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Concise Results
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internal virion protein with endolysin domain [Pseudomonas phage LKA1]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
PHA03415
PHA03415 putative internal virion protein; Provisional
1-1003
0e+00
putative internal virion protein; Provisional
Pssm-ID: 177643
Cd Length: 1019
Bit Score: 1786.12
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 1 MA N P TP PKIQL SPE EF - A QV NA G AA TS L TQ D W S P VD Q GLAG QI A - ERE Q L L R A Q PLE L A V ADAK R ST W D TW QA GL QETET 78
Cdd:PHA03415 1 MA G P LK PKIQL PAD EF q A AL NA A AA SG L SG D N S L VD G GLAG AA A e DKA Q A L A A A PLE E A K ADAK L ST T D KV QA AA QETET 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 79 AY L L R A YL DDRDEMF PRH DPNFD I KRE Y GDIL R AHGI Q DTDD N L T ALAKA T S S EEA SW IA T GIAD K EA R EAILA R HG V VA 158
Cdd:PHA03415 81 AY I L E A MD DDRDEMF NDF DPNFD G KRE A GDIL N AHGI E DTDD H L E ALAKA G S E EEA IE IA Q GIAD H EA N EAILA K HG A VA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 159 F TT GM V DP LT I L ADIATFG GTR ALK M GRL SS A I AG G S S A V AVSA M AD Y AGKD Y EA L DYAIN F G V TAGAFAL VG G ---- R G 234
Cdd:PHA03415 161 F AS GM L DP AM I I ADIATFG ASK ALK L GRL GA A A AG A S G A T AVSA A AD V AGKD T EA F DYAIN A G L TAGAFAL FA G garl P G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 235 LDG LRSQ AG TP GA P GGMF S GL TN FLSETDKLI SP SAE S AAVLAN V VDDPVRRAGILTNDNAAS T FR V NSN IL DG T FA K W T 314
Cdd:PHA03415 241 LDG GLPG AG AA GA A GGMF R GL NA FLSETDKLI AA SAE A AAVLAN L VDDPVRRAGILTNDNAAS F FR M NSN EA DG L FA A W D 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 315 E GLEK T IA Q REG L GT FS IK M DASGRY GE A R DALERKVA E ELARRDAEW T RFGAV - AD VR LDPD VK RLADE YEQMMT QGAE 393
Cdd:PHA03415 321 D GLEK E IA K REG F GT AQ IK L DASGRY AD A K DALERKVA D ELARRDAEW S RFGAV m AD PN LDPD IA RLADE SDAFHG QGAE 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 394 LAK RQ GLAGFEDFT P RPGYFHRAW SE SK IR A L EDAY GRKT VK N LL T ESI V RG LR - L T K K EA GL I ST AIL T RT RT KAAGLR 472
Cdd:PHA03415 401 LAK DA GLAGFEDFT A RPGYFHRAW ND SK FQ A A EDAY EKGI VK K LL A ESI E RG IK g L D K D EA DA I AG AIL Q RT HD KAAGLR 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 473 P E FMGALGK T DTDAIR T ML VE AGTD D A T I K S V MG R IEQ NL D E AGKSKY S K T RLPLDM TV KI TTP DGRTI S V L D M ID T DL S 552
Cdd:PHA03415 481 P D FMGALGK A DTDAIR E ML EA AGTD A A R I E S I MG K IEQ KA D D AGKSKY G K H RLPLDM SA KI KAK DGRTI R V A D L ID R DL D 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 553 R L AENY N QQ M AGRSAL S AAG VGG DDA S I Q A LR GRY YDTL VNAKL T DADI D D R MLQFD H L MS DFTG N RP PGTV LG TT AQRA 632
