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Conserved domains on  [gi|2462596100|ref|XP_054205471|]
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cystine/glutamate transporter isoform X7 [Homo sapiens]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
1-406 0e+00

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 590.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   1 MSLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGRYILEPFFIQ 80
Cdd:TIGR00911  78 LALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPD 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  81 CEIPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTQ--NFKDAFSGRDSSITRL 158
Cdd:TIGR00911 158 CEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVEslNPKNAFEGTETSAGGI 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 159 PLAFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGNF 238
Cdd:TIGR00911 238 VLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVM 317
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 239 SLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSFA 318
Cdd:TIGR00911 318 SWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFA 397
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 319 RWLFIGLAVAGLIYLRYKCPDMHRPFKVPLFIPALFSFTCLFMVALSLYSDPFSTGIGFVITLTGVPAYYLFIIWDKKPR 398
Cdd:TIGR00911 398 NWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPK 477
                         410
                  ....*....|
gi 2462596100 399 WFR--IMSVT 406
Cdd:TIGR00911 478 WFRylIVSKT 487
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
1-406 0e+00

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 590.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   1 MSLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGRYILEPFFIQ 80
Cdd:TIGR00911  78 LALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPD 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  81 CEIPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTQ--NFKDAFSGRDSSITRL 158
Cdd:TIGR00911 158 CEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVEslNPKNAFEGTETSAGGI 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 159 PLAFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGNF 238
Cdd:TIGR00911 238 VLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVM 317
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 239 SLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSFA 318
Cdd:TIGR00911 318 SWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFA 397
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 319 RWLFIGLAVAGLIYLRYKCPDMHRPFKVPLFIPALFSFTCLFMVALSLYSDPFSTGIGFVITLTGVPAYYLFIIWDKKPR 398
Cdd:TIGR00911 398 NWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPK 477
                         410
                  ....*....|
gi 2462596100 399 WFR--IMSVT 406
Cdd:TIGR00911 478 WFRylIVSKT 487
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-390 1.50e-58

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 197.81  E-value: 1.50e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   1 MSLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVeLLIIRPAATAVISLAFGRYiLEPFFiq 80
Cdd:COG0531    45 AAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGFLAGWA-LLLSYVLAVAAVAVAFGGY-LSSLF-- 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  81 ceiPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGvmqLIKGQTQNFkDAFSGRDSSITRLPL 160
Cdd:COG0531   121 ---PAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVVG---LFAFDPANF-TPFLPAGGGLSGVLA 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 161 AFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGN-FS 239
Cdd:COG0531   194 ALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGA 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 240 LAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSG--DLDSLLNFLSF 317
Cdd:COG0531   274 ILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGaaSFTALASLASV 353
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462596100 318 ARWLFIGLAVAGLIYLRYKCPDMHRPFKVPLFIPALFSFtcLFMVALSLYSDPFSTGIGFVITLTGVPAYYLF 390
Cdd:COG0531   354 GVLLAYLLVALAVIVLRRRRPDLPRPFRVPLPLIPILGI--LLCLFLLYLLGPGALLIGLVLLAIGLLLYLLY 424
AA_permease_2 pfam13520
Amino acid permease;
3-384 2.17e-36

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 138.21  E-value: 2.17e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   3 LTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGrYILEPFFIQCE 82
Cdd:pfam13520  34 VWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYVLGLASSASVAAS-YLLSALGPDLV 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  83 IPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKL--TAILIIIVPGVMQLIKGQTQNFKDAFSGRDSSITRLPL 160
Cdd:pfam13520 113 PTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLllPLILIIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFA 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 161 AFYYGMYAYAGWFYLNFVTEEVenPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFS--ERLLGN- 237
Cdd:pfam13520 193 GFLGVLWSFTGFESAANVSEEV--KKRNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVAAllFQAVGGk 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 238 -FSLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKH-TPLPAVIVLHPLTMIMLF-----SGDLDS 310
Cdd:pfam13520 271 wGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFAKVNKFgSPIRAIILTAILSLILLLlfllsPAAYNA 350
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462596100 311 LLNFLSFARWLFIGLAVAGLIYLRYKCPDMHRPFKVPLFIPALFSFTCLFMVALSLYSDPFSTGIGFVITLTGV 384
Cdd:pfam13520 351 LLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVAIFGILFSLFLIVALFFPPVGPATGSSLNYAIILI 424
frlA PRK11357
amino acid permease;
10-398 9.87e-19

