|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 738.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNSLMLWINTTSYSLVISLTTLLLL--NQTNNTNFSLTFFSDPLSTPLLILTAWLLPLMIMAS 78
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLnqPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 79 QFHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPL 158
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 159 LVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 238
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 239 YGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHG 318
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 319 LTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNV 398
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 166851886 399 LITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTILGPTY 457
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 592.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNSLMLWINTTSYSLVISLTTLLLLNQTNNTNFSLT--FFSDPLSTPLLILTAWLLPLMIMAS 78
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTqwLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 79 QFHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPL 158
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 159 LVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 238
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 239 YGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHG 318
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 319 LTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNV 398
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 166851886 399 LITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTILGP 455
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 558.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNSLMLWINTTSYSLVISLTTLLLLNQTN-NTNFSLTFFS-DPLSTPLLILTAWLLPLMIMAS 78
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSeTMNFTNKYFGiDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 79 QFHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPL 158
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 159 LVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 238
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 239 YGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHG 318
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 319 LTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNV 398
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 166851886 399 LITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTILG 454
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
9.84e-170 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 484.84 E-value: 9.84e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNSLMLWINTTSYSLVI---SLTTLLLLNQTNNTNFSLTFFSDPLSTPLLILTAWLLPLMIMA 77
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIalaSLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 78 SQFHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLP 157
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 158 LLVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLG 237
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 238 GYGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAH 317
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 318 GLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLN 397
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 166851886 398 VLITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTILGPT 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-452 |
1.45e-159 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 458.63 E-value: 1.45e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 3 KIIVPTIMLLPLTWYSNSLMLWINTTSYSLVISLTTLLLLNQTNNTNFSLTFF---SDPLSTPLLILTAWLLPLMIMASQ 79
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLylsYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 80 FHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLL 159
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 160 VALIYTHKTLGSLNLPTLLLWLKElpnSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 239
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 240 GMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGL 319
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 320 TSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNVL 399
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 166851886 400 ITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTI 452
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-453 |
1.69e-142 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 415.53 E-value: 1.69e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNSLMLWINTTSYSLVISLTTLLLLNQTNNTNF---SLTFFSDPLSTPLLILTAWLLPLMIMA 77
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWhnlSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 78 SQFHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLP 157
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 158 LLVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLG 237
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 238 GYGMMRITSIL-EPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIA 316
Cdd:MTH00044 241 GYGLIRLINLFsLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 317 HGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGL 396
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 166851886 397 NVLITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTIL 453
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-449 |
2.04e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 345.99 E-value: 2.04e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNslMLWINTTSYSLVISLTTLLLLNQTNNTNFSLTFFSDPLSTPLLILTAWLLPLMIMASQF 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKN--SWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSES 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 81 HLTKEPLPRKKLYIsaLITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLV 160
Cdd:MTH00163 79 VYKKNNYSNLFLFL--ILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 161 ALIYTHKTLGSLNLPTLLLwlkelpNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYG 240
Cdd:MTH00163 157 GIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYG 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 241 MMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLT 320
Cdd:MTH00163 231 LLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLC 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 321 SSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNVLI 400
Cdd:MTH00163 311 SSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFF 390
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 166851886 401 TALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNP 449
Cdd:MTH00163 391 SAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKS 439
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
50-449 |
5.00e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 331.03 E-value: 5.00e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTPLLILTAWLLPLMIMASQFhlTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLI 129
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 130 LITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWsntLLWMACIMAFMVKMPLYG 209
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 210 FHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSV 289
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 290 SHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPP 369
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 370 SINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNP 449
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
50-452 |
4.88e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 314.22 E-value: 4.88e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTPLLILTAWLLPLMIMASQFHLTKEPlpRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLI 129
Cdd:MTH00205 49 ISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK--NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 130 LITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKelpNSWSNTLLWMACIMAFMVKMPLYG 209
Cdd:MTH00205 127 LILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNF---SDFYLFLYWIFLMLAFLVKLPMYF 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 210 FHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSV 289
Cdd:MTH00205 204 VHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSV 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 290 SHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPP 369
Cdd:MTH00205 284 GHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPP 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 370 SINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNP 449
Cdd:MTH00205 364 SLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKL 443
|
...
