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Conserved domains on  [gi|2462590183|ref|XP_054202684|]
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protein SSUH2 homolog isoform X5 [Homo sapiens]

Protein Classification

DnaJ_zf domain-containing protein( domain architecture ID 10180502)

DnaJ_zf domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
 292-359 7.37e-07

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


:

Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 46.48  E-value: 7.37e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462590183 292 CHKCHGRG------RYKCSGCHGAGTVRcpsccgakrkakQSRRCQLCAGSGRRRCSTCSGRG---NKTCATCKGEK 359
Cdd:cd10719     1 CPTCNGSGakpgtkPKTCPTCGGSGQVR------------QVQGTGFGFFQTQTTCPTCGGTGkiiKDPCPKCKGKG 65
 
Name Accession Description Interval E-value
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
 292-359 7.37e-07

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 46.48  E-value: 7.37e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462590183 292 CHKCHGRG------RYKCSGCHGAGTVRcpsccgakrkakQSRRCQLCAGSGRRRCSTCSGRG---NKTCATCKGEK 359
Cdd:cd10719     1 CPTCNGSGakpgtkPKTCPTCGGSGQVR------------QVQGTGFGFFQTQTTCPTCGGTGkiiKDPCPKCKGKG 65
DnaJ_CXXCXGXG pfam00684
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ...
 292-359 6.88e-06

DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.


Pssm-ID: 459904 [Multi-domain]  Cd Length: 65  Bit Score: 43.70  E-value: 6.88e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462590183 292 CHKCHGRG------RYKCSGCHGAGTVRcpsccgakrkakQSRRCQLCAGSGRRRCSTCSGRG---NKTCATCKGEK 359
Cdd:pfam00684   1 CPTCNGSGakpgtkPTTCPTCGGTGQVR------------RVQQTGPGFFQMQSTCPTCGGTGkiiKDPCKKCKGKG 65
PLN03165 PLN03165
chaperone protein dnaJ-related; Provisional
 292-348 2.99e-05

chaperone protein dnaJ-related; Provisional


Pssm-ID: 178709 [Multi-domain]  Cd Length: 111  Bit Score: 43.27  E-value: 2.99e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2462590183 292 CHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKqsrrCQLCAGSGRRRCSTCSGRG 348
Cdd:PLN03165   44 CFPCSGTGAQVCRFCVGSGNVTVELGGGEKEVSK----CINCDGAGSLTCTTCQGSG 96
 
Name Accession Description Interval E-value
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
 292-359 7.37e-07

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 46.48  E-value: 7.37e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462590183 292 CHKCHGRG------RYKCSGCHGAGTVRcpsccgakrkakQSRRCQLCAGSGRRRCSTCSGRG---NKTCATCKGEK 359
Cdd:cd10719     1 CPTCNGSGakpgtkPKTCPTCGGSGQVR------------QVQGTGFGFFQTQTTCPTCGGTGkiiKDPCPKCKGKG 65
DnaJ_CXXCXGXG pfam00684
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ...
 292-359 6.88e-06

DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.


Pssm-ID: 459904 [Multi-domain]  Cd Length: 65  Bit Score: 43.70  E-value: 6.88e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462590183 292 CHKCHGRG------RYKCSGCHGAGTVRcpsccgakrkakQSRRCQLCAGSGRRRCSTCSGRG---NKTCATCKGEK 359
Cdd:pfam00684   1 CPTCNGSGakpgtkPTTCPTCGGTGQVR------------RVQQTGPGFFQMQSTCPTCGGTGkiiKDPCKKCKGKG 65
PLN03165 PLN03165
chaperone protein dnaJ-related; Provisional
 292-348 2.99e-05

chaperone protein dnaJ-related; Provisional


Pssm-ID: 178709 [Multi-domain]  Cd Length: 111  Bit Score: 43.27  E-value: 2.99e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2462590183 292 CHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKqsrrCQLCAGSGRRRCSTCSGRG 348
Cdd:PLN03165   44 CFPCSGTGAQVCRFCVGSGNVTVELGGGEKEVSK----CINCDGAGSLTCTTCQGSG 96
PRK14280 PRK14280
molecular chaperone DnaJ;
291-351 4.93e-05

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 45.48  E-value: 4.93e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462590183 291 ECHKCHGRG------RYKCSGCHGAGTVRCPSCCGAKRKAKQsRRCQLCAGSGR---RRCSTCSGRGNKT 351
Cdd:PRK14280  145 TCDTCHGSGakpgtsKETCSHCGGSGQVSVEQNTPFGRVVNR-QTCPHCNGTGQeikEKCPTCHGKGKVR 213
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 291-348 1.38e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 43.92  E-value: 1.38e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462590183 291 ECHKCHGRGRYK------CSGCHGAG--TVRCPSCCGAKRkakQSRRCQLCAGSG---RRRCSTCSGRG 348
Cdd:PRK14276  148 TCHTCNGSGAKPgtspvtCGKCHGSGviTVDTQTPLGMMR---RQVTCDVCHGTGkeiKEPCQTCHGTG 213
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 247-358 2.11e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 43.66  E-value: 2.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462590183 247 FTNHSVDGPQRGAsprlwDIKVQGPPMFQED----TRKFQVPHSslvKECHKCHGrGRYKcsgcHGAGTVRCPSCCGAKr 322
Cdd:PRK14283  108 FGGGSRHGPQRGA-----DIYTEVEITLEEAasgvEKDIKVRHT---KKCPVCNG-SRAE----PGSEVKTCPTCGGTG- 173