Cdd:PHA03415 561 R I AENY G QQ L AGRSAL A AAG IAA DDA G I E A FK GRY LASI VNAKL P DADI A D L MLQFD G L LG DFTG H RP DANI LG AN AQRA 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 633 KSLA QS TMLAASGLWQVAEY G TLA Y RHGAA R T T AEFFKQFPG V AGLL R KAGRDPDL Y DEL S SV V GLDLARDVR V RPW L RQ 712
Cdd:PHA03415 641 KSLA DA TMLAASGLWQVAEY A TLA Q RHGAA E T G AEFFKQFPG I AGLL Q KAGRDPDL A DEL H SV L GLDLARDVR L RPW K RQ 720
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 713 YE A N L T SRDTLLDR V L YL G N QATPILNAMKF V H T HQ V RLNANLT M N TIG RAAKGDRKAL QML REY G LDD T AW G K IK KA V D 792
Cdd:PHA03415 721 HD A F L E SRDTLLDR I L HA G K QATPILNAMKF I H S HQ S RLNANLT L N KFA RAAKGDRKAL AEI REY A LDD L AW A K AE KA I D 800
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 793 DNAEFNGKN VRSM NWDGW PQ DAVDAALN VG ARIMDD T ILYGR S GQG S SFARSQLGQILGQFRSFVSFAHNKLLRGTI QNS 872
Cdd:PHA03415 801 DNAEFNGKN AQEF NWDGW AP DAVDAALN AA ARIMDD A ILYGR A GQG A SFARSQLGQILGQFRSFVSFAHNKLLRGTI NAD 880
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 873 G YT GLA V LLA H QYPLT MM MVAANE L RKGES V DLESEAGL MT LA S KAIGYTA G IGFIGDAAGI V GLTGGRGGLSAP V LGLA 952
Cdd:PHA03415 881 G PK GLA S LLA F QYPLT FL MVAANE A RKGES L DLESEAGL KK LA K KAIGYTA A IGFIGDAAGI L GLTGGRGGLSAP L LGLA 960
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*....
gi 158345182 953 N A P G SIVQ G TG HL L -------- Q GEG S EA L AD YMQ AAR T ALPF V GVMPGTAL LQN ALK E 1003
Cdd:PHA03415 961 D A L G RATG G IA HL A gisrdtsg E GEG R EA A AD IGK AAR M ALPF L GVMPGTAL ALE ALK D 1019
Name
Accession
Description
Interval
E-value
PHA03415
PHA03415 putative internal virion protein; Provisional
1-1003
0e+00
putative internal virion protein; Provisional
Pssm-ID: 177643
Cd Length: 1019
Bit Score: 1786.12
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 1 MA N P TP PKIQL SPE EF - A QV NA G AA TS L TQ D W S P VD Q GLAG QI A - ERE Q L L R A Q PLE L A V ADAK R ST W D TW QA GL QETET 78
Cdd:PHA03415 1 MA G P LK PKIQL PAD EF q A AL NA A AA SG L SG D N S L VD G GLAG AA A e DKA Q A L A A A PLE E A K ADAK L ST T D KV QA AA QETET 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 79 AY L L R A YL DDRDEMF PRH DPNFD I KRE Y GDIL R AHGI Q DTDD N L T ALAKA T S S EEA SW IA T GIAD K EA R EAILA R HG V VA 158
Cdd:PHA03415 81 AY I L E A MD DDRDEMF NDF DPNFD G KRE A GDIL N AHGI E DTDD H L E ALAKA G S E EEA IE IA Q GIAD H EA N EAILA K HG A VA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 159 F TT GM V DP LT I L ADIATFG GTR ALK M GRL SS A I AG G S S A V AVSA M AD Y AGKD Y EA L DYAIN F G V TAGAFAL VG G ---- R G 234
