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Conserved domains on  [gi|183398055|ref|YP_001837107|]
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cytochrome b (mitochondrion) [Walchia hayashii]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 13-362 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 521.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  13 KMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGASLFF 90
Cdd:MTH00156   2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTAdiELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  91 ILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVS 170
Cdd:MTH00156  82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 171 TPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWKYPYMLM 250
Cdd:MTH00156 162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 251 DPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNPSFKMKMSMFFFS 329
Cdd:MTH00156 242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFtNKSKFRGNQFYPINKILFWIFVNI 321

                        330       340       350
                 ....*....|....*....|....*....|...
gi 183398055 330 FVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00156 322 VILLTWIGARPVEEPYILTGQILTILYFLYFII 354
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 13-362 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 521.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  13 KMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGASLFF 90
Cdd:MTH00156   2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTAdiELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  91 ILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVS 170
Cdd:MTH00156  82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 171 TPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWKYPYMLM 250
Cdd:MTH00156 162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 251 DPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNPSFKMKMSMFFFS 329
Cdd:MTH00156 242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFtNKSKFRGNQFYPINKILFWIFVNI 321

                        330       340       350
                 ....*....|....*....|....*....|...
gi 183398055 330 FVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00156 322 VILLTWIGARPVEEPYILTGQILTILYFLYFII 354
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
23-362 2.95e-102

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 306.72  E-value: 2.95e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  23 PTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSPT--NAFDSVIHISRDVKMGIESRFLHSNGASLFFILIYTHIARG 100
Cdd:COG1290   31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSasEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 101 LLNMSFKKTE--VWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTLNRFF 178
Cdd:COG1290  111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 179 SLH-FLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEK----IKFSPFFIWKDAISMIVVTTIMFTMTWKYPymLMDPE 253
Cdd:COG1290  191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPP 268

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 254 NFSLANPMNTPIHIQPEWYFLFAYALLRSIP--NKLGGVIVLILSIVMLMTIP-MKKFKMKNSKFNPSFKMKMSMFFFSF 330
Cdd:COG1290  269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPfLDRSPVRSPRYRPVRTALGVAFIVFF 348

                        330       340       350
                 ....*....|....*....|....*....|..
gi 183398055 331 VSLTWLGAMPmePPYMNMSKTMGPIYFATMLI 362
Cdd:COG1290  349 IVLTILGANP--PIATLLGSINTVTYFAFFLI 378
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-205 1.97e-71

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 221.47  E-value: 1.97e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  10 PTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGAS 87
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPdvTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  88 LFFILIYTHIARGLLNMSFKKT--EVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWG 165
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKKPreLTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 183398055 166 GFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSS 205
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-203 3.49e-63

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 199.92  E-value: 3.49e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   19 LVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGASLFFILIYTH 96
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPdvTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   97 IARGLLNMSFKKT--EVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTL 174
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 183398055  175 NRFFSLHFLLPFVLMGASVVHLMALHLVG 203
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-353 2.66e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.57  E-value: 2.66e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  258 ANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPmkkFKMKNSKFNPSFK--MKMSMFFFSFVSLTW 335
Cdd:TIGR01156  66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVP---FIENVNKFQNPFRrpVATTVFLFGTVVALW 142

                          90
                  ....*....|....*...
gi 183398055  336 LGAMPMEPpyMNMSKTMG 353
Cdd:TIGR01156 143 LGIGATLP--IDKSLTLG 158
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 13-362 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 521.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  13 KMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGASLFF 90
Cdd:MTH00156   2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTAdiELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  91 ILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVS 170
Cdd:MTH00156  82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 171 TPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWKYPYMLM 250
Cdd:MTH00156 162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 251 DPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNPSFKMKMSMFFFS 329
Cdd:MTH00156 242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFtNKSKFRGNQFYPINKILFWIFVNI 321

                        330       340       350
                 ....*....|....*....|....*....|...
gi 183398055 330 FVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00156 322 VILLTWIGARPVEEPYILTGQILTILYFLYFII 354
CYTB MTH00145
cytochrome b; Provisional
 1-362 8.72e-157

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 445.12  E-value: 8.72e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   1 MKNQMSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIES 78
Cdd:MTH00145   1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAhvDLAFSSVIHIMRDVNYGWLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  79 RFLHSNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEP 158
Cdd:MTH00145  81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 159 LVQWLWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIM 238
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 239 FTMTWKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPMKKF-KMKNSKFNP 317
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVgKFRSLSFYP 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 183398055 318 SFKMKMSMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLI 365
CYTB MTH00191
cytochrome b; Provisional
 5-362 5.78e-151

