|
Name |
Accession |
Description |
Interval |
E-value |
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
39-213 |
7.71e-50 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 174.84 E-value: 7.71e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 39 WRKLKNSQEAQQRQATLVRKLQAKVLQYRSWCQELEKRLEA---------------TGGPIPQRWENVEEPNLDELLVRL 103
Cdd:pfam15035 1 RRKLQAYQEAQQRQAQLVQKLQAKVLQYKKRCSELEQQLLEktselektelllrklTLEPRLQRLEREHSADLEEALIRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 104 EEEQQRCESLAEVNTQLRLHMEKADVVNKALREDVEKLTVDWSRARDELMRKESQWQMEQEFFKGYLKGEHGRLLSLWRE 183
Cdd:pfam15035 81 EEERQRSESLSQVNSLLREQLEQASRANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWRE 160
|
170 180 190
....*....|....*....|....*....|
gi 2462579268 184 VVTFRRHFLEMKSATDRDLMELKAEHVRLS 213
Cdd:pfam15035 161 VVAVRRQFTELKTATERDLSELKTEFSRTS 190
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
632-1166 |
9.21e-26 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 115.42 E-value: 9.21e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 632 RMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLE 711
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 712 QLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLE 791
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 792 VQIQTVTQAKEVIQGEVrcLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQ 871
Cdd:COG1196 400 AQLEELEEAEEALLERL--ERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 872 ELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQ-----MQLETEKERVSLLETLLQTQKELADASQ 946
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGavavlIGVEAAYEAALEAALAAALQNIVVEDDE 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 947 QLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQH--RDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDD 1024
Cdd:COG1196 558 VAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGaaVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALR 637
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1025 SQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQME 1104
Cdd:COG1196 638 RAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL 717
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579268 1105 LLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEAL 1166
Cdd:COG1196 718 EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
636-1193 |
3.07e-25 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 113.88 E-value: 3.07e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 636 AEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQ 715
Cdd:COG1196 209 AEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 716 EAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQ 795
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 796 TVTQAKEVIQGEVRCLKLELDTERSQAEQERD--AAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKwEKERSWHQQEL 873
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAqlEELEEAEEALLERLERLEEELEELEEALAELEEE-EEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 874 AKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAlcQMQLETEKERVSLLETLLQTQKELADASQQ---LER 950
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA--AARLLLLLEAEADYEGFLEGVKAALLLAGLrglAGA 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 951 LRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQ-DKMDLQKQVEDLKSQLVAQDDSQRLV 1029
Cdd:COG1196 526 VAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPlDKIRARAALAAALARGAIGAAVDLVA 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1030 EQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQE 1109
Cdd:COG1196 606 SDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELA 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1110 VKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSAL 1189
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
....
gi 2462579268 1190 QQAL 1193
Cdd:COG1196 766 EREL 769
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
429-1052 |
3.78e-24 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 110.03 E-value: 3.78e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 429 EGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKE 508
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 509 EQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLK 588
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 589 TEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQL 668
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 669 QKAEEAGAELQADLRDIQEEKEEIQKKLS-----ESRHQQEAATTQLEQLHQEAKRQEEVLA--RAVQEKEALVREKAAL 741
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLllleaEADYEGFLEGVKAALLLAGLRGLAGAVAvlIGVEAAYEAALEAALA 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 742 EVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEvtkgQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQ 821
Cdd:COG1196 546 AALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAAL----AAALARGAIGAAVDLVASDLREADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 822 AEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAI 901
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 902 QAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQEttgiLQTQLQEAQRELK 981
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE----LERELERLEREIE 777
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579268 982 E------AArqhRDDLAALQEESSSLLQDKMDLQKQVEDLKsQLVAQddsqrlVEQEVQEKLRETqeYNRIQKELER 1052
Cdd:COG1196 778 AlgpvnlLA---IEEYEELEERYDFLSEQREDLEEARETLE-EAIEE------IDRETRERFLET--FDAVNENFQE 842
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
382-907 |
1.60e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 105.02 E-value: 1.60e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 382 QDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSL 461
Cdd:COG1196 263 AELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEEL 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 462 SKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSE 541
Cdd:COG1196 343 EEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEE 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 542 LITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQ 621
Cdd:COG1196 423 LEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 622 LEEENQSVCSRMEAAEQARNALQVDlaeaekrrEALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 701
Cdd:COG1196 503 YEGFLEGVKAALLLAGLRGLAGAVA--------VLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRA 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 702 QQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNS 781
Cdd:COG1196 575 TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGE 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 782 VIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREK 861
Cdd:COG1196 655 GGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAER 734
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2462579268 862 WEKERswHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREE 907
Cdd:COG1196 735 EELLE--ELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
381-951 |
9.56e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 99.24 E-value: 9.56e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 381 YQDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLagqtvdlQGEVDS 460
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARL-------EQDIAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 461 LSKERELLQKAREELRQQLEVLEQEAwrlrrvnVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLS 540
Cdd:COG1196 307 LEERRRELEERLEELEEELAELEEEL-------EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 541 ELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLL 620
Cdd:COG1196 380 ELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 621 QLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALweknthLEAQLQKAEEAGAELQADLRDIQeekEEIQKKLSESR 700
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLL------LEAEADYEGFLEGVKAALLLAGL---RGLAGAVAVLI 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 701 HQQEAATTQLEQLHQEAkRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQN 780
Cdd:COG1196 531 GVEAAYEAALEAALAAA-LQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 781 SVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLRE 860
Cdd:COG1196 610 EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 861 KWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKE 940
Cdd:COG1196 690 EEELELE-EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE 768
|
570
....*....|.
gi 2462579268 941 LADASQQLERL 951
Cdd:COG1196 769 LERLEREIEAL 779
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
456-1114 |
4.55e-20 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 97.52 E-value: 4.55e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 456 GEVDSLSKERELLQKArEELRQQLEVLEQEAWRlrrvnvelqlQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQ 535
Cdd:PTZ00121 1109 GKAEEARKAEEAKKKA-EDARKAEEARKAEDAR----------KAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKK 1177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 536 SESLSELITLREALESSHLEgELLRQEQtevtAALARAEQSIAELSSSENTLKTEvADLRAAAVKLSAlNEALALDKVGL 615
Cdd:PTZ00121 1178 AEAARKAEEVRKAEELRKAE-DARKAEA----ARKAEEERKAEEARKAEDAKKAE-AVKKAEEAKKDA-EEAKKAEEERN 1250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 616 NQQLLQLEEENQSVCSRMEA---AEQARNALQVDLAEAEKRREAL--WEKNTHLEAQLQKAEEA--GAELQADLRDIQEE 688
Cdd:PTZ00121 1251 NEEIRKFEEARMAHFARRQAaikAEEARKADELKKAEEKKKADEAkkAEEKKKADEAKKKAEEAkkADEAKKKAEEAKKK 1330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 689 KEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEV-----LARAVQEKEALVREKAALEVR----LQAVERDRQDLAEQL 759
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKaeaaeKKKEEAKKKADAAKKKAEEKKkadeAKKKAEEDKKKADEL 1410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 760 QGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQI--QTVTQAKEVIQGEVRCLKLE----LDTERSQAEQERDA----- 828
Cdd:PTZ00121 1411 KKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKadEAKKKAEEAKKAEEAKKKAEeakkADEAKKKAEEAKKAdeakk 1490
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 829 -------AARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwhqQELAKALESLEREKMELEMRLKEQQTEMEAI 901
Cdd:PTZ00121 1491 kaeeakkKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA---DEAKKAEEKKKADELKKAEELKKAEEKKKAE 1567
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 902 QAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELaDASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELK 981
Cdd:PTZ00121 1568 EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM-KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK 1646
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 982 EAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLK----------SQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELE 1051
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKkaeedekkaaEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 1052 REKASLTLSLMEKEQRLLVLQEAdSIRQQELSALRQDMQEAQGEQKELSAQME-LLRQEVKEKE 1114
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKKAEEA-KKDEEEKKKIAHLKKEEEKKAEEIRKEKEaVIEEELDEED 1789
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
241-951 |
1.09e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.89 E-value: 1.09e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 241 REPAQLLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNH 320
Cdd:TIGR02168 239 EELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 321 TELMEHEASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSSIFsqfdyQDADKALTLVRSVLTRRRQ 400
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRL-----EELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 401 AVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLtgERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLE 480
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA--ELKELQAELEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 481 VLEQEAWRLRRVNVELQLQGDSaQGQKEEQQEELHLAVRERERLQEMLMGLEAkqseSLSELITLREALES--------- 551
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDS-LERLQENLEGFSEGVKALLKNQSGLSGILG----VLSELISVDEGYEAaieaalggr 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 552 --------------------------------SHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAV 599
Cdd:TIGR02168 547 lqavvvenlnaakkaiaflkqnelgrvtflplDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 600 KLSALNEALALDK-VGLNQQLLQLEEENQSVCSRM----EAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEA 674
Cdd:TIGR02168 627 VVDDLDNALELAKkLRPGYRIVTLDGDLVRPGGVItggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 675 GAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQD 754
Cdd:TIGR02168 707 LEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEE 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 755 LAEQLQGLSSAKELLESSLFEAQQQnsvievtKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLA 834
Cdd:TIGR02168 787 LEAQIEQLKEELKALREALDELRAE-------LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAA 859
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 835 QAE--QEGKTALEQQKAAHEKEVNQLREKWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQA 912
Cdd:TIGR02168 860 EIEelEELIEELESELEALLNERASLEEALALLRS-ELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI 938
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 2462579268 913 E------SALCQMQLETEKERVSLLETLLQ-TQKELADASQQLERL 951
Cdd:TIGR02168 939 DnlqerlSEEYSLTLEEAEALENKIEDDEEeARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
436-1129 |
1.29e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.51 E-value: 1.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 436 RLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELH 515
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 516 LAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLR 595
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 596 AAAVKLSALNEALALDKVGLNQQLLQLEEENQSVcsRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAG 675
Cdd:TIGR02168 393 LQIASLNNEIERLEARLERLEDRRERLQQEIEEL--LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 676 AELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEAL-VREK------AALEVRLQAV 748
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELIsVDEGyeaaieAALGGRLQAV 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 749 ERDRQDLAEQLQG----------------LSSAKELLESSLFEAQQQNSVIEVTK------------------------- 787
Cdd:TIGR02168 551 VVENLNAAKKAIAflkqnelgrvtflpldSIKGTEIQGNDREILKNIEGFLGVAKdlvkfdpklrkalsyllggvlvvdd 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 788 --------GQLEVQIQTVTQAKEVIQG---------EVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAA 850
Cdd:TIGR02168 631 ldnalelaKKLRPGYRIVTLDGDLVRPggvitggsaKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEEL 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 851 HEKEVNQLREKWEKERSWHQQElaKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQlETEKERVSL 930
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALR--KDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELA-EAEAEIEEL 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 931 LETLLQTQKELADASQQLERLRQDMkvqklkeqettgilqTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQK 1010
Cdd:TIGR02168 788 EAQIEQLKEELKALREALDELRAEL---------------TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSE 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1011 QVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQ 1090
Cdd:TIGR02168 853 DIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE 932
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 2462579268 1091 EAQGE----QKELSAQMELLRQEVKEKEADFLAQEAQLLEELE 1129
Cdd:TIGR02168 933 GLEVRidnlQERLSEEYSLTLEEAEALENKIEDDEEEARRRLK 975
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
468-1166 |
4.10e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.97 E-value: 4.10e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 468 LQKAREELRQQLEVLEQE---AWRLRRVNVEL-QLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELI 543
Cdd:TIGR02168 191 LEDILNELERQLKSLERQaekAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 544 TLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLE 623
Cdd:TIGR02168 271 ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 624 EENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsrHQQ 703
Cdd:TIGR02168 351 EELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE--LLK 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 704 EAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQ-QNSV 782
Cdd:TIGR02168 429 KLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGfSEGV 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 783 IEVTKGQLE--------------------------------VQIQTVTQAKEVIQ-----GEVRCLKLELDTERSQAEQE 825
Cdd:TIGR02168 509 KALLKNQSGlsgilgvlselisvdegyeaaieaalggrlqaVVVENLNAAKKAIAflkqnELGRVTFLPLDSIKGTEIQG 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 826 RDAAARQLAQAEQ----------------------------EGKTALEQQKAAHEK----------------------EV 855
Cdd:TIGR02168 589 NDREILKNIEGFLgvakdlvkfdpklrkalsyllggvlvvdDLDNALELAKKLRPGyrivtldgdlvrpggvitggsaKT 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 856 NQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQT-EMEAIQAQREEERTQAESALCQMQLETEKERV-SLLET 933
Cdd:TIGR02168 669 NSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEElEEELEQLRKELEELSRQISALRKDLARLEAEVeQLEER 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 934 LLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQtQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVE 1013
Cdd:TIGR02168 749 IAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE-ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLE 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1014 DLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQ 1093
Cdd:TIGR02168 828 SLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELE 907
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579268 1094 GEQKELSAQMELLRQ---EVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQ-EAKAAQLQLRLRSTESQLEAL 1166
Cdd:TIGR02168 908 SKRSELRRELEELREklaQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKiEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
245-770 |
1.36e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 88.84 E-value: 1.36e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 245 QLLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELm 324
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDI- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 325 EHEASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSSIFSQFDYQDADKALTLVRSVLTRRRQAVQD 404
Cdd:COG1196 305 ARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 405 LRQQLAGCQEAVNLLQQQHDQwEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQ 484
Cdd:COG1196 385 AEELLEALRAAAELAAQLEEL-EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 485 EAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLR-------EALESSHLEGE 557
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAvavligvEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 558 LLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENqSVCSRMEAAE 637
Cdd:COG1196 544 LAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD-ARYYVLGDTL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 638 QARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEA 717
Cdd:COG1196 623 LGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 718 KRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLE 770
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEE 755
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
545-1169 |
1.30e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.88 E-value: 1.30e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 545 LREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEE 624
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 625 ENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQE 704
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 705 AATTQLEQLHQEAKRQEEVLARAVQEKEALvrEKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIE 784
Cdd:TIGR02168 397 SLNNEIERLEARLERLEDRRERLQQEIEEL--LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAE 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 785 VTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAAR-----QLAQAEQEGKTALEqqkAAHEKEVNQLR 859
Cdd:TIGR02168 475 QALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGIlgvlsELISVDEGYEAAIE---AALGGRLQAVV 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 860 EKwekerswHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAL--CQMQLETEKERVSLLETLLQT 937
Cdd:TIGR02168 552 VE-------NLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLgvAKDLVKFDPKLRKALSYLLGG 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 938 ---QKELADASQQLERLRQDMKVQKLK--------------EQETTGILQTQ-----LQEAQRELKEAARQHRDDLAALQ 995
Cdd:TIGR02168 625 vlvVDDLDNALELAKKLRPGYRIVTLDgdlvrpggvitggsAKTNSSILERRreieeLEEKIEELEEKIAELEKALAELR 704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 996 EESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQeklRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEAD 1075
Cdd:TIGR02168 705 KELEELEEELEQLRKELEELSRQISALRKDLARLEAEVE---QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAE 781
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1076 SIRQQelsaLRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQE---AQLLEELEASHITEQQLRASLWAQEAKAAQL 1152
Cdd:TIGR02168 782 AEIEE----LEAQIEQLKEELKALREALDELRAELTLLNEEAANLRerlESLERRIAATERRLEDLEEQIEELSEDIESL 857
|
650
....*....|....*..
gi 2462579268 1153 QLRLRSTESQLEALAAE 1169
Cdd:TIGR02168 858 AAEIEELEELIEELESE 874
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
565-1169 |
2.82e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 81.26 E-value: 2.82e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 565 EVTAALARAEQSIAELSSSENTLKTEVAdlraAAVKLSALNEAL-ALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNAL 643
Cdd:TIGR02168 183 RTRENLDRLEDILNELERQLKSLERQAE----KAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 644 QVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEV 723
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 724 LARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEV 803
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRER 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 804 IQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAK--ALESLE 881
Cdd:TIGR02168 419 LQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARldSLERLQ 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 882 REKMELEMRLKE---QQTEMEAIQAQ-------REEERTQAESAL------------------CQMQLETEKERVSLLET 933
Cdd:TIGR02168 499 ENLEGFSEGVKAllkNQSGLSGILGVlselisvDEGYEAAIEAALggrlqavvvenlnaakkaIAFLKQNELGRVTFLPL 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 934 LLQTQKELaDASQQLERLRQDMKVQKLKEQETTG--------------ILQTQLQEAQRELKE----------------- 982
Cdd:TIGR02168 579 DSIKGTEI-QGNDREILKNIEGFLGVAKDLVKFDpklrkalsyllggvLVVDDLDNALELAKKlrpgyrivtldgdlvrp 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 983 ------AARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKAS 1056
Cdd:TIGR02168 658 ggvitgGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1057 LTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQlLEELEASHiteQ 1136
Cdd:TIGR02168 738 LEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREA-LDELRAEL---T 813
|
650 660 670
....*....|....*....|....*....|...
gi 2462579268 1137 QLRASLWAQEAKAAQLQLRLRSTESQLEALAAE 1169
Cdd:TIGR02168 814 LLNEEAANLRERLESLERRIAATERRLEDLEEQ 846
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
428-1139 |
4.84e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 80.50 E-value: 4.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 428 EEGKALRQRLQK-----LTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLE----VLEQEAWRLRRVNVELQL 498
Cdd:TIGR02169 211 ERYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEeieqLLEELNKKIKDLGEEEQL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 499 QGDSAQGQKEEQQEELHLAVRERERLQEmlmGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIA 578
Cdd:TIGR02169 291 RVKEKIGELEAEIASLERSIAEKERELE---DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 579 ELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALW 658
Cdd:TIGR02169 368 DLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 659 EKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEA---KRQEEVLARAVQEKEALV 735
Cdd:TIGR02169 448 LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVrggRAVEEVLKASIQGVHGTV 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 736 RE--------KAALEV----RLQAVERDRQDLAEQ-----------------LQGLSSAKELLESSL------------- 773
Cdd:TIGR02169 528 AQlgsvgeryATAIEVaagnRLNNVVVEDDAVAKEaiellkrrkagratflpLNKMRDERRDLSILSedgvigfavdlve 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 774 FEAQQQNSVIEVTKGQLEVqiQTVTQAKEvIQGEVRCLKLELDT-ERSQAEQERDAAARqlaqaeqegktALEQQKAAHE 852
Cdd:TIGR02169 608 FDPKYEPAFKYVFGDTLVV--EDIEAARR-LMGKYRMVTLEGELfEKSGAMTGGSRAPR-----------GGILFSRSEP 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 853 KEVNQLREKWEkerswhqqELAKALESLEREKMELEMRLKEQQTEMEAiqAQREEERTQAESALCQMQLETEKERVSLLE 932
Cdd:TIGR02169 674 AELQRLRERLE--------GLKRELSSLQSELRRIENRLDELSQELSD--ASRKIGEIEKEIEQLEQEEEKLKERLEELE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 933 TLLQ-TQKELADASQQLERLR---QDMKVQKLKEQETTG-----ILQTQLQEAQRELKEAARQHRDDLAALQE---ESSS 1000
Cdd:TIGR02169 744 EDLSsLEQEIENVKSELKELEariEELEEDLHKLEEALNdlearLSHSRIPEIQAELSKLEEEVSRIEARLREieqKLNR 823
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1001 LLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQ 1080
Cdd:TIGR02169 824 LTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 1081 ELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLR 1139
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
519-896 |
6.32e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.10 E-value: 6.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 519 RERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAA 598
Cdd:TIGR02168 677 REIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 599 VKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAEL 678
Cdd:TIGR02168 757 TELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 679 QADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAkrqeevlaravqekEALVREKAALEVRLQAVERDRQDLAEQ 758
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL--------------EALLNERASLEEALALLRSELEELSEE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 759 LQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQA----KEVIQGEVRCLKLELDTERSQAEQERDAAARQLA 834
Cdd:TIGR02168 903 LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERlseeYSLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 835 QAEQEGKTALEQQkaaheKEVNQLREKWEKERSwhqqELAKALESLER--EKMELEMRLKEQQT 896
Cdd:TIGR02168 983 ELGPVNLAAIEEY-----EELKERYDFLTAQKE----DLTEAKETLEEaiEEIDREARERFKDT 1037
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
457-1053 |
1.47e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 79.41 E-value: 1.47e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 457 EVDSLSKERELLQKArEELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHlAVRERERLQEMLMGLEAKQS 536
Cdd:PTZ00121 1303 KADEAKKKAEEAKKA-DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAE-AAEEKAEAAEKKKEEAKKKA 1380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 537 ESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSalnealaldkvgln 616
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA-------------- 1446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 617 QQLLQLEEENQSVCSRMEAAEQARNALQVDlAEAEKRREALWEKNTHLEAQlQKAEEAGAELQADLRDIQEEKEEIQKKL 696
Cdd:PTZ00121 1447 DEAKKKAEEAKKAEEAKKKAEEAKKADEAK-KKAEEAKKADEAKKKAEEAK-KKADEAKKAAEAKKKADEAKKAEEAKKA 1524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 697 SESRHQQEAATTQLEQLHQEAKRQEEVLA----RAVQEKEALVREKAALEVRLQAVERdrqdlAEQLQGLSSAKELLESS 772
Cdd:PTZ00121 1525 DEAKKAEEAKKADEAKKAEEKKKADELKKaeelKKAEEKKKAEEAKKAEEDKNMALRK-----AEEAKKAEEARIEEVMK 1599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 773 LFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHE 852
Cdd:PTZ00121 1600 LYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEE 1679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 853 KEVNQLREKWEKERSWHQQELAKALESLEREKME-----LEMRLKEQQTEMEAIQAQR--EEERTQAESA---------L 916
Cdd:PTZ00121 1680 AKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEekkkaEELKKAEEENKIKAEEAKKeaEEDKKKAEEAkkdeeekkkI 1759
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 917 CQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETT----GILQTQLQEAQRELKEAARQHRDDLA 992
Cdd:PTZ00121 1760 AHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANiiegGKEGNLVINDSKEMEDSAIKEVADSK 1839
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579268 993 ALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQK-ELERE 1053
Cdd:PTZ00121 1840 NMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKdDIERE 1901
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
871-1195 |
4.76e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.28 E-value: 4.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 871 QELAKALESLEREKMELE--MRLKEQQTEMEAIQAQREEERTQAESAlcqmqlETEKERVSLLETLLQTQKELADASQQL 948
Cdd:COG1196 196 GELERQLEPLERQAEKAEryRELKEELKELEAELLLLKLRELEAELE------ELEAELEELEAELEELEAELAELEAEL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 949 ERLRQDMKVQKLKEQEttgilqtqLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRL 1028
Cdd:COG1196 270 EELRLELEELELELEE--------AQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1029 VEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQ 1108
Cdd:COG1196 342 LEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEE 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1109 EVKEKEADFLAQEAQLLEELEAshiteqQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSA 1188
Cdd:COG1196 422 ELEELEEALAELEEEEEEEEEA------LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL 495
|
....*..