Cdd:PHA03415 161 F AS GM L DP AM I I ADIATFG ASK ALK L GRL GA A A AG A S G A T AVSA A AD V AGKD T EA F DYAIN A G L TAGAFAL FA G garl P G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 235 LDG LRSQ AG TP GA P GGMF S GL TN FLSETDKLI SP SAE S AAVLAN V VDDPVRRAGILTNDNAAS T FR V NSN IL DG T FA K W T 314
Cdd:PHA03415 241 LDG GLPG AG AA GA A GGMF R GL NA FLSETDKLI AA SAE A AAVLAN L VDDPVRRAGILTNDNAAS F FR M NSN EA DG L FA A W D 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 315 E GLEK T IA Q REG L GT FS IK M DASGRY GE A R DALERKVA E ELARRDAEW T RFGAV - AD VR LDPD VK RLADE YEQMMT QGAE 393
Cdd:PHA03415 321 D GLEK E IA K REG F GT AQ IK L DASGRY AD A K DALERKVA D ELARRDAEW S RFGAV m AD PN LDPD IA RLADE SDAFHG QGAE 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 394 LAK RQ GLAGFEDFT P RPGYFHRAW SE SK IR A L EDAY GRKT VK N LL T ESI V RG LR - L T K K EA GL I ST AIL T RT RT KAAGLR 472
Cdd:PHA03415 401 LAK DA GLAGFEDFT A RPGYFHRAW ND SK FQ A A EDAY EKGI VK K LL A ESI E RG IK g L D K D EA DA I AG AIL Q RT HD KAAGLR 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 473 P E FMGALGK T DTDAIR T ML VE AGTD D A T I K S V MG R IEQ NL D E AGKSKY S K T RLPLDM TV KI TTP DGRTI S V L D M ID T DL S 552
Cdd:PHA03415 481 P D FMGALGK A DTDAIR E ML EA AGTD A A R I E S I MG K IEQ KA D D AGKSKY G K H RLPLDM SA KI KAK DGRTI R V A D L ID R DL D 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 553 R L AENY N QQ M AGRSAL S AAG VGG DDA S I Q A LR GRY YDTL VNAKL T DADI D D R MLQFD H L MS DFTG N RP PGTV LG TT AQRA 632
Cdd:PHA03415 561 R I AENY G QQ L AGRSAL A AAG IAA DDA G I E A FK GRY LASI VNAKL P DADI A D L MLQFD G L LG DFTG H RP DANI LG AN AQRA 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 633 KSLA QS TMLAASGLWQVAEY G TLA Y RHGAA R T T AEFFKQFPG V AGLL R KAGRDPDL Y DEL S SV V GLDLARDVR V RPW L RQ 712
Cdd:PHA03415 641 KSLA DA TMLAASGLWQVAEY A TLA Q RHGAA E T G AEFFKQFPG I AGLL Q KAGRDPDL A DEL H SV L GLDLARDVR L RPW K RQ 720
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 713 YE A N L T SRDTLLDR V L YL G N QATPILNAMKF V H T HQ V RLNANLT M N TIG RAAKGDRKAL QML REY G LDD T AW G K IK KA V D 792
Cdd:PHA03415 721 HD A F L E SRDTLLDR I L HA G K QATPILNAMKF I H S HQ S RLNANLT L N KFA RAAKGDRKAL AEI REY A LDD L AW A K AE KA I D 800
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 793 DNAEFNGKN VRSM NWDGW PQ DAVDAALN VG ARIMDD T ILYGR S GQG S SFARSQLGQILGQFRSFVSFAHNKLLRGTI QNS 872
Cdd:PHA03415 801 DNAEFNGKN AQEF NWDGW AP DAVDAALN AA ARIMDD A ILYGR A GQG A SFARSQLGQILGQFRSFVSFAHNKLLRGTI NAD 880
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 873 G YT GLA V LLA H QYPLT MM MVAANE L RKGES V DLESEAGL MT LA S KAIGYTA G IGFIGDAAGI V GLTGGRGGLSAP V LGLA 952
Cdd:PHA03415 881 G PK GLA S LLA F QYPLT FL MVAANE A RKGES L DLESEAGL KK LA K KAIGYTA A IGFIGDAAGI L GLTGGRGGLSAP L LGLA 960
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*....