gi 166851886 450 KTI 452
Cdd:MTH00205 444 KIF 446
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-452 |
3.84e-99 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 304.36 E-value: 3.84e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNSlMLWINTTSYSLVISLTTLLLL--NQTNNTNFSLTFFSDPLSTPLLILTAWLLPLMIMAS 78
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYP-WSWALTFSTLLLLSLFTLLNLypMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 79 QFHLTKEPLPrkKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPL 158
Cdd:MTH00014 80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 159 LVALIYTHKTLGSLNLPTLLLwlkELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 238
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSM---EPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 239 YGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHG 318
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 319 LTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNV 398
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 166851886 399 LITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTI 452
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-456 |
2.50e-74 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 241.14 E-value: 2.50e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASqfhlTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QmERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSnTLLWMACIMAFMVKMPLYGFHLWLPK 216
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 217 AHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLM-LCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMV 295
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAaLGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 296 TMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIG 375
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 376 ELFVIMTTFSWSNFTIILTGLNVLITALysmYMLTMTQR---GKITYHTHNIKPSFTRENTLMSMHITPLLLLSLNPKTI 452
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAA---YLLWMYQRvffGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
|
....
gi 166851886 453 LGPT 456
Cdd:COG1008 472 LDLI 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-457 |
2.03e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 230.98 E-value: 2.03e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASQFHLTKeplpRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QmERLNAGLYFLFYTLTGSLPLLVALIYThKTLGSLNLPTLLLWLKELPNSWsNTLLWMACIMAFMVKMPLYGFHLWLPK 216
Cdd:TIGR01972 152 P-NRIYAAMKFFLYTLAGSLLMLLAILGL-YFLGGGTFDLLELLNLPLPFGV-QTWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 217 AHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLM-LCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMV 295
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAaLGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 296 TMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIG 375
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 376 ELFVIMTTFSWSNFTIILTGLNVLITALYSMYMLTMTQRGKITYHTHNIKPSF-TRENTLMSMHITPLLLLSLNPKTILG 454
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLnGREIAVLAPLVVLILFLGLYPNPLLD 468
|
...
gi 166851886 455 PTY 457
Cdd:TIGR01972 469 LTE 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-456 |
5.33e-68 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 225.08 E-value: 5.33e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASQFHLTKeplpRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QmERLNAGLYFLFYTLTGSLPLLVALIY----THKTLGSLNLPTLLLWlkELPNSWSnTLLWMACIMAFMVKMPLYGFHL 212
Cdd:PRK05846 157 K-NRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNL--PLPPGVQ-YWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 213 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLM-LCIWGMIMTSSICLRQTDLKSLIAYSSVSH 291
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 292 MAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSI 371
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 372 NLIGELFVIMTTFSWSNFTIILTGLNVLITALysmYMLTMTQR---GKITYHTHNIKPSFTRENTLMSMHITPLLLLSLN 448
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAV---YSLWLYQRvmfGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVY 469
|
....*...
gi 166851886 449 PKTILGPT 456
Cdd:PRK05846 470 PKPLLDVI 477
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
111-396 |
1.38e-62 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 204.85 E-value: 1.38e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 111 TELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSN 190
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 191 TLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLMLCIWGMIMT 270
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 271 SSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANS-NYERIHSRTMLLARGLQTL 349
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 166851886 350 LPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGL 396
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-408 |
2.26e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 209.92 E-value: 2.26e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 51 SLTFFSDPLSTPLLILTAWLLPLMIMASQ---FHLTKEplprkklYISALITLQLSLIMTFTVTELALFYILFETTLIPT 127
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWksiKFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 128 LILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWlkELPnswSNTLLWM--ACIMAFMVKM 205
Cdd:MTH00204 149 FLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--KLP---LSIQKWLlvGFFLSLAVKI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 206 PLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPF-LMLCIWGMIMTSSICLRQTDLKSLI 284
Cdd:MTH00204 224 PQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 285 AYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLAN 364
Cdd:MTH00204 304 AYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 166851886 365 LALPPSINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMYM 408
Cdd:MTH00204 384 MGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-408 |
6.97e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 208.37 E-value: 6.97e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 51 SLTFFSDPLSTPLLILTAWLLPLMIMAS----QFhLTKEplprkklYISALITLQLSLIMTFTVTELALFYILFETTLIP 126
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILISwnsiKF-LIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIP 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 127 TLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWlkELPNSWSNtLLWMACIMAFMVKMP 206
Cdd:MTH00217 145 MFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCL--KIEKELQY-FIFLGFFLSLAIKIP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 207 LYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLM-LCIWGMIMTSSICLRQTDLKSLIA 285
Cdd:MTH00217 222 KIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 286 YSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANL 365
Cdd:MTH00217 302 YSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANA 381
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 166851886 366 ALPPSINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMYM 408
