1207
Cdd:COG4913 582 qvkgngTRHEKDdrrrirsryvlgfdnrAKLAALEAELAELEEELAEAEERLEALEAELDALQErrealqRLAEYSWDEI 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1208 EWkAQVARGRQEAERKNSLISSLEEEVSILNRQVLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERS 1287
Cdd:COG4913 662 DV-ASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAE 740
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217283087 1288 SALREEvqsLREEAEKQrvasenLRQELTSQAER--AEELGQELKAWQEKFFQKEQALSTLQLEHTST 1353
Cdd:COG4913 741 DLARLE---LRALLEER------FAAALGDAVERelRENLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| YqiK |
COG2268 |
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; |
606-812 |
4.01e-03 |
|
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 42.17 E-value: 4.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 606 LEALEKEKAAklEILQQQLQVANEARDSAQTSVTQAQREK--AELSRKVEelqacVETARQEQHEAQAQVAELELQLRSE 683
Cdd:COG2268 186 LDALGRRKIA--EIIRDARIAEAEAERETEIAIAQANREAeeAELEQERE-----IETARIAEAEAELAKKKAEERREAE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 684 QQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADalEEQQRCISELKAETRSLVEQhkrerkelEEERAG 763
Cdd:COG2268 259 TARAEAEAAYEIAEANAEREVQRQLEIAEREREIELQEKEAERE--EAELEADVRKPAEAEKQAAE--------AEAEAE 328
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2217283087 764 RKGLEARLQQLGEAHQAETEVLrRELAEAMAAQHTAESeCEQLVKEVAA 812
Cdd:COG2268 329 AEAIRAKGLAEAEGKRALAEAW-NKLGDAAILLMLIEK-LPEIAEAAAK 375
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1144-1270 |
4.23e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.38 E-value: 4.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1144 DSLERSLEAERAsraERDSALETLQGQLEEKAQELghsQSALASAQRELAAFRTKVQdhskAEDEWKAQVARGRQEAERK 1223
Cdd:COG0542 414 DELERRLEQLEI---EKEALKKEQDEASFERLAEL---RDELAELEEELEALKARWE----AEKELIEEIQELKEELEQR 483
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 1224 NSLISSLEEEVSILNRQVLEKEGESKE------------------LKRLVMAESEKSQKLEERLR 1270
Cdd:COG0542 484 YGKIPELEKELAELEEELAELAPLLREevteediaevvsrwtgipVGKLLEGEREKLLNLEEELH 548
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1163-1305 |
4.38e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1163 ALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVAR--GRQEAERKNSLISSLEEEVSILNRQ 1240
Cdd:COG1579 25 RLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeEQLGNVRNNKEYEALQKEIESLKRR 104
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 1241 VLEKEGESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQR 1305
Cdd:COG1579 105 ISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1144-1328 |
4.70e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1144 DSLERSLEAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEAERk 1223
Cdd:COG4942 37 AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYR- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1224 NSLISSLEEEVSilNRQVLEKEGESKELKRLVMAESEKSQKLE---ERLRLLQAETASNSARAAERSSALREEVQSLREE 1300
Cdd:COG4942 116 LGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRadlAELAALRAELEAERAELEALLAELEEERAALEAL 193
|
170 180
....*....|....*....|....*...