gi 2462579268 1189 LQQALGS 1195
Cdd:COG1196 496 LLEAEAD 502
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
552-1145 |
1.25e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 75.85 E-value: 1.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 552 SHLEGELLRQEQTEVTAALARAEQSIAELSSSentLKTEVADLRAAAVKLSALNEALAlDKVGLNQQLLQLEEENQSVCS 631
Cdd:PRK02224 190 DQLKAQIEEKEEKDLHERLNGLESELAELDEE---IERYEEQREQARETRDEADEVLE-EHEERREELETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 632 RMEAAEQARNALQVDLAEAEKRREALWEKNTHL--EAQLQKAEEAGAELQADlrDIQEEKEEIQKKLSESRHQQEAATTQ 709
Cdd:PRK02224 266 TIAETEREREELAEEVRDLRERLEELEEERDDLlaEAGLDDADAEAVEARRE--ELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 710 LEQLHQEAKRQEEvlaRAVQEKEalvrEKAALEVRLQAVERDRQDLAEQLqglssakELLESSLFEAQQQNSVIEVTKGQ 789
Cdd:PRK02224 344 AESLREDADDLEE---RAEELRE----EAAELESELEEAREAVEDRREEI-------EELEEEIEELRERFGDAPVDLGN 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 790 LEVQIQTVTQAKEVIQGEVRCLKLELDTERsqaeqERDAAARQLAQAeqeGKTALEQQKAAHEKEVNQLREKWEKerswh 869
Cdd:PRK02224 410 AEDFLEELREERDELREREAELEATLRTAR-----ERVEEAEALLEA---GKCPECGQPVEGSPHVETIEEDRER----- 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 870 QQELAKALESLEREKMELEMRLkeqqtemeaiqaQREEERTQAESalcqmQLETEKERVSLLETLLQTQKELADA-SQQL 948
Cdd:PRK02224 477 VEELEAELEDLEEEVEEVEERL------------ERAEDLVEAED-----RIERLEERREDLEELIAERRETIEEkRERA 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 949 ERLRQDMKVQKLKEQETtgilqtqlQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRL 1028
Cdd:PRK02224 540 EELRERAAELEAEAEEK--------REAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERL 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1029 VEQEVQEKLRETQEYNRIQKELEREK-------ASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSA 1101
Cdd:PRK02224 612 REKREALAELNDERRERLAEKRERKReleaefdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELE 691
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 2462579268 1102 QMELLRQEVKEKEADFLAQEAqLLEELEASHITEQQLRASLWAQ 1145
Cdd:PRK02224 692 ELEELRERREALENRVEALEA-LYDEAEELESMYGDLRAELRQR 734
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
709-1207 |
1.82e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.36 E-value: 1.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 709 QLEQLHQEAKRQEEvlARAVQEKEALVREKAALevrlqaveRDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKG 788
Cdd:COG1196 201 QLEPLERQAEKAER--YRELKEELKELEAELLL--------LKLRELEAELEELEAELEELEAELEELEAELAELEAELE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 789 QLEVQIQTVTQAKEVIQGEVRclklELDTERSQAEQERDAAARQLAQAEQEgktaleqqkaahEKEVNQLREKWEKERSW 868
Cdd:COG1196 271 ELRLELEELELELEEAQAEEY----ELLAELARLEQDIARLEERRRELEER------------LEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 869 HQQELAKALESLEREKMELEMRLKEQQtemEAIQAQREEERTQAEsalcqmQLETEKERVSLLETLLQTQKELADASQQL 948
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELA---EAEEALLEAEAELAE------AEEELEELAEELLEALRAAAELAAQLEEL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 949 ERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRL 1028
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1029 VEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQEL--SALRQDMQEAQGEQKELSAQMELL 1106
Cdd:COG1196 486 LAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAleAALAAALQNIVVEDDEVAAAAIEY 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1107 RQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLY 1186
Cdd:COG1196 566 LKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGR 645
|
490 500
....*....|....*....|.
gi 2462579268 1187 SALQQALGSVCESRPELSGGG 1207
Cdd:COG1196 646 LREVTLEGEGGSAGGSLTGGS 666
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
456-1166 |
2.37e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.10 E-value: 2.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 456 GEVDSLSKERELLQKAREELRQQLEVLEQE---AWRLRRVNVELQ-LQGDSAQGQKEEQQEELHLAVRERERLQEMLMGL 531
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRRErekAERYQALLKEKReYEGYELLKEKEALERQKEAIERQLASLEEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 532 EAKQSESLSELITLREALESSHLE-GELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALAL 610
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 611 DKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNthleaqlqkaeeagAELQADLRDIQEEKE 690
Cdd:TIGR02169 337 EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDEL--------------KDYREKLEKLKREIN 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 691 EIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLE 770
Cdd:TIGR02169 403 ELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 771 SSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCL-----KLELDTERSQAEQERDAAAR-------------- 831
Cdd:TIGR02169 483 KELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVhgtvaQLGSVGERYATAIEVAAGNRlnnvvveddavake 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 832 --QLAQAEQEGK-TALEQQK-AAHEKEVNQLRE---------------KWEKERSW--------HQQELAKAL------- 877
Cdd:TIGR02169 563 aiELLKRRKAGRaTFLPLNKmRDERRDLSILSEdgvigfavdlvefdpKYEPAFKYvfgdtlvvEDIEAARRLmgkyrmv 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 878 ----ESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLL-QTQKELADASQQLERLR 952
Cdd:TIGR02169 643 tlegELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLdELSQELSDASRKIGEIE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 953 QDMKvQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQ-----DDSQR 1027
Cdd:TIGR02169 723 KEIE-QLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiQAELS 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1028 LVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLR 1107
Cdd:TIGR02169 802 KLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLE 881
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 1108 QEVKEKEADFLAQEAQlleeLEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEAL 1166
Cdd:TIGR02169 882 SRLGDLKKERDELEAQ----LRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
244-771 |
3.63e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.59 E-value: 3.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 244 AQLLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTEL 323
Cdd:COG1196 267 AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEEL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 324 MEHEASLsRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGsghensleldssifsQFDYQDADKALTLVRSVLTRRRQAVQ 403
Cdd:COG1196 347 EEAEEEL-EEAEAELAEAEEALLEAEAELAEAEEELEEL---------------AEELLEALRAAAELAAQLEELEEAEE 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 404 DLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLE 483
Cdd:COG1196 411 ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 484 QEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQ 563
Cdd:COG1196 491 ARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAK 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 564 TEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNAL 643
Cdd:COG1196 571 AGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT 650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 644 QVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEV 723
Cdd:COG1196 651 LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQL 730
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 2462579268 724 LARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLES 771
Cdd:COG1196 731 EAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
534-1068 |
4.35e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.10 E-value: 4.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 534 KQSESLSELITLREALESSHLEGELLRQEQTevTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKV 613
Cdd:COG4913 249 EQIELLEPIRELAERYAAARERLAELEYLRA--ALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELD 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 614 GLNQQLLQLEEEnqsvcsRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQ 693
Cdd:COG4913 327 ELEAQIRGNGGD------RLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEEL 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 694 KKLSESRHQQEAATTQLEQLHQEAKrqeevlaravQEKEALVREKAALEVRLQAVerdRQDLAEQLqGLSSAK-----EL 768
Cdd:COG4913 401 EALEEALAEAEAALRDLRRELRELE----------AEIASLERRKSNIPARLLAL---RDALAEAL-GLDEAElpfvgEL 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 769 LESSLFEAQQQNSV------------------------IEVTKGQLEVQIQ---TVTQAKEVIQGEVRCLKLELDTERSQ 821
Cdd:COG4913 467 IEVRPEEERWRGAIervlggfaltllvppehyaaalrwVNRLHLRGRLVYErvrTGLPDPERPRLDPDSLAGKLDFKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 822 AeqeRDAAARQLAQAEQ----EGKTALEQQKAAHEKE--VNQLREKWEKERSWHQQEL-------AKALESLEREKMELE 888
Cdd:COG4913 547 F---RAWLEAELGRRFDyvcvDSPEELRRHPRAITRAgqVKGNGTRHEKDDRRRIRSRyvlgfdnRAKLAALEAELAELE 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 889 MRLKEQQTEMEAIQAQREEERTQAEsaLCQMQLETEKERVSlletLLQTQKELADASQQLERLRQDMkvQKLKEqettgi 968
Cdd:COG4913 624 EELAEAEERLEALEAELDALQERRE--ALQRLAEYSWDEID----VASAEREIAELEAELERLDASS--DDLAA------ 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 969 LQTQLQEAQRELKEAarqhRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRL-VEQEVQEKLRETQE---YN 1044
Cdd:COG4913 690 LEEQLEELEAELEEL----EEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLeLRALLEERFAAALGdavER 765
|
570 580
....*....|....*....|....
gi 2462579268 1045 RIQKELEREKASLTLSLMEKEQRL 1068
Cdd:COG4913 766 ELRENLEERIDALRARLNRAEEEL 789
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
632-1169 |
4.86e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 70.71 E-value: 4.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 632 RMEAAEQARNALQvDLAEAEKRREALWEKNTHLEA-----QLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAA 706
Cdd:COG4913 243 ALEDAREQIELLE-PIRELAERYAAARERLAELEYlraalRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 707 TTQLEQLHQEakrqeeVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQnsvievt 786
Cdd:COG4913 322 REELDELEAQ------IRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAE------- 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 787 kgqlevqiqtVTQAKEVIQGEVRclklELDTERSQAEQERDAAARQLAQAEQEgKTALEQQKAAHEKEVNQLREKW---- 862
Cdd:COG4913 389 ----------AAALLEALEEELE----ALEEALAEAEAALRDLRRELRELEAE-IASLERRKSNIPARLLALRDALaeal 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 863 -----------------EKERSWH-----------------QQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEE 908
Cdd:COG4913 454 gldeaelpfvgelievrPEEERWRgaiervlggfaltllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDP 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 909 RTQAEsalcqmQLETEKERVS-LLETLLQTQKELA--DASQQLERLRQDMKVQ-KLKEQETTGILQTQLQEAQREL--KE 982
Cdd:COG4913 534 DSLAG------KLDFKPHPFRaWLEAELGRRFDYVcvDSPEELRRHPRAITRAgQVKGNGTRHEKDDRRRIRSRYVlgFD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 983 AARQhrddLAALQEESSSLLQDKMDLQKQVEDLKSQLvAQDDSQRLVEQEVQEKLRETQEYNRIQKE---LEREKASLTL 1059
Cdd:COG4913 608 NRAK----LAALEAELAELEEELAEAEERLEALEAEL-DALQERREALQRLAEYSWDEIDVASAEREiaeLEAELERLDA 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1060 S---LMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQ 1136
Cdd:COG4913 683 SsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDA 762
|
570 580 590
....*....|....*....|....*....|...
gi 2462579268 1137 QLRASLWAQEAKAAQLQLRLRSTESQLEALAAE 1169
Cdd:COG4913 763 VERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
814-1169 |
7.77e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.10 E-value: 7.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 814 ELDTERSQAEQERDAAARQLAQAE---QEGKTALEQQKAAHEK--EVNQLREKWEKERSWhqqELAKALESLEREKMELE 888
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDliiDEKRQQLERLRREREKaeRYQALLKEKREYEGY---ELLKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 889 MRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQEttgi 968
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELED---- 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 969 LQTQLQEAQRELKEAARQHRDDLAALQEEsssllqdkmdlQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQK 1048
Cdd:TIGR02169 320 AEERLAKLEAEIDKLLAEIEELEREIEEE-----------RKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1049 ELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEadflaqeaQLLEEL 1128
Cdd:TIGR02169 389 DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE--------WKLEQL 460
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2462579268 1129 EASHITEQQlraSLWAQEAKAAQLQLRLRSTESQLEALAAE 1169
Cdd:TIGR02169 461 AADLSKYEQ---ELYDLKEEYDRVEKELSKLQRELAEAEAQ 498
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
636-1151 |
8.65e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.17 E-value: 8.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 636 AEQARNALQVDLAEAEKRREALweknthleaqlQKAEEAgaelqadlRDIQE-EKEEIQKKLSESRHQQEAATTQLEQLH 714
Cdd:PTZ00121 1100 AEEAKKTETGKAEEARKAEEAK-----------KKAEDA--------RKAEEaRKAEDARKAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 715 QEAKRQEEvlARAVQEKEALVREKAALEVRlqaverdrqdLAEQLQGLSSAKELLESSLFEAQQQnsVIEVTKGQLEVQI 794
Cdd:PTZ00121 1161 EDARKAEE--ARKAEDAKKAEAARKAEEVR----------KAEELRKAEDARKAEAARKAEEERK--AEEARKAEDAKKA 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 795 QTVTQAKEVIQGEVRCLKLE---LDTERSQAEQERDA--AARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwh 869
Cdd:PTZ00121 1227 EAVKKAEEAKKDAEEAKKAEeerNNEEIRKFEEARMAhfARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKA-- 1304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 870 qQELAKALESlEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSlletllQTQKELADASQQLE 949
Cdd:PTZ00121 1305 -DEAKKKAEE-AKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA------EEKAEAAEKKKEEA 1376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 950 RLRQDMKVQKLKEQETTGILQTQLQEAQREL-----KEAARQHRDDLAALQEE--SSSLLQDKMDLQKQVEDLKSQL--- 1019
Cdd:PTZ00121 1377 KKKADAAKKKAEEKKKADEAKKKAEEDKKKAdelkkAAAAKKKADEAKKKAEEkkKADEAKKKAEEAKKADEAKKKAeea 1456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1020 -VAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKE 1098
Cdd:PTZ00121 1457 kKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA 1536
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579268 1099 LSAQMEllrQEVKEKEADFLAQEAQLLEEL----EASHITEQQLRASLWAQEAKAAQ 1151
Cdd:PTZ00121 1537 DEAKKA---EEKKKADELKKAEELKKAEEKkkaeEAKKAEEDKNMALRKAEEAKKAE 1590
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
244-755 |
1.20e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 1.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 244 AQLLLLLAKTQELEKEAHERSQELIQLKSqgdlEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILEtnhtEL 323
Cdd:COG1196 288 AEEYELLAELARLEQDIARLEERRRELEE----RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAE----AE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 324 MEHEASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSsifsqfdyQDADKALTLVRSVLTRRRQAVQ 403
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAE--------EALLERLERLEEELEELEEALA 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 404 DLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQ----L 479
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFlegvK 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 480 EVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELL 559
Cdd:COG1196 512 AALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAA 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 560 RQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEAlaldkVGLNQQLLQLEEENQSVCSRMEAAEQA 639
Cdd:COG1196 592 LARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRA-----VTLAGRLREVTLEGEGGSAGGSLTGGS 666
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 640 RNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAattQLEQLHQEAKR 719
Cdd:COG1196 667 RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEA---EREELLEELLE 743
|
490 500 510
....*....|....*....|....*....|....*.
gi 2462579268 720 QEEVLARAVQEKEALVREKAALEVRLQAVERDRQDL 755
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
419-772 |
2.17e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.54 E-value: 2.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 419 LQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQL 498
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 499 QGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIA 578
Cdd:TIGR02168 762 EIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLE 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 579 ELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALW 658
Cdd:TIGR02168 842 DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELR 921
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 659 EKNTHLEAQLQKAEEAGAELQADLRDIQE-EKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEkealvre 737
Cdd:TIGR02168 922 EKLAQLELRLEGLEVRIDNLQERLSEEYSlTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEE------- 994
|
330 340 350
....*....|....*....|....*....|....*
gi 2462579268 738 kaalevrLQAVERDRQDLAEQLQGLSSAKELLESS 772
Cdd:TIGR02168 995 -------YEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
398-888 |
2.28e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 68.53 E-value: 2.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 398 RRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRq 477
Cdd:PRK02224 249 RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELR- 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 478 qlEVLEQEAWRLRRVNVELQLQGDSAQGQKEeqqeelhlavrERERLQEMLMGLEAKQSESLSELITLREALESSHLEGE 557
Cdd:PRK02224 328 --DRLEECRVAAQAHNEEAESLREDADDLEE-----------RAEELREEAAELESELEEAREAVEDRREEIEELEEEIE 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 558 LLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKL-SALNEALALDKVGLNQQLLQLEEENQSVCSRMEAA 636
Cdd:PRK02224 395 ELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTArERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDR 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 637 EQarnalqvdLAEAEKRREALWEKNTHLEAQLQKAEEAgAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQE 716
Cdd:PRK02224 475 ER--------VEELEAELEDLEEEVEEVEERLERAEDL-VEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRER 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 717 AKRQEEvlARAVQEKEALVREKAALEVR--LQAVERDRQDLAEQLQGLssakELLESSLFEAQQQNSVIEVTKGQLEVQI 794
Cdd:PRK02224 546 AAELEA--EAEEKREAAAEAEEEAEEAReeVAELNSKLAELKERIESL----ERIRTLLAAIADAEDEIERLREKREALA 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 795 QTVTQAKEVIQGE---VRCLKLELDTER-SQAEQERDAAARQLAQAE------QEGKTALEQQKAAHEKEVNQLREKweK 864
Cdd:PRK02224 620 ELNDERRERLAEKrerKRELEAEFDEARiEEAREDKERAEEYLEQVEekldelREERDDLQAEIGAVENELEELEEL--R 697
|
490 500
....*....|....*....|....
gi 2462579268 865 ERSWHQQELAKALESLEREKMELE 888
Cdd:PRK02224 698 ERREALENRVEALEALYDEAEELE 721
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
402-1057 |
3.85e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.79 E-value: 3.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 402 VQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481
Cdd:TIGR02169 296 IGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEE 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 482 LEQEAWRLRRVNVELQLQGD-------SAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESShl 554
Cdd:TIGR02169 376 VDKEFAETRDELKDYREKLEklkreinELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ-- 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 555 EGEL----------------LRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALaldkVGLNQQ 618
Cdd:TIGR02169 454 EWKLeqlaadlskyeqelydLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGV----HGTVAQ 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 619 LLQLEEENQSVCsrmEAAEQARNALQV--DLAEAEKRREALWEKN----THL--------EAQLQKAEEAGAELQA-DLR 683
Cdd:TIGR02169 530 LGSVGERYATAI---EVAAGNRLNNVVveDDAVAKEAIELLKRRKagraTFLplnkmrdeRRDLSILSEDGVIGFAvDLV 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 684 DIQEEKEEIQKKL-----------SESRHQQEAATTQLEQLHQE----------AKRQEEVLARAVQEKEALVREkaale 742
Cdd:TIGR02169 607 EFDPKYEPAFKYVfgdtlvvedieAARRLMGKYRMVTLEGELFEksgamtggsrAPRGGILFSRSEPAELQRLRE----- 681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 743 vRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQ- 821
Cdd:TIGR02169 682 -RLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSEl 760
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 822 -------AEQERDAAARQLAQAEQEGKTALE--QQKAAHEKEVNQLREKWEKErswhQQELAKALESLEREKMELEMRLK 892
Cdd:TIGR02169 761 keleariEELEEDLHKLEEALNDLEARLSHSriPEIQAELSKLEEEVSRIEAR----LREIEQKLNRLTLEKEYLEKEIQ 836
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 893 EQQTEMEAIQAQREEERtqAESALCQMQLETEKERVSLLET-LLQTQKELADASQQLERLRQDMKVQKLKEQETT----- 966
Cdd:TIGR02169 837 ELQEQRIDLKEQIKSIE--KEIENLNGKKEELEEELEELEAaLRDLESRLGDLKKERDELEAQLRELERKIEELEaqiek 914
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 967 -----GILQTQLQEAQRELKEAarqhrDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQ 1041
Cdd:TIGR02169 915 krkrlSELKAKLEALEEELSEI-----EDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLD 989
|
730
....*....|....*.
gi 2462579268 1042 EYNRIQKELEREKASL 1057
Cdd:TIGR02169 990 ELKEKRAKLEEERKAI 1005
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
382-713 |
5.15e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.39 E-value: 5.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 382 QDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSL 461
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 462 SKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSE 541
Cdd:TIGR02168 781 EAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE 860
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 542 LITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQ 621
Cdd:TIGR02168 861 IEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDN 940
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 622 LeeenqsvcsrmeaAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 701
Cdd:TIGR02168 941 L-------------QERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTA 1007
|
330
....*....|..
gi 2462579268 702 QQEAATTQLEQL 713
Cdd:TIGR02168 1008 QKEDLTEAKETL 1019
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
380-882 |
5.97e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 67.25 E-value: 5.97e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 380 DYQDADKALTLVRSVLT-----RRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVD- 453
Cdd:COG4913 263 RYAAARERLAELEYLRAalrlwFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEq 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 454 LQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAV-----------RERE 522
Cdd:COG4913 343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALaeaeaalrdlrRELR 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 523 RLQEMLMGLEAKQSESLSELITLREALESsHLE---------GELL--RQEQTEVTAALARAeqsiaeLSSSENTLKTEV 591
Cdd:COG4913 423 ELEAEIASLERRKSNIPARLLALRDALAE-ALGldeaelpfvGELIevRPEEERWRGAIERV------LGGFALTLLVPP 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 592 ADLRAAAVKLSALNEALALD--KVGLNQQLLQLEE-ENQSVCSRMEAAE------------QARNALQVDLAEAEKR--- 653
Cdd:COG4913 496 EHYAAALRWVNRLHLRGRLVyeRVRTGLPDPERPRlDPDSLAGKLDFKPhpfrawleaelgRRFDYVCVDSPEELRRhpr 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 654 ----------REALWEKNTHLEAQLQ-----KAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAK 718
Cdd:COG4913 576 aitragqvkgNGTRHEKDDRRRIRSRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAE 655
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 719 RQEEvlaravqekealvrekaalEVRLQAVERDRQDLAEQLQGLSSAKELLEsslfEAQQQnsvievtKGQLEVQIQTVT 798
Cdd:COG4913 656 YSWD-------------------EIDVASAEREIAELEAELERLDASSDDLA----ALEEQ-------LEELEAELEELE 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 799 QAKEVIQGEVRclklELDTERSQAEQERDAAARQLAQAEQEGKTALEQ------QKAAHEKEVNQLREKWEKERSWHQQE 872
Cdd:COG4913 706 EELDELKGEIG----RLEKELEQAEEELDELQDRLEAAEDLARLELRAlleerfAAALGDAVERELRENLEERIDALRAR 781
|
570
....*....|
gi 2462579268 873 LAKALESLER 882
Cdd:COG4913 782 LNRAEEELER 791
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
462-1169 |
6.52e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 67.30 E-value: 6.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 462 SKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSE 541
Cdd:pfam02463 165 SRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 542 LITLREALESSHLEGELLRQE-QTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLL 620
Cdd:pfam02463 245 LLRDEQEEIESSKQEIEKEEEkLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 621 QLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQ----KAEEAGAELQADLRDIQEEKEEIQKKL 696
Cdd:pfam02463 325 KAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEellaKKKLESERLSSAAKLKEEELELKSEEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 697 SESR-----------HQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALV---------------------REKAALEVR 744
Cdd:pfam02463 405 KEAQlllelarqledLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEkqelkllkdelelkksedllkETQLVKLQE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 745 LQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSV----IEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERS 820
Cdd:pfam02463 485 QLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGriisAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQ 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 821 QAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESL----EREKMELEMRLKEQQT 896
Cdd:pfam02463 565 KLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVvegiLKDTELTKLKESAKAK 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 897 EMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEA 976
Cdd:pfam02463 645 ESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLA 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 977 QRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEklrETQEYNRIQKELEREKAS 1056
Cdd:pfam02463 725 DRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKT---EKLKVEEEKEEKLKAQEE 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1057 LTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQ 1136
Cdd:pfam02463 802 ELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEE 881
|
730 740 750
....*....|....*....|....*....|...