Cdd:MTH00217 382 SIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-407 |
1.17e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 197.84 E-value: 1.17e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 52 LTFFSDPLSTPLLILTAWLLPLMIMASqFHLTKEPLprkKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILI 131
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILIS-WHSVKYLT---KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 132 TRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSwSNTLLWMACIMAFMVKMPLYGFH 211
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQ-TQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 212 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYP-FLMLCIWGMIMTSSICLRQTDLKSLIAYSSVS 290
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPaVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 291 HMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPS 370
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 166851886 371 INLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMY 407
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
115-439 |
4.27e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 151.21 E-value: 4.27e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 115 LFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLgslnlptlLLWLKELPNSWSNTLLw 194
Cdd:MTH00094 86 MLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFF--------SLCYFDFFLSWEMFFI- 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 195 maCIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLtkhMIYPFLMLCIWGMIMTSSIC 274
Cdd:MTH00094 157 --LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCC 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 275 LRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMA 354
Cdd:MTH00094 232 VFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 355 TWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMYMLTMTQRGKITYHTHNIKPSFTRENTL 434
Cdd:MTH00094 312 LIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVF 391
|
....*
gi 166851886 435 MSMHI 439
Cdd:MTH00094 392 MMFNM 396
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-414 |
6.09e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 147.10 E-value: 6.09e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASqFHLTKEPlprkKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QmERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSnTLLWMACIMAFMVKMPLYGFHLWLPK 216
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 217 AHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLM-LCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMV 295
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAiLGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 296 TMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIG 375
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 166851886 376 ELFVIMTTFSWSNFTIILTGLNVLITA----LYSMYMLTMTQR 414
Cdd:PRK12561 371 ELTVFLGITSSDVYSSTFRTITILLAAvgliLTPIYLLSMLRR 413
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-414 |
2.82e-38 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 145.23 E-value: 2.82e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASQfhltkEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QmERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSwSNTLLWMACIMAFMVKMPLYGFHLWLPK 216
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 217 AHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFL-MLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMV 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 296 TMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGL---QTLLPLMATWWLLASLANLALPPSIN 372
Cdd:PRK06473 311 LLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 166851886 373 LIGELFVIMTTFswsNFTIILTGLNVLITALYSMYMLTMTQR 414
Cdd:PRK06473 391 FIAEFLVFRGSF---PIFPVQTLLCMIGTGLTAVYFLLLVNR 429
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
50-406 |
2.26e-37 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 141.44 E-value: 2.26e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTPLLILTAWLLPLMIMASQFHLTKEPlpRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLI 129
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 130 LITRWGNQmERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACImAFMVKMPLYG 209
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLV-GFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 210 FHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-TSILEPLTKHMIYPFLMLC-IWGMIMTSSICLRQTDLKSLIAYS 287
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLgLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 288 SVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLAL 367
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 166851886 368 PPSINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSM 406
Cdd:COG0651 384 PPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYF 422
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-409 |
4.72e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 128.29 E-value: 4.72e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 56 SDPLSTPLLILTAWLLPLMIMASqFHLTKEPlprkKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWG 135
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA-WPVTFKP----KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 136 NQmERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSNtLLWMACIMAFMVKMPLYGFHLWLP 215
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 216 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFL-MLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAM 294
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 295 VTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLI 374
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 166851886 375 GEL--FVIMTTFSWSNFT-----IILTGLNVLITALYSMYML 409
Cdd:PRK02546 398 AELmvFVGFATSDAYTLPfrvvvVFLAAVGVILTPIYLLSML 439
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-421 |
2.16e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 120.20 E-value: 2.16e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASQfhltkEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QmERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSwSNTLLWMACIMAFMVKMPLYGFHLWLPK 216
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 217 AHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPflMLCIWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 293
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 294 MVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTL---LPLMATWWLLASLANLALPPS 370
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 166851886 371 INLIGELFVIMTTFSWSNFTIILTGLNVLITALYSMYMLTMTQRGKITYHT 421
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKL 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-428 |
1.12e-28 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 118.12 E-value: 1.12e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASQfHLTKEPlprkKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW-PVTRNS----RLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QmERLNAGLYFLFYTLTGSLPLLVALIythkTLGSLNLPTLLLWLKELPN-SWSNTL---LWMACIMAFMVKMPLYGFHL 212