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2462590183 323 KAKQSRRCQLCAGSGRRRCSTCSGRGN---KTCATCKGE 358
Cdd:PRK14283  174 QVKQVRNTILGQMMNVTTCPDCQGEGKiveKPCSNCHGK 212
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 254-360 2.48e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 43.30  E-value: 2.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462590183 254 GPQRGASPRlWDIKVQgppmFQE----DTRKFQVPHSslvKECHKCHGRGRYKcsgchGAGTVRCPSCcGAKRKAKQSRR 329
Cdd:PRK14298  110 GPRRGSDLR-YDLYIT----LEEaafgVRKDIDVPRA---ERCSTCSGTGAKP-----GTSPKRCPTC-GGTGQVTTTRS 175

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2462590183 330 CQLCAGSGRRRCSTCSGRGN---KTCATCKGEKK 360
Cdd:PRK14298  176 TPLGQFVTTTTCSTCHGRGQvieSPCPVCSGTGK 209
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
 278-343 2.51e-04

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 42.24  E-value: 2.51e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462590183 278 TRKFQVPHsslVKECHKCHGRG------RYKCSGCHGAGTVR----------CPSCCGAKRKAKqSRRCQLCAGSGRRRC 341
Cdd:pfam01556  17 TKKIKITR---NVICDTCGGSGakpgtsPKTCPCCGGGGQVRrqfgffstctCCPCCGGGGKII-DKCCKCCGGGGVVEK 92


                  ..
gi 2462590183 342 ST 343
Cdd:pfam01556  93 KT 94
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 288-348 3.29e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 43.01  E-value: 3.29e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462590183 288 LVKECHKCHGRGRYK------CSGCHGAGTVRCPSCCGAkRKAKQSRRCQLCAGSG---RRRCSTCSGRG 348
Cdd:PRK14296  148 LLTNCSKCFGSGAESnsdihiCNNCHGTGEVLVQKNMGF-FQFQQSAKCNVCNGAGkiiKNKCKNCKGKG 216
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 290-340 5.31e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 42.09  E-value: 5.31e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462590183 290 KECHKCHGRG------RYKCSGCHGAGTVR---------------CPSCCGAKRKAKQSrrCQLCAGSGRRR 340
Cdd:PRK14282  153 ETCPHCGGTGvepgsgYVTCPKCHGTGRIReerrsffgvfvsertCERCGGTGKIPGEY--CHECGGSGRIR 222
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 273-348 5.38e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 42.30  E-value: 5.38e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462590183 273 MFQEDTrKFQVPHSslvKECHKCHGRGRY------KCSGCHGAGTVRCPSCCGAKRKAKQsRRCQLCAGSGR---RRCST 343
Cdd:PRK14287  126 VFGKET-EIEIPRE---ETCGTCHGSGAKpgtkpeTCSHCGGSGQLNVEQNTPFGRVVNR-RVCHHCEGTGKiikQKCAT 200


                  ....*
gi 2462590183 344 CSGRG 348
Cdd:PRK14287  201 CGGKG 205
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 280-340 8.18e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 41.72  E-value: 8.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462590183 280 KFQVPhsslvkeCHKCHGRGRYK-----CSGCHGAGTVR---------------CPSCCGAKRKAKQsrRCQLCAGSGRR 339
Cdd:PRK14281  161 KKQVP-------CKECNGTGSKTgatetCPTCHGSGEVRqasktmfgqfvnitaCPTCGGEGRVVKD--RCPACYGEGIK 231


                  .
gi 2462590183 340 R 340
Cdd:PRK14281  232 Q 232
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 292-313 9.28e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 41.28  E-value: 9.28e-04
                          10        20
                  ....*....|....*....|....*
gi 2462590183 292 CHKCHGRGRY---KCSGCHGAGTVR 313
Cdd:PRK10767  184 CPTCHGRGKIikdPCKKCHGQGRVE 208
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 289-312 6.76e-03

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 38.76  E-value: 6.76e-03
                          10        20
                  ....*....|....*....|....*..
gi 2462590183 289 VKECHKCHGRGRY---KCSGCHGAGTV 312
Cdd:PRK14290  191 VTTCRTCGGRGRIpeeKCPRCNGTGTV 217
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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