gi 2462579268 1137 QLRASLWAQEAKAAQLQLRLRSTESQLEALAAE 1169
Cdd:pfam02463 882 QKLKDELESKEEKEKEEKKELEEESQKLNLLEE 914
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
401-1112 |
9.13e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.63 E-value: 9.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 401 AVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDL-QGEVDSLSKERELLQKAREELRQQL 479
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIASLERSI 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 480 EVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELL 559
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDY 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 560 RQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQA 639
Cdd:TIGR02169 391 REKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 640 RNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLE-----QLH 714
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEvaagnRLN 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 715 QEAKRQEEVLARAVQ---EKEA-------------------LVREKAALEVRLQAVERDRQ------------------D 754
Cdd:TIGR02169 551 NVVVEDDAVAKEAIEllkRRKAgratflplnkmrderrdlsILSEDGVIGFAVDLVEFDPKyepafkyvfgdtlvvediE 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 755 LAEQLQG----LSSAKELLESS--------------LFEAQQQNSVIEVT--KGQLEVQIQTVTQAKEVIQGEVRCLKLE 814
Cdd:TIGR02169 631 AARRLMGkyrmVTLEGELFEKSgamtggsraprggiLFSRSEPAELQRLRerLEGLKRELSSLQSELRRIENRLDELSQE 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 815 LD----------TERSQAEQERDAAARQLAQAE------QEGKTALEQQKAAHEKEVNQLREKWEKERswhqqelaKALE 878
Cdd:TIGR02169 711 LSdasrkigeieKEIEQLEQEEEKLKERLEELEedlsslEQEIENVKSELKELEARIEELEEDLHKLE--------EALN 782
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 879 SLERekMELEMRLKEQQTEMEAIQAQREEERTQAESalcqmqLETEKERVSLLETLLQtqkelaDASQQLERLRQDMKVQ 958
Cdd:TIGR02169 783 DLEA--RLSHSRIPEIQAELSKLEEEVSRIEARLRE------IEQKLNRLTLEKEYLE------KEIQELQEQRIDLKEQ 848
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 959 KLKEQETTGILQTQLQEAQRELKEAA---RQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQE 1035
Cdd:TIGR02169 849 IKSIEKEIENLNGKKEELEEELEELEaalRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEA 928
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579268 1036 KLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALrQDMQEAQGEQKELSAQMELLRQEVKE 1112
Cdd:TIGR02169 929 LEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAI-QEYEEVLKRLDELKEKRAKLEEERKA 1004
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
524-1069 |
1.15e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 66.30 E-value: 1.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 524 LQEMLMGLEAKQSESLSELITLREALESSHLEGELLrQEQTEVTAALARAEQSI--AELSSSENTLKTEVADLRAAAVKL 601
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEITGLTEKASSARSQANSI-QSQLEIIQEQARNQNSMymRQLSDLESTVSQLRSELREAKRMY 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 602 SALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQAD 681
Cdd:pfam15921 341 EDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 682 LRDIQEEKEEIQKKL----SESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEAL---VREKAALEVRLQAVERDRQD 754
Cdd:pfam15921 421 LDDRNMEVQRLEALLkamkSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLrkvVEELTAKKMTLESSERTVSD 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 755 LAEQLQGLSSAkelLESSLFEAQQQNSVIEVTKGQLEvQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLA 834
Cdd:pfam15921 501 LTASLQEKERA---IEATNAEITKLRSRVDLKLQELQ-HLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 835 QAEQEGKTA--LEQQKAAHEKEVNqlrekwekERSWHQQELAKALESLEREKMELEMRLKEQQTE-MEAIQAQREEERTQ 911
Cdd:pfam15921 577 LVGQHGRTAgaMQVEKAQLEKEIN--------DRRLELQEFKILKDKKDAKIRELEARVSDLELEkVKLVNAGSERLRAV 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 912 AEsalcqmqleTEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKeaarQHRDDL 991
Cdd:pfam15921 649 KD---------IKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE----QTRNTL 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 992 AALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEV----QEKLRETQEYNRIQKEL-----EREKASLTLSLM 1062
Cdd:pfam15921 716 KSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMtnanKEKHFLKEEKNKLSQELstvatEKNKMAGELEVL 795
|
....*..
gi 2462579268 1063 EKEQRLL 1069
Cdd:pfam15921 796 RSQERRL 802
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
519-1134 |
1.78e-10 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 65.51 E-value: 1.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 519 RERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAA 598
Cdd:pfam05483 85 KEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETC 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 599 VKLSALNEALALDKVGLNQQLLQLeeeNQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKaEEAGAEL 678
Cdd:pfam05483 165 ARSAEKTKKYEYEREETRQVYMDL---NNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKK-EINDKEK 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 679 QADLRDIQEEKEEiqKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQ-------AVERD 751
Cdd:pfam05483 241 QVSLLLIQITEKE--NKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQrsmstqkALEED 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 752 RQDLAEQLQGLSSAKELLESSLFEAQQQNSVI----EVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERD 827
Cdd:pfam05483 319 LQIATKTICQLTEEKEAQMEELNKAKAAHSFVvtefEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTK 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 828 AAARQLAQAEQEGKTALEQQKAAHEkevNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREE 907
Cdd:pfam05483 399 FKNNKEVELEELKKILAEDEKLLDE---KKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVED 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 908 ERTQAESALCQMQLETEKERVSLLETLLQTQkELADASQQLERLRQDMKVQKLKEQETTGILQTqlqeaqreLKEAARQH 987
Cdd:pfam05483 476 LKTELEKEKLKNIELTAHCDKLLLENKELTQ-EASDMTLELKKHQEDIINCKKQEERMLKQIEN--------LEEKEMNL 546
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 988 RDDLAALQEEsssllqdkmdLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQR 1067
Cdd:pfam05483 547 RDELESVREE----------FIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQE 616
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579268 1068 LLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHIT 1134
Cdd:pfam05483 617 NKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAI 683
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
592-939 |
4.19e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 64.32 E-value: 4.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 592 ADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKA 671
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL 749
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 672 EEAGAELQADLRDIQEEKEEIQKKLSE------------SRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKA 739
Cdd:TIGR02169 750 EQEIENVKSELKELEARIEELEEDLHKleealndlearlSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 740 ALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTER 819
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELE 909
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 820 SQAEQERDAAARQLAQAEqegktALEQQKAAHEKEVNQLREKWEKERSWHQqeLAKALESLEREKMELEmrlkeqQTEME 899
Cdd:TIGR02169 910 AQIEKKRKRLSELKAKLE-----ALEEELSEIEDPKGEDEEIPEEELSLED--VQAELQRVEEEIRALE------PVNML 976
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2462579268 900 AIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQK 939
Cdd:TIGR02169 977 AIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
417-1127 |
1.06e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.07 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 417 NLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVEL 496
Cdd:pfam02463 233 KLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDD 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 497 QLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQS------ESLSELITLREALESSHLEGELLRQEQTEVTAAL 570
Cdd:pfam02463 313 EEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREaeeeeeEELEKLQEKLEQLEEELLAKKKLESERLSSAAKL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 571 ARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEA 650
Cdd:pfam02463 393 KEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSED 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 651 EKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQ--------LEQLHQEAKRQEE 722
Cdd:pfam02463 473 LLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLgdlgvaveNYKVAISTAVIVE 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 723 VLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKE 802
Cdd:pfam02463 553 VSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDT 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 803 VIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKT----ALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALE 878
Cdd:pfam02463 633 ELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTkellEIQELQEKAESELAKEEILRRQLEIKKKEQREKEEL 712
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 879 SLEREKME--LEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMK 956
Cdd:pfam02463 713 KKLKLEAEelLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEK 792
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 957 VQKLKEQETTgILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEK 1036
Cdd:pfam02463 793 EEKLKAQEEE-LRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQE 871
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1037 LRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEAD 1116
Cdd:pfam02463 872 LLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKE 951
|
730
....*....|.
gi 2462579268 1117 FLAQEAQLLEE 1127
Cdd:pfam02463 952 ENNKEEEEERN 962
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
447-805 |
1.28e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 1.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 447 LAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRvnvelqlqgdsaqgqkeeQQEELHLAVRERERLQE 526
Cdd:TIGR02169 665 GILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQ------------------ELSDASRKIGEIEKEIE 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 527 MLMGLEAKQSESLSELitlREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAavKLSALNE 606
Cdd:TIGR02169 727 QLEQEEEKLKERLEEL---EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIP--EIQAELS 801
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 607 ALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQ 686
Cdd:TIGR02169 802 KLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLE 881
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 687 EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVER------DRQDLAEQLQ 760
Cdd:TIGR02169 882 SRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEipeeelSLEDVQAELQ 961
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2462579268 761 GLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQ 805
Cdd:TIGR02169 962 RVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
646-1015 |
1.52e-09 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 62.67 E-value: 1.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 646 DLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLeQLHQEAKRQEEVLA 725
Cdd:PRK04863 273 DYMRHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 726 RAVQEKEALV--------------REKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLE 791
Cdd:PRK04863 352 RYQADLEELEerleeqnevveeadEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERAKQLCG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 792 VQIQTVTQAKEVIQgEVRCLKLELDTERSQAEQE---RDAAARQLAQAEQEGKTALEQ--QKAAHEKEVNQLREkWEKer 866
Cdd:PRK04863 432 LPDLTADNAEDWLE-EFQAKEQEATEELLSLEQKlsvAQAAHSQFEQAYQLVRKIAGEvsRSEAWDVARELLRR-LRE-- 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 867 swhQQELAKALESLEREKMELEMRLKEQQTEMEAIQ--AQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADA 944
Cdd:PRK04863 508 ---QRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAefCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMAL 584
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 945 SQQLERLRQDmkVQKLKEQETTGI--------LQTQLQEAQ---RELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVE 1013
Cdd:PRK04863 585 RQQLEQLQAR--IQRLAARAPAWLaaqdalarLREQSGEEFedsQDVTEYMQQLLERERELTVERDELAARKQALDEEIE 662
|
..
gi 2462579268 1014 DL 1015
Cdd:PRK04863 663 RL 664
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
634-862 |
1.55e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 61.32 E-value: 1.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 634 EAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQL 713
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 714 HQEAKRQEEVLARAVQEKEALV----REKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQ 789
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 790 LEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKW 862
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
246-491 |
1.79e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 61.32 E-value: 1.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 246 LLLLLAKTQELEKEAHERSQELIQLKSQgdleKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELME 325
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 326 HEASLSRNAQEEKLSLQQVIKDITQVMVEegdniAQGSGHENSLELdssIFSQFDYQDADKALTLVRSVLTRRRQAVQDL 405
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEELAELLRA-----LYRLGRQPPLAL---LLSPEDFLDAVRRLQYLKYLAPARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 406 RQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQE 485
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
....*.
gi 2462579268 486 AWRLRR 491
Cdd:COG4942 236 AAAAAE 241
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
873-1111 |
2.78e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.55 E-value: 2.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 873 LAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQlETEKERVSLLETLLQTQKELADASQQLERLR 952
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-ALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 953 QDMKVQKLKEQETTGILQTQLQEAQRelkeAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQE 1032
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYR----LGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 1033 VQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVK 1111
Cdd:COG4942 166 RAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
267-778 |
5.07e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.82 E-value: 5.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 267 LIQLKSQ-GDLEKAELQDRVTELSALLTQSQKQNEDYEK--------------MIKALRETVEILETNHTELMEHEASLS 331
Cdd:PRK02224 189 LDQLKAQiEEKEEKDLHERLNGLESELAELDEEIERYEEqreqaretrdeadeVLEEHEERREELETLEAEIEDLRETIA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 332 rNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSSIFSQfDYQDADKALTLVRSVLTRRRQAVQDLRQQLAG 411
Cdd:PRK02224 269 -ETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEA-RREELEDRDEELRDRLEECRVAAQAHNEEAES 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 412 CQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRR 491
Cdd:PRK02224 347 LREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 492 VNVELQLQGDSAQGqkeeqqeelhlAVRERERLQEM----LMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVT 567
Cdd:PRK02224 427 REAELEATLRTARE-----------RVEEAEALLEAgkcpECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 568 AALARAEqSIAELSSSENTLKTevadlraaavKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDL 647
Cdd:PRK02224 496 ERLERAE-DLVEAEDRIERLEE----------RREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 648 AEAEKRREALWEKNTHL-------------EAQLQKAEEAGAELQ------ADLRDIQEEKEEIQKKLSESRHQQEAA-- 706
Cdd:PRK02224 565 EEAEEAREEVAELNSKLaelkeriesleriRTLLAAIADAEDEIErlrekrEALAELNDERRERLAEKRERKRELEAEfd 644
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579268 707 TTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERD---RQDLAEQLQGLSSAKELLESSLFEAQQ 778
Cdd:PRK02224 645 EARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENEleeLEELRERREALENRVEALEALYDEAEE 719
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
686-1052 |
7.17e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.46 E-value: 7.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 686 QEEKEEIQKKLSESRhqqeAATTQLEQLHQEAKRQEEVL---ARAVQEKEALVREKAALEVRLQAVerDRQDLAEQLQGL 762
Cdd:TIGR02168 171 KERRKETERKLERTR----ENLDRLEDILNELERQLKSLerqAEKAERYKELKAELRELELALLVL--RLEELREELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 763 SSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTersqaeqerdaaarqlaqaeqegkt 842
Cdd:TIGR02168 245 QEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR------------------------- 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 843 aLEQQKAAHEKEVNQLREKwEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQlE 922
Cdd:TIGR02168 300 -LEQQKQILRERLANLERQ-LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLE-E 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 923 TEKERVSLLETLLQTQKELADASQQLERLRQDMKVQklkeQETTGILQTQLQEAQRELKEAarqhrdDLAALQEESSSLL 1002
Cdd:TIGR02168 377 LEEQLETLRSKVAQLELQIASLNNEIERLEARLERL----EDRRERLQQEIEELLKKLEEA------ELKELQAELEELE 446
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1003 QDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELER 1052
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLER 496
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
393-754 |
9.95e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.08 E-value: 9.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 393 SVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGErdtlagqTVDLQGEVDSLSKERELLQKAR 472
Cdd:TIGR02169 667 LFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK-------IGEIEKEIEQLEQEEEKLKERL 739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 473 EELRQQLEVLEQEAWRLRRVNVEL-----QLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLRE 547
Cdd:TIGR02169 740 EELEEDLSSLEQEIENVKSELKELearieELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQ 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 548 ALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQ 627
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLR 899
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 628 SVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELqADLRDIQEEKEEIQKKLSESRHQQEAAt 707
Cdd:TIGR02169 900 ELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE-LSLEDVQAELQRVEEEIRALEPVNMLA- 977
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2462579268 708 tqLEQLHQEAKRQEEVlaraVQEKEALVREKAALEVRLQAVERDRQD 754
Cdd:TIGR02169 978 --IQEYEEVLKRLDEL----KEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
855-1166 |
1.02e-08 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 59.75 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 855 VNQLREKWEKERSWHQQELAKALESLEREKMELEMrlKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETL 934
Cdd:pfam17380 271 LNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEK--EEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERER 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 935 LQTQKELADASQQLERLRQD---MKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQ 1011
Cdd:pfam17380 349 ELERIRQEERKRELERIRQEeiaMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAE 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1012 VEDLKSQLVA--QDDSQRLVEQEVQEKLRETQEYNRI-QKELEREKASLTLSlMEKEQRLLVLQEADSIRQQELSALRQD 1088
Cdd:pfam17380 429 QEEARQREVRrlEEERAREMERVRLEEQERQQQVERLrQQEEERKRKKLELE-KEKRDRKRAEEQRRKILEKELEERKQA 507
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 1089 MQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLE-ELEASHITEQQLRaslwaqeaKAAQLQLRLRSTESQLEAL 1166
Cdd:pfam17380 508 MIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQqEMEERRRIQEQMR--------KATEERSRLEAMEREREMM 578
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
251-601 |
1.17e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.69 E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 251 AKTQELEKEAHERSQELIQLKSQGDL---EKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELMEHE 327
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEEleeELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEI 763
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 328 ASLSRNAQEEKLSLQQVIKDITQVMveegdniAQGSGHENSLELDSSIFSqfdyqDADKALTLVRSVLTRRRQAVQDLRQ 407
Cdd:TIGR02168 764 EELEERLEEAEEELAEAEAEIEELE-------AQIEQLKEELKALREALD-----ELRAELTLLNEEAANLRERLESLER 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 408 QLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAW 487
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRS 911
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 488 RLRRVNVELQLQ-GDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESshlegelLRQEQTEV 566
Cdd:TIGR02168 912 ELRRELEELREKlAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKR-------LENKIKEL 984
|
330 340 350
....*....|....*....|....*....|....*
gi 2462579268 567 TAALARAEQSIAELSSSENTLKTEVADLRAAAVKL 601
Cdd:TIGR02168 985 GPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETL 1019
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
971-1168 |
1.24e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.54 E-value: 1.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 971 TQLQEAQRELKEAARQhRDDLAALQEESSSLLQDKMDLQKQvEDLKSQLVAQDDSQRLVEQEvQEKLRETQEYNRIQKEL 1050
Cdd:COG4913 235 DDLERAHEALEDAREQ-IELLEPIRELAERYAAARERLAEL-EYLRAALRLWFAQRRLELLE-AELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1051 EREKASLTLSLMEKEQRLLVLQEADSIR----QQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLE 1126
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRGNGGDRleqlEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAA 391
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2462579268 1127 ELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAA 1168
Cdd:COG4913 392 LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
395-982 |
1.31e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.54 E-value: 1.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 395 LTRRRQAVQDLRQQLAGCQEAVNLL-----QQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKER---- 465
Cdd:COG4913 257 IRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIrgng 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 466 -ELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELIT 544
Cdd:COG4913 337 gDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRD 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 545 LREALESshlegelLRQEqtevtaalaraeqsIAELSSSENTLKTEVADLRAaavklsALNEALALDKVGLN--QQLLQL 622
Cdd:COG4913 417 LRRELRE-------LEAE--------------IASLERRKSNIPARLLALRD------ALAEALGLDEAELPfvGELIEV 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 623 EEENQSvcSRMeAAEQA----RNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSE 698
Cdd:COG4913 470 RPEEER--WRG-AIERVlggfALTLLVPPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 699 SRH--QQEAATTQ-------LEQLHQEAK-----------------------RQEEVL-ARAVQEKEALVREKAALEVRL 745
Cdd:COG4913 547 FRAwlEAELGRRFdyvcvdsPEELRRHPRaitragqvkgngtrhekddrrriRSRYVLgFDNRAKLAALEAELAELEEEL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 746 QAVERDRQDLAEQLQGLSSAKELLE--SSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQgevrclklELDTERSQAE 823
Cdd:COG4913 627 AEAEERLEALEAELDALQERREALQrlAEYSWDEIDVASAEREIAELEAELERLDASSDDLA--------ALEEQLEELE 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 824 QERDAAARQLAQAEQEgKTALEQQKAAHEKEVNQLREKWE----KERSWHQQELAKALESLEREKMELEMRlKEQQTEME 899
Cdd:COG4913 699 AELEELEEELDELKGE-IGRLEKELEQAEEELDELQDRLEaaedLARLELRALLEERFAAALGDAVERELR-ENLEERID 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 900 AIQAQREEERTQAESALCQMQLETEKERVSL---LETLLQTQKELAD-ASQQLERLRQDMKvQKLKEQETTGI--LQTQL 973
Cdd:COG4913 777 ALRARLNRAEEELERAMRAFNREWPAETADLdadLESLPEYLALLDRlEEDGLPEYEERFK-ELLNENSIEFVadLLSKL 855
|
....*....