Cdd:CHL00011 158 K-KRLYSATKFILYTAGGSIFLLIGVL----GMGLYGSNEPTLNFETLANqSYPVALeilFYIGFLIAYAVKLPIIPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 213 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLMLC-IWGMIMTSSICLRQTDLKSLIAYSSVSH 291
Cdd:CHL00011 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVgAIQIIYAASTSLGQRNLKKRIAYSSVSH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 292 MAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIhsRTMLLAR--GLQTLLPLMATWWLLASLANLALPP 369
Cdd:CHL00011 313 MGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPG 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166851886 370 SINLIGELFV---IMTTFSWS-NFTIILTGLNVLITALYSMYMLTMTQRGKITYHTHNIKPSF 428
Cdd:CHL00011 391 MSGFVAELIVffgIITSQKYLlMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSY 453
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-107 |
5.24e-19 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 82.19 E-value: 5.24e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 1 MLKIIVPTIMLLPLTWYSNSLMLWINTTSYSLVI---SLTTLLLLNQTNNTNFSLTFFSDPLSTPLLILTAWLLPLMIMA 77
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLallSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 166851886 78 SQFHLTKEPLPRKKLYISALITLQLSLIMT 107
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
211-447 |
2.49e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 84.21 E-value: 2.49e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 211 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPlTKHMIYPFLMLCIWGM--IMTSSICL-RQTDLKSLIAYS 287
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDA-AIGSDFPGRLLLIFGLlsVLVAAFFLlRQRDIKRLFAYS 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 288 SVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLAL 367
Cdd:PRK06458 313 SIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGM 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 368 PPSINLIGELFVIMTTFS---WSNFTIILTGLNVLITALysMYMLTMTQRGKityHTHNIKPSFTRENTLMSMHITPLLL 444
Cdd:PRK06458 393 PPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL--VRRVAGMVFGE---PPEAVNRGDLGWLTTSPMFVHLVLV 467
|
...
gi 166851886 445 LSL 447
Cdd:PRK06458 468 LVL 470
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-420 |
2.72e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 84.16 E-value: 2.72e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 51 SLTFFSDPLSTPLLILTAwllpLMIMASQFHLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLIL 130
Cdd:PRK08375 70 GIELRADSLSALFLLVTS----ILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 131 ITRWGNQmERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSwsNTLLWMACImAFMVKMPLYGF 210
Cdd:PRK08375 146 VAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTV--VTAFGFVLL-ALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 211 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITS----ILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAY 286
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 287 SSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLA 366
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIG 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 166851886 367 LPPSINLIGELFVIMTTFSwsnftiilTGLNVLITALYSMYMLTMTQRGKITYH 420
Cdd:PRK08375 382 VPPTSGFVSKWYLVVGAVE--------AGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-369 |
6.57e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 83.10 E-value: 6.57e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASQFHLTKEPLPrkKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGN 136
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGP--EWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 137 QMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGS---------LNLPTLLLWLKELPN-SWSNTLLWMACIMAFMVKMP 206
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTlnmadlsakIRGLSFPLTGGLAGNpPLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 207 LYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-------TSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTD 279
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 280 LKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLL 359
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330
....*....|
gi 166851886 360 ASLANLALPP 369
Cdd:PRK12667 399 GALSLVGIPP 408
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
92-393 |
1.20e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 78.43 E-value: 1.20e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 92 LYISALITLQLSL---IMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKT 168
Cdd:MTH00062 69 LSGVSRFFLFLSLifsILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 169 LGSLNLPtlllwlkeLPNSWSNTLLWMACIMAFM--VKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITS 246
Cdd:MTH00062 149 NGSFNFS--------DWGSDDSVSLIVYYVLSFMfiTKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 247 ILEPLTkhmIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMaMVTMAILIQTPWSFMGATTLM-IAHGLTSSLLF 325
Cdd:MTH00062 221 FIFSGS---FLGYLFLCCLFSVFFLITACSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVF 296
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 166851886 326 CLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIIL 393
Cdd:MTH00062 297 LLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-410 |
2.23e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 72.07 E-value: 2.23e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTPLLILTAWLLPLMIMASQFHLTKEPLPRKKLYISALITL-QLSLIMTFTVTELALFYILFETTLIPTL 128
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALfILSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 129 ILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPnswsntLLWMACIMAFMVKMPLY 208
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 209 GFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR-ITSILEPltkHMIYPFLMLcIWGMI---MTSSICLRQTDLKSLI 284
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRfLMDVLSP---ELWWGVLIL-LAGSIsalLGVIYALKEHDLKGLL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 285 AYSSVSHMAMVTMAILIQTPWSFMGATTLM-----------IAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLM 353
Cdd:PRK08667 299 AYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYT 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 166851886 354 ATWWLLASLANLALPPSINLIGELFVIMTTFswSNFTIILTGLNVLITALYSMYMLT 410
Cdd:PRK08667 379 SALFLVGAVSIAALPPFNGFASELLLYESFF--QSFSVADPLIKILLFSVLAIFALT 433
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
91-325 |
2.80e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 71.71 E-value: 2.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 91 KLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWgNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTL- 169
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLFSLTr 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 170 -----GSLNLPTLLLWLKELPNSWSnTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI 244
Cdd:PRK08676 181 qalgtGTLNWTELAAHASLLSPSVL-GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 245 TSILEPLTKHMIYPFLMLcIWGMIMTSSIC---LRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTS 321
Cdd:PRK08676 260 SALLRQSGAAEQFSNVLI-GLGIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVK 338
|
....