gi 2217283087 1301 AEKQRVASENLRQELTSQAERAEELGQE 1328
Cdd:COG4942 194 KAERQKLLARLEKELAELAAELAELQQE 221
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1470-1686 |
5.14e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.95 E-value: 5.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1470 DQAREKYVQELAAVRADAETRLAEVQRE----------AQSTARELEVMTAKYEGAkvkvLEERQRFQEERQKLTAQV-- 1537
Cdd:PRK02224 194 AQIEEKEEKDLHERLNGLESELAELDEEieryeeqreqARETRDEADEVLEEHEER----REELETLEAEIEDLRETIae 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1538 -----EELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAkkq 1612
Cdd:PRK02224 270 tererEELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAES--- 346
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217283087 1613 qnqelqeQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGKF 1686
Cdd:PRK02224 347 -------LREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDF 413
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1518-1688 |
5.19e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 5.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1518 KVLEERQRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYK 1597
Cdd:COG4372 7 KVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1598 LQMEKAKTHYDAKKQQ----NQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQV 1673
Cdd:COG4372 87 EQLQAAQAELAQAQEEleslQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEEL 166
|
170
....*....|....*
gi 2217283087 1674 AHADQQLRDLGKFQV 1688
Cdd:COG4372 167 AALEQELQALSEAEA 181
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
508-860 |
5.21e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.80 E-value: 5.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 508 TTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLAT 587
Cdd:pfam07888 30 ELLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 588 A---AEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETAR- 663
Cdd:pfam07888 110 SeelSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRs 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 664 -----QEQHEAQAQVAELELQLRSE----QQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEEQQR 734
Cdd:pfam07888 190 lskefQELRNSLAQRDTQVLQLQDTittlTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDR 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 735 CISEL---KAETRSLVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAESECEQLVKEVA 811
Cdd:pfam07888 270 TQAELhqaRLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQEERMEREKLEVELG 349
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2217283087 812 AWRERYEDSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIE 860
Cdd:pfam07888 350 REKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLE 398
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
564-655 |
5.40e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.86 E-value: 5.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 564 EQQLKEVAEKQEATRQDhAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQR 643
Cdd:PRK11448 141 ENLLHALQQEVLTLKQQ-LELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLEQLQEKAAETSQERKQKRK 219
|
90
....*....|..
gi 2217283087 644 EKAELSRKVEEL 655
Cdd:PRK11448 220 EITDQAAKRLEL 231
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1396-1594 |
5.40e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 5.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1396 RAELLRAQRELGELIP-LRQKVAEQERTAQQLRA---------EKASYAEQLSMLKKAHGLLAEENRGLGERANLGRQFL 1465
Cdd:COG3206 170 REEARKALEFLEEQLPeLRKELEEAEAALEEFRQknglvdlseEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1466 EVELDQARE----KYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKVLEERQRF----QEERQKLTAQV 1537
Cdd:COG3206 250 GSGPDALPEllqsPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRIlaslEAELEALQARE 329
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217283087 1538 EELSKKLADSDQaskvQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAE 1594
Cdd:COG3206 330 ASLQAQLAQLEA----RLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEA 382
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
553-876 |
5.70e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 41.59 E-value: 5.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 553 VEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAkleiLQQQLQVANEARD 632
Cdd:pfam19220 81 AEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKA----LREEAQAAEKALQ 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 633 SAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQK--ATEKERVAQ--EKDQLQEQLQALK 708
Cdd:pfam19220 157 RAEGELATARERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDATRARlrALEGQLAAEqaERERAEAQLEEAV 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 709 ESLKVTKGSLEEEKRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLgeahQAETEVLRRE 788
Cdd:pfam19220 237 EAHRAERASLRMKLEALTARAAATEQLLAEARNQLRDRDEAIRAAERRLKEASIERDTLERRLAGL----EADLERRTQQ 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 789 LAEAMAAQHTAESECEQLVKEVAAwreryEDSQQEEA-QYGAMFQEQLMTLKEECEKARQELQEAKEKVAgieshSELQI 867
Cdd:pfam19220 313 FQEMQRARAELEERAEMLTKALAA-----KDAALERAeERIASLSDRIAELTKRFEVERAALEQANRRLK-----EELQR 382
|
....*....
gi 2217283087 868 SRQQNELAE 876
Cdd:pfam19220 383 ERAERALAQ 391
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1170-1346 |
6.05e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.96 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1170 QLEEKAQELGHSQSAL----ASAQRELAAFRTKVQDHSKAED-EWKAQVARGRQEAERKNSLISSLE-EEVSILNRQvle 1243
Cdd:PRK10929 127 QEQDRAREISDSLSQLpqqqTEARRQLNEIERRLQTLGTPNTpLAQAQLTALQAESAALKALVDELElAQLSANNRQ--- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1244 kegeskELKRLvmaESEKSQKLEERLRLLQAETASN--------SARAAERSSALREEVQSLREEAEKQRVASENLRQEL 1315
Cdd:PRK10929 204 ------ELARL---RSELAKKRSQQLDAYLQALRNQlnsqrqreAERALESTELLAEQSGDLPKSIVAQFKINRELSQAL 274
|
170 180 190
....*....|....*....|....*....|.