gi 158345182 953 N A P G SIVQ G TG HL L -------- Q GEG S EA L AD YMQ AAR T ALPF V GVMPGTAL LQN ALK E 1003
Cdd:PHA03415 961 D A L G RATG G IA HL A gisrdtsg E GEG R EA A AD IGK AAR M ALPF L GVMPGTAL ALE ALK D 1019
Name
Accession
Description
Interval
E-value
PHA03415
PHA03415 putative internal virion protein; Provisional
1-1003
0e+00
putative internal virion protein; Provisional
Pssm-ID: 177643
Cd Length: 1019
Bit Score: 1786.12
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 1 MA N P TP PKIQL SPE EF - A QV NA G AA TS L TQ D W S P VD Q GLAG QI A - ERE Q L L R A Q PLE L A V ADAK R ST W D TW QA GL QETET 78
Cdd:PHA03415 1 MA G P LK PKIQL PAD EF q A AL NA A AA SG L SG D N S L VD G GLAG AA A e DKA Q A L A A A PLE E A K ADAK L ST T D KV QA AA QETET 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 79 AY L L R A YL DDRDEMF PRH DPNFD I KRE Y GDIL R AHGI Q DTDD N L T ALAKA T S S EEA SW IA T GIAD K EA R EAILA R HG V VA 158
Cdd:PHA03415 81 AY I L E A MD DDRDEMF NDF DPNFD G KRE A GDIL N AHGI E DTDD H L E ALAKA G S E EEA IE IA Q GIAD H EA N EAILA K HG A VA 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 159 F TT GM V DP LT I L ADIATFG GTR ALK M GRL SS A I AG G S S A V AVSA M AD Y AGKD Y EA L DYAIN F G V TAGAFAL VG G ---- R G 234
Cdd:PHA03415 161 F AS GM L DP AM I I ADIATFG ASK ALK L GRL GA A A AG A S G A T AVSA A AD V AGKD T EA F DYAIN A G L TAGAFAL FA G garl P G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 235 LDG LRSQ AG TP GA P GGMF S GL TN FLSETDKLI SP SAE S AAVLAN V VDDPVRRAGILTNDNAAS T FR V NSN IL DG T FA K W T 314
Cdd:PHA03415 241 LDG GLPG AG AA GA A GGMF R GL NA FLSETDKLI AA SAE A AAVLAN L VDDPVRRAGILTNDNAAS F FR M NSN EA DG L FA A W D 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 315 E GLEK T IA Q REG L GT FS IK M DASGRY GE A R DALERKVA E ELARRDAEW T RFGAV - AD VR LDPD VK RLADE YEQMMT QGAE 393
Cdd:PHA03415 321 D GLEK E IA K REG F GT AQ IK L DASGRY AD A K DALERKVA D ELARRDAEW S RFGAV m AD PN LDPD IA RLADE SDAFHG QGAE 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 394 LAK RQ GLAGFEDFT P RPGYFHRAW SE SK IR A L EDAY GRKT VK N LL T ESI V RG LR - L T K K EA GL I ST AIL T RT RT KAAGLR 472
Cdd:PHA03415 401 LAK DA GLAGFEDFT A RPGYFHRAW ND SK FQ A A EDAY EKGI VK K LL A ESI E RG IK g L D K D EA DA I AG AIL Q RT HD KAAGLR 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 473 P E FMGALGK T DTDAIR T ML VE AGTD D A T I K S V MG R IEQ NL D E AGKSKY S K T RLPLDM TV KI TTP DGRTI S V L D M ID T DL S 552