gi 166851886 322 SLLF 325
Cdd:PRK08676 339 SGLF 342
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
84-295 |
2.52e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 65.93 E-value: 2.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 84 KEPLPRKKLYisaLITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALI 163
Cdd:PRK12646 106 KDNLPRFYFY---LTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFI 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 164 YTHKTLGSLNLPTLLLWLKELPNS-WSNTLLWMACIMAFmVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGM 241
Cdd:PRK12646 183 MLYIMTGTNNITEILGQADHIKNHgLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLL 260
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 166851886 242 MRITSILEpLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMV 295
Cdd:PRK12646 261 FRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
87-403 |
1.54e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 63.40 E-value: 1.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 87 LPRKKLYISALITLQLSLIMTftvTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTH 166
Cdd:PRK12647 94 LGRFYSYILLFMASMLGLVLS---DNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLG 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 167 KTLGSLNLPTLLLWLKELPNS-WSNTLLWMACIMAFmVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRi 244
Cdd:PRK12647 171 NVTGTYSLSELLASGDVIREHpLYLAILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR- 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 245 tsiLEPLTKHMIYPFLMLCIWG---MIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTS 321
Cdd:PRK12647 248 ---LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYK 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 322 SLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGLNVLIT 401
Cdd:PRK12647 325 GALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGN 404
|
..
gi 166851886 402 AL 403
Cdd:PRK12647 405 AL 406
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-406 |
3.01e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 62.27 E-value: 3.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTPLLILTAWLLPLMIMASQFHLTKEplpRKKLYISALITLQLS-LIMTFTVTELALFYILFETTLIPTL 128
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSVLFMLAgVNGAFLTGDIFNLFVFFEVMLMASY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 129 ILITRWGNQMErLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSN--TLLWMACIMAFMVKMP 206
Cdd:PRK07691 146 VLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGliTVVAILFLFVFATKAG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 207 LYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLM-LCIWGMIMTSSICLRQTDLKSLIA 285
Cdd:PRK07691 225 LFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILiLALLTIIFGVIGAVAYFDIKKIII 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 286 YSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANL 365
Cdd:PRK07691 305 YNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 166851886 366 ALPPSINLIGELFVIMTTFSWSNFTIILTGLNVLITALYSM 406
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
50-330 |
3.01e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 62.27 E-value: 3.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTpLLILTAWLLPLMIMASQFHlTKEPLPRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLI 129
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMAYGFG-DIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 130 LITrWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFMVKMPLYG 209
Cdd:PRK12663 147 LIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 210 FHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFL--MLCIwGMIMTSSICLRQTDLKSLIAYS 287
Cdd:PRK12663 226 FM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGYQ 303
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 166851886 288 SVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANS 330
Cdd:PRK12663 304 VISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGS 346
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
70-328 |
5.22e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.98 E-value: 5.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 70 LLPLMIMASQFHLTKEPLPRKKLYIS--ALITL-QLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMErlNAGLY 146
Cdd:PRK12650 86 LLALVIGAVVFIYSARYLPRKKGNTSfyLLMTAfMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIR 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 147 FLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGS 226
Cdd:PRK12650 164 TLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSA 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 227 MVLAAVLLKLGGYGMMRITSILEPLTKHMIypflMLCIWGM---IMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQT 303
Cdd:PRK12650 244 FLHAAAVVKAGIYLLLRFSPVFHDVAVWNW----LLIIVGMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGT 319
|
250 260
....*....|....*....|....*
gi 166851886 304 PWSFMGATTLMIAHGLTSSLLFCLA 328
Cdd:PRK12650 320 PFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
108-325 |
9.45e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 60.78 E-value: 9.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 108 FTVTELALFYILFETTLIPTLILITRwGNQMERLNAGLYFLFYTLtGSLPLLVALIYTHKTLGSLNLPTLLlwlKELPNS 187
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADIS---QGLIND 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 188 WSNTLLWMAC--IMAFMV-KMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILePLTKHMI-------- 256
Cdd:PRK08668 190 TSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgv 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166851886 257 ----YPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLF 325
Cdd:PRK08668 269 plfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
117-325 |
1.31e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.98 E-value: 1.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 117 YILFETTLIPTLILITRwGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPnSWSNTLLWMA 196
Cdd:PRK12665 137 YVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP-SGTRTALFAV 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 197 CIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPltKHMIYPFLMLC-IWGMIMTSSICL 275
Cdd:PRK12665 215 LLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP--GGGLDTLLMVVaLLTMVVGILGAI 292
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 166851886 276 RQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLF 325
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-337 |
2.19e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.20 E-value: 2.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTPLLILTAwllpLMIMASQFHLTKEPlpRKKLYISALITLQLSLIMTFTVTELALFYILFETTLIPTLI 129
Cdd:PRK07234 59 FGVTLRADALSGYFILTNA----LVTLAVIFYCWESA--KTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 130 LITrWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKElpnswSNTLLwmacIMAFMVKMPLYG 209
Cdd:PRK07234 133 LVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPE-----AFALI----ALGLLVKGGIFV 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 210 FHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPltkhmiyPFLMLCIWGM---IMTSSICLRQTDLKSLIAY 286
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPG-------LDLIVRIFGVgtaLLGVLFALLEKDLKRMLAF 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 166851886 287 SSVSHMAMVTMAILIqtpwsfmgATTLMIAHGLTSSLLFCLANSNYERIHS 337
Cdd:PRK07234 276 STISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFT 318
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
198-385 |
1.07e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 57.08 E-value: 1.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 198 IMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLT--KHMIYPFLMLCIWGMIMTSSICL 275
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 276 RQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMAT 355
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190
....*....|....*....|....*....|
gi 166851886 356 WWLLASLANLALPPSINLIGELFVIMTTFS 385
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
81-399 |
2.16e-08 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 56.14 E-value: 2.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 81 HLTKEPLPRKKLYISALITLQLSLIMTFTVTELALFyilFETTLIPTLILITRWGNQmERLNAGLYFLFYTLTGSLPLLV 160
Cdd:PRK06525 106 HPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLF---FEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 161 ALIYTHKTLGSLNLPTLLLWLKELpnswsNTLLWMACIMAFMVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGY 239
Cdd:PRK06525 182 AAATLFLQTGTFALSALSGLHGSL-----KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVY 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 240 GMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQ---TPWSFMGATTLMIA 316
Cdd:PRK06525 256 IFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFN 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 317 HGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFTIILTGL 396
Cdd:PRK06525 336 HAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPA 415
|
...
gi 166851886 397 NVL 399
Cdd:PRK06525 416 MVL 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-297 |
8.86e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 54.45 E-value: 8.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 51 SLTFFSDPLSTPL-LILTAWLLPLMIMASQFHLTKEPLPRkklYISALITLQLSLI-MTFTVTELALFyILFETTLIPTL 128
Cdd:PRK12649 73 EFSIYADGLAVLIgLIASGIGVIIMSYSNGYMSHKEDLPR---YYQYLLLFMGSMIgMVFSGNTIQLF-IFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 129 ILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKELPNSWSNTLLWMACIMAFM---VKM 205
Cdd:PRK12649 149 MLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 206 PLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITSILEPLTKHMIYpFLMLCIWGMIMTSSICLRQTDLKSLI 284
Cdd:PRK12649 229 AQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFSGTEAWFIL-VSGTGMITMVLAGFLAFRQTDIKAIL 306
|
250
....*....|....
gi 166851886 285 AYSSVSHMA-MVTM 297
Cdd:PRK12649 307 AYSTISQLAyLMTM 320
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
210-429 |
8.69e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 51.31 E-value: 8.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 210 FHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITSILE--PLTkhmiypFLMLCIWG---MIMTSSICLRQTDLKSL 283
Cdd:COG1009 230 LHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFAlsPVW------LTVVAIIGaitALFAALIALAQTDIKRV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 284 IAYSSVSHMAMVTMAILIQtpwSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLA 363
Cdd:COG1009 303 LAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALS 379
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166851886 364 NLALPPSINLIGELFVIMTTFSWSNFTIILTGLNVL---ITALYSMYMLTMT----QRGKITYHTHNIKPSFT 429
Cdd:COG1009 380 LAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPKTPKHPHESPWLMT 452
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
9-409 |
9.48e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 51.10 E-value: 9.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 9 IMLLPLTWYSNSL-MLWINTTSYSLVISLTTLLLLNQTNNTNFSLT----FFSDPLSTPLLILTAWLLPLMIMASQFHLT 83
Cdd:TIGR01770 16 ILLLYGLFYSRKKrNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTgfsfFIVDNFALLIKLILLLSTLLTFFFALSYLS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 84 KEPLPRKKLYISALITLQLSLIMTFTVtELALFYILFETTLIPTLILITRWGNQMERLNAGL-YFLFYTLTGSLPLL-VA 161
Cdd:TIGR01770 96 KEKINKFEFYILLLFALLGIFLLVSSN-DLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGLLLFgIS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 162 LIYTHKtlGSLNLPTLLLWLKELPNSWSNTLLWMACIM-AFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYG 240
Cdd:TIGR01770 175 LIYGFT--GSLNFEDLLLFLSNGMLNISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAV 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 241 MMRITSILEPLTKHMIYPFLMLCIWG-MIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGL 319
Cdd:TIGR01770 253 FLRLFLYILFGFSEAWQIFLAIIAFLsMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYAL 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 320 TS----SLLFCLANSNYERIHSrtMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSwSNFtIILTG 395
Cdd:TIGR01770 333 MSlgafGVLSLLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK-SGL-YWLAV 408
|
410
....*....|....
gi 166851886 396 LNVLITALYSMYML 409
Cdd:TIGR01770 409 IAVLTSVIGAFYYL 422
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-325 |
1.28e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.50 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 50 FSLTFFSDPLSTPLLILTAWLLPLMIMASQFHLTKEPLPRKKLYISALITLQLSLIMTFTvTELALFYILFETTLIPTLI 129
Cdd:COG1007 62 FGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMASA-NDLLTLFLGLELLSLSLYV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 130 LITRWGNQMERLNAGL-YFLFYTLTGSLPLL-VALIYThkTLGSLNLPTLLLWLKELPNSwsNTLLWMACIM---AFMVK 204
Cdd:COG1007 141 LVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLYG--ATGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGLAFK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 205 MPLYGFHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRI-TSILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKS 282
Cdd:COG1007 217 LSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKR 295
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 166851886 283 LIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLF 325
Cdd:COG1007 296 MLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-330 |
4.05e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.96 E-value: 4.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 203 VKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT-----SILEPLTKHMIYPFLMLCIWGMIMTSSICLRQ 277
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 166851886 278 TDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANS 330
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGS 353
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-325 |
9.15e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 48.38 E-value: 9.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 113 LALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLllwlkeLPNSWSNTL 192
Cdd:PRK12644 128 LLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL------LADPPTGPA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 193 LWMA--CIMAFMV-KMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITsilePLTKHMIYPFLMLCIWG-- 266
Cdd:PRK12644 202 VSVAvvLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPVWRPTVLVLGla 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 267 -MIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLF 325
Cdd:PRK12644 277 tMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
146-325 |
9.54e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 47.97 E-value: 9.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 146 YFLFYTLTGSLpLLVALIYTHKTLGSLNLPTLLLWlkelpnswSNTLLWMACImAFMVKMPLYGFHLWLPKAHVEAPIAG 225
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGL--------GGTAAWLILI-GFGVNAAFPPLHAWLPDAYPEATVTG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 226 SMVLAAVLLKLGGYGMMRitsilepltkhmIYPFLMLCIW-GMIMT---SSICLRQTDLKSLIAYSSVSHMAMVTMAILI 301
Cdd:PRK12668 218 SVFLSAFTTKTAVYALAR------------AFPGTELLIYiGAAMAvygVFFALLENDLRRLLSYHIVSQVGYMVAGIGI 285
|
170 180
....*....|....*....|....
gi 166851886 302 QTPWSFMGATTLMIAHGLTSSLLF 325
Cdd:PRK12668 286 GTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
205-340 |
2.06e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 46.81 E-value: 2.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 205 MPLygfHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT-SILEPLTKHMIYPFLMLCIWGMIMTSSICLRQTDLKSL 283
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVfDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRL 303
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 166851886 284 IAYSSVSHMA----------------MVTMAILiqtpwSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTM 340
Cdd:PRK06521 304 LAYSTIENIGiifvglglamvfiaygMPLLAAL-----ALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDM 371
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-340 |
2.07e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 47.01 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 93 YISALITLQLSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSL 172
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 173 NLPTLLLWLKELPNSWSNTLLWMaCIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRITSILEPL 251
Cdd:PRK08376 203 NMAYLAVKMSENPTVVAKIALAL-FIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGP 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 252 TKHMIYPFLMLCIWG---MIMTSSICLRQTDLKSLIAYSSVSHMAM------VTMAILIQTPWSFMGATTL------MIA 316
Cdd:PRK08376 280 AINLATVGWVIIILGcltMFVGVAMAVVQKDVKRLLAYHSVSQIGYmllglgVGLAALGDPAMASYGEIALaggiyhIVN 359
|
250 260
....*....|....*....|....