gi 2462579268 974 QEAQRELKE 982
Cdd:COG4913 856 RRAIREIKE 864
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
574-1142 |
3.51e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 58.31 E-value: 3.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 574 EQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVcsrMEAAEQARNALQVDLAEAEKR 653
Cdd:pfam12128 247 QQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEK---RDELNGELSAADAAVAKDRSE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 654 REALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQL-HQEAKRQEEVL-ARAVQEK 731
Cdd:pfam12128 324 LEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKiKEQNNRDIAGIkDKLAKIR 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 732 EALVREKAALEVRLQAVERD-RQDLAEQLQGLSSAKELLESSLFEAQ-QQNSVI--EVTKGQLEVQIQTVTQAKEViQGE 807
Cdd:pfam12128 404 EARDRQLAVAEDDLQALESElREQLEAGKLEFNEEEYRLKSRLGELKlRLNQATatPELLLQLENFDERIERAREE-QEA 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 808 VRCLKLELDTERSQAEQERDAAARQLAQAE---QEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREK 884
Cdd:pfam12128 483 ANAEVERLQSELRQARKRRDQASEALRQASrrlEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPELLHR 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 885 MELEMRLKEQQT-----------EMEAIQA--------QREEERTQAESAL---CQMQLETEKERVSLLETLLQTQKELA 942
Cdd:pfam12128 563 TDLDPEVWDGSVggelnlygvklDLKRIDVpewaaseeELRERLDKAEEALqsaREKQAAAEEQLVQANGELEKASREET 642
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 943 DASQQLE-------RLRQDMKVQKLKEQETTG----ILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQ 1011
Cdd:pfam12128 643 FARTALKnarldlrRLFDEKQSEKDKKNKALAerkdSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQV 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1012 VEDLKSQLVAQDDSQRLVEQE---VQEKLRETQEYNRIQK---------ELEREKASLTLSLMEKEQRLlvlQEADSIRQ 1079
Cdd:pfam12128 723 VEGALDAQLALLKAAIAARRSgakAELKALETWYKRDLASlgvdpdviaKLKREIRTLERKIERIAVRR---QEVLRYFD 799
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 1080 QELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASL 1142
Cdd:pfam12128 800 WYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENL 862
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
832-1115 |
5.03e-08 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 57.44 E-value: 5.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 832 QLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREK---MELEMRLKEQQTEMeAIQAQREEE 908
Cdd:pfam17380 273 QLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARqaeMDRQAAIYAEQERM-AMERERELE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 909 RTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKV---QKLKEQETTGILQTQLQEAQRELKEAAR 985
Cdd:pfam17380 352 RIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAarkVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 986 QHRDDLAALQEESSSLL----QDKMDLQKQVEDLKSQ------------------LVAQDDSQRLVEQEVQEKLRETQEY 1043
Cdd:pfam17380 432 ARQREVRRLEEERAREMervrLEEQERQQQVERLRQQeeerkrkklelekekrdrKRAEEQRRKILEKELEERKQAMIEE 511
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462579268 1044 NRIQKELEREKASLTLSLMEKEQRLLVLQE-ADSIRQQELSALRQDMQEAQGEQKELSA---QMELLRQEVKEKEA 1115
Cdd:pfam17380 512 ERKRKLLEKEMEERQKAIYEEERRREAEEErRKQQEMEERRRIQEQMRKATEERSRLEAmerEREMMRQIVESEKA 587
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
616-1045 |
1.06e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.31 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 616 NQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREA--LWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQ 693
Cdd:COG4717 87 EEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLlpLYQELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 694 KKLSESRHQQEAATTQLEQL----HQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELL 769
Cdd:COG4717 167 ELEAELAELQEELEELLEQLslatEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 770 E-SSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQ---AEQEGKTALE 845
Cdd:COG4717 247 EaRLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALeelEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 846 QQKAAHEKEVNQLREKWEKERSWhqQELAKALESLEREkMELEMRLKEQQTEMEAIQAQREEERTQAesalcqmqLETEK 925
Cdd:COG4717 327 ALGLPPDLSPEELLELLDRIEEL--QELLREAEELEEE-LQLEELEQEIAALLAEAGVEDEEELRAA--------LEQAE 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 926 ERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTgiLQTQLQEAQRELKEAARQHRDDLAALQE-ESSSLLQD 1004
Cdd:COG4717 396 EYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEE--LEEELEELEEELEELREELAELEAELEQlEEDGELAE 473
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2462579268 1005 KMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNR 1045
Cdd:COG4717 474 LLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
395-609 |
1.48e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.16 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 395 LTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREE 474
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 475 LRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHL 554
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2462579268 555 EgelLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALA 609
Cdd:COG4942 182 E---LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
453-996 |
1.50e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.08 E-value: 1.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 453 DLQGEVDSLSKERELLQKAREElRQQLEVLEQEAWRLRRVNVELQ-LQGDSAQGQKEEQQEELHLAVRERERLQEMLMGL 531
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQ-IELLEPIRELAERYAAARERLAeLEYLRAALRLWFAQRRLELLEAELEELRAELARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 532 EAKQSESLSELITLREALEsshlegELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAavkLSALNEALALD 611
Cdd:COG4913 308 EAELERLEARLDALREELD------ELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEAL---LAALGLPLPAS 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 612 KVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQL----QKAEEAGAELQADLRDIQE 687
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 688 E----KEEIQKKLSESR--------------------HQQEAATTQLEQLH-------QEAKRQEEVLARAVQEKEALVR 736
Cdd:COG4913 459 ElpfvGELIEVRPEEERwrgaiervlggfaltllvppEHYAAALRWVNRLHlrgrlvyERVRTGLPDPERPRLDPDSLAG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 737 EkaaLEVR-------LQAVERDRQDLA-----EQL---------QGLSSAKelleSSLFEAQQQNSVIEV------TKGQ 789
Cdd:COG4913 539 K---LDFKphpfrawLEAELGRRFDYVcvdspEELrrhpraitrAGQVKGN----GTRHEKDDRRRIRSRyvlgfdNRAK 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 790 LEVQIQTVTQAKEVIQgevrclklELDTERSQAEQERDAAARQLAQAEQ-EGKTALEQQKAAHEKEVNQLREKWEKERSW 868
Cdd:COG4913 612 LAALEAELAELEEELA--------EAEERLEALEAELDALQERREALQRlAEYSWDEIDVASAEREIAELEAELERLDAS 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 869 HQ--QELAKALESLEREKMELEMRLKEQQTEMEAIQAQR---EEERTQAESALCQMQLETEKERVSLLETLLQTQKELAD 943
Cdd:COG4913 684 SDdlAALEEQLEELEAELEELEEELDELKGEIGRLEKELeqaEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAV 763
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 944 ASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQE 996
Cdd:COG4913 764 ERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPE 816
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
12-580 |
1.53e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.22 E-value: 1.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 12 KPQSLQLVLEEQVLALQQQMAENQAASWRKLKNSQEAQQRQATL-VRKLQAKVLQYRSWCQELEKRLEATGGPIPQRWEN 90
Cdd:TIGR02168 350 KEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELqIASLNNEIERLEARLERLEDRRERLQQEIEELLKK 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 91 VEEPNLDELLVRLEEEQQRCESLAEVNTQLRLHMEKADVVNKALREDVEKLTVDWSRARDELMRKESQWQMEQEFFKGY- 169
Cdd:TIGR02168 430 LEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVk 509
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 170 --------LKGEHGRLLSL-----------------------------WREVVTF-------RRHFLEMKSATDRDLMEL 205
Cdd:TIGR02168 510 allknqsgLSGILGVLSELisvdegyeaaieaalggrlqavvvenlnaAKKAIAFlkqnelgRVTFLPLDSIKGTEIQGN 589
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 206 KAEHVRLSGSLLTCCLRLTVGAQSREP---------------------------------------NGSGRMDGREPAQL 246
Cdd:TIGR02168 590 DREILKNIEGFLGVAKDLVKFDPKLRKalsyllggvlvvddldnalelakklrpgyrivtldgdlvRPGGVITGGSAKTN 669
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 247 LLLLAKTQELEkEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHtelmEH 326
Cdd:TIGR02168 670 SSILERRREIE-ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEV----EQ 744
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 327 EASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSSIFSQfDYQDADKALTLVRSVLTRRRQAVQDLR 406
Cdd:TIGR02168 745 LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE-ELKALREALDELRAELTLLNEEAANLR 823
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 407 QQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEA 486
Cdd:TIGR02168 824 ERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL 903
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 487 WRLRRVNVELQlqgdsaqgqkeeqqeelhlavRERERLQEMLMGLEAKQSESLSELITLREALESSH-LEGELLRQEQTE 565
Cdd:TIGR02168 904 RELESKRSELR---------------------RELEELREKLAQLELRLEGLEVRIDNLQERLSEEYsLTLEEAEALENK 962
|
650
....*....|....*
gi 2462579268 566 VTAALARAEQSIAEL 580
Cdd:TIGR02168 963 IEDDEEEARRRLKRL 977
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
666-900 |
2.03e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.77 E-value: 2.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 666 AQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRL 745
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 746 QAVERD----RQDLAEQLQGLSSAKELLESSLFeAQQQNSVIEVTKGQLevqIQTVTQAKEVIQGEVRCLKLELDTERSQ 821
Cdd:COG4942 93 AELRAEleaqKEELAELLRALYRLGRQPPLALL-LSPEDFLDAVRRLQY---LKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 822 AEQERDAAARQLAQAEQEgKTALEQQKAAHEKEVNQLREKwekerswhQQELAKALESLEREKMELEMRLKEQQTEMEA 900
Cdd:COG4942 169 LEAERAELEALLAELEEE-RAALEALKAERQKLLARLEKE--------LAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
524-1036 |
2.57e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.44 E-value: 2.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 524 LQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENtLKTEVADLRAAAVKLSA 603
Cdd:TIGR00606 575 LEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQD-EESDLERLKEEIEKSSK 653
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 604 LNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLR 683
Cdd:TIGR00606 654 QRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAP 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 684 DIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEAL------VREKAALEVRLQAVERDRQDLAE 757
Cdd:TIGR00606 734 GRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAkvcltdVTIMERFQMELKDVERKIAQQAA 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 758 QLQGLSSAKELLESSLFEAQQQNSVIEVTKgqlevQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAE 837
Cdd:TIGR00606 814 KLQGSDLDRTVQQVNQEKQEKQHELDTVVS-----KIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEE 888
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 838 QEGKTALEQQKAAHE-KEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAL 916
Cdd:TIGR00606 889 QLVELSTEVQSLIREiKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGK 968
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 917 CQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQK-----LKEQETTGILQTQLQEAQRELKEAARQHRDDL 991
Cdd:TIGR00606 969 DDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKiqerwLQDNLTLRKRENELKEVEEELKQHLKEMGQMQ 1048
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2462579268 992 AALQEESSSLLQDKMDLQKQVEDLK-SQLVAQDDSQRLVEQEVQEK 1036
Cdd:TIGR00606 1049 VLQMKQEHQKLEENIDLIKRNHVLAlGRQKGYEKEIKHFKKELREP 1094
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
369-1114 |
2.59e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.44 E-value: 2.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 369 LELDSSIFSQFDYQDADKALTLVRSVLTRRRQAVQdlrQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQ----KLTGER 444
Cdd:TIGR00606 377 LELDGFERGPFSERQIKNFHTLVIERQEDEAKTAA---QLCADLQSKERLKQEQADEIRDEKKGLGRTIElkkeILEKKQ 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 445 DTLAGQTVDLQGEVDSLSKERELLQKAREELRQqLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERL 524
Cdd:TIGR00606 454 EELKFVIKELQQLEGSSDRILELDQELRKAERE-LSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTT 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 525 QEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTaalaraEQSIAELSSSENTLKTEVADLRAAAVKLSAL 604
Cdd:TIGR00606 533 TRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQL------EDWLHSKSKEINQTRDRLAKLNKELASLEQN 606
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 605 NEALALDKVGLNQQLLQLEEENQSVCSrMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRD 684
Cdd:TIGR00606 607 KNHINNELESKEEQLSSYEDKLFDVCG-SQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQR 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 685 IQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEevlaravQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSS 764
Cdd:TIGR00606 686 VFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKE-------KRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNR 758
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 765 AKELLESSLFEAQQQNSVIeVTKGQLEVQIQTVTQAKEVIQGEVRclklelDTERSQAEQERDAAARQLAQAEQEGKTAL 844
Cdd:TIGR00606 759 DIQRLKNDIEEQETLLGTI-MPEEESAKVCLTDVTIMERFQMELK------DVERKIAQQAAKLQGSDLDRTVQQVNQEK 831
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 845 EQQKAAHEKEVNQLRE--KWEKERSWHQQELAKALESLEREKMELEMRLKEQQtemeAIQAQREEERTQAESalCQMQLE 922
Cdd:TIGR00606 832 QEKQHELDTVVSKIELnrKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQ----QFEEQLVELSTEVQS--LIREIK 905
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 923 TEKERVSLLETLL---QTQKELADASQQLERLRQDMKVQKLKEQ--ETTGILQTQLQEAQRELKEAARQHRDDLAALQEE 997
Cdd:TIGR00606 906 DAKEQDSPLETFLekdQQEKEELISSKETSNKKAQDKVNDIKEKvkNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQ 985
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 998 ssslLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIqKELEREKASLTLSLmeKEQRLLVLQEADSI 1077
Cdd:TIGR00606 986 ----LEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENEL-KEVEEELKQHLKEM--GQMQVLQMKQEHQK 1058
|
730 740 750
....*....|....*....|....*....|....*..
gi 2462579268 1078 RQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKE 1114
Cdd:TIGR00606 1059 LEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQ 1095
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
686-1129 |
2.99e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 2.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 686 QEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAAlEVRlQAVERDRQDLAEQLQGLSSA 765
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAE-DAR-KAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 766 KELLESSLFEAQQQNSVIEVTKGQLEV-QIQTVTQAKEVIQGEvRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTAL 844
Cdd:PTZ00121 1161 EDARKAEEARKAEDAKKAEAARKAEEVrKAEELRKAEDARKAE-AARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDA 1239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 845 EQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMElemRLKEQQTEMEAIQAQREEERTQAESAlcQMQLETE 924
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAD---ELKKAEEKKKADEAKKAEEKKKADEA--KKKAEEA 1314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 925 KERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQT--QLQEAQRELKEAARQHRDDLAALQEE---SS 999
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAaeEKAEAAEKKKEEAKKKADAAKKKAEEkkkAD 1394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1000 SLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQ--------EVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRllvl 1071
Cdd:PTZ00121 1395 EAKKKAEEDKKKADELKKAAAAKKKADEAKKKaeekkkadEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAK---- 1470
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1072 qEADSIRQQELSALRQDMQEAQGEQKELSAQmELLRQEVKEKEADFL--AQEAQLLEELE 1129
Cdd:PTZ00121 1471 -KADEAKKKAEEAKKADEAKKKAEEAKKKAD-EAKKAAEAKKKADEAkkAEEAKKADEAK 1528
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
814-935 |
3.33e-07 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 54.70 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 814 ELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQ--QELAKALESLEREKMELEMRL 891
Cdd:COG0542 415 ELERRLEQLEIEKEALKKEQDEASFERLAELRDELAELEEELEALKARWEAEKELIEeiQELKEELEQRYGKIPELEKEL 494
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 892 KEQQTEMEAIQAQREEERTQAESA----------LCQMqLETEKERVSLLETLL 935
Cdd:COG0542 495 AELEEELAELAPLLREEVTEEDIAevvsrwtgipVGKL-LEGEREKLLNLEEEL 547
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
570-1102 |
3.58e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 54.64 E-value: 3.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 570 LARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAE 649
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSN 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 650 AEKRREalweKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsrhqqeaATTQLEQLHQEAKRQEEVLARAVQ 729
Cdd:TIGR04523 206 LKKKIQ----KNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISN-------TQTQLNQLKDEQNKIKKQLSEKQK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 730 EKEALVREKAALEVRLQAVERDRQDLAEQLQglssaKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQgevr 809
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKE-----QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQIS---- 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 810 clklELDTERSQAEQERDAAARQLAQAEQEGKTaLEQQKAAHEKEVNQLREKwekerswhQQELAKALESLEREKMELEM 889
Cdd:TIGR04523 346 ----QLKKELTNSESENSEKQRELEEKQNEIEK-LKKENQSYKQEIKNLESQ--------INDLESKIQNQEKLNQQKDE 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 890 RLKEQQTEMEAIQaqREEERTQAESALCQMQLETEKERVSLLETLLqtqKELADASQQLERLRQDMKVQKLKEQETTGIL 969
Cdd:TIGR04523 413 QIKKLQQEKELLE--KEIERLKETIIKNNSEIKDLTNQDSVKELII---KNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 970 QTQLQEAQRELKEAARQHRD---DLAALQEESSSLLQ-------DKMDLQKQVEDLKSQLVAQDD--SQRLVEQEVQEKL 1037
Cdd:TIGR04523 488 QKELKSKEKELKKLNEEKKEleeKVKDLTKKISSLKEkieklesEKKEKESKISDLEDELNKDDFelKKENLEKEIDEKN 567
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579268 1038 RETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 1102
Cdd:TIGR04523 568 KEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSI 632
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
970-1169 |
4.23e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 4.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 970 QTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKE 1049
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1050 LEREKASL--TLSLMEKEQRLLVLQEADSIRQ---------QELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADfL 1118
Cdd:COG4942 102 QKEELAELlrALYRLGRQPPLALLLSPEDFLDavrrlqylkYLAPARREQAEELRADLAELAALRAELEAERAELEAL-L 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2462579268 1119 AQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAE 1169
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
438-1196 |
9.54e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 53.64 E-value: 9.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 438 QKLTGERDTLAGQTVDLQGEVDSLskeRELLQKAREELRQQLEVLEQEAWR---LRRVNVELQLQGDSAQGQKEEQQEEL 514
Cdd:pfam01576 211 RKLEGESTDLQEQIAELQAQIAEL---RAQLAKKEEELQAALARLEEETAQknnALKKIRELEAQISELQEDLESERAAR 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 515 HLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLE-GELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVAD 593
Cdd:pfam01576 288 NKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEvTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQ 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 594 LRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQ---- 669
Cdd:pfam01576 368 AKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELEsvss 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 670 ---KAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQ 746
Cdd:pfam01576 448 llnEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLS 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 747 AVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEvqiqtvtQAKEVIQGEVRCLKLELDTERsQAEQER 826
Cdd:pfam01576 528 DMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLE-------KTKNRLQQELDDLLVDLDHQR-QLVSNL 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 827 DAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwhqqeLAKALESLEREKMELEMRLKEQQTEMEAIQAQRE 906
Cdd:pfam01576 600 EKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALS-----LARALEEALEAKEELERTNKQLRAEMEDLVSSKD 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 907 E------ERTQAESALCQmQLETEKERVSLLETLLQTQKelaDASQQLERLRQDMKVQKLKEQETTgilQTQLQEAQREL 980
Cdd:pfam01576 675 DvgknvhELERSKRALEQ-QVEEMKTQLEELEDELQATE---DAKLRLEVNMQALKAQFERDLQAR---DEQGEEKRRQL 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 981 KEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLS 1060
Cdd:pfam01576 748 VKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQ 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1061 LMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELS---AQMELLRQEVKEKEADFLAQEAQLLEELEashitEQQ 1137
Cdd:pfam01576 828 SKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELAdeiASGASGKSALQDEKRRLEARIAQLEEELE-----EEQ 902
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 1138 LRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSALQQALGSV 1196
Cdd:pfam01576 903 SNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTV 961
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
408-1068 |
9.84e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 53.30 E-value: 9.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 408 QLAGCQEAVNLLQQQHDQWEEEGKALRQRLqklTGERDTLAGQTVDLQGEVDSLSKERELLQKAR-EELRQQLEVLEQEA 486
Cdd:pfam12128 277 RQEERQETSAELNQLLRTLDDQWKEKRDEL---NGELSAADAAVAKDRSELEALEDQHGAFLDADiETAAADQEQLPSWQ 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 487 WRLRRVNVELQLQGDSAQGQKEEQQEELHLAVrerERLQEMLMGLEAKQsESLSELITLREALESSHLEGelLRQEQTEv 566
Cdd:pfam12128 354 SELENLEERLKALTGKHQDVTAKYNRRRSKIK---EQNNRDIAGIKDKL-AKIREARDRQLAVAEDDLQA--LESELRE- 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 567 taalaRAEQSIAELSSSENTLKTEVADLRaaavklsalneaLALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNA---- 642
Cdd:pfam12128 427 -----QLEAGKLEFNEEEYRLKSRLGELK------------LRLNQATATPELLLQLENFDERIERAREEQEAANAever 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 643 LQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEE 722
Cdd:pfam12128 490 LQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPELLHRTDLDPEV 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 723 VLARAVQEKEALvrekaALEVRLQAVER-DRQDLAEQLQG-LSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQA 800
Cdd:pfam12128 570 WDGSVGGELNLY-----GVKLDLKRIDVpEWAASEEELRErLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFA 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 801 KeviqgevrclkleldtersQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESL 880
Cdd:pfam12128 645 R-------------------TALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQ 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 881 EREKMELEMRLKEQQTEME--------AIQAQREEERTQAESALCQMQLETEKERVSL---LETLLQTQKELADASQQLE 949
Cdd:pfam12128 706 KEQKREARTEKQAYWQVVEgaldaqlaLLKAAIAARRSGAKAELKALETWYKRDLASLgvdPDVIAKLKREIRTLERKIE 785
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 950 RLRQD-MKVQKLKE--QETTGILQTQLQEAQRELKEAARQHRDDLAALQEES----SSLLQDKMDLQKQVEDLKSQLVAQ 1022
Cdd:pfam12128 786 RIAVRrQEVLRYFDwyQETWLQRRPRLATQLSNIERAISELQQQLARLIADTklrrAKLEMERKASEKQQVRLSENLRGL 865
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 2462579268 1023 DDSQRLV-----EQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRL 1068
Cdd:pfam12128 866 RCEMSKLatlkeDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHF 916
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
524-1164 |
9.89e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 53.43 E-value: 9.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 524 LQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARaEQSIAELSSSENTLKTEVADLRAA--AVKL 601
Cdd:TIGR00618 210 TPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKK-QQLLKQLRARIEELRAQEAVLEETqeRINR 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 602 SALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAgaELQAD 681
Cdd:TIGR00618 289 ARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAH--EVATS 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 682 LRDIQEEKEEIQKKLSESRHQQEAATTQ-------LEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQD 754
Cdd:TIGR00618 367 IREISCQQHTLTQHIHTLQQQKTTLTQKlqslckeLDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAA 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 755 LAEQLQGLSSAKELLES---SLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLK---LELDTERSQAEQERDA 828
Cdd:TIGR00618 447 ITCTAQCEKLEKIHLQEsaqSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCgscIHPNPARQDIDNPGPL 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 829 AAR--QLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQRE 906
Cdd:TIGR00618 527 TRRmqRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQE-IQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSE 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 907 EERTQA-ESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAAR 985
Cdd:TIGR00618 606 AEDMLAcEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKM 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 986 QHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQddSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKE 1065
Cdd:TIGR00618 686 QSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNE--IENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAH 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1066 QRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFlaqeaqlLEELEASHITEQQLRASLWAQ 1145
Cdd:TIGR00618 764 FNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSD-------EDILNLQCETLVQEEEQFLSR 836
|
650
....*....|....*....
gi 2462579268 1146 EAKAAQLQLRLRSTESQLE 1164
Cdd:TIGR00618 837 LEEKSATLGEITHQLLKYE 855
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
935-1204 |
1.08e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.14 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 935 LQTQKELA----DASQQLERLRQDMKVQKLKEqettgiLQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQdkmdLQK 1010
Cdd:TIGR02168 205 LERQAEKAerykELKAELRELELALLVLRLEE------LREELEELQEELKEAEEELEELTAELQELEEKLEE----LRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1011 QVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQ 1090
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1091 EAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEashiTEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQ 1170
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL----QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270
....*....|....*....|....*....|....
gi 2462579268 1171 QPGNQAQAQAQLASLYSALQQALGSVCESRPELS 1204
Cdd:TIGR02168 431 EEAELKELQAELEELEEELEELQEELERLEEALE 464
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
936-1189 |
1.17e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 936 QTQKELADASQQLERLRQDMKVQKLKEQEttgiLQTQLQEAQRELKEAARQhrddLAALQEESSSLLQDKMDLQKQVEDL 1015
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKA----LLKQLAALERRIAALARR----IRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1016 KSQLVAQddsqrlvEQEVQEKLRETQEYNRIQKELEREKASltlSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGE 1095
Cdd:COG4942 96 RAELEAQ-------KEELAELLRALYRLGRQPPLALLLSPE---DFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1096 QKELSAQMELLRQEVKEKEAdflaQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQ 1175
Cdd:COG4942 166 RAELEAERAELEALLAELEE----ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
250
....*....|....
gi 2462579268 1176 AQAQAQLASLYSAL 1189
Cdd:COG4942 242 RTPAAGFAALKGKL 255
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
666-999 |
1.47e-06 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 52.21 E-value: 1.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 666 AQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRL 745
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 746 QAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIqgevrclkleLDTERSQAEQE 825
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAL----------SEAEAEQALDE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 826 RDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQR 905
Cdd:COG4372 188 LLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 906 EEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAAR 985
Cdd:COG4372 268 LVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLL 347
|
330
....*....|....
gi 2462579268 986 QHRDDLAALQEESS 999
Cdd:COG4372 348 VGLLDNDVLELLSK 361
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
601-831 |
1.58e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 601 LSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQA 680
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 681 DLRDIQEEKEEIQKKLSE--------SRHQQEAATTQLEQLHQEAKRQE--EVLARAVQEK-EALVREKAALEVRLQAVE 749
Cdd:COG4942 91 EIAELRAELEAQKEELAEllralyrlGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQaEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 750 RDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAA 829
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAA 250
|
..