Cdd:PHA03415 481 P D FMGALGK A DTDAIR E ML EA AGTD A A R I E S I MG K IEQ KA D D AGKSKY G K H RLPLDM SA KI KAK DGRTI R V A D L ID R DL D 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 553 R L AENY N QQ M AGRSAL S AAG VGG DDA S I Q A LR GRY YDTL VNAKL T DADI D D R MLQFD H L MS DFTG N RP PGTV LG TT AQRA 632
Cdd:PHA03415 561 R I AENY G QQ L AGRSAL A AAG IAA DDA G I E A FK GRY LASI VNAKL P DADI A D L MLQFD G L LG DFTG H RP DANI LG AN AQRA 640
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 633 KSLA QS TMLAASGLWQVAEY G TLA Y RHGAA R T T AEFFKQFPG V AGLL R KAGRDPDL Y DEL S SV V GLDLARDVR V RPW L RQ 712
Cdd:PHA03415 641 KSLA DA TMLAASGLWQVAEY A TLA Q RHGAA E T G AEFFKQFPG I AGLL Q KAGRDPDL A DEL H SV L GLDLARDVR L RPW K RQ 720
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 713 YE A N L T SRDTLLDR V L YL G N QATPILNAMKF V H T HQ V RLNANLT M N TIG RAAKGDRKAL QML REY G LDD T AW G K IK KA V D 792
Cdd:PHA03415 721 HD A F L E SRDTLLDR I L HA G K QATPILNAMKF I H S HQ S RLNANLT L N KFA RAAKGDRKAL AEI REY A LDD L AW A K AE KA I D 800
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 793 DNAEFNGKN VRSM NWDGW PQ DAVDAALN VG ARIMDD T ILYGR S GQG S SFARSQLGQILGQFRSFVSFAHNKLLRGTI QNS 872
Cdd:PHA03415 801 DNAEFNGKN AQEF NWDGW AP DAVDAALN AA ARIMDD A ILYGR A GQG A SFARSQLGQILGQFRSFVSFAHNKLLRGTI NAD 880
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 873 G YT GLA V LLA H QYPLT MM MVAANE L RKGES V DLESEAGL MT LA S KAIGYTA G IGFIGDAAGI V GLTGGRGGLSAP V LGLA 952
Cdd:PHA03415 881 G PK GLA S LLA F QYPLT FL MVAANE A RKGES L DLESEAGL KK LA K KAIGYTA A IGFIGDAAGI L GLTGGRGGLSAP L LGLA 960
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*....
gi 158345182 953 N A P G SIVQ G TG HL L -------- Q GEG S EA L AD YMQ AAR T ALPF V GVMPGTAL LQN ALK E 1003
Cdd:PHA03415 961 D A L G RATG G IA HL A gisrdtsg E GEG R EA A AD IGK AAR M ALPF L GVMPGTAL ALE ALK D 1019
PHA03414
PHA03414 virion protein; Provisional
253-1002
7.30e-175
virion protein; Provisional
Pssm-ID: 177642 [Multi-domain]
Cd Length: 1337
Bit Score: 545.88
E-value: 7.30e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 253 S G LT N - F L SE T D K L IS P SAESAAV L ANVV DDPVRR A G IL TNDNAAS TF R VNS N ILD G TFAKWT E GLE K TI A Q r E G L G TFS 331
Cdd:PHA03414 597 A G FV N r F F SE A D L L AQ P GEGARRL L SRLI DDPVRR D G FS TNDNAAS YL R RYR N EFE G YVKSYD E MMA K AM A E - Q G V G LTA 675
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 332 IKMD a S G R YGEA RD A L ERK V AE EL A RRD A EWT RF G A V adv R L DP D ---- V K R LAD EYEQMMTQGAEL A KRQ G LA GFEDF T 407