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 429.72  E-value: 5.78e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   5 MSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLH 82
Cdd:MTH00191   1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTAdiSLAFSSVVHICRDVNYGWLLRNIH 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  83 SNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQW 162
Cdd:MTH00191  81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 163 LWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMT 242
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 243 WKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNPSFKM 321
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLlHTSKQRSNTFRPLTQV 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 183398055 322 KMSMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
CYTB MTH00119
cytochrome b; Provisional
 1-362 9.13e-150

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 427.40  E-value: 9.13e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   1 MKNQMSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIES 78
Cdd:MTH00119   1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTAdiSLAFSSVAHICRDVQYGWLI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  79 RFLHSNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEP 158
Cdd:MTH00119  81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 159 LVQWLWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIM 238
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 239 FTMTWKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNP 317
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFlHTSKQRSMTFRP 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 183398055 318 SFKMKMSMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
CYTB MTH00016
cytochrome b; Validated
 1-362 2.08e-143

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 410.99  E-value: 2.08e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   1 MKNQMSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIES 78
Cdd:MTH00016   1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPhiDLAFSSVAHISRDVNYGWLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  79 RFLHSNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEP 158
Cdd:MTH00016  81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 159 LVQWLWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIM 238
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 239 FTMTWKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIP-MKKFKMKNSKFNP 317
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPfIFKQKFRGLSFYP 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 183398055 318 SFKMKMSMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMI 365
CYTB MTH00131
cytochrome b; Provisional
 7-362 1.55e-140

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 404.03  E-value: 1.55e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   7 KLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSN 84
Cdd:MTH00131   6 KTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSdiSTAFSSVAHICRDVNYGWLIRNLHAN 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  85 GASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLW 164
Cdd:MTH00131  86 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIW 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 165 GGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWK 244
Cdd:MTH00131 166 GGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALF 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 245 YPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNPSFKMKM 323
Cdd:MTH00131 246 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPIlHTSKQRGLTFRPLTQFLF 325

                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 183398055 324 SMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00131 326 WTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
CYTB MTH00074
cytochrome b; Provisional
 1-362 9.60e-138

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 396.74  E-value: 9.60e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   1 MKNQMSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIES 78
Cdd:MTH00074   1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTAdtSSAFSSVAHICRDVNYGWLM 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  79 RFLHSNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEP 158
Cdd:MTH00074  81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 159 LVQWLWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIM 238
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 239 FTMTWKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNP 317
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMlHTSKQRSLMFRP 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 183398055 318 SFKmkmsMFFFSFVS----LTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00074 321 LTQ----ILFWLLVAntliLTWIGGQPVEDPFIEIGQAASILYFLLFII 365
CYTB MTH00100
cytochrome b; Provisional
 5-362 3.86e-136

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 392.85  E-value: 3.86e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   5 MSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLH 82
Cdd:MTH00100   4 IRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSdtTTAFSSVAHICRDVNYGWIIRYLH 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  83 SNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQW 162
Cdd:MTH00100  84 ANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 163 LWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMT 242
Cdd:MTH00100 164 IWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLV 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 243 WKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPM-KKFKMKNSKFNPSFKM 321
Cdd:MTH00100 244 LFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLlHTSKQRSMMFRPLSQC 323

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 183398055 322 KMSMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00100 324 LFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
CYTB MTH00053
cytochrome b; Provisional
 1-362 8.99e-132

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 381.75  E-value: 8.99e-132
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   1 MKNQMSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIES 78
Cdd:MTH00053   1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCAdvNLAFSSVAHITRDVNYGFIL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  79 RFLHSNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEP 158
Cdd:MTH00053  81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 159 LVQWLWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIM 238
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 239 FTMTWKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIP-MKKFKMKNSKFNP 317
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPyLHKSRFRGLSFRP 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 183398055 318 SFKMKMSMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
CYTB MTH00022
cytochrome b; Validated
 4-362 3.88e-131

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 379.82  E-value: 3.88e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   4 QMSKLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFL 81
Cdd:MTH00022   2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSdvSLAFASVGHIMRDVNYGFLLRYL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  82 HSNGASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQ 161
Cdd:MTH00022  82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 162 WLWGGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTM 241
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 242 TWKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIP