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Conserved domains on  [gi|139472882|ref|YP_001129425|]
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ORF67A [Human gammaherpesvirus 8]

Protein Classification

Herpes_UL33 domain-containing protein( domain architecture ID 10507960)

Herpes_UL33 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Herpes_UL33 pfam03581
Herpesvirus UL33-like protein; This is a family of Herpesvirus proteins including UL33,UL51. ...
 4-74 7.32e-30

Herpesvirus UL33-like protein; This is a family of Herpesvirus proteins including UL33,UL51. The proteins in this family are involved in packaging viral DNA.


:

Pssm-ID: 427377  Cd Length: 72  Bit Score: 100.47  E-value: 7.32e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 139472882   4 ASDQLLPRDMQILFPTIYCRLNAINYCQYLKTFLVQRAQPAACDHTLVLESKVDTVRQVLRKIVSTDAVFS 74
Cdd:pfam03581  2 WFEPMLPREIELILPTTDARLNYLSHCQRLASFLRYVGGDGACVHGEVLERKRERFAQVISKILDLDQILE 72
 
Name Accession Description Interval E-value
Herpes_UL33 pfam03581
Herpesvirus UL33-like protein; This is a family of Herpesvirus proteins including UL33,UL51. ...
 4-74 7.32e-30

Herpesvirus UL33-like protein; This is a family of Herpesvirus proteins including UL33,UL51. The proteins in this family are involved in packaging viral DNA.


Pssm-ID: 427377  Cd Length: 72  Bit Score: 100.47  E-value: 7.32e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 139472882   4 ASDQLLPRDMQILFPTIYCRLNAINYCQYLKTFLVQRAQPAACDHTLVLESKVDTVRQVLRKIVSTDAVFS 74
Cdd:pfam03581  2 WFEPMLPREIELILPTTDARLNYLSHCQRLASFLRYVGGDGACVHGEVLERKRERFAQVISKILDLDQILE 72
 
Name Accession Description Interval E-value
Herpes_UL33 pfam03581
Herpesvirus UL33-like protein; This is a family of Herpesvirus proteins including UL33,UL51. ...
 4-74 7.32e-30

Herpesvirus UL33-like protein; This is a family of Herpesvirus proteins including UL33,UL51. The proteins in this family are involved in packaging viral DNA.


Pssm-ID: 427377  Cd Length: 72  Bit Score: 100.47  E-value: 7.32e-30
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 139472882   4 ASDQLLPRDMQILFPTIYCRLNAINYCQYLKTFLVQRAQPAACDHTLVLESKVDTVRQVLRKIVSTDAVFS 74
Cdd:pfam03581  2 WFEPMLPREIELILPTTDARLNYLSHCQRLASFLRYVGGDGACVHGEVLERKRERFAQVISKILDLDQILE 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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