Cdd:PHA03414 676 RALN - S R R AMAV RD Q L NEQ V TR EL L RRD R EWT AY G S V --- R V DP N lppt I K A LAD RSDEIHGLMGQR A REA G VR GFEDF A 751
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 408 PRPGYFHR A W SE SK IRALED A y GRKTVKNLLT E SIV RG LR - L TKKE A GL I ST AI LT R T R TK A A G L R P EFMGA L G KT DT DA 486
Cdd:PHA03414 752 PRPGYFHR S W NW SK MAQMDE A - APGLARRAIS E AVF RG IP g L ERAD A DT I AQ AI VQ R A R DR A T G I R S EFMGA M G VA DT AF 830
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 487 IR TM L V EA GTDD A TIK S V M GR IEQ NLDEA G KS KY S K T RL P LDMT VK I TT p D G RTIS V L D M ID T DL S RL A ENY NQQ M A GRS 566
Cdd:PHA03414 831 IR QA L E EA NVSQ A KFD S I M AK IEQ KQSDQ G TV KY G K G RL S LDMT AE I NH - N G TVYR V Q D L ID R DL D RL M ENY AGS M S GRS 909
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 567 AL SA AG VG GD d AS I Q A LRGR Y YDTL vn A K L TDADIDDRML Q FDHLMS DFTGN R P PGTV LG TT AQRA KS L AQS TML AA SG L 646
Cdd:PHA03414 910 AL AR AG MP GD - SE I E A FIRE Y QREA -- A H L GTDKVQELTG Q LRGVFG DFTGN V P REHQ LG PV AQRA SG L TSA TML GF SG V 986
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 647 W Q V AE YG T L A Y R H G AARTTAEFFKQFP G - VA G LL R kag R D PDL Y DE LSS V V GL D LA R D V R VR PW L RQ YEAN L T S R DT LL D 725
Cdd:PHA03414 987 Y Q L AE LA T M A H R Q G VFNVMKAMLNSRM G d FV G AM R --- R N PDL A DE MQT V L GL N LA N D I R MK PW K RQ FDTF L A S Q DT FM D 1063
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 726 R V L YL G N QA T P I LN A MKF V H TH Q V R L NANLT M N TIG RAA K GD RK AL QM L RE YG l D D TA W GKIKKA V DDNAEFN G K N VR SM 805
Cdd:PHA03414 1064 R F L HA G K QA V P V LN G MKF I H NW Q S R M NANLT L N KVA RAA Q GD EA AL RV L QQ YG - K D VD W TPVLAR V RGYVTYR G R N AQ SM 1142
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 806 NW DG W P Q DA V DAAL N VGA RIMDD TI LYGR S GQ G S S FARS QL GQILGQFRSFV S FAHNKLLRGT IQ NSG YT G L A V LLA H QY 885
Cdd:PHA03414 1143 NW GA W S Q AD V NTVM N TAL RIMDD SL LYGR V GQ N S G FARS PV GQILGQFRSFV A FAHNKLLRGT YE NSG VL G V A S LLA F QY 1222
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 886 PLT MM M VA A NELRK G ESV dl E S EA G LMTL A SKA IGYTAG I GF IG D AA G I V glt G G RGGL SAPV L GLA NAPGSIVQ G TGH L 965
Cdd:PHA03414 1223 PLT AL M MG A KAAIN G KFD -- T S DE G IRKM A IDG IGYTAG L GF TA D MW G V V --- T G HSRM SAPV F GLA EHSNEVFR G VKD L 1297
730 740 750
....*....|....*....|....*....|....*...