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 87.99  E-value: 9.87e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  10 GVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGRYIlePFFIqcEIPELAIK 89
Cdd:PRK11357   53 GLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNL--GFLT--PIDPLLGK 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  90 LITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTQNFKDAFSGRDSSITRLPLAFYYGMYAY 169
Cdd:PRK11357  129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSY 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 170 AGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSN---AVAVTFSERLLGNFSLAVPIFV 246
Cdd:PRK11357  209 TGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFVAITA 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 247 ALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSFARWLFIGLA 326
Cdd:PRK11357  289 MIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLT 368
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462596100 327 VAGLIYLRYKcPDMHRPFKVPLF--IPALFSFTCLFMVALSLYSDPFSTGI-GFVITLTGVPAYYLfiiWDKKPR 398
Cdd:PRK11357  369 FGSIIWCRKR-DDYKPLWRTPAFglMTTLAIASSLILVASTFVWAPIPGLIcAVIVIATGLPAYAF---WAKRSR 439
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
1-406 0e+00

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 590.18  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   1 MSLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGRYILEPFFIQ 80
Cdd:TIGR00911  78 LALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPD 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  81 CEIPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTQ--NFKDAFSGRDSSITRL 158
Cdd:TIGR00911 158 CEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVEslNPKNAFEGTETSAGGI 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 159 PLAFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGNF 238
Cdd:TIGR00911 238 VLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVM 317
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 239 SLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSFA 318
Cdd:TIGR00911 318 SWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFA 397
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 319 RWLFIGLAVAGLIYLRYKCPDMHRPFKVPLFIPALFSFTCLFMVALSLYSDPFSTGIGFVITLTGVPAYYLFIIWDKKPR 398
Cdd:TIGR00911 398 NWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPK 477
                         410
                  ....*....|
gi 2462596100 399 WFR--IMSVT 406
Cdd:TIGR00911 478 WFRylIVSKT 487
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-390 1.50e-58

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 197.81  E-value: 1.50e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   1 MSLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVeLLIIRPAATAVISLAFGRYiLEPFFiq 80
Cdd:COG0531    45 AAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGFLAGWA-LLLSYVLAVAAVAVAFGGY-LSSLF-- 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  81 ceiPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGvmqLIKGQTQNFkDAFSGRDSSITRLPL 160
Cdd:COG0531   121 ---PAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVVG---LFAFDPANF-TPFLPAGGGLSGVLA 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 161 AFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGN-FS 239
Cdd:COG0531   194 ALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGA 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 240 LAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSG--DLDSLLNFLSF 317
Cdd:COG0531   274 ILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGaaSFTALASLASV 353
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462596100 318 ARWLFIGLAVAGLIYLRYKCPDMHRPFKVPLFIPALFSFtcLFMVALSLYSDPFSTGIGFVITLTGVPAYYLF 390
Cdd:COG0531   354 GVLLAYLLVALAVIVLRRRRPDLPRPFRVPLPLIPILGI--LLCLFLLYLLGPGALLIGLVLLAIGLLLYLLY 424
AA_permease_2 pfam13520
Amino acid permease;
3-384 2.17e-36

