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Conserved domains on  [gi|148913013|ref|YP_001293327|]
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hypothetical protein GTPV_gp129.5 [Goatpox virus Pellor]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA02836 super family cl28653
putative transmembrane protein; Provisional
 8-85 2.26e-09

putative transmembrane protein; Provisional


The actual alignment was detected with superfamily member PHA02641:

Pssm-ID: 333473  Cd Length: 188  Bit Score: 51.16  E-value: 2.26e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148913013   8 VDEYRMCFIYDKVDYINIDDPIKKYNKSTF-YGGLVGRIGRKPSKIGKLFVDFINLDLTAKKMLGDLDLLFTDILKLDD 85
Cdd:PHA02641  39 MNDFSLMFLYDTADKINDHDSLENVLEDYFaWRAHISKIDILPKNVGKLYLDLMDLDTFAKKMMGDLDILILDVLKLDE 117
 
Name Accession Description Interval E-value
PHA02641 PHA02641
hypothetical protein; Provisional
 8-85 2.26e-09

hypothetical protein; Provisional


Pssm-ID: 165023  Cd Length: 188  Bit Score: 51.16  E-value: 2.26e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148913013   8 VDEYRMCFIYDKVDYINIDDPIKKYNKSTF-YGGLVGRIGRKPSKIGKLFVDFINLDLTAKKMLGDLDLLFTDILKLDD 85
Cdd:PHA02641  39 MNDFSLMFLYDTADKINDHDSLENVLEDYFaWRAHISKIDILPKNVGKLYLDLMDLDTFAKKMMGDLDILILDVLKLDE 117
 
Name Accession Description Interval E-value
PHA02641 PHA02641
hypothetical protein; Provisional
 8-85 2.26e-09

hypothetical protein; Provisional


Pssm-ID: 165023  Cd Length: 188  Bit Score: 51.16  E-value: 2.26e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 148913013   8 VDEYRMCFIYDKVDYINIDDPIKKYNKSTF-YGGLVGRIGRKPSKIGKLFVDFINLDLTAKKMLGDLDLLFTDILKLDD 85
Cdd:PHA02641  39 MNDFSLMFLYDTADKINDHDSLENVLEDYFaWRAHISKIDILPKNVGKLYLDLMDLDTFAKKMMGDLDILILDVLKLDE 117
PHA02836 PHA02836
putative transmembrane protein; Provisional
 8-63 3.47e-05

putative transmembrane protein; Provisional


Pssm-ID: 165179  Cd Length: 153  Bit Score: 39.49  E-value: 3.47e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 148913013   8 VDEYRMCFIYDKVDYINIDDPIKKYNKSTF-YGGLVGRIGRKPSKIGKLFVDFINLD 63
Cdd:PHA02836   9 INDYSLFFAYDTANTISANDSLKNILDDYFtWRAMVGRIGFVPVGIGNLFLKLMNLN 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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