gi 158345182 966 LQ G EG - SE A LA D YMQA A RT ALPFV G V M P G T A LL QNAL K 1002
Cdd:PHA03414 1298 VT G DD p AA A TG D IVSG A AG ALPFV N V F P A T K LL LESI K 1335
PHA03413
PHA03413 putative internal core protein; Provisional
323-908
1.38e-32
putative internal core protein; Provisional
Pssm-ID: 177641
Cd Length: 1304
Bit Score: 137.13
E-value: 1.38e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 323 QRE G L GTF SIKMDAS g RYGE AR D A L E R K VAEE L arr DA EWTRFG A VADVRLDP - D VKR L A D E Y EQ -- MMTQGA E LAKRQ G 399
Cdd:PHA03413 655 DKH G I GTF DMFFHRA - KARA AR A A E E D K LSKY L --- DA AYSADK A GRAIPTPD a D IAP L V D A Y RD sg WAEKWH E HLLKA G 730
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 400 L AGFED F TPRPG YF H R AW S ES K I R ALEDAYGRKTVKNL L TESIVRGL -- RLTKKE A GLISTAILTRTRTKA AG LR - P EFM 476
Cdd:PHA03413 731 L IDADA F PKSDY YF P R QY S YD K M R NGIAQGIELDDVKA L FRFALQDT yp NMDGEL A ARVADEMVDGIVNGR AG QG g P MWK 810
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 477 GALGKT D T D AIRTM L VE AG T DD AT I KSVM gri EQ N LD E A G ----- K SKYSKTRLP LD MTVK I ttp DG RTISVL D MI DTD L 551
Cdd:PHA03413 811 NLINGM D N D ELFMA L RD AG V DD DA I NEFL --- AG N VP E S G stapa K NLRNRLDFN LD KEFD I --- DG DSLRLQ D IL DTD T 884
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 552 SR L AEN Y NQQ M A GR S A LSA AG V --- G GD D AS I QALRGRYY D T lvn A KLTDADI DD RM lqf D HLMS dftgn RP P GTV -- LG 626
Cdd:PHA03413 885 AG L MHG Y TNR M S GR V A FAN AG I qdl G AL D KM I DESKHALA D G --- A ESWEKAV DD TI --- D FILG ----- GA P ADS gd IP 953
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 627 TTAQR A KS LA QS TML AA SGL W Q VAEYGTLAYRH G A AR TTAEFFK Q fpgva GL LRK A G --- R DPD LYDE L S S VVGLDLARD 703
Cdd:PHA03413 954 ELLRA A GN LA NA TML KN SGL Y Q LTDIAIAMKEF G L AR VLRGLAD Q ----- GL FKE A D aai A DPD MAAR L D S ILNGAIQKE 1028
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 704 V R V R p WLRQ Y --- EAN LT SRDTLLDRVLY LG n QA TPIL N AMKF VH THQVR LNA NLTMNTIGRAA KGD RK A LQM L R E Y GL D 780
Cdd:PHA03413 1029 A R F R - HIHT Y add NLD LT NQAAAFNTTQN LG - QA ARHA N GFSM VH RLMAN LNA GIIADELENMF KGD AE A FKA L E E F GL T 1106
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 781 DTAWGKIKK A vddnaef N GK N VRSM nwdg W P Q D AVDAALN VG A R I MD DTILYG R S G QG S S FA R - SQL G Q I LGQFR SF VSF 859
Cdd:PHA03413 1107 PEIADQAIA A ------- N AA N PGAL ---- F P P D LQMEIEI VG T R A MD SLMQNI R T G ET S H FA Q f NPI G K I IVGYQ SF AIA 1175
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 158345182 860 A H NK L LR GTIQNSGYT GLA VLL A H Q Y PL TMMMVA A NELRK G ESV D LES E 908
Cdd:PHA03413 1176 A T NK I LR RELNDADWA GLA HIM A Y Q F PL MLLATH A KHALD G KDA D SPK E 1224
PHA03414
PHA03414 virion protein; Provisional
97-231
4.84e-16
virion protein; Provisional
Pssm-ID: 177642 [Multi-domain]
Cd Length: 1337
Bit Score: 83.64
E-value: 4.84e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158345182 97 DPNFD IKREYGDI L R A H GIQ D TD DN L TAL A K A TSS E E A SWIATG I ADK E AR E A I LARHGVVA F TT GM V DP LTILA D IA TF 176
Cdd:PHA03414 108 DPNFD AGTYGVQA L Q A A GIQ P TD NY L QIM A R A GNA E D A AYLLSR I QRY E QD E Q I VRDNPYWN F AA GM L DP AALAV D AV TF 187
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 158345182 177 G GT RAL KM GR LSS A I AGG SSA V AVS A MA D Y AG K D YE A LD Y AINFGVT AG AF AL V G 231
Cdd:PHA03414 188 G AG RAL RL GR AGM A A AGG AGQ V GYV A GL D A AG A D VD A GT Y IVAGALG AG VG AL L G 242
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