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 138.21  E-value: 2.17e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   3 LTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGrYILEPFFIQCE 82
Cdd:pfam13520  34 VWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYVLGLASSASVAAS-YLLSALGPDLV 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  83 IPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKL--TAILIIIVPGVMQLIKGQTQNFKDAFSGRDSSITRLPL 160
Cdd:pfam13520 113 PTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLllPLILIIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFA 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 161 AFYYGMYAYAGWFYLNFVTEEVenPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFS--ERLLGN- 237
Cdd:pfam13520 193 GFLGVLWSFTGFESAANVSEEV--KKRNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVAAllFQAVGGk 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 238 -FSLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKH-TPLPAVIVLHPLTMIMLF-----SGDLDS 310
Cdd:pfam13520 271 wGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFAKVNKFgSPIRAIILTAILSLILLLlfllsPAAYNA 350
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462596100 311 LLNFLSFARWLFIGLAVAGLIYLRYKCPDMHRPFKVPLFIPALFSFTCLFMVALSLYSDPFSTGIGFVITLTGV 384
Cdd:pfam13520 351 LLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVAIFGILFSLFLIVALFFPPVGPATGSSLNYAIILI 424
2A0305 TIGR00908
ethanolamine permease; The three genes used as the seed for this model (from Burkholderia ...
19-390 1.76e-26

ethanolamine permease; The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129986 [Multi-domain]  Cd Length: 442  Bit Score: 110.70  E-value: 1.76e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  19 SYAELGTTIKKSGGHYTYILEVFGPLPAF---VRVWVELLIirpaATAVISLAFGRYIlepffiQCEIPELAIKLITAVG 95
Cdd:TIGR00908  59 SLAELSTMIPTAGGGYGFARRAFGPWGGFlagTAILIEFAF----APPAIACFIGAYC------ESLFPVGPGWLAALVF 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  96 ITVVMVLNSMSVSWSARIQIFLTFckLTAILIIIVPGVMQLIKGQTQNFKDAFSGRDSSitrLPLAfYYGMYA---YAGW 172
Cdd:TIGR00908 129 YIVFIGINILGVGEAAKLEFVVTA--VAIIALGVFIGAMVPHFDSANLFNGPQTGASSF---LPGA-YVGVFAaipFAIW 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 173 FYLN-----FVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGNFSLAVPIFVA 247
Cdd:TIGR00908 203 FFLAvegvaMAAEETKNPKRDIPRGLIGAILTLLALAAGILVVGPGAADAKELMGSNNPLPEALESIYGGSTWMSQFVNL 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 248 LSCFG---SMNGGVFAVSRLFYVASREGHLPEILSMIHvRKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSFARWLFIG 324
Cdd:TIGR00908 283 VGLFGliaSFHGIIYGYSRQIFALSRAGYLPESLSKVN-RKKAPVLAIVVPGVIGFGLSLTGQTALIILVSVFGAIISYV 361
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462596100 325 LAVAGLIYLRYKCPDMHRPFKVPLFI--PALFSFTCLFMVALSLYSDPFSTGIGFVITLTGVPAYYLF 390
Cdd:TIGR00908 362 LSMAAHFTLRIRRPDMERPYRTPGGIltPGVALVLACVALVTGFYVDPRVVVGAVAIFVVLIGYYFLY 429
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
8-336 1.71e-22

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 99.89  E-value: 1.71e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   8 VCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELL--IIRPAATA---------VISLAFGRYILEP 76
Cdd:TIGR00906  70 ISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELWAFITGWNLILeyVIGTAAVArswsayfdeLLNKQIGQFRRTY 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  77 FFIQCEIPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGvmqLIKGQTQNFKDAFSGRDSSIT 156
Cdd:TIGR00906 150 FKLNYDGLAEYPDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAG---FTKADVANWSITEEKGAGGFM 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 157 rlPLAFYYGM-------YAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVT 229
Cdd:TIGR00906 227 --PYGFTGVLsgaatcfFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVA 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 230 FSERLLGNFSLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSGDLD 309
Cdd:TIGR00906 305 FEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLK 384
                         330       340
                  ....*....|....*....|....*..
gi 2462596100 310 SLLNFLSFARWLFIGLAVAGLIYLRYK 336
Cdd:TIGR00906 385 ALVDLLSIGTLLAYSLVAACVLILRYQ 411
frlA PRK11357
amino acid permease;
10-398 9.87e-19