gi 2462579268 830 AR 831
Cdd:COG4942 251 LK 252
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
553-1003 |
2.51e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 52.27 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 553 HLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSR 632
Cdd:PRK04863 257 DLFKHLITESTNYVAADYMRHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDH 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 633 MEAAEQARNAlqvdlAEAEKR-REALWEKNTHLEAQLQKAEEAG---AELQADLRDIQEEKEEIQKKLSESRHQQEAATT 708
Cdd:PRK04863 337 LNLVQTALRQ-----QEKIERyQADLEELEERLEEQNEVVEEADeqqEENEARAEAAEEEVDELKSQLADYQQALDVQQT 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 709 QLEQLHQEAKRQEEvlARAVQEKEALVREKAalEVRLQAVERDRQDLAEQlqglssakellessLFEAQQQNSVIEVTKG 788
Cdd:PRK04863 412 RAIQYQQAVQALER--AKQLCGLPDLTADNA--EDWLEEFQAKEQEATEE--------------LLSLEQKLSVAQAAHS 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 789 QLEVQIQTVTQA-----KEVIQGEVRCLKLELDTERSQAEQErDAAARQLAQAEQEgktaLEQQKAAhekevNQLREKWE 863
Cdd:PRK04863 474 QFEQAYQLVRKIagevsRSEAWDVARELLRRLREQRHLAEQL-QQLRMRLSELEQR----LRQQQRA-----ERLLAEFC 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 864 KErswHQQELAKAlESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAEsalcqmQLETEKERVSLLETLLQTqkelad 943
Cdd:PRK04863 544 KR---LGKNLDDE-DELEQLQEELEARLESLSESVSEARERRMALRQQLE------QLQARIQRLAARAPAWLA------ 607
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 944 ASQQLERLRQDMKVQKLKEQETTGILQtQLQEAQRELKEAARQHRDDLAALQEESSSLLQ 1003
Cdd:PRK04863 608 AQDALARLREQSGEEFEDSQDVTEYMQ-QLLERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
565-1114 |
3.14e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.60 E-value: 3.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 565 EVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALAldkvGLNQQLLQLEEENQSVCSRMEAAEQARNALQ 644
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIE----ELEKELESLEGSKRKLEEKIRELEERIEELK 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 645 VDLAEAEKRREALWE------KNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsrhqqeaattqLEQLHQEAK 718
Cdd:PRK03918 273 KEIEELEEKVKELKElkekaeEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE-----------LEEKEERLE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 719 RQEEvlaravqEKEALVREKAALEVRLQAVERDRQdLAEQLQGLSSAKELLesslfeaqqqnsvievTKGQLEVQIQTVT 798
Cdd:PRK03918 342 ELKK-------KLKELEKRLEELEERHELYEEAKA-KKEELERLKKRLTGL----------------TPEKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 799 QAKEVIQGEVRCLKLELdTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALE 878
Cdd:PRK03918 398 KAKEEIEEEISKITARI-GELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 879 SLEREKMELEMRLKEQQTemeaIQAQRE--EERTQAESALCQMQLETEKERVSLLETLlqtQKELADASQQLERLRQDMK 956
Cdd:PRK03918 477 KLRKELRELEKVLKKESE----LIKLKElaEQLKELEEKLKKYNLEELEKKAEEYEKL---KEKLIKLKGEIKSLKKELE 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 957 VQKLKEQETTgILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQ---VEDLKSQLVAQDDSQRLVEQEV 1033
Cdd:PRK03918 550 KLEELKKKLA-ELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEyleLKDAEKELEREEKELKKLEEEL 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1034 QEKLRETQEYNRIQKELEREKASLTLSLMEKEQRllVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEK 1113
Cdd:PRK03918 629 DKAFEELAETEKRLEELRKELEELEKKYSEEEYE--ELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER 706
|
.
gi 2462579268 1114 E 1114
Cdd:PRK03918 707 E 707
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
462-740 |
9.63e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 9.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 462 SKERELLQKAREELRQQLEVLEQEawrlrrvnvelqlqgdsaqgqkeeqqeelhlavrererlqemLMGLEAKQSESLSE 541
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKE------------------------------------------LAALKKEEKALLKQ 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 542 LITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALAldkvglnqqLLQ 621
Cdd:COG4942 57 LAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLAL---------LLS 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 622 LEEENQSVcSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 701
Cdd:COG4942 128 PEDFLDAV-RRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEK 206
|
250 260 270
....*....|....*....|....*....|....*....
gi 2462579268 702 QQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAA 740
Cdd:COG4942 207 ELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
380-907 |
1.07e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.06 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 380 DYQDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAG---------- 449
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKevkeleelke 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 450 -------QTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVN------VELQLQGDSAQGQKEEQQEELHL 516
Cdd:PRK03918 239 eieelekELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKekaeeyIKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 517 AVRERERLQEMLMGLEAKQSE------SLSELITLREALESSHLEGELLRQEQT---------------EVTAALARAEQ 575
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERleelkkKLKELEKRLEELEERHELYEEAKAKKEelerlkkrltgltpeKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 576 SIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARnaLQVDLAEAEKRRE 655
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKR--IEKELKEIEEKER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 656 ALWEKNTHLEAQLQKAEEAGAelqadLRDIQEEKEEIQKKLSESRHQQ-EAATTQLEQLHQEA---KRQEEVLARAVQEK 731
Cdd:PRK03918 477 KLRKELRELEKVLKKESELIK-----LKELAEQLKELEEKLKKYNLEElEKKAEEYEKLKEKLiklKGEIKSLKKELEKL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 732 EALVREKAALEVRLQAVERDRQDLAEQLQ--GLSSAKELlesslfeaqqqnsviEVTKGQLEVQIQTVTQAKEVIQgEVR 809
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEelGFESVEEL---------------EERLKELEPFYNEYLELKDAEK-ELE 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 810 CLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKaLESLEREKMELEM 889
Cdd:PRK03918 616 REEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAE-LEELEKRREEIKK 694
|
570
....*....|....*...
gi 2462579268 890 RLKEQQTEMEAIQAQREE 907
Cdd:PRK03918 695 TLEKLKEELEEREKAKKE 712
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
553-926 |
1.15e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.95 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 553 HLEGELL--RQEQTEVTAALARAEQSIAELSSSENTLKTevaDLRAAAVKLSALNEALALdkvglNQQLLQLEEENQSVC 630
Cdd:COG3096 289 ELRRELFgaRRQLAEEQYRLVEMARELEELSARESDLEQ---DYQAASDHLNLVQTALRQ-----QEKIERYQEDLEELT 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 631 SRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQL-----------------QKAEEAGAELQADLRDIQEEKEEIQ 693
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLadyqqaldvqqtraiqyQQAVQALEKARALCGLPDLTPENAE 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 694 KKLSESRHQQEAATTQLEQLHQ------EAKRQEEVLARAVQEKEALVREKAALEVRLQAVE--RDRQDLAEQLQGLssa 765
Cdd:COG3096 441 DYLAAFRAKEQQATEEVLELEQklsvadAARRQFEKAYELVCKIAGEVERSQAWQTARELLRryRSQQALAQRLQQL--- 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 766 kellESSLFEAQQQnsvievtkgqLEVQIQTVTQAKEVIQGEVRCL--KLELDTERSQAEQERDAAARQLAQAeQEGKTA 843
Cdd:COG3096 518 ----RAQLAELEQR----------LRQQQNAERLLEEFCQRIGQQLdaAEELEELLAELEAQLEELEEQAAEA-VEQRSE 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 844 LEQQKAAHEKEVNQLRekwEKERSWHqqelaKALESLEREKMELEMRLKEQQTEMEAIQ--AQREEERTQAESALCQMQL 921
Cdd:COG3096 583 LRQQLEQLRARIKELA---ARAPAWL-----AAQDALERLREQSGEALADSQEVTAAMQqlLEREREATVERDELAARKQ 654
|
....*
gi 2462579268 922 ETEKE 926
Cdd:COG3096 655 ALESQ 659
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
621-1124 |
1.25e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 621 QLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQ-------LQKAEEAGAELQADLRDIQEE----K 689
Cdd:TIGR04523 37 QLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQikdlndkLKKNKDKINKLNSDLSKINSEikndK 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 690 EEIQKK---LSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSS-- 764
Cdd:TIGR04523 117 EQKNKLeveLNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNkl 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 765 -AKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLEL---DTERSQAEQERDAAARQLAQAEQEG 840
Cdd:TIGR04523 197 lKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEIsntQTQLNQLKDEQNKIKKQLSEKQKEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 841 KTAlEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESlerekmelemRLKEQQTEMEAIQAQREEErTQAESALCQMQ 920
Cdd:TIGR04523 277 EQN-NKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKS----------ELKNQEKKLEEIQNQISQN-NKIISQLNEQI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 921 LETEKERVSLLETLLQTQKELADASQQLERLR--QDMKVQKLKEQET-TGILQTQLQEAQRELKEaarqhrddlaaLQEE 997
Cdd:TIGR04523 345 SQLKKELTNSESENSEKQRELEEKQNEIEKLKkeNQSYKQEIKNLESqINDLESKIQNQEKLNQQ-----------KDEQ 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 998 SSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSI 1077
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 2462579268 1078 RQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQL 1124
Cdd:TIGR04523 494 KEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
229-485 |
1.53e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.68 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 229 SREPNGSGRMDGREPAQLLLLLAKTQELEKEAHERSQELiqlksqgdlekAELQDRVTELSALLTQSQKQNEDYEKMIKA 308
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL-----------RRIENRLDELSQELSDASRKIGEIEKEIEQ 727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 309 LRETVEILETNHTELMEHEASLSRNAQEEKLSLQQVIKDITQVMVEegdnIAQGSGHENSLE--LDSSIFSQFD--YQDA 384
Cdd:TIGR02169 728 LEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEED----LHKLEEALNDLEarLSHSRIPEIQaeLSKL 803
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 385 DKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKE 464
Cdd:TIGR02169 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR 883
|
250 260
....*....|....*....|.
gi 2462579268 465 RELLQKAREELRQQLEVLEQE 485
Cdd:TIGR02169 884 LGDLKKERDELEAQLRELERK 904
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
857-1033 |
1.55e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 857 QLREKWEKERSWhqQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERvslLETLLQ 936
Cdd:COG4717 79 ELKEAEEKEEEY--AELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPER---LEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 937 TQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLK 1016
Cdd:COG4717 154 RLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLE 233
|
170
....*....|....*..
gi 2462579268 1017 SQLVAQDDSQRLVEQEV 1033
Cdd:COG4717 234 NELEAAALEERLKEARL 250
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
250-942 |
1.74e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.57 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 250 LAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRE----------TVEILETN 319
Cdd:PRK04863 364 LEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERakqlcglpdlTADNAEDW 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 320 HTELM--EHEASLSRNAQEEKLSLQQVIKDItqvmveegdniaqgsgHENSLELDSSIFSQFDYQDA-DKALTLVRSVLT 396
Cdd:PRK04863 444 LEEFQakEQEATEELLSLEQKLSVAQAAHSQ----------------FEQAYQLVRKIAGEVSRSEAwDVARELLRRLRE 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 397 RRRQA--VQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQkltgERDTLAGQTVDLQGEVDSLSKERELLQKAREE 474
Cdd:PRK04863 508 QRHLAeqLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLD----DEDELEQLQEELEARLESLSESVSEARERRMA 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 475 LRQQLEVLEQEAWRLRRVNVE-LQLQ----------GDSAQGQKEEQQEELHLAVRERE-------------RLQEMLMG 530
Cdd:PRK04863 584 LRQQLEQLQARIQRLAARAPAwLAAQdalarlreqsGEEFEDSQDVTEYMQQLLEREREltverdelaarkqALDEEIER 663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 531 LEAKQSESLSELITLREalessHLEGELLR--------QEQTEVTAALARAEQSIAelsssentlkteVADLRAAAVKLS 602
Cdd:PRK04863 664 LSQPGGSEDPRLNALAE-----RFGGVLLSeiyddvslEDAPYFSALYGPARHAIV------------VPDLSDAAEQLA 726
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 603 ALNealaldkvGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKR-----------REALWEKNTHLEAQLQKA 671
Cdd:PRK04863 727 GLE--------DCPEDLYLIEGDPDSFDDSVFSVEELEKAVVVKIADRQWRysrfpevplfgRAAREKRIEQLRAEREEL 798
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 672 EEAGAELQADLRDIQ-------------------EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQ--- 729
Cdd:PRK04863 799 AERYATLSFDVQKLQrlhqafsrfigshlavafeADPEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSaln 878
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 730 ---------EKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLeSSLFEAQQQNSVIEVTKGQLEVQIQTVTQA 800
Cdd:PRK04863 879 rllprlnllADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQLEPIV-SVLQSDPEQFEQLKQDYQQAQQTQRDAKQQ 957
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 801 ----KEVIQ--------------GEVRCLKLELDTERSQAEQERDAAARQLAQAEQEgktaleqqkaahEKEVNQLREKW 862
Cdd:PRK04863 958 afalTEVVQrrahfsyedaaemlAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQ------------LAQYNQVLASL 1025
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 863 EKERSWHQQELAKALESLE----REKMELEMRLKEQQTEMEAIQAQREEERTQAESAL--CQMQLETEKERVSLLETLLQ 936
Cdd:PRK04863 1026 KSSYDAKRQMLQELKQELQdlgvPADSGAEERARARRDELHARLSANRSRRNQLEKQLtfCEAEMDNLTKKLRKLERDYH 1105
|
....*.
gi 2462579268 937 TQKELA 942
Cdd:PRK04863 1106 EMREQV 1111
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
831-1057 |
2.37e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 831 RQLAQAEQEGKTALEQQKAahekeVNQLREKWEKerswhQQELAKALESLEREKMELemRLKEQQTEMEAIQAQREEERT 910
Cdd:COG4913 235 DDLERAHEALEDAREQIEL-----LEPIRELAER-----YAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 911 QAESALCQMQlETEKERVSLLETLLQTQKELADAS-QQLERLRQDMKVQKLKEQETTGILQtQLQEAQRELKEAARQHRD 989
Cdd:COG4913 303 ELARLEAELE-RLEARLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERERRRA-RLEALLAALGLPLPASAE 380
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 990 DLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQddsqrlvEQEVQEKLREtqeynriqkeLEREKASL 1057
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAA-------LRDLRRELRE----------LEAEIASL 431
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
664-1169 |
2.59e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.88 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 664 LEAQLQKAEEAgaELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLaravQEKEALVREKAALEV 743
Cdd:PRK02224 192 LKAQIEEKEEK--DLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR----EELETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 744 RLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAE 823
Cdd:PRK02224 266 TIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 824 QERDAAARQLAQAEQegktaLEQQKAAHEKEVNQLREKWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQA 903
Cdd:PRK02224 346 SLREDADDLEERAEE-----LREEAAELESELEEAREAVEDRRE-EIEELEEEIEELRERFGDAPVDLGNAEDFLEELRE 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 904 QREEERtqaesalcqmqletekERVSLLETLLQTqkeLADASQQLERLRQDMKVQKLkEQETTGILQTQLQEAQRELKEA 983
Cdd:PRK02224 420 ERDELR----------------EREAELEATLRT---ARERVEEAEALLEAGKCPEC-GQPVEGSPHVETIEEDRERVEE 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 984 ARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEvqeklRETQEYNRIQKELEREKAsltlslme 1063
Cdd:PRK02224 480 LEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAER-----RETIEEKRERAEELRERA-------- 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1064 keqrllvlQEADSIRQQELSALRQDMQEAQGEQKELsAQMELLRQEVKEkEADFLAQEAQLLEELEASHITEQQLRASLW 1143
Cdd:PRK02224 547 --------AELEAEAEEKREAAAEAEEEAEEAREEV-AELNSKLAELKE-RIESLERIRTLLAAIADAEDEIERLREKRE 616
|
490 500
....*....|....*....|....*.
gi 2462579268 1144 AQEAKAAQLQLRLRSTESQLEALAAE 1169
Cdd:PRK02224 617 ALAELNDERRERLAEKRERKRELEAE 642
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
709-1169 |
2.70e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.58 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 709 QLEQLHQEAKRQEEVLARAVQEK-EALVREKaalEVRLQAVERDRQDLAEQLQGLSSAKELLESslfEAQQQNSV----- 782
Cdd:pfam15921 246 QLEALKSESQNKIELLLQQHQDRiEQLISEH---EVEITGLTEKASSARSQANSIQSQLEIIQE---QARNQNSMymrql 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 783 --IEVTKGQLEVQIQtvtQAKEVIQGEVRCLKLEL---DTERSQAEQERDAAARQLAQAEQEGKTALEQqkaAHEKEVNQ 857
Cdd:pfam15921 320 sdLESTVSQLRSELR---EAKRMYEDKIEELEKQLvlaNSELTEARTERDQFSQESGNLDDQLQKLLAD---LHKREKEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 858 LREKWEKERSWhQQELAKALeSLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEK-ERVSLLETLLQ 936
Cdd:pfam15921 394 SLEKEQNKRLW-DRDTGNSI-TIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESlEKVSSLTAQLE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 937 TQKELadasqqLERLRQDMKVQKL---KEQETTGILQTQLQEAQRELKEAARQ-----HRDDLAALQEESSSLLQDKM-D 1007
Cdd:pfam15921 472 STKEM------LRKVVEELTAKKMtleSSERTVSDLTASLQEKERAIEATNAEitklrSRVDLKLQELQHLKNEGDHLrN 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1008 LQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLT----------------------------- 1058
Cdd:pfam15921 546 VQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEkeindrrlelqefkilkdkkdakirelea 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1059 -LSLMEKEQRLLVLQEADSIR-----QQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASH 1132
Cdd:pfam15921 626 rVSDLELEKVKLVNAGSERLRavkdiKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQ 705
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 2462579268 1133 ITEQQLRASLWAQEAK-------AAQLQLRLRSTESQLEALAAE 1169
Cdd:pfam15921 706 SELEQTRNTLKSMEGSdghamkvAMGMQKQITAKRGQIDALQSK 749
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
397-1160 |
3.53e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.41 E-value: 3.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 397 RRRQAVQDLRQQLAGCQEAVNLLQQQHdqweeegKALRQRLQKLTGERDTLagqTVDLQGEVDSLSKERELLQKAREELR 476
Cdd:COG3096 282 ELSERALELRRELFGARRQLAEEQYRL-------VEMARELEELSARESDL---EQDYQAASDHLNLVQTALRQQEKIER 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 477 QQLEVLEQEAwRLRrvnvELQLQGDSAQGQKEEQQEELHLAVRERERLQEML----MGLEAKQSESLS---ELITLREAL 549
Cdd:COG3096 352 YQEDLEELTE-RLE----EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLadyqQALDVQQTRAIQyqqAVQALEKAR 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 550 ESSHLEGelLRQEQTEVTAALARAEQSiaELSSSENTLKTEVADLRAAAVKLSALNEALAL--------DKVGLNQQLLQ 621
Cdd:COG3096 427 ALCGLPD--LTPENAEDYLAAFRAKEQ--QATEEVLELEQKLSVADAARRQFEKAYELVCKiageversQAWQTARELLR 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 622 LEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAG---AELQADLRDIQEEKEEIQKKLSE 698
Cdd:COG3096 503 RYRSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEellAELEAQLEELEEQAAEAVEQRSE 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 699 SRHQQEAATTQLEQLHQEA----------KRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGL-SSAKE 767
Cdd:COG3096 583 LRQQLEQLRARIKELAARApawlaaqdalERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARKQALeSQIER 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 768 LLESSLFEAQQQNSVIEVTKGQLEVQIQ---TVTQAK--EVIQGEVRCLKLELDTERSQA---------------EQERD 827
Cdd:COG3096 663 LSQPGGAEDPRLLALAERLGGVLLSEIYddvTLEDAPyfSALYGPARHAIVVPDLSAVKEqlagledcpedlyliEGDPD 742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 828 AAARQLAQAEQEGKTALEQQ-----------------KAAHEKEVNQLREKWEK------ERSWHQQELAKALESLER-- 882
Cdd:COG3096 743 SFDDSVFDAEELEDAVVVKLsdrqwrysrfpevplfgRAAREKRLEELRAERDElaeqyaKASFDVQKLQRLHQAFSQfv 822
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 883 ---------EKMELEMR-LKEQQTEMEAIQAQREEERTQAESALCQMqleteKERVSLLETLLQTQKELADAS--QQLER 950
Cdd:COG3096 823 gghlavafaPDPEAELAaLRQRRSELERELAQHRAQEQQLRQQLDQL-----KEQLQLLNKLLPQANLLADETlaDRLEE 897
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 951 LRQDMkvqklkeqettgilqTQLQEAQRELK---EAARQHRDDLAALQ---EESSSLLQDKMDLQKQVEDLKSQLVA--- 1021
Cdd:COG3096 898 LREEL---------------DAAQEAQAFIQqhgKALAQLEPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIFAlse 962
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1022 ----------QDDSQRLVE-QEVQEKLRETQEynriQKELEREKASLTLSLMEKE--QRLLVLQEADSIRQqelsALRQD 1088
Cdd:COG3096 963 vvqrrphfsyEDAVGLLGEnSDLNEKLRARLE----QAEEARREAREQLRQAQAQysQYNQVLASLKSSRD----AKQQT 1034
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579268 1089 MQEAQGEQKELSAQMEllrqevKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTE 1160
Cdd:COG3096 1035 LQELEQELEELGVQAD------AEAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAE 1100
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
687-1060 |
3.75e-05 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 47.75 E-value: 3.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 687 EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAK 766
Cdd:pfam19220 20 EDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAAL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 767 ELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLEL---DTERSQAEQERDAAARQLAQAEQEGKta 843
Cdd:pfam19220 100 REAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAqaaEKALQRAEGELATARERLALLEQENR-- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 844 leQQKAAHEKEVNQLREKWEKerswhQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERT--QAESALCQMQL 921
Cdd:pfam19220 178 --RLQALSEEQAAELAELTRR-----LAELETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEahRAERASLRMKL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 922 ETEKERVSLLETLLQ----TQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQhRDDLAALQEE 997
Cdd:pfam19220 251 EALTARAAATEQLLAearnQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQFQEMQRA-RAELEERAEM 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 998 SSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEynRIQKELEREKASLTLS 1060
Cdd:pfam19220 330 LTKALAAKDAALERAEERIASLSDRIAELTKRFEVERAALEQANR--RLKEELQRERAERALA 390
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
685-963 |
3.88e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.20 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 685 IQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEvlaravQEKEALVREKAALEVRLQAVERDRQDLAEQ--LQGL 762
Cdd:pfam17380 301 LRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAE------QERMAMERERELERIRQEERKRELERIRQEeiAMEI 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 763 SSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQER---DAAARQLAQAEQE 839
Cdd:pfam17380 375 SRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRrleEERAREMERVRLE 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 840 GKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALES--LEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALC 917
Cdd:pfam17380 455 EQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkiLEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEER 534
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2462579268 918 QMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQ 963
Cdd:pfam17380 535 RREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQ 580
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
572-784 |
3.97e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.09 E-value: 3.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 572 RAEQSIAELSSSENTLKTEVADLRAaavKLSALNEALAldKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAE 651
Cdd:COG3206 165 NLELRREEARKALEFLEEQLPELRK---ELEEAEAALE--EFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 652 KRREALWEKN----------------THLEAQLQKAEEAGAELQADLRD----IQEEKEEIQKKLSESRHQQEAATTQLE 711
Cdd:COG3206 240 ARLAALRAQLgsgpdalpellqspviQQLRAQLAELEAELAELSARYTPnhpdVIALRAQIAALRAQLQQEAQRILASLE 319
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 712 QLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIE 784
Cdd:COG3206 320 AELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVRVID 392
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
623-1138 |
4.34e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.86 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 623 EEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQ-------KAEEAGAELQADLRDIQEEKEEIQKK 695
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQaetelcaEAEEMRARLAARKQELEEILHELESR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 696 LSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFE 775
Cdd:pfam01576 84 LEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 776 AQQQ-NSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTA-LEQQKAAHEK 853
Cdd:pfam01576 164 FTSNlAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAeLRAQLAKKEE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 854 EVNQLREKWEKERSWHQQELAKAleslerekMELEMRLKEQQTEMEAIQAQREeertQAESALCQMQLETEKERVSLLET 933
Cdd:pfam01576 244 ELQAALARLEEETAQKNNALKKI--------RELEAQISELQEDLESERAARN----KAEKQRRDLGEELEALKTELEDT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 934 LLQTqkeladASQQLERLRQDMKVQKLKE--QETTGILQTQLQE-------AQRELKEAARQHRDDLAALQEESSSLLQD 1004
Cdd:pfam01576 312 LDTT------AAQQELRSKREQEVTELKKalEEETRSHEAQLQEmrqkhtqALEELTEQLEQAKRNKANLEKAKQALESE 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1005 KMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSA 1084
Cdd:pfam01576 386 NAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSS 465
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 1085 LRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQL 1138
Cdd:pfam01576 466 LESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQL 519
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
741-996 |
4.43e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.70 E-value: 4.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 741 LEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIevtkgQLEVQIQTVTQAKEviqgevrclklELDTERS 820
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLV-----DLSEEAKLLLQQLS-----------ELESQLA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 821 QAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQlrekwekerswhqqELAKALESLEREKMELEMRLKEQQTEMEA 900
Cdd:COG3206 230 EARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQ--------------QLRAQLAELEAELAELSARYTPNHPDVIA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 901 IQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQdmkvqklkeqettgiLQTQLQEAQREL 980
Cdd:COG3206 296 LRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE---------------LEAELRRLEREV 360
|
250
....*....|....*.
gi 2462579268 981 KEAARQHRDDLAALQE 996
Cdd:COG3206 361 EVARELYESLLQRLEE 376
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
620-1202 |
4.99e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.66 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 620 LQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGaELQADLRDIQEEKEEIQKKLSES 699
Cdd:TIGR00618 208 LCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLK-QLRARIEELRAQEAVLEETQERI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 700 RHQQEAATTQLEQLHQEAKRQEevLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQ 779
Cdd:TIGR00618 287 NRARKAAPLAAHIKAVTQIEQQ--AQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVA 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 780 NSVIEVTKGQLEVQ--IQTVTQAKEVIQGEVRCLKLELDTERSQAEQE--RDAAARQLAQ--AEQEGKTALEQQKAAHEK 853
Cdd:TIGR00618 365 TSIREISCQQHTLTqhIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtRTSAFRDLQGqlAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 854 EVNQLREKWEKERSWHQQELAKALESLEREKMELEMrLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLET 933
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQ-IHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNP 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 934 LLQTQKeladasqqLERLRQDMKVQKLKEQETTGILQTQLQEAQReLKEAARQHRDDLAALQEESSSLLQDKMDLQKQVE 1013
Cdd:TIGR00618 524 GPLTRR--------MQRGEQTYAQLETSEEDVYHQLTSERKQRAS-LKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITV 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1014 DLKSQLVAQDDSQRLVEQEVQEKLRETQEynriqkelEREKASLTLSLMEKEQRLlvlqeadsirQQELSALRQDmqeaq 1093
Cdd:TIGR00618 595 RLQDLTEKLSEAEDMLACEQHALLRKLQP--------EQDLQDVRLHLQQCSQEL----------ALKLTALHAL----- 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1094 geqkelsaQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPG 1173
Cdd:TIGR00618 652 --------QLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEI 723
|
570 580 590
....*....|....*....|....*....|.
gi 2462579268 1174 NQAQAQAQLASLY--SALQQALGSVCESRPE 1202
Cdd:TIGR00618 724 ENASSSLGSDLAAreDALNQSLKELMHQART 754
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
720-950 |
5.08e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 5.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 720 QEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQ 799
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 800 AKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGkTALEQQKAAHEKEVNQLREKwekerswhQQELAKALES 879
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRL-QYLKYLAPARREQAEELRAD--------LAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462579268 880 LEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAlcQMQLETEKERvslLETLLQTQKELADASQQLER 950
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKLLARL--EKELAELAAE---LAELQQEAEELEALIARLEA 234
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
664-805 |
5.17e-05 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 47.51 E-value: 5.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 664 LEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsrhQQEAATTQLEQLHQEAKrqeEVLARAVQEKEALVREKAALEv 743
Cdd:PRK00409 525 LEELERELEQKAEEAEALLKEAEKLKEELEEKKEK---LQEEEDKLLEEAEKEAQ---QAIKEAKKEADEIIKELRQLQ- 597
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579268 744 RLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVtkGQlEVQIQTVTQAKEVIQ 805
Cdd:PRK00409 598 KGGYASVKAHELIEARKRLNKANEKKEKKKKKQKEKQEELKV--GD-EVKYLSLGQKGEVLS 656
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
98-832 |
5.97e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.42 E-value: 5.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 98 ELLVRLEEEQQRCESLAEVntQLRLHMEKADVVNKaLREDVEKLtvDWSRARDELMRKESQWQMEQefFKGYLKGEHGRL 177
Cdd:pfam15921 114 DLQTKLQEMQMERDAMADI--RRRESQSQEDLRNQ-LQNTVHEL--EAAKCLKEDMLEDSNTQIEQ--LRKMMLSHEGVL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 178 LSLWREVVTFRR---------------HFLEMKSATDRDLMELKAEHVRLSGSLLTCCLRLtvgaQSREPNGSGRMDgre 242
Cdd:pfam15921 187 QEIRSILVDFEEasgkkiyehdsmstmHFRSLGSAISKILRELDTEISYLKGRIFPVEDQL----EALKSESQNKIE--- 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 243 paqlLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETnhtE 322
Cdd:pfam15921 260 ----LLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRS---E 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 323 LMEHEASLSRNAQEEKLSLQQVIKDITQVMVEEgDNIAQGSGHensleLDSSIFSQF-DYQDADKALTLvrsvltrRRQA 401
Cdd:pfam15921 333 LREAKRMYEDKIEELEKQLVLANSELTEARTER-DQFSQESGN-----LDDQLQKLLaDLHKREKELSL-------EKEQ 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 402 VQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGE-RDTLAGQTVDLQGEVDSLSK----------ERELLQK 470
Cdd:pfam15921 400 NKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcQGQMERQMAAIQGKNESLEKvssltaqlesTKEMLRK 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 471 AREELRQQLEVLEQEAWRLRRVNVELQlqgDSAQGQKEEQQEELHLAVRERERLQEM--LMGLEAKQSESLSELITLREA 548
Cdd:pfam15921 480 VVEELTAKKMTLESSERTVSDLTASLQ---EKERAIEATNAEITKLRSRVDLKLQELqhLKNEGDHLRNVQTECEALKLQ 556
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 549 LESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQS 628
Cdd:pfam15921 557 MAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVK 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 629 VCSrmEAAEQARNalqvdLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLsesRHQQEAATT 708
Cdd:pfam15921 637 LVN--AGSERLRA-----VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKL---KMQLKSAQS 706
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 709 QLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKG 788
Cdd:pfam15921 707 ELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKN 786
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 2462579268 789 QLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQ 832
Cdd:pfam15921 787 KMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQ 830
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
648-1040 |
6.18e-05 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 47.32 E-value: 6.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 648 AEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLrdiqeekEEIQKKLSESRHQQEAA-TTQLEQLHQEAKRQEEVLaR 726
Cdd:NF033838 37 AEEVRGGNNPTVTSSGNESQKEHAKEVESHLEKIL-------SEIQKSLDKRKHTQNVAlNKKLSDIKTEYLYELNVL-K 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 727 AVQEKEALVREKAALEVrlqAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQnsvievtKGQLEVQIQTVTQAK---EV 803
Cdd:NF033838 109 EKSEAELTSKTKKELDA---AFEQFKKDTLEPGKKVAEATKKVEEAEKKAKDQ-------KEEDRRNYPTNTYKTlelEI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 804 IQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTAleqqKAAHEKEVNQLREKWEKE-RSWHQQELAKALESL-- 880
Cdd:NF033838 179 AESDVEVKKAELELVKEEAKEPRDEEKIKQAKAKVESKKA----EATRLEKIKTDREKAEEEaKRRADAKLKEAVEKNva 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 881 EREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQmqlETekervsLLETLLQTQKELADASQQLERLRQDMKVQKL 960
Cdd:NF033838 255 TSEQDKPKRRAKRGVLGEPATPDKKENDAKSSDSSVGE---ET------LPSPSLKPEKKVAEAEKKVEEAKKKAKDQKE 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 961 KEQE-----TTGILQTQLQEAQRELKEA--------ARQHRDD--LAALQEESSSLLQDKMDLQKQVEDLKSqlvAQDDS 1025
Cdd:NF033838 326 EDRRnyptnTYKTLELEIAESDVKVKEAelelvkeeAKEPRNEekIKQAKAKVESKKAEATRLEKIKTDRKK---AEEEA 402
|
410
....*....|....*..
gi 2462579268 1026 QRLVEQE--VQEKLRET 1040
Cdd:NF033838 403 KRKAAEEdkVKEKPAEQ 419
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
291-779 |
6.54e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 6.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 291 LLTQSQKQNEDYEKMIKALRETVEILETNHTELMEHEASLSRN-----------AQEEKLSLQQVIKDITQvMVEEGDNI 359
Cdd:COG4913 253 LLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAeleelraelarLEAELERLEARLDALRE-ELDELEAQ 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 360 AQGSGHENSLELDSSIfsqfdyQDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQK 439
Cdd:COG4913 332 IRGNGGDRLEQLEREI------ERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEE 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 440 ltgERDTLAGQTVDLQGEVDSLSKERELLQK-----------AREELRQQLEV---------------LEQEAWRLrrvN 493
Cdd:COG4913 406 ---ALAEAEAALRDLRRELRELEAEIASLERrksniparllaLRDALAEALGLdeaelpfvgelievrPEEERWRG---A 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 494 VELQLQG--------DSAQGQKEEQQEELHLAVR---ERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQ- 561
Cdd:COG4913 480 IERVLGGfaltllvpPEHYAAALRWVNRLHLRGRlvyERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGRRf 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 562 --EQTEVTAALARAEQSI--AELSSSENTL---KTEVADLRA------AAVKLSALNEALAldkvGLNQQLLQLEEENQS 628
Cdd:COG4913 560 dyVCVDSPEELRRHPRAItrAGQVKGNGTRhekDDRRRIRSRyvlgfdNRAKLAALEAELA----ELEEELAEAEERLEA 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 629 VCSRMEAAEQARNALQ---------VDLAEAEKRREALWEKNTHLEA---QLQKAEEAGAELQADLRDIQEEKEEIQKKL 696
Cdd:COG4913 636 LEAELDALQERREALQrlaeyswdeIDVASAEREIAELEAELERLDAssdDLAALEEQLEELEAELEELEEELDELKGEI 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 697 SESRHQQEAATTQLEQLhqeAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEA 776
Cdd:COG4913 716 GRLEKELEQAEEELDEL---QDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERA 792
|
...
gi 2462579268 777 QQQ 779
Cdd:COG4913 793 MRA 795
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
817-1140 |
8.62e-05 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 46.45 E-value: 8.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 817 TERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQT 896
Cdd:pfam13868 22 KERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIEEREQKRQEEYEEKLQERE 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 897 EMEAIQAQREEERtqaesalcqmqletEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEA 976
Cdd:pfam13868 102 QMDEIVERIQEED--------------QAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEYLKEKAER 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 977 QRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKAS 1056
Cdd:pfam13868 168 EEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQAREEQIEL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1057 ltLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQ 1136
Cdd:pfam13868 248 --KERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERLREEEA 325
|
....
gi 2462579268 1137 QLRA 1140
Cdd:pfam13868 326 ERRE 329
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
427-1014 |
1.09e-04 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 46.72 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 427 EEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKEREL---LQKAREELRQQLEVLEQEAWRLRRVNV--------- 494
Cdd:PRK10246 215 PEQVQSLTASLQVLTDEEKQLLTAQQQQQQSLNWLTRLDELqqeASRRQQALQQALAAEEKAQPQLAALSLaqparqlrp 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 495 --ELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQT---EVTAA 569
Cdd:PRK10246 295 hwERIQEQSAALAHTRQQIEEVNTRLQSTMALRARIRHHAAKQSAELQAQQQSLNTWLAEHDRFRQWNNELAgwrAQFSQ 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 570 LARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVG----LNQQLLQLEEENQSVCSRMEAAEQARNALQV 645
Cdd:PRK10246 375 QTSDREQLRQWQQQLTHAEQKLNALPAITLTLTADEVAAALAQHAeqrpLRQRLVALHGQIVPQQKRLAQLQVAIQNVTQ 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 646 DLAEA----EKRREALWEKNTHL---------EAQLQKAEEAGAELQA---------------------DLRDIQEEKEE 691
Cdd:PRK10246 455 EQTQRnaalNEMRQRYKEKTQQLadvkticeqEARIKDLEAQRAQLQAgqpcplcgstshpaveayqalEPGVNQSRLDA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 692 IQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQglssAKELLES 771
Cdd:PRK10246 535 LEKEVKKLGEEGAALRGQLDALTKQLQRDESEAQSLRQEEQALTQQWQAVCASLNITLQPQDDIQPWLD----AQEEHER 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 772 SLFEAQQQNSVievtKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAA--------RQLAQAEQEGKTA 843
Cdd:PRK10246 611 QLRLLSQRHEL----QGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEASwlatrqqeAQSWQQRQNELTA 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 844 LEQQKAAHEKEVNQLREK-----------WEKERSWHQQ--ELAKALESLEREKMELEMRLKEQQTEME-AIQAQREEER 909
Cdd:PRK10246 687 LQNRIQQLTPLLETLPQSddlphseetvaLDNWRQVHEQclSLHSQLQTLQQQDVLEAQRLQKAQAQFDtALQASVFDDQ 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 910 TQAESALCQ----MQLETEKERvslLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAA- 984
Cdd:PRK10246 767 QAFLAALLDeetlTQLEQLKQN---LENQRQQAQTLVTQTAQALAQHQQHRPDGLDLTVTVEQIQQELAQLAQQLRENTt 843
|
650 660 670
....*....|....*....|....*....|....*
gi 2462579268 985 -----RQHRDDLAALQEESSSLLQDKMDLQKQVED 1014
Cdd:PRK10246 844 rqgeiRQQLKQDADNRQQQQALMQQIAQATQQVED 878
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
453-677 |
1.11e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 453 DLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLmgle 532
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL---- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 533 AKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAElsssenTLKTEVADLRAAAVKLSALNEALALDK 612
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAP------ARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579268 613 VGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAE 677
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
648-874 |
1.23e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 648 AEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVL--- 724
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELger 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 725 ARAVQEKEALVREKAALEV---------RLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQ 795
Cdd:COG3883 92 ARALYRSGGSVSYLDVLLGsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 796 TVTQAKEVIQGEVRclklELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELA 874
Cdd:COG3883 172 ELEAQQAEQEALLA----QLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASA 246
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
548-988 |
1.45e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 46.20 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 548 ALESSHLEGELLRQEQTEVTAALARAEQSIAE-LSSSENTLKTEVADLRAAAVKLSALNEALALDKvGLNQQLLQLEEEN 626
Cdd:PRK10929 17 AYAATAPDEKQITQELEQAKAAKTPAQAEIVEaLQSALNWLEERKGSLERAKQYQQVIDNFPKLSA-ELRQQLNNERDEP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 627 QSVCSRMEAAEQARNALQVDLAEAEKRRealweknthleaQLQKAEEAGAELQADLRDIQEEKEEIQKKLS--ESRHQ-Q 703
Cdd:PRK10929 96 RSVPPNMSTDALEQEILQVSSQLLEKSR------------QAQQEQDRAREISDSLSQLPQQQTEARRQLNeiERRLQtL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 704 EAATTQLEQLhQEAKRQEEVLARAVQEKEAlvrEKAALEVR-LQAVERDRQDLAE-QLQGLSSAKELLESSLFEAQQQNs 781
Cdd:PRK10929 164 GTPNTPLAQA-QLTALQAESAALKALVDEL---ELAQLSANnRQELARLRSELAKkRSQQLDAYLQALRNQLNSQRQRE- 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 782 vievTKGQLEVQIQTVTQAKEVIQGEVRCLKL--ELDTERSQAEQERDAAARQLAQAEQEgktaLEQQKAAhekeVNQLR 859
Cdd:PRK10929 239 ----AERALESTELLAEQSGDLPKSIVAQFKInrELSQALNQQAQRMDLIASQQRQAASQ----TLQVRQA----LNTLR 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 860 EK--WEKERSwhqqelakAL-ESLEREKMELEMRLKEQQ--TEMEAIQAQR---EE--ERTQAESALCQ---MQLETEKE 926
Cdd:PRK10929 307 EQsqWLGVSN--------ALgEALRAQVARLPEMPKPQQldTEMAQLRVQRlryEDllNKQPQLRQIRQadgQPLTAEQN 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 927 RVslLETLLQTQKELADA------SQQLErlrqdmkVQKLKeqettgILQTQLQEAQRELKEAArqHR 988
Cdd:PRK10929 379 RI--LDAQLRTQRELLNSllsggdTLILE-------LTKLK------VANSQLEDALKEVNEAT--HR 429
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
689-1146 |
1.46e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.26 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 689 KEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEkealvrekaaLEVRLQAVERDRQDLAEQLQGLSSAKEL 768
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVID----------LQTKLQEMQMERDAMADIRRRESQSQED 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 769 LESSL------FEAQQ--QNSVIEVTKGQLEvQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAA----RQLAQA 836
Cdd:pfam15921 143 LRNQLqntvheLEAAKclKEDMLEDSNTQIE-QLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMStmhfRSLGSA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 837 EQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKAlesLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAL 916
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELL---LQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 917 CQMQLETEKERvsllETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEaARQHRDDLAalqe 996
Cdd:pfam15921 299 SQLEIIQEQAR----NQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTE-ARTERDQFS---- 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 997 ESSSLLQDKmdLQKQVEDLKSQlvaqdDSQRLVEQEVQEKLRETQEYNRIQ-KELEREKASLTLSLMEKEQRLLVLQEAD 1075
Cdd:pfam15921 370 QESGNLDDQ--LQKLLADLHKR-----EKELSLEKEQNKRLWDRDTGNSITiDHLRRELDDRNMEVQRLEALLKAMKSEC 442
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462579268 1076 SIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQlleeLEASHITEQQLRASLWAQE 1146
Cdd:pfam15921 443 QGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMT----LESSERTVSDLTASLQEKE 509
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
892-1160 |
1.71e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.06 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 892 KEQQTEMEAIQAQREEErtqAESALCQMQLET-----------EKERVSLLETLLQTQKELADASQQLERLRQDMKVQKL 960
Cdd:PRK11281 39 ADVQAQLDALNKQKLLE---AEDKLVQQDLEQtlalldkidrqKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 961 KEQETTgilqtqlqeaqrelkeaarqhrdDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRET 1040
Cdd:PRK11281 116 ETLSTL-----------------------SLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1041 QEYNRIQKELEREKASLTLS---LMEKEQRLLVLQeaDSIRQQELSA--LRQDMQEAQ-----GEQKELSAQMELLRQEV 1110
Cdd:PRK11281 173 QQIRNLLKGGKVGGKALRPSqrvLLQAEQALLNAQ--NDLQRKSLEGntQLQDLLQKQrdyltARIQRLEHQLQLLQEAI 250
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 1111 KEKEadfLAQEAQLLEELEASHITEQQLRASLWAQEAkAAQLQLR---LRSTE 1160
Cdd:PRK11281 251 NSKR---LTLSEKTVQEAQSQDEAARIQANPLVAQEL-EINLQLSqrlLKATE 299
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
693-1051 |
1.72e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.88 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 693 QKKLSEsRHQQEaattQLEQLHQEAKRQE-EVLARAVQEKEALVREKAAlevRLQAVERDRQDLAEQLQ-GLSSAKELLE 770
Cdd:pfam17380 281 QKAVSE-RQQQE----KFEKMEQERLRQEkEEKAREVERRRKLEEAEKA---RQAEMDRQAAIYAEQERmAMERERELER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 771 SSLFEAQQQNSviEVTKGQLEVQIQTVTqakeviqgEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKaa 850
Cdd:pfam17380 353 IRQEERKRELE--RIRQEEIAMEISRMR--------ELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKV-- 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 851 hekEVNQLREKWEKERswhQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQaesalcQMQLETEKERVSL 930
Cdd:pfam17380 421 ---EMEQIRAEQEEAR---QREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRK------KLELEKEKRDRKR 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 931 LETLLQTQKEladasQQLERLRQDMkvqkLKEQETTGILQTQLQEAQRELKEAARQHrddlaalQEESSSLLQDKMDLQK 1010
Cdd:pfam17380 489 AEEQRRKILE-----KELEERKQAM----IEEERKRKLLEKEMEERQKAIYEEERRR-------EAEEERRKQQEMEERR 552
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2462579268 1011 QVEDlKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELE 1051
Cdd:pfam17380 553 RIQE-QMRKATEERSRLEAMEREREMMRQIVESEKARAEYE 592
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
1041-1143 |
2.10e-04 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 45.71 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1041 QEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADsirqQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQ 1120
Cdd:PRK11448 142 NLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQ----QELVALEGLAAELEEKQQELEAQLEQLQEKAAETSQERKQK 217
|
90 100 110
....*....|....*....|....*....|..
gi 2462579268 1121 EAQL---------LEELEASHITEQQLRASLW 1143
Cdd:PRK11448 218 RKEItdqaakrleLSEEETRILIDQQLRKAGW 249
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
518-886 |
2.43e-04 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 45.06 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 518 VRERERLQEMLMGLEAKQSESLSELITLREalESSHLEGELLRQEQtEVTAALARAEQSIAELSSSEntlkTEVADLRAA 597
Cdd:pfam19220 40 LRELPQAKSRLLELEALLAQERAAYGKLRR--ELAGLTRRLSAAEG-ELEELVARLAKLEAALREAE----AAKEELRIE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 598 AVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAE 677
Cdd:pfam19220 113 LRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 678 LQADLRDIQEEKEEIQKKLSEsrhqQEAATTQLEQLHQEAKRQ-EEVLARAVQEKEALVREKAALEVRLQAVERDRQDLA 756
Cdd:pfam19220 193 LTRRLAELETQLDATRARLRA----LEGQLAAEQAERERAEAQlEEAVEAHRAERASLRMKLEALTARAAATEQLLAEAR 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 757 EQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKeviqgevrclkLELDTERSQAEQERDAAARQLAQA 836
Cdd:pfam19220 269 NQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQF-----------QEMQRARAELEERAEMLTKALAAK 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2462579268 837 EQEGKTAlEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKME 886
Cdd:pfam19220 338 DAALERA-EERIASLSDRIAELTKRFEVERAALEQANRRLKEELQRERAE 386
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
846-1169 |
2.65e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 846 QQKAAHEKEVNQLREKWEKERSWHQqELAKALESLEREKMELEMRLKE----QQTEMEAIQAQREEERTQAESALCQMQL 921
Cdd:PRK04863 286 EEALELRRELYTSRRQLAAEQYRLV-EMARELAELNEAESDLEQDYQAasdhLNLVQTALRQQEKIERYQADLEELEERL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 922 ETEKERVSLL-ETLLQTQKELADASQQLERLRQDMK--VQKLKEQETTGIlqtQLQEAQRELKEAARQ-HRDDLAAlqee 997
Cdd:PRK04863 365 EEQNEVVEEAdEQQEENEARAEAAEEEVDELKSQLAdyQQALDVQQTRAI---QYQQAVQALERAKQLcGLPDLTA---- 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 998 sssllqdkmdlqKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYN-----------RIQKELEREKASltlslmEKEQ 1066
Cdd:PRK04863 438 ------------DNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHsqfeqayqlvrKIAGEVSRSEAW------DVAR 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1067 RLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEaqlleELEASHITEQQLRASLWAQE 1146
Cdd:PRK04863 500 ELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDED-----ELEQLQEELEARLESLSESV 574
|
330 340
....*....|....*....|...
gi 2462579268 1147 AKAAQLQLRLRSTESQLEALAAE 1169
Cdd:PRK04863 575 SEARERRMALRQQLEQLQARIQR 597
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
844-1070 |
2.73e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 844 LEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEmRLKEQQTEMEAIQaqreEERTQAESALCQ--MQL 921
Cdd:PHA02562 193 IQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIE-ELTDELLNLVMDI----EDPSAALNKLNTaaAKI 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 922 ETEKERVSLLETLLQTQKELADASQQLERlrQDMKVQKLKEQETTgiLQTQLQEAQrelkeaarQHRDDLAALQEESSSL 1001
Cdd:PHA02562 268 KSKIEQFQKVIKMYEKGGVCPTCTQQISE--GPDRITKIKDKLKE--LQHSLEKLD--------TAIDELEEIMDEFNEQ 335
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 1002 LQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQ----EKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLV 1070
Cdd:PHA02562 336 SKKLLELKNKISTNKQSLITLVDKAKKVKAAIEelqaEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIV 408
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
871-1143 |
2.92e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 45.29 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 871 QELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKErvSLLETLLQTQKELADASQQLER 950
Cdd:PRK11281 76 DRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQLESRLA--QTLDQLQNAQNDLAEYNSQLVS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 951 lrqdmkvqklkeqettgiLQTQLQEAQRELKEAARQhrddlaaLQEESSSLLQDKMDLQKQVEDLKSQLVAQddsQRLVE 1030
Cdd:PRK11281 154 ------------------LQTQPERAQAALYANSQR-------LQQIRNLLKGGKVGGKALRPSQRVLLQAE---QALLN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1031 QEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEAdsIRQQELSALRQDMQEAQGEQKELSAQM-ELLRQE 1109
Cdd:PRK11281 206 AQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLLQEA--INSKRLTLSEKTVQEAQSQDEAARIQAnPLVAQE 283
|
250 260 270
....*....|....*....|....*....|....*.
gi 2462579268 1110 --VKEKEADFLAQEAQLLEELeashiTEQQLRASLW 1143
Cdd:PRK11281 284 leINLQLSQRLLKATEKLNTL-----TQQNLRVKNW 314
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
622-913 |
3.11e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.51 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 622 LEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 701
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 702 QQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNS 781
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 782 VIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREK 861
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2462579268 862 WEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAE 913
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAA 320
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
445-713 |
4.17e-04 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 44.68 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 445 DTLAGQTVDLQgEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQlqgdsaqgqkeeqqeELHLAVRERERL 524
Cdd:COG0497 148 DAFAGLEELLE-EYREAYRAWRALKKELEELRADEAERARELDLLRFQLEELE---------------AAALQPGEEEEL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 525 QEmlmgleakQSESLSELITLREALESSHlegELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSAL 604
Cdd:COG0497 212 EE--------ERRRLSNAEKLREALQEAL---EALSGGEGGALDLLGQALRALERLAEYDPSLAELAERLESALIELEEA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 605 NEALA--LDKVGLNQQLLQLEEEnqsvcsRMEAAEQARNALQVDLAE----AEKRREALweknthleAQLQKAEEAGAEL 678
Cdd:COG0497 281 ASELRryLDSLEFDPERLEEVEE------RLALLRRLARKYGVTVEEllayAEELRAEL--------AELENSDERLEEL 346
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2462579268 679 QADLRDIQEEKEEIQKKLSESRHQ-----QEAATTQLEQL 713
Cdd:COG0497 347 EAELAEAEAELLEAAEKLSAARKKaakklEKAVTAELADL 386
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
255-771 |
4.37e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.67 E-value: 4.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 255 ELEKEAHERSQELIQLKSQGDLEKAELQdRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELMEHEASLSRNA 334
Cdd:PRK03918 204 EVLREINEISSELPELREELEKLEKEVK-ELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 335 QEEKlSLQQVIKDITQvMVEEGDNIAQGsghENSLELDSSIFSQfdyqdADKALTLVRSVLTRRRQAVQDLRQQLAGCQE 414
Cdd:PRK03918 283 KELK-ELKEKAEEYIK-LSEFYEEYLDE---LREIEKRLSRLEE-----EINGIEERIKELEEKEERLEELKKKLKELEK 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 415 AVNLLQQQHDQWEEeGKALRQRLQKLtgeRDTLAGQTVD-LQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVN 493
Cdd:PRK03918 353 RLEELEERHELYEE-AKAKKEELERL---KKRLTGLTPEkLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAI 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 494 VELQ------------LQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSE------SLSELITLREALES-SHL 554
Cdd:PRK03918 429 EELKkakgkcpvcgreLTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRElekvlkKESELIKLKELAEQlKEL 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 555 EGELLRQEQTEVTAALARAE---QSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQS--- 628
Cdd:PRK03918 509 EEKLKKYNLEELEKKAEEYEklkEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFEsve 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 629 -VCSRMEAAEQARNALqVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHqqeaat 707
Cdd:PRK03918 589 eLEERLKELEPFYNEY-LELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEY------ 661
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 708 tqlEQLHQEAKRQEEVLARAVQEKEalvrekaALEVRLQAVERDRQDLAEQLQGLSSAKELLES 771
Cdd:PRK03918 662 ---EELREEYLELSRELAGLRAELE-------ELEKRREEIKKTLEKLKEELEEREKAKKELEK 715
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
713-1127 |
4.40e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 4.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 713 LHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESslfEAQQQNSVIEVTKgQLEV 792
Cdd:PRK04863 291 LRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEK---IERYQADLEELEE-RLEE 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 793 QIQTVTQAKEViqgevrclKLELDTERSQAEQERDAAARQLAQAEQegktALE-QQKAAheKEVNQLREKWEKERSW--- 868
Cdd:PRK04863 367 QNEVVEEADEQ--------QEENEARAEAAEEEVDELKSQLADYQQ----ALDvQQTRA--IQYQQAVQALERAKQLcgl 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 869 ---HQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEeRTQAESALCQMQLETEKER-----VSLLETLlQTQKE 940
Cdd:PRK04863 433 pdlTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQ-FEQAYQLVRKIAGEVSRSEawdvaRELLRRL-REQRH 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 941 LADASQQLErlrqdmkvQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSsllqdkmDLQKQVEDLKSQlV 1020
Cdd:PRK04863 511 LAEQLQQLR--------MRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQE-------ELEARLESLSES-V 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1021 AQDDSQRLVEQEVQEKLREtqeynRIQKelerekasltlsLMEKEQRLLVLQEAdsirqqeLSALRQDMQEAQGEQKELS 1100
Cdd:PRK04863 575 SEARERRMALRQQLEQLQA-----RIQR------------LAARAPAWLAAQDA-------LARLREQSGEEFEDSQDVT 630
|
410 420
....*....|....*....|....*....
gi 2462579268 1101 AQM-ELLRQEVK-EKEADFLAQEAQLLEE 1127
Cdd:PRK04863 631 EYMqQLLERERElTVERDELAARKQALDE 659
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
555-852 |
4.51e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.12 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 555 EGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALdkvgLNQQLLQLEEENQSVCSRME 634
Cdd:COG4372 22 TGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQ----LEEELEELNEQLQAAQAELA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 635 AAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLH 714
Cdd:COG4372 98 QAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 715 QEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQI 794
Cdd:COG4372 178 EAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVIL 257
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 795 QTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHE 852
Cdd:COG4372 258 KEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALED 315
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
428-640 |
4.86e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 4.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 428 EEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQK 507
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 508 EEQQEEL--HLAVRERERLQEMLMGLEAKQS--ESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSS 583
Cdd:COG4942 100 EAQKEELaeLLRALYRLGRQPPLALLLSPEDflDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579268 584 ENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQAR 640
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
687-986 |
5.84e-04 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 43.75 E-value: 5.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 687 EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAK 766
Cdd:pfam13868 29 AEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIEEREQKRQEEYEEKLQEREQMDEIVE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 767 ELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVR---------CLKLELDTERSQAEQERDAAARQLAQAE 837
Cdd:pfam13868 109 RIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEReederileyLKEKAEREEEREAEREEIEEEKEREIAR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 838 QEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALC 917
Cdd:pfam13868 189 LRAQQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQAREEQIELKERRLAEEAEREEEEFERMLR 268
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 918 QMQLETEKERVSLLETLLQtQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQ 986
Cdd:pfam13868 269 KQAEDEEIEQEEAEKRRMK-RLEHRRELEKQIEEREEQRAAEREEELEEGERLREEEAERRERIEEERQ 336
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
789-1198 |
6.96e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 6.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 789 QLEVQIQTVTQAKEVIQGEVRCLK-----LELDTERSQAEQERDAAARQLAQAEQEGKT--ALEQQKAAHEKEVNQLREK 861
Cdd:COG4717 99 ELEEELEELEAELEELREELEKLEkllqlLPLYQELEALEAELAELPERLEELEERLEElrELEEELEELEAELAELQEE 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 862 WEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKEL 941
Cdd:COG4717 179 LEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAAL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 942 ADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQhrddlaalqEESSSLLQDKMDLQKQveDLKSQLVA 1021
Cdd:COG4717 259 LALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKE---------AEELQALPALEELEEE--ELEELLAA 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1022 QDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKE-QRLLVLQEADSIRQ-QELSALRQDMQEAQGEQKEL 1099
Cdd:COG4717 328 LGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEiAALLAEAGVEDEEElRAALEQAEEYQELKEELEEL 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1100 SAQMELLRQEVKEKEADFlaQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQL---EALAAEQQPGNQA 1176
Cdd:COG4717 408 EEQLEELLGELEELLEAL--DEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelaELLQELEELKAEL 485
|
410 420
....*....|....*....|..
gi 2462579268 1177 QAQAQLASLYSALQQALGSVCE 1198
Cdd:COG4717 486 RELAEEWAALKLALELLEEARE 507
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
969-1167 |
7.27e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 7.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 969 LQTQLQEAQRELKEAarqhRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQK 1048
Cdd:COG4372 43 LQEELEQLREELEQA----REELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELE 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1049 ELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEEL 1128
Cdd:COG4372 119 ELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEK 198
|
170 180 190
....*....|....*....|....*....|....*....
gi 2462579268 1129 EASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALA 1167
Cdd:COG4372 199 EEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSA 237
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
636-1148 |
7.29e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.96 E-value: 7.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 636 AEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAA-------TT 708
Cdd:pfam05557 32 LEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADArevisclKN 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 709 QLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKG 788
Cdd:pfam05557 112 ELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKN 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 789 QLEVQIQTVTQAKEVIQGEVRCLKL-ELDTERSQAEQERDAAARQLAQAE--QEGKTALEQQKAAHEKEVNQlrekWEKE 865
Cdd:pfam05557 192 SKSELARIPELEKELERLREHNKHLnENIENKLLLKEEVEDLKRKLEREEkyREEAATLELEKEKLEQELQS----WVKL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 866 RSWHQQELAKAlESLEREKMELEMR---LKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQT---QK 939
Cdd:pfam05557 268 AQDTGLNLRSP-EDLSRRIEQLQQReivLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVrrlQR 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 940 ELADASQQLERLRQDMKV--QKLKEQETTGILQTQLQEAQ---RELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVED 1014
Cdd:pfam05557 347 RVLLLTKERDGYRAILESydKELTMSNYSPQLLERIEEAEdmtQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQA 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1015 LKSQLVAQDDSQrlVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQG 1094
Cdd:pfam05557 427 LRQQESLADPSY--SKEEVDSLRRKLETLELERQRLREQKNELEMELERRCLQGDYDPKKTKVLHLSMNPAAEAYQQRKN 504
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 1095 EQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAK 1148
Cdd:pfam05557 505 QLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLDLRKELESAELK 558
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
670-994 |
8.28e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 43.69 E-value: 8.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 670 KAEEAGAelqADLRDIQEEKEEIQKKLSESRHQ-----QEAATTQLEQLHQEAKRQ--EEVLARAVQEKEALVREKAAle 742
Cdd:PLN03229 422 KKREAVK---TPVRELEGEVEKLKEQILKAKESsskpsELALNEMIEKLKKEIDLEytEAVIAMGLQERLENLREEFS-- 496
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 743 vrlqavERDRQD------LAEQLQGLssaKELLESSLFEAQQQNSVievtKGQLEVqIQTVTQAKEVIQGEVRCLKLELD 816
Cdd:PLN03229 497 ------KANSQDqlmhpvLMEKIEKL---KDEFNKRLSRAPNYLSL----KYKLDM-LNEFSRAKALSEKKSKAEKLKAE 562
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 817 TERSQAEQERDAAARQLAQAEqegKTALEQQKAAHEKEVNQ-LREKWEKERSWHQQELAKALESLEREKMELEMRLKE-- 893
Cdd:PLN03229 563 INKKFKEVMDRPEIKEKMEAL---KAEVASSGASSGDELDDdLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDta 639
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 894 QQTEMEAIQAQREEERTQAESALCQMQLETE-KERVSLL--ETLLQTQKELADASQQLERLRQdmkvqKLKEQETTGILQ 970
Cdd:PLN03229 640 EQTPPPNLQEKIESLNEEINKKIERVIRSSDlKSKIELLklEVAKASKTPDVTEKEKIEALEQ-----QIKQKIAEALNS 714
|
330 340
....*....|....*....|....
gi 2462579268 971 TQLQEAQRELKEAARQHRDDLAAL 994
Cdd:PLN03229 715 SELKEKFEELEAELAAARETAAES 738
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
399-1161 |
8.43e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 8.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 399 RQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKL--------TGERdtLAGQTVDLQGEVDSLSKE------ 464
Cdd:PRK04863 292 RRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAAsdhlnlvqTALR--QQEKIERYQADLEELEERleeqne 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 465 -RELLQKAREELRQQLEVLEQEAWRLRRVNVELQlqgdSAQGQKEEQQEELHLAVRERERLQEmLMGLEAKQSESLSELI 543
Cdd:PRK04863 370 vVEEADEQQEENEARAEAAEEEVDELKSQLADYQ----QALDVQQTRAIQYQQAVQALERAKQ-LCGLPDLTADNAEDWL 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 544 tlrealesshlegELLRQEQTEVTAALARAEQsiaELSSSENTlKTEVADLRAAAVKLSALNEALALDKVGlnQQLLQLE 623
Cdd:PRK04863 445 -------------EEFQAKEQEATEELLSLEQ---KLSVAQAA-HSQFEQAYQLVRKIAGEVSRSEAWDVA--RELLRRL 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 624 EENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAG---AELQADLRDIQEEKEEIQKKLSESR 700
Cdd:PRK04863 506 REQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEqlqEELEARLESLSESVSEARERRMALR 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 701 HQQEaattQLEQLHQEAKRQEEVLaRAVQEKEALVREK--AALEVRlQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQ 778
Cdd:PRK04863 586 QQLE----QLQARIQRLAARAPAW-LAAQDALARLREQsgEEFEDS-QDVTEYMQQLLERERELTVERDELAARKQALDE 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 779 QNSVIEVTKGQLEVQIQT----------------------------------------VTQAKEVIQGEVRCLKL----- 813
Cdd:PRK04863 660 EIERLSQPGGSEDPRLNAlaerfggvllseiyddvsledapyfsalygparhaivvpdLSDAAEQLAGLEDCPEDlylie 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 814 ----ELDTERSQAEQERDAAARQLAQAEQE----------GKTALEQQKAAHEKEVNQLREKWEKeRSWHQQELAKALES 879
Cdd:PRK04863 740 gdpdSFDDSVFSVEELEKAVVVKIADRQWRysrfpevplfGRAAREKRIEQLRAEREELAERYAT-LSFDVQKLQRLHQA 818
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 880 LER-----------EKMELEMRLKEQQ-TEMEAIQAQREEERTQAESalcqmQLETEKERVSLLETLLQTQKELADASQQ 947
Cdd:PRK04863 819 FSRfigshlavafeADPEAELRQLNRRrVELERALADHESQEQQQRS-----QLEQAKEGLSALNRLLPRLNLLADETLA 893
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 948 lERLRQDMKVQKLKEQETTGILQTQLQEAQRE-LKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLkSQLVAQ---- 1022
Cdd:PRK04863 894 -DRVEEIREQLDEAEEAKRFVQQHGNALAQLEpIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFAL-TEVVQRrahf 971
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1023 --DDSQRLV--EQEVQEKLRETQEynriQKELEREKASLTL-----SLMEKEQRLLVLQEADSIRQQELSALRQDMQeaq 1093
Cdd:PRK04863 972 syEDAAEMLakNSDLNEKLRQRLE----QAEQERTRAREQLrqaqaQLAQYNQVLASLKSSYDAKRQMLQELKQELQ--- 1044
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 1094 geqkelsaqmELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTES 1161
Cdd:PRK04863 1045 ----------DLGVPADSGAEERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLER 1102
|
|
| PTZ00491 |
PTZ00491 |
major vault protein; Provisional |
824-944 |
9.36e-04 |
|
major vault protein; Provisional
Pssm-ID: 240439 [Multi-domain] Cd Length: 850 Bit Score: 43.47 E-value: 9.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 824 QERDAAARQLAQA-EQEGKTALEQQKAAHEKEVNQLREKWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQ 902
Cdd:PTZ00491 662 KSQEAAARHQAELlEQEARGRLERQKMHDKAKAEEQRTKLLELQA-ESAAVESSGQSRAEALAEAEARLIEAEAEVEQAE 740
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2462579268 903 AQREEERTQAESALCQMQLETEKE---RVSLLETLLQTQKELADA 944
Cdd:PTZ00491 741 LRAKALRIEAEAELEKLRKRQELEleyEQAQNELEIAKAKELADI 785
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
502-699 |
1.23e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 502 SAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELS 581
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 582 SSENTLKTEVADLRAAAVKLSALN--------------------------------EALALDKVGLNQQLLQLEEENQSV 629
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPplalllspedfldavrrlqylkylaparreqaEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 630 CSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSES 699
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
588-772 |
1.34e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.08 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 588 KTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRrEALWEKNTHL--- 664
Cdd:PHA02562 212 GENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKV-IKMYEKGGVCptc 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 665 -------EAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAAT---TQLEQLHQ-------EAKRQEEVLARA 727
Cdd:PHA02562 291 tqqisegPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLelkNKISTNKQslitlvdKAKKVKAAIEEL 370
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2462579268 728 VQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESS 772
Cdd:PHA02562 371 QAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLKDS 415
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
617-760 |
1.40e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 617 QQLLQLeeenQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKL 696
Cdd:COG1579 7 RALLDL----QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQL 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462579268 697 SESR--HQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQ 760
Cdd:COG1579 83 GNVRnnKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD 148
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1023-1169 |
1.64e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.46 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1023 DDSQRLVEQEVQEKLRETQ-EYNRIQKELEREKASLTLSLMEKEQRLlvLQEADSIRqQELSALRQDMQEAQGEQKELSA 1101
Cdd:PRK12704 45 EEAKKEAEAIKKEALLEAKeEIHKLRNEFEKELRERRNELQKLEKRL--LQKEENLD-RKLELLEKREEELEKKEKELEQ 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 1102 QMEllrqEVKEKEADFLAQEAQLLEELEasHIteqqlrASLWAQEAKaaqlQLRLRSTESQLEALAAE 1169
Cdd:PRK12704 122 KQQ----ELEKKEEELEELIEEQLQELE--RI------SGLTAEEAK----EILLEKVEEEARHEAAV 173
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
627-1165 |
1.69e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.90 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 627 QSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLR----DIQEEKEEIQKKLSESRHQ 702
Cdd:pfam12128 237 MKIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRtlddQWKEKRDELNGELSAADAA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 703 QEAATTQLEQLHQEAKRQEEV---LARAVQEKEALVR-EKAALEVRLQAVERDRQDLAEQLQGLSSAKEllesslfeaQQ 778
Cdd:pfam12128 317 VAKDRSELEALEDQHGAFLDAdieTAAADQEQLPSWQsELENLEERLKALTGKHQDVTAKYNRRRSKIK---------EQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 779 QNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQL 858
Cdd:pfam12128 388 NNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 859 REKWEKERSWHQQELA-KALESLEREKMELEMRlKEQQTEMEAIQAQREEERtqaESALCQMQLETEKERVSLLETLlqt 937
Cdd:pfam12128 468 NFDERIERAREEQEAAnAEVERLQSELRQARKR-RDQASEALRQASRRLEER---QSALDELELQLFPQAGTLLHFL--- 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 938 QKELADASQQLERLRQdmkvqklKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKmdLQKQVEDLKS 1017
Cdd:pfam12128 541 RKEAPDWEQSIGKVIS-------PELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEE--LRERLDKAEE 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1018 QLVAQDDSQRLVEQEVQEklretqeynrIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQK 1097
Cdd:pfam12128 612 ALQSAREKQAAAEEQLVQ----------ANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSAN 681
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 1098 ELSAQMELLRQEVKEKEADFLaqEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEA 1165
Cdd:pfam12128 682 ERLNSLEAQLKQLDKKHQAWL--EEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKA 747
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
241-970 |
1.87e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 241 REPAQLLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNH 320
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSH 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 321 TELMEHeaslsRNAQEEKLSLQQVIKditQVMVEEGDNIAQGSGHENSLELDSSIFSQFDYQDADKALTLVRSVLTRRRQ 400
Cdd:TIGR00618 243 AYLTQK-----REAQEEQLKKQQLLK---QLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHT 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 401 AVQDLRQQLAGCQEAVNLLQQQHDQWEEEgkalRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREeLRQQLE 480
Cdd:TIGR00618 315 ELQSKMRSRAKLLMKRAAHVKQQSSIEEQ----RRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHT-LQQQKT 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 481 VLEQeawrlrrvnvelQLQGDSAQGQKEEQQEELHLAVRERER-LQEMLMGLEAKQSESLSELITLREALESSHlegell 559
Cdd:TIGR00618 390 TLTQ------------KLQSLCKELDILQREQATIDTRTSAFRdLQGQLAHAKKQQELQQRYAELCAAAITCTA------ 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 560 rQEQTEVTAALARAEQSIAELSSSENTLKT------EVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRM 633
Cdd:TIGR00618 452 -QCEKLEKIHLQESAQSLKEREQQLQTKEQihlqetRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRM 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 634 EAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQL 713
Cdd:TIGR00618 531 QRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDML 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 714 HQEAKRQEEVLARAvQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKgQLEVQ 793
Cdd:TIGR00618 611 ACEQHALLRKLQPE-QDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQ-KMQSE 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 794 IQTVTQAKEVI---QGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQ 870
Cdd:TIGR00618 689 KEQLTYWKEMLaqcQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNE 768
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 871 QELA-----KALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADAS 945
Cdd:TIGR00618 769 EVTAalqtgAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEIT 848
|
730 740
....*....|....*....|....*
gi 2462579268 946 QQLERLRQDMKVQKLKEQETTGILQ 970
Cdd:TIGR00618 849 HQLLKYEECSKQLAQLTQEQAKIIQ 873
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
785-952 |
1.98e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 41.96 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 785 VTKGQLEVQIQTVtqakeviqgevrclklELDTERSQAEQERDAAARQLAQAEQEgkTALEQQKAAHEKEVNQLREKWEK 864
Cdd:COG1566 67 VKKGQVLARLDPT----------------DLQAALAQAEAQLAAAEAQLARLEAE--LGAEAEIAAAEAQLAAAQAQLDL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 865 erswhQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAlcQMQLETEKERVSLLETLLQTQKELADA 944
Cdd:COG1566 129 -----AQRELERYQALYKKGAVSQQELDEARAALDAAQAQLEAAQAQLAQA--QAGLREEEELAAAQAQVAQAEAALAQA 201
|
....*...