gi 166851886 317 HGLTSSLLFCLANSNYERIHSRTM 340
Cdd:PRK08376 360 HALYKALLFLTAGAVIYETGTRNL 383
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
57-330 |
3.14e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.49 E-value: 3.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 57 DPLSTPLLILTAWLLPLMIMASQFHLTKEP-LPRKKLYISALITLQLSLIMTFTVTELalfYILFETTLIPTLILITRWG 135
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTSDNYLQL---FIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 136 NQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSL------------------NLPTLLLWLKELPNSWSNTLLWMAC 197
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLdfltfnggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 198 IMafmvKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILE--PLTKHMIYPFLMLCIWgmiMTSSICL 275
Cdd:MTH00032 236 IG----KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEkaPLTLLIITIFGALTAF---FAATVGL 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 166851886 276 RQTDLKSLIAYSSVSHMAMvtMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANS 330
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGY--MVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGS 361
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-409 |
7.27e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 45.19 E-value: 7.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 111 TELALFYILFETTLIPTLILITRWGNQMERLNAGLYFLFYTLTGSLPLLVALIYTHKTLGSLNLPTLLLWLKelpnswsN 190
Cdd:PRK06589 136 SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSK-------N 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 191 TLLWMACIMAF-MVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT------SILEPLTKhMIYPFLMLC 263
Cdd:PRK06589 209 QSIILLLMFIYgIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILlyifglSYLQRIFA-EFNWLIFIP 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 264 IWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLA 343
Cdd:PRK06589 288 IVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKL 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 166851886 344 RGLQTLLPLMATWWLLASLANLALPPSINLIGELFVIMTTFSWSNFT--IILTGLNVLITALYSMYML 409
Cdd:PRK06589 368 HGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLL 435
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
102-325 |
7.36e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 44.64 E-value: 7.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 102 LSLIMTFTVTELALFYILFETTLIPTLILITRWGNQMERLNAGL-YFLFYTLTGSLPLL-VALIYTHKTLGSLNLPTLLL 179
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 180 WLKELPNSWSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAgSMVLAAVLLKLGgygmmrITSILEPLTKHMIYpF 259
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLG------IFSILVSIGLNVNI-L 155
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 166851886 260 LMLCIWGMIMTSSICLRQTDLKSLIAYSSVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTSSLLF 325
Cdd:MTH00196 156 LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
210-321 |
1.24e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.43 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 210 FHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRITSILEPLTKHMIYPFLM-LCIWGMIMTSSICLRQTDLKSLIAYS 287
Cdd:PRK05777 223 FHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVAFGGLSEDWQQVLAiIAIASMLVGNLAALSQTNIKRLLAYS 301
|
90 100 110
....*....|....*....|....*....|....
gi 166851886 288 SVSHMAMVTMAILIQTPWSFMGATTLMIAHGLTS 321
Cdd:PRK05777 302 SIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
193-298 |
2.65e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 193 LWMACIMAFMVKM---------PLygfHLWLPKAhVEAPI-------AGSMVLAAVLLklggygmmriTSILEPLTKHmi 256
Cdd:PRK07376 223 GWLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL----------VARMYPVFEQ-- 286
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 166851886 257 YPFLMLCI-WGMIMTS----SICLRQTDLKSLIAYSSVSHMAMVTMA 298
Cdd:PRK07376 287 FPAVMTVIaWTGAITAflgaSIALTQNDIKKGLAYSTISQLGYMVMA 333
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
154-388 |
7.47e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 7.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 154 GSLPLLVALIYTHKTLGSLNLPTLLLWLKELPnswSNTLLWMACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVL 233
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 234 LKLGGYGMMRITSILEPLTkhmIYPFLMLCIWGMImTSSI----CLRQTDLKSLIAYSSVSHMAMVTM-------AILIQ 302
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAP---LWWGVALLVLGMI-TAFVgglyALMEHNIQRLLAYHTLENIGIILLglgagvtGIALE 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 303 TP----WSFMGATTLMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLANLALPPSINLIGELF 378
Cdd:PRK08042 299 QPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWV 378
|
250
....*....|
gi 166851886 379 VIMTTFSWSN 388
Cdd:PRK08042 379 IYQSFFKLSN 388
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
199-325 |
9.31e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 38.23 E-value: 9.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 199 MAFMVKMPLYGFHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITSILEPLTKHMIYPFLMLCIWGMIMTSSICLR 276
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 166851886 277 QTD-LKSLIAYSSVSHMAMVTMAI--------LIQTPWSFMGATTLM--IAHGLTSSLLF 325
Cdd:PRK06459 246 VSEnVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFAHSVAKTGLF 305
|
|
| |