gi 2217283087 1316 TSQAERAEELGQELKAWQEKFFQKEQALSTL 1346
Cdd:PRK10929 275 NQQAQRMDLIASQQRQAASQTLQVRQALNTL 305
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
419-531 |
7.18e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 40.87 E-value: 7.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 419 KQEAATLAANNTQLQARVEmletergQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTA 498
Cdd:TIGR04320 246 KTPIPNPPNSLAALQAKLA-------TAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATAQKELANAQAQALQTAQN 318
|
90 100 110
....*....|....*....|....*....|...
gi 2217283087 499 QVASLTSELTTLNATIQQQDQELAGLKQQAKEK 531
Cdd:TIGR04320 319 NLATAQAALANAEARLAKAKEALANLNADLAKK 351
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
1524-1606 |
7.38e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.48 E-value: 7.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1524 QRFQEERQKLTAQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQK--EQAAEHYKLQME 1601
Cdd:PRK11448 145 HALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLEQLQEKAAETsqERKQKRKEITDQ 224
|
....*
gi 2217283087 1602 KAKTH 1606
Cdd:PRK11448 225 AAKRL 229
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
404-562 |
7.44e-03 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 40.87 E-value: 7.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 404 EKGEVLgdvLQLE--TLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGhfeeEKQQLSSLITDLQSSISNLSQA 481
Cdd:pfam00529 43 KAGDVL---FQLDptDYQAALDSAEAQLAKAQAQVARLQAELDRLQALESELAI----SRQDYDGATAQLRAAQAAVKAA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 482 KEELEQA-SQAHGARLTAQV------------ASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQG 548
Cdd:pfam00529 116 QAQLAQAqIDLARRRVLAPIggisreslvtagALVAQAQANLLATVAQLDQIYVQITQSAAENQAEVRSELSGAQLQIAE 195
|
170
....*....|....
gi 2217283087 549 LRHQVEQLSSSLKQ 562
Cdd:pfam00529 196 AEAELKLAKLDLER 209
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
1457-1598 |
7.57e-03 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 40.87 E-value: 7.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1457 RANLGRQFLEVELDQAREKYVQELAAVRADAETRLAEVQREAQSTARELEVMTAKYEGAKVKV---LEERQRFQEERQKL 1533
Cdd:pfam00529 71 QAQVARLQAELDRLQALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRVLApigGISRESLVTAGALV 150
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217283087 1534 TAQVEELSKKLADSDQaskVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKL 1598
Cdd:pfam00529 151 AQAQANLLATVAQLDQ---IYVQITQSAAENQAEVRSELSGAQLQIAEAEAELKLAKLDLERTEI 212
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
653-749 |
7.70e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.48 E-value: 7.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 653 EELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQE----KDQLQEQLQALKE-SLKVTKGSLEEEKRRAAD 727
Cdd:PRK11448 145 HALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAEleekQQELEAQLEQLQEkAAETSQERKQKRKEITDQ 224
|
90 100
....*....|....*....|..
gi 2217283087 728 ALEEQQrcISElkAETRSLVEQ 749
Cdd:PRK11448 225 AAKRLE--LSE--EETRILIDQ 242
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
226-346 |
7.72e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.38 E-value: 7.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 226 ERSNRDELELELAENRKLLTEKDAQIAMMQQRIDRLAllnekqaasplepKELEELRDKNESLTMRLHETLKQCQDLKTE 305
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLE-------------EQVERLEAEVEELEAELEEKDERIERLERE 449
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 306 KSQM----------DRKINQLSEENGDLSFKLREFASHLQQLQDALNELTE 346
Cdd:COG2433 450 LSEArseerreirkDREISRLDREIERLERELEEERERIEELKRKLERLKE 500
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1016-1197 |
7.92e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 7.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1016 AQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQ--TVKQLKEQ 1093
Cdd:COG3206 192 EEAEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQspVIQQLRAQ 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1094 LAKKEKEHAsgsgaqsEAAGRTEPTGPKLEALRAEVSKLEQQCQKQqeqADSLERSLEAERASRAERDSALETLQGQLEE 1173
Cdd:COG3206 272 LAELEAELA-------ELSARYTPNHPDVIALRAQIAALRAQLQQE---AQRILASLEAELEALQAREASLQAQLAQLEA 341
|
170 180
....*....|....*....|....
gi 2217283087 1174 KAQELGHSQSALASAQRELAAFRT 1197
Cdd:COG3206 342 RLAELPELEAELRRLEREVEVARE 365
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1412-1588 |
7.98e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 7.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1412 LRQKVAEQERTAQQLRAEKASYAEQL-------SMLKKAHGLLAEENRGLGERANLGRqfLEVELDQAREKYvQELAAVR 1484
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELeeaeaalEEFRQKNGLVDLSEEAKLLLQQLSE--LESQLAEARAEL-AEAEARL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1485 ADAETRLAEVQREAQSTAR--ELEVMTAKYEGAKVKVLEERQRFQEE---RQKLTAQVEELSKKLADSdqaskvQQQKLK 1559
Cdd:COG3206 243 AALRAQLGSGPDALPELLQspVIQQLRAQLAELEAELAELSARYTPNhpdVIALRAQIAALRAQLQQE------AQRILA 316
|
170 180
....*....|....*....|....*....
gi 2217283087 1560 AVQAQGGESQQEAQRLQAQLNELQAQLSQ 1588
Cdd:COG3206 317 SLEAELEALQAREASLQAQLAQLEARLAE 345
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
559-785 |
8.49e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 559 SLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKE---KAAKLEILQQQLQVANEARDSAQ 635
Cdd:COG4372 14 SLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEEleqARSELEQLEEELEELNEQLQAAQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 636 TSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTK 715
Cdd:COG4372 94 AELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQEL 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217283087 716 GSLEEEK-RRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGRKGLEARLQQLGEAHQAETEVL 785
Cdd:COG4372 174 QALSEAEaEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALEL 244
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
1379-1593 |
8.51e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 41.21 E-value: 8.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1379 KRHREELEQSKQAAGgLRAELLRAQ-RELGELIPlrqKVAEQERTAQQLRaeKASYAEQL-SMLKKAHGLLAEENRGLGE 1456
Cdd:COG0497 171 KKELEELRADEAERA-RELDLLRFQlEELEAAAL---QPGEEEELEEERR--RLSNAEKLrEALQEALEALSGGEGGALD 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1457 RANLGRQFLE--VELDQAREKYVQELAavraDAETRLAEVQREAQSTARELEvmtakYEGAKVKVLEER-QRFQEERQKL 1533
Cdd:COG0497 245 LLGQALRALErlAEYDPSLAELAERLE----SALIELEEAASELRRYLDSLE-----FDPERLEEVEERlALLRRLARKY 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1534 TAQVEELSKKLADSDQaskvQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAA 1593
Cdd:COG0497 316 GVTVEELLAYAEELRA----ELAELENSDERLEELEAELAEAEAELLEAAEKLSAARKKA 371
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
387-772 |
8.70e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 40.82 E-value: 8.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 387 LSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSS 466
Cdd:pfam19220 50 LLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 467 ------LITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEkqaqlaqtlq 540
Cdd:pfam19220 130 eteqnrALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAELTRRLAE---------- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 541 qqeqasqglrhqveqLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLEIL 620
Cdd:pfam19220 200 ---------------LETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERASLRMKLEALTARAAATEQLL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 621 QQ---QLQVANEARDSAQTSVTQAQREKAELSRKVEELQAcvETARQEQHEAQAQVAELELQLRSE------QQKATEKE 691
Cdd:pfam19220 265 AEarnQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEA--DLERRTQQFQEMQRARAELEERAEmltkalAAKDAALE 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 692 RVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRAADALEeqqrciselkaetrslveqhkrerkeleEERAGRKGLEARL 771
Cdd:pfam19220 343 RAEERIASLSDRIAELTKRFEVERAALEQANRRLKEELQ----------------------------RERAERALAQGAL 394
|
.
gi 2217283087 772 Q 772
Cdd:pfam19220 395 E 395
|
|
| MAP65_ASE1 |
pfam03999 |
Microtubule associated protein (MAP65/ASE1 family); |
549-742 |
9.11e-03 |
|
Microtubule associated protein (MAP65/ASE1 family);
Pssm-ID: 427641 [Multi-domain] Cd Length: 477 Bit Score: 40.76 E-value: 9.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 549 LRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEKEKAAKLE----ILQQQL 624
Cdd:pfam03999 95 LDTQLEHLRKEKAPRLAEIKELLEQLQQLCEELGEEPLPLLIDPLPSLEELESFRKHLENLRNEKERRLEevneLKKQIK 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 625 QVANEARDSAQTSVTQAQREKAELSRKVEelQACVETARQEQHEAQAQVAELElqlrseqqkatekervaQEKDQLQEQL 704
Cdd:pfam03999 175 LLMEELDLVPGTDFEEDLLCESEDNFCLS--RENIDKLRKLIKQLEEQKAERE-----------------EKIDDLREKI 235
|
170 180 190
....*....|....*....|....*....|....*...
gi 2217283087 705 QALKESLKVtkgSLEEEKRRAADALEEQQRCISELKAE 742
Cdd:pfam03999 236 LELWNRLQV---PQEEQESFVRENNSLSQDTIDALREE 270
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
647-742 |
9.13e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 9.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 647 ELSRKVEELQACVETARQEQHEA-QAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKRRA 725
Cdd:COG0542 415 ELERRLEQLEIEKEALKKEQDEAsFERLAELRDELAELEEELEALKARWEAEKELIEEIQELKEELEQRYGKIPELEKEL 494
|
90
....*....|....*..
gi 2217283087 726 ADALEEQQRCISELKAE 742
Cdd:COG0542 495 AELEEELAELAPLLREE 511
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
254-709 |
9.37e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 40.97 E-value: 9.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 254 MQQRIDRLALLNEKQAASPLePKELEELRDKN---ESLTmrLHETLKQC-QDLKTEK-SQMDRKINQLSEENGDLSFK-- 326
Cdd:PRK04778 27 NYKRIDELEERKQELENLPV-NDELEKVKKLNltgQSEE--KFEEWRQKwDEIVTNSlPDIEEQLFEAEELNDKFRFRka 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 327 ----------LREFASHLQQLQDALNELT---EEHSKATQEWLEKQAQLEKELSAalqdkkcleeKNEILQGKLSQLEEH 393
Cdd:PRK04778 104 kheineieslLDLIEEDIEQILEELQELLeseEKNREEVEQLKDLYRELRKSLLA----------NRFSFGPALDELEKQ 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 394 LSQLQDNPPQ-----EKGEVLGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLA-----ERGHFEEEKQQ 463
Cdd:PRK04778 174 LENLEEEFSQfveltESGDYVEAREILDQLEEELAALEQIMEEIPELLKELQTELPDQLQELKAgyrelVEEGYHLDHLD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 464 LSSLITDLQSSISNLSQAKEELEQasqahgARLTAQVASLTSELTTLNATIQQQdqelAGLKQQAKEKQAQLAQTLQQQE 543
Cdd:PRK04778 254 IEKEIQDLKEQIDENLALLEELDL------DEAEEKNEEIQERIDQLYDILERE----VKARKYVEKNSDTLPDFLEHAK 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 544 QASQGLRHQVEQLSSS--LKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREA---SLRER-DAALKQLEALEKEKAAKL 617
Cdd:PRK04778 324 EQNKELKEEIDRVKQSytLNESELESVRQLEKQLESLEKQYDEITERIAEQEIaysELQEElEEILKQLEEIEKEQEKLS 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 618 EILQQQLQVANEARDSAQtsvtQAQREKAELSRKVEE--LQACVETARQEQHEAQAQVAELELQLrseQQKATEKERVAQ 695
Cdd:PRK04778 404 EMLQGLRKDELEAREKLE----RYRNKLHEIKRYLEKsnLPGLPEDYLEMFFEVSDEIEALAEEL---EEKPINMEAVNR 476
|
490
....*....|....
gi 2217283087 696 EKDQLQEQLQALKE 709
Cdd:PRK04778 477 LLEEATEDVETLEE 490
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1535-1683 |
9.69e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 9.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217283087 1535 AQVEELSKKLadsdQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKL--QMEKAKTHYDAKKQ 1612
Cdd:COG4717 71 KELKELEEEL----KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPE 146
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217283087 1613 QNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTK-EAEQTCRHLTAQVRSLEAQVAHADQQLRDL 1683
Cdd:COG4717 147 RLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSlATEEELQDLAEELEELQQRLAELEEELEEA 218
|
|
| |