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 87.99  E-value: 9.87e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  10 GVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGRYIlePFFIqcEIPELAIK 89
Cdd:PRK11357   53 GLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNL--GFLT--PIDPLLGK 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  90 LITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTQNFKDAFSGRDSSITRLPLAFYYGMYAY 169
Cdd:PRK11357  129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSY 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 170 AGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSN---AVAVTFSERLLGNFSLAVPIFV 246
Cdd:PRK11357  209 TGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFVAITA 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 247 ALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSFARWLFIGLA 326
Cdd:PRK11357  289 MIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLT 368
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462596100 327 VAGLIYLRYKcPDMHRPFKVPLF--IPALFSFTCLFMVALSLYSDPFSTGI-GFVITLTGVPAYYLfiiWDKKPR 398
Cdd:PRK11357  369 FGSIIWCRKR-DDYKPLWRTPAFglMTTLAIASSLILVASTFVWAPIPGLIcAVIVIATGLPAYAF---WAKRSR 439
AA_permease pfam00324
Amino acid permease;
3-397 2.52e-17

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 83.52  E-value: 2.52e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   3 LTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLiirpaaTAVISLAFGRYILEPFFIQCE 82
Cdd:pfam00324  32 LLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWL------SWITVLALELTAASILIQFWE 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  83 -IPELAIKLITAVGITVVMVLNSM-SVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTQNFKDAFSGRDSSITRLPL 160
Cdd:pfam00324 106 lVPDIPYLWVWGAVFLVLLTIINLvGVKWYGEAEFWFALIKIIAIIGFIIVGIILLSGGNPNDGAIFRYLGDNGGKNNFP 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 161 AFYYG---------MYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFS 231
Cdd:pfam00324 186 PGFGKgfisvfviaFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYILSLLAIGLLVPWNDPGLLNDSASAAS 265
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 232 ERLLGNFSLAVPIFVAL-------SCFGSMNGGVFAVSRLFYVASREGHLPEILsMIHVRKHTPLPAVIVlhplTMIMLF 304
Cdd:pfam00324 266 PFVIFFKFLGISGLAPLinaviltAALSAANSSLYSGSRMLYSLARDGLAPKFL-KKVDKRGVPLRAILV----SMVISL 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 305 SGDLDSLLNFLSFARWL-----FIGLAVAGLIYLRYkcPDMHRPFKVPLFIPALFSFTCLFMVALSLYsdpfstGIGFVI 379
Cdd:pfam00324 341 LALLLASLNPAIVFNFLlaisgLSGLIVWGLISLSH--LRFRKAFKYQGRSIDELPFKAPLGPLGVIL------GLAAII 412
                         410
                  ....*....|....*...
gi 2462596100 380 TLTGVPAYYLFIIWDKKP 397
Cdd:pfam00324 413 IILIIQFLYAFLPVPGGP 430
PRK10644 PRK10644
arginine/agmatine antiporter;
7-305 1.34e-07

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 53.64  E-value: 1.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   7 TVCGVLSLfgALSYAELGTTIKKSGGHYTYILEVFGPLPAF---VRVWVELlIIRPAATAVISLAFGRYilepFFiqcei 83
Cdd:PRK10644   49 TIIGALGL--SMVYAKMSSLDPSPGGSYAYARRCFGPFLGYqtnVLYWLAC-WIGNIAMVVIGVGYLSY----FF----- 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  84 PELAIKLITAVGITVVM----VLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMqLIKGQTqnFKDAF--SGRdSSITR 157
Cdd:PRK10644  117 PILKDPLVLTITCVVVLwifvLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWF-WFRGET--YMAAWnvSGL-GTFGA 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 158 LPLAFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGN 237
Cdd:PRK10644  193 IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGD 272
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462596100 238 FSLA-VPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHvRKHTPLPAVIVLHPLTMIMLFS 305
Cdd:PRK10644  273 TAGAiVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAGLLIVGVLMTIFQLS 340
PRK11021 PRK11021
putative transporter; Provisional
2-295 3.18e-07

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 52.22  E-value: 3.18e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   2 SLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGryilepfFIQC 81
Cdd:PRK11021   34 SLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGWLFLSVIPVGLPAALQIAAG-------FGQA 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  82 EIPE-----LAIKLITavgITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLikgQTQNFKDAFSGRDSSI- 155
Cdd:PRK11021  107 LFGWsswqlLLAELLT---LALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAGDIKP---ADIPFPAPGSIEWSGLf 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 156 TRLPLAF--YYGMYAYAgwfylnFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSER 233
Cdd:PRK11021  181 AALGVMFwcFVGIEAFA------HLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGDKQAAAASLPGIFVQ 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462596100 234 LLGNFSLAV-PIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHVRkHTPLPAVIVL 295
Cdd:PRK11021  255 LFGGYALWViCVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSAR-GVPVNALNAV 316
potE PRK10655
putrescine transporter; Provisional
1-360 1.83e-06

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 50.03  E-value: 1.83e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   1 MSLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVW---VELLIirpAATAVISLAFGrYILEpf 77
Cdd:PRK10655   39 ISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYtygVSLLI---ANVAIAISAVG-YGTE-- 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  78 FIQCEIPELAIKLITAVGITVVMVLNSMSVSWSARIQIFltfckltAILIIIVPGVMQLIKG----QTQNFKDA------ 147
Cdd:PRK10655  113 LFGATLSPVQICLATIGVLWLCTVANFGGARITGQISSV-------TVWGVIIPVVGLSIIGwfwfSPSLYVAAwnphhl 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 148 --FSGRDSSITRLPLAFYyGMYAYAGwfylnfVTEEVENPEKTIPLAICISMAIVTIGYVL-TNVAYFTTINAEeLLLSN 224
Cdd:PRK10655  186 pfFSAVGSSIAMTLWAFL-GLESACA------NSDAVENPERNVPIAVLGGTLGAAVIYIVsTNVIAGIVPNME-LANST 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 225 A-VAVTFSERL---LGNFSLAVPIfvaLSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIhVRKHTPLPAVI---VLHP 297
Cdd:PRK10655  258 ApFGLAFAQMFnptVGKIVMALMV---MSCCGSLLGWQFTIAQVFKSSADEGYFPKIFSRV-TKVDAPVQGMLiivVIQS 333
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462596100 298 LTMIMLFSGDLDSLLNFLsfarwlfIGLAV-----------AGLIYLRYKC---PDMHRPFKVPLFIPALFSFTCLF 360
Cdd:PRK10655  334 LLSLMTISPSLNSQFNVL-------VNLAVvtniipyilsmAALVIIQKVAnvpPSKAKVANFIAFVGALYSFYALY 403
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
98-294 1.19e-04

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 44.20  E-value: 1.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  98 VVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMqLIKGQTQN-----FK-----DAFSGrDSSITRLP---LAFYY 164
Cdd:TIGR00913 128 FIVIINLFGVKGYGEAEFWFSSIKILAIIGFIILSII-LNCGGGPNhgyigFRywhdpGAFAG-GTIGGRFKgvcSVFVT 205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 165 GMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTI--NAEELLLSNAVAVTFSERL---LGNFS 239
Cdd:TIGR00913 206 AAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYILTLFLIGFLVpyNDPRLLSSSSSSDSAASPFviaIQNHG 285
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 240 LAV-----PIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHvRKHTPLPAVIV 294
Cdd:TIGR00913 286 IKVlphifNAVILISVLSAANSSLYASSRTLYALAHQGLAPKIFAYVD-RRGVPYVAVIV 344
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
6-292 1.71e-04

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 43.58  E-value: 1.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   6 WTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVE---LLIIRPAATAVISLAFGRYILEPFFIQCE 82
Cdd:TIGR00907  53 WIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPRQMPFASWMTgwfNLAGQVAGTASTDLSVAQLILGIVSLTTP 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  83 IPELAIKLITAVGI-----TVVMVLNSMSVSWSARIQIF------LTFCKLTAILIIIVPGVMQLIKGQTQNFKDAFSGR 151
Cdd:TIGR00907 133 GREYIPTRWHIFGImigihLIHALINSLPTKWLPRITSSaaywslLGFLTICITLLACKSPKFNDGKFVFTNFNNSTGGW 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 152 DSSITRLPLAFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAIcisMAIVTIGYVLT---NVAYFTTINAEELLLSNAVAV 228
Cdd:TIGR00907 213 KPGGFAFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAI---IGAVAIGIVTGfcfNIVLFFSMGDIDSLISSTTGQ 289
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462596100 229 TFSE---RLLGNF--SLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLP--EILSMIHVRKHTPLPAV 292
Cdd:TIGR00907 290 PIAQifyNALGNKagAIFLLCLILVTSFFCAITCMTANSRMIYAFSRDGGLPfsPLWSRVNPRTQVPLNAV 360
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
164-206 2.11e-04

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 43.39  E-value: 2.11e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2462596100 164 YGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVL 206
Cdd:PRK15238  219 FAIFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGYSL 261
cadB PRK10435
cadaverine/lysine antiporter;
2-277 9.49e-04

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 41.27  E-value: 9.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   2 SLTIWTvcGVLSLFGALS----YAELGTTIKKSGGHYTYILEVfGPLPAFVRV-------WVELLIIRPAATAVISLAFG 70
Cdd:PRK10435   37 SIAIWG--WIISIIGAMSlayvYARLATKNPQQGGPIAYAGEI-SPAFGFQTGvlyyhanWIGNLAIGITAVSYLSTFFP 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  71 ryilepfFIQCEIPElAIKLITAVGItvVMVLNSMSVSWSARiqifltFCKLTAILIIIvPGVMQLIKGQT--------Q 142
Cdd:PRK10435  114 -------VLNDPIPA-GIACIAIVWV--FTFVNMLGGTWVSR------LTTIGLVLVLI-PVVGTAIVGWHwfdaatyaA 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 143 NFKDAfSGRDSS--ITRLPLAfyygMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEEL 220
Cdd:PRK10435  177 NWNTS-DTTDGHaiIKSILLC----LWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVM 251
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2462596100 221 LLSNAVAVTFSERLLGNFSLA-VPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEI 277
Cdd:PRK10435  252 AASGAPFAISASTILGNWAAPlVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKV 309
PRK10238 PRK10238
aromatic amino acid transporter AroP;
30-331 1.13e-03

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 41.09  E-value: 1.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  30 SGGHYTYilEVFGPLPAFVRVWVELLIIRPAATAVISlAFGRYIlepffiQCEIPELAIKLITAVGITVVMVLNSMSVSW 109
Cdd:PRK10238   77 SFSHFAY--KYWGSFAGFASGWNYWVLYVLVAMAELT-AVGKYI------QFWYPEIPTWVSAAVFFVVINAINLTNVKV 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 110 SARIQIFLTFCKLTAILIIIVPGVMQLIKGQ------TQNFKDAFSGRDSSITRLPLAFYYGMYAYAGWFYLNFVTEEVE 183
Cdd:PRK10238  148 FGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNggpqatVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEAD 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 184 NPEKTIPLAICISMAIVTIGY-----VLTNVAYFTTINAEelllSNAVAVTFSE---RLLGNFSLAVPIFVALSCFgsmN 255
Cdd:PRK10238  228 NPEQSIPKATNQVIYRILIFYigslaVLLSLMPWTRVTAD----TSPFVLIFHElgdTFVANALNIVVLTAALSVY---N 300
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462596100 256 GGVFAVSRLFYVASREGHLPEILSMIHvRKHTPLPAVIVLHPLTMIMLfsgdldsLLNFLS--FARWLFIGLAVAGLI 331
Cdd:PRK10238  301 SCVYCNSRMLFGLAQQGNAPKALASVD-KRGVPVNTILVSALVTALCV-------LINYLApeSAFGLLMALVVSALV 370
proY PRK10580
putative proline-specific permease; Provisional
36-348 1.34e-03

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 40.96  E-value: 1.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  36 YILEVFGPLPAFVRVWVELLIIRPAATAVISlAFGRYILEPFfiqceiPELAIKLITAVGITVVMVLNSMSVSWSARIQI 115
Cdd:PRK10580   78 YAQENLGPLAGYITGWTYCFEILIVAIADVT-AFGIYMGVWF------PTVPHWIWVLSVVLIICAVNLMSVKVFGELEF 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 116 FLTFCKLTAILIIIVPGVMQLI-----KGQTQNFKDAFSGR---DSSITRLPLAFYYGMYAYAGWFYLNFVTEEVENPEK 187
Cdd:PRK10580  151 WFSFFKVATIIIMIVAGIGIIIwgignGGQPTGIHNLWSNGgffSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEK 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 188 TIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGNFSLAVPIFVALSC-FGSMNGGVFAVSRLFY 266
Cdd:PRK10580  231 SIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTAsLSAINSDVFGVGRMLH 310
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 267 VASREGHLPEILSMIHvRKHTPLPAVIVlhpLTMIMLFSGDLDSLLN---FLSFAR-------WLFIGLAVAGLIYLRYK 336
Cdd:PRK10580  311 GMAEQGSAPKIFSKTS-RRGIPWVTVLV---MTTALLFAVYLNYIMPenvFLVIASlatfatvWVWIMILLSQIAFRRRL 386
                         330
                  ....*....|..
gi 2462596100 337 CPDMHRPFKVPL 348
Cdd:PRK10580  387 PPEEVKALKFKV 398
PRK11387 PRK11387
S-methylmethionine permease;
18-306 1.66e-03

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 40.60  E-value: 1.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  18 LSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAfgryilePFFIQCEIPELAIKLITAVGIT 97
Cdd:PRK11387   66 QCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLTWTVALGSSLTAA-------GFCMQYWFPQVPVWPWCLLFCA 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  98 VVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPG---VMQLIKGQTQNFKDAFSGRDSS--ITRLPLAFYYGM----YA 168
Cdd:PRK11387  139 LIFGLNVVSTRFFAEGEFWFSLIKVVTILAFIVLGgaaIFGFIPMQDGSPAPGLRNLTAEgwFPHGGLPILMTMvavnFA 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 169 YAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGNFSLAVPIFVAL 248
Cdd:PRK11387  219 FSGTELIGIAAGETENPAKVIPVAIRTTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVIL 298
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2462596100 249 SCFGS-MNGGVFAVSRLFYVASREGHLPEILSMIHvRKHTPLPAVIVLHPLTMIMLFSG 306
Cdd:PRK11387  299 TAILSaANSGLYASGRMLWSLSNEGTLPACFARLT-KRGIPLTALSVSMLGGLLALFSS 356
PRK10249 PRK10249
phenylalanine transporter; Provisional
6-331 3.64e-03

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 39.58  E-value: 3.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100   6 WTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAfgryilePFFIQCEIPE 85
Cdd:PRK10249   60 YGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAA-------GIYMQYWFPD 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100  86 LAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKG---QTQNFKDAFSGRDSSITR---LP 159
Cdd:PRK10249  133 VPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGhggEKASIDNLWRYGGFFATGwngLI 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 160 LAFYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLSNAVAVTFSERLLGNFS 239
Cdd:PRK10249  213 LSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVV 292
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462596100 240 LAVPIFVAL-SCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHvRKHTPLPAvivlhpltmiMLFSGDLDSLLNFLSF- 317
Cdd:PRK10249  293 ASALNFVILvASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVS-RRGVPINS----------LMLSGAITSLVVLINYl 361
                         330
                  ....*....|....*...
gi 2462596100 318 ----ARWLFIGLAVAGLI 331
Cdd:PRK10249  362 lpqkAFGLLMALVVATLL 379
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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