gi 2462579268 945 SQQLERLR 952
Cdd:COG1566 202 ELNLARTT 209
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
395-771 |
1.98e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 395 LTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQ--RLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAR 472
Cdd:COG4717 83 AEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELAELPERLEELEERLEELRELE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 473 EELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHlavRERERLQEMLMGLEAKQSESLSELITLREALESS 552
Cdd:COG4717 163 EELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQ---QRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 553 HLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAV--------------------------------- 599
Cdd:COG4717 240 ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLallflllarekaslgkeaeelqalpaleeleee 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 600 KLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEkRREALWEKNTHLEAQLQKAEEAGAELQ 679
Cdd:COG4717 320 ELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQE-IAALLAEAGVEDEEELRAALEQAEEYQ 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 680 ADLRDIQEEKEEIQKKLSESRHqqEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRqDLAEQL 759
Cdd:COG4717 399 ELKEELEELEEQLEELLGELEE--LLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDG-ELAELL 475
|
410
....*....|..
gi 2462579268 760 QGLSSAKELLES 771
Cdd:COG4717 476 QELEELKAELRE 487
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
797-926 |
2.13e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.51 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 797 VTQAKEVIQGEVrcLKLE-----LDTERSQAEQERDAAARQLAQAEQEgKTALEQQKaahekevNQLREKWEKERSWHQQ 871
Cdd:PRK00409 504 IEEAKKLIGEDK--EKLNeliasLEELERELEQKAEEAEALLKEAEKL-KEELEEKK-------EKLQEEEDKLLEEAEK 573
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2462579268 872 ELAKALESLEREKMELEMRLKEQQTEMEAiqAQREEERTQAESALCQMQLETEKE 926
Cdd:PRK00409 574 EAQQAIKEAKKEADEIIKELRQLQKGGYA--SVKAHELIEARKRLNKANEKKEKK 626
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
812-1035 |
2.76e-03 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 42.15 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 812 KLELDTERSQAEQerdAAARQLAQAEQEGKTALEQQKAAHEKEVNQLRekweKERSWHQQELAKALESLEREKM---ELE 888
Cdd:pfam09726 399 RLEQDIKKLKAEL---QASRQTEQELRSQISSLTSLERSLKSELGQLR----QENDLLQTKLHNAVSAKQKDKQtvqQLE 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 889 MRLKEQQTEMEAIQAQREEER---TQAESALCQMQLETEKERVSLLETLLQTQKELadaSQQLERLRQDMkvqKLKEQET 965
Cdd:pfam09726 472 KRLKAEQEARASAEKQLAEEKkrkKEEEATAARAVALAAASRGECTESLKQRKREL---ESEIKKLTHDI---KLKEEQI 545
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 966 tgilqTQLQEAQRELKEAARQHRDD------LAALQEESSSLLQD-------KMDLQKQVEDLKSQLVAQDDSQRLVEQE 1032
Cdd:pfam09726 546 -----RELEIKVQELRKYKESEKDTevlmsaLSAMQDKNQHLENSlsaetriKLDLFSALGDAKRQLEIAQGQIYQKDQE 620
|
...
gi 2462579268 1033 VQE 1035
Cdd:pfam09726 621 IKD 623
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
275-726 |
2.89e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.95 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 275 DLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELMEHEASLSRNAQEEKLSLQQVIKDITQVMVE 354
Cdd:PRK02224 313 EARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEE 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 355 EGDNIAQGSGHENSLEldssifsqfdyqDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVnllqqqhdqweEEGKALR 434
Cdd:PRK02224 393 IEELRERFGDAPVDLG------------NAEDFLEELREERDELREREAELEATLRTARERV-----------EEAEALL 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 435 QRLQKLTgerdtlAGQTVDLQGEVDSLSKEREL---LQKAREELRQQLEVLEQEAWRLRRVnVELQLQGDSAQGQkeeqq 511
Cdd:PRK02224 450 EAGKCPE------CGQPVEGSPHVETIEEDRERveeLEAELEDLEEEVEEVEERLERAEDL-VEAEDRIERLEER----- 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 512 eelhlavreRERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEV 591
Cdd:PRK02224 518 ---------REDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 592 ADLRAAAVKLSALNEALAlDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAekRREALWEKNTHLEAQLQKA 671
Cdd:PRK02224 589 ESLERIRTLLAAIADAED-EIERLREKREALAELNDERRERLAEKRERKRELEAEFDEA--RIEEAREDKERAEEYLEQV 665
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462579268 672 EEAGAELQADLRDIQEE----KEEIQ--KKLSESRHQQEAATTQLEQLHQEAKRQEEVLAR 726
Cdd:PRK02224 666 EEKLDELREERDDLQAEigavENELEelEELRERREALENRVEALEALYDEAEELESMYGD 726
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
544-972 |
3.04e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.02 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 544 TLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRaaavKLSALNEALALDKVGLNQQLLQLE 623
Cdd:pfam05483 360 SLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELK----KILAEDEKLLDEKKQFEKIAEELK 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 624 EENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQ 703
Cdd:pfam05483 436 GKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLEL 515
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 704 EaatTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVI 783
Cdd:pfam05483 516 K---KHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKIL 592
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 784 EVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAeQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWE 863
Cdd:pfam05483 593 ENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQL-NAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEE 671
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 864 KERSWHQQELAKALESLEREKmELEMRLKEQQTEMEAIQAQRE-------EERTQAESALCQMQLETEKERVSLLETLLQ 936
Cdd:pfam05483 672 KLLEEVEKAKAIADEAVKLQK-EIDKRCQHKIAEMVALMEKHKhqydkiiEERDSELGLYKNKEQEQSSAKAALEIELSN 750
|
410 420 430
....*....|....*....|....*....|....*.
gi 2462579268 937 TQKELADASQQLERLRQDMKVQKLKEQETTGILQTQ 972
Cdd:pfam05483 751 IKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
539-1054 |
3.24e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.81 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 539 LSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEA---LALDKVGL 615
Cdd:PRK01156 182 ISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMknrYESEIKTA 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 616 NQQLLQLEEENQSVCSRME--------AAEQARNALqVDLAEAEKRREALWEKNTHLEAQLQKAEEA---GAELQADLRD 684
Cdd:PRK01156 262 ESDLSMELEKNNYYKELEErhmkiindPVYKNRNYI-NDYFKYKNDIENKKQILSNIDAEINKYHAIikkLSVLQKDYND 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 685 ---IQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEE--------------VLARAVQEKEALVREKAALEVRLQA 747
Cdd:PRK01156 341 yikKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEyskniermsafiseILKIQEIDPDAIKKELNEINVKLQD 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 748 VERDRQDLAEQLQGLSSAKELLE--SSLFEAQQQNSVIEVTKGQLEVQ--IQTVTQAKEVIQGEVRCLKLE---LDTERS 820
Cdd:PRK01156 421 ISSKVSSLNQRIRALRENLDELSrnMEMLNGQSVCPVCGTTLGEEKSNhiINHYNEKKSRLEEKIREIEIEvkdIDEKIV 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 821 QAEQERDAAARQLAQAEQEGKTALEQQKAAHEK---EVNQLREKWEKERSWHQQELAKALESLEREKME-LEMRLKEQQT 896
Cdd:PRK01156 501 DLKKRKEYLESEEINKSINEYNKIESARADLEDikiKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSwLNALAVISLI 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 897 EMEAIQAQREEERTQAESALCQMQlETEKERVSLLETLLQTQKELADASQQLErlrqdmkvQKLKEQETTGILQTQLQEA 976
Cdd:PRK01156 581 DIETNRSRSNEIKKQLNDLESRLQ-EIEIGFPDDKSYIDKSIREIENEANNLN--------NKYNEIQENKILIEKLRGK 651
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 977 QRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREK 1054
Cdd:PRK01156 652 IDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMK 729
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
621-1007 |
3.40e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 621 QLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESR 700
Cdd:pfam07888 56 QREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 701 HQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQN 780
Cdd:pfam07888 136 EDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTI 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 781 SvievTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQeGKTALEQQKAAHEKEVNQLRE 860
Cdd:pfam07888 216 T----TLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDR-TQAELHQARLQAAQLTLQLAD 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 861 ---KWEKERSWHQQELAKALESLEREKMelemRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETllqt 937
Cdd:pfam07888 291 aslALREGRARWAQERETLQQSAEADKD----RIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLSES---- 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 938 qkeladaSQQLERLRQDMKV-QKLKEQ---ETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMD 1007
Cdd:pfam07888 363 -------RRELQELKASLRVaQKEKEQlqaEKQELLEYIRQLEQRLETVADAKWSEAALTSTERPDSPLSDSED 429
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
936-1097 |
3.83e-03 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 40.90 E-value: 3.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 936 QTQKELADASQQLERLR---QDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDkmdlqkqV 1012
Cdd:pfam09787 58 LLREEIQKLRGQIQQLRtelQELEAQQQEEAESSREQLQELEEQLATERSARREAEAELERLQEELRYLEEE-------L 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1013 EDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEA 1092
Cdd:pfam09787 131 RRSKATLQSRIKDREAEIEKLRNQLTSKSQSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVLQLERMEQQIKEL 210
|
....*
gi 2462579268 1093 QGEQK 1097
Cdd:pfam09787 211 QGEGS 215
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
819-959 |
3.87e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 819 RSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREkmelEMRLKEQQTEM 898
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQK----EENLDRKLELL 105
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 899 EaiqaQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADAS---------QQLERLRQDMKVQK 959
Cdd:PRK12704 106 E----KREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISgltaeeakeILLEKVEEEARHEA 171
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
665-915 |
3.97e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 3.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 665 EAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAvQEKEALVREKAALEVR 744
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEA-EAEIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 745 LQAVERDRQDLAEQLQGLSSAKELLESSLFeaqqqnsvievtkgqlevqIQTVTQAKEVIQGEVRCLKLELDTERSQAEQ 824
Cdd:COG3883 94 ALYRSGGSVSYLDVLLGSESFSDFLDRLSA-------------------LSKIADADADLLEELKADKAELEAKKAELEA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 825 ERDAAARQLAQAEQEgKTALEQQKAAHEKEVNQLREKwekerswhQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQ 904
Cdd:COG3883 155 KLAELEALKAELEAA-KAELEAQQAEQEALLAQLSAE--------EAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAA 225
|
250
....*....|.
gi 2462579268 905 REEERTQAESA 915
Cdd:COG3883 226 AAAAAAAAAAA 236
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
520-736 |
5.03e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 5.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 520 ERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAV 599
Cdd:PLN02939 164 EKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 600 KLSAlnealALDKVG-LNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRR-EALWEKNTHLEAQLQKA----EE 673
Cdd:PLN02939 244 FLKA-----ELIEVAeTEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQyDCWWEKVENLQDLLDRAtnqvEK 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579268 674 AGAELQADlRDIQEEKEEIQKKLSESRHQQEaATTQLEQLHQEAKRQEEVLARAVQEKEALVR 736
Cdd:PLN02939 319 AALVLDQN-QDLRDKVDKLEASLKEANVSKF-SSYKVELLQQKLKLLEERLQASDHEIHSYIQ 379
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
740-1104 |
5.84e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.65 E-value: 5.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 740 ALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLkLELDTER 819
Cdd:pfam07888 49 AQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDAL-LAQRAAH 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 820 SQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKwEKERSWHQQELAKALESLEREKMELEmRLKEQQTEME 899
Cdd:pfam07888 128 EARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEE-EAERKQLQAKLQQTEEELRSLSKEFQ-ELRNSLAQRD 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 900 AIQAQREEERTQAESALCQMQlETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETtgilQTQLQEAQRE 979
Cdd:pfam07888 206 TQVLQLQDTITTLTQKLTTAH-RKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRT----QAELHQARLQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 980 LKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEklrETQEYNRIQKELEREKASLTL 1059
Cdd:pfam07888 281 AAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQE---ERMEREKLEVELGREKDCNRV 357
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2462579268 1060 SLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQME 1104
Cdd:pfam07888 358 QLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLE 402
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
395-754 |
6.16e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 6.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 395 LTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEE-GKALRQRLQKLTGERDtlagqtvDLQGEVDSLSKERELLQKARE 473
Cdd:COG4717 151 LEERLEELRELEEELEELEAELAELQEELEELLEQlSLATEEELQDLAEELE-------ELQQRLAELEEELEEAQEELE 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 474 ELRQQLEVLEQEAWRLRRVN---------------VELQLQGDSAQGQKEEQQEELHLAV-----------RERERLQEM 527
Cdd:COG4717 224 ELEEELEQLENELEAAALEErlkearlllliaaalLALLGLGGSLLSLILTIAGVLFLVLgllallflllaREKASLGKE 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 528 LMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVklsaLNEA 607
Cdd:COG4717 304 AEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAL----LAEA 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 608 LALDKVGLNQQLLQLEEENQsvcsrmeaAEQARNALQVDLAEAEKRREALWEKNT--HLEAQLQKAEEAGAELQADLRDI 685
Cdd:COG4717 380 GVEDEEELRAALEQAEEYQE--------LKEELEELEEQLEELLGELEELLEALDeeELEEELEELEEELEELEEELEEL 451
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579268 686 QEEKEEIQKKLSESRHQQEaattqLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQD 754
Cdd:COG4717 452 REELAELEAELEQLEEDGE-----LAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERLP 515
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
968-1153 |
6.25e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.65 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 968 ILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQ 1047
Cdd:pfam07888 31 LLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1048 KELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQmellRQEVKEKEADFLAQEAQLLEE 1127
Cdd:pfam07888 111 EELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQ----RKEEEAERKQLQAKLQQTEEE 186
|
170 180
....*....|....*....|....*.
gi 2462579268 1128 LEASHITEQQLRASLWAQEAKAAQLQ 1153
Cdd:pfam07888 187 LRSLSKEFQELRNSLAQRDTQVLQLQ 212
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
517-733 |
6.55e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 6.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 517 AVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVAD-LR 595
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGErAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 596 AAAVKLSALNEALALDKVGLNQQLLqleeenqsvcSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAG 675
Cdd:COG3883 94 ALYRSGGSVSYLDVLLGSESFSDFL----------DRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALK 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579268 676 AELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEA 733
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| GBP_C |
pfam02841 |
Guanylate-binding protein, C-terminal domain; Transcription of the anti-viral ... |
821-904 |
6.77e-03 |
|
Guanylate-binding protein, C-terminal domain; Transcription of the anti-viral guanylate-binding protein (GBP) is induced by interferon-gamma during macrophage induction. This family contains GBP1 and GPB2, both GTPases capable of binding GTP, GDP and GMP.
Pssm-ID: 460721 [Multi-domain] Cd Length: 297 Bit Score: 39.96 E-value: 6.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 821 QAEQERDAAARQLAQAEQEGKTALEQ----QKAAHEKEVNQLREKWEKERSWHQQELAKALEslEREKMELEMRLKEQQT 896
Cdd:pfam02841 207 EAERAKAEAAEAEQELLREKQKEEEQmmeaQERSYQEHVKQLIEKMEAEREQLLAEQERMLE--HKLQEQEELLKEGFKT 284
|
....*...
gi 2462579268 897 EMEAIQAQ 904
Cdd:pfam02841 285 EAESLQKE 292
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
636-850 |
7.08e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.20 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 636 AEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQ 715
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 716 EAKRQ----------------EEVLARAVQEKEALVREKAALE---VRLQAVERDRQDLAEQLQGLSSAKELLESSLFEA 776
Cdd:COG3883 94 ALYRSggsvsyldvllgsesfSDFLDRLSALSKIADADADLLEelkADKAELEAKKAELEAKLAELEALKAELEAAKAEL 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462579268 777 QQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAA 850
Cdd:COG3883 174 EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAA 247
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
899-1169 |
7.24e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.66 E-value: 7.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 899 EAIQAQREE--ERTQAESALCQMQLE--------TEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQET--- 965
Cdd:PLN02939 106 EAIAAIDNEqqTNSKDGEQLSDFQLEdlvgmiqnAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETdar 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 966 ----------TGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVaqddsqrlveqevqe 1035
Cdd:PLN02939 186 iklaaqekihVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELI--------------- 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1036 KLRETQEynRIQKeLEREKASLTLSLMEKEQRLLVLQEADSirqqELSALRQDMqeaqgeqkeLSAQMELLrQEVKEKEA 1115
Cdd:PLN02939 251 EVAETEE--RVFK-LEKERSLLDASLRELESKFIVAQEDVS----KLSPLQYDC---------WWEKVENL-QDLLDRAT 313
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579268 1116 DFLAQEAQLLEELEASHITEQQLRASLwaQEAKAAQ--------LQLRLRSTESQLEALAAE 1169
Cdd:PLN02939 314 NQVEKAALVLDQNQDLRDKVDKLEASL--KEANVSKfssykvelLQQKLKLLEERLQASDHE 373
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
249-359 |
7.24e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 40.58 E-value: 7.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 249 LLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQS-QKQNEDYEKMIKALRETVE--ILETNHTELME 325
Cdd:PRK00409 521 LIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLlEEAEKEAQQAIKEAKKEADeiIKELRQLQKGG 600
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2462579268 326 HEASLSRNAQE---------EKLSLQQVIKDITQVMVEEGDNI 359
Cdd:PRK00409 601 YASVKAHELIEarkrlnkanEKKEKKKKKQKEKQEELKVGDEV 643
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
671-1040 |
7.35e-03 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 40.62 E-value: 7.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 671 AEEAGAELQADLRDIQEEKEEIQKKLSESRhqqEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEvrlqavER 750
Cdd:pfam02029 4 EEEAARERRRRAREERRRQKEEEEPSGQVT---ESVEPNEHNSYEEDSELKPSGQGGLDEEEAFLDRTAKRE------ER 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 751 DRQDLAEQLQGlssAKELLESslfeAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAA 830
Cdd:pfam02029 75 RQKRLQEALER---QKEFDPT----IADEKESVAERKENNEEEENSSWEKEEKRDSRLGRYKEEETEIREKEYQENKWST 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 831 RQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELA-KALESLEREKMELEMrlKEQQTEMEAIQAQREEER 909
Cdd:pfam02029 148 EVRQAEEEGEEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKyESKVFLDQKRGHPEV--KSQNGEEEVTKLKVTTKR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 910 TQAESALCQmqlETEKERVSLLETllqtqkeladaSQQLERLRQdmKVQKLKEQETTGILQTQlQEAQRELKEAARQHRD 989
Cdd:pfam02029 226 RQGGLSQSQ---EREEEAEVFLEA-----------EQKLEELRR--RRQEKESEEFEKLRQKQ-QEAELELEELKKKREE 288
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2462579268 990 DLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRET 1040
Cdd:pfam02029 289 RRKLLEEEEQRRKQEEAERKLREEEEKRRMKEEIERRRAEAAEKRQKLPED 339
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
969-1168 |
9.12e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 9.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 969 LQTQLQEAQRELKEAARQHrdDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDdsqrlveqevqeklretQEYNRIQK 1048
Cdd:COG3206 187 LRKELEEAEAALEEFRQKN--GLVDLSEEAKLLLQQLSELESQLAEARAELAEAE-----------------ARLAALRA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 1049 ELEREKASLTLSLMEKEQRLLVLQEADsiRQQELSALRQ-------DMQEAQGEQKELSAQMELLRQEVKEKEADFLAQE 1121
Cdd:COG3206 248 QLGSGPDALPELLQSPVIQQLRAQLAE--LEAELAELSArytpnhpDVIALRAQIAALRAQLQQEAQRILASLEAELEAL 325
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2462579268 1122 AQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAA 1168
Cdd:COG3206 326 QAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQ 372
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
427-953 |
9.84e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.16 E-value: 9.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 427 EEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKA----------REELRQQLEVLEQEAWRL-----RR 491
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQlqaetelcaeAEEMRARLAARKQELEEIlheleSR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 492 VNVE----LQLQGDSAQGQKEEQQEELHLAVRE--RERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTE 565
Cdd:pfam01576 84 LEEEeersQQLQNEKKKMQQHIQDLEEQLDEEEaaRQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 566 VTAALARAEQSIAELSSSENTLKTEVADL------------------RAAAVKLSALNEALA---LDKVGLNQQLLQLEE 624
Cdd:pfam01576 164 FTSNLAEEEEKAKSLSKLKNKHEAMISDLeerlkkeekgrqelekakRKLEGESTDLQEQIAelqAQIAELRAQLAKKEE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 625 ENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEE------IQKKLSE 698
Cdd:pfam01576 244 ELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDtldttaAQQELRS 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 699 SRHQQ---------EAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAK--- 766
Cdd:pfam01576 324 KREQEvtelkkaleEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKqds 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 767 -----------ELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQerdaaARQLAQ 835
Cdd:pfam01576 404 ehkrkklegqlQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQD-----TQELLQ 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579268 836 AEQEGKTALEQQKAAHEKEVNQLREKWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESA 915
Cdd:pfam01576 479 EETRQKLNLSTRLRQLEDERNSLQEQLEEEEE-AKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEAL 557
|
570 580 590
....*....|....*....|....*....|....*...
gi 2462579268 916 LCQMQlETEKERVSLLETLLQTQKELADASQQLERLRQ 953
Cdd:pfam01576 558 TQQLE-EKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQ 594
|
|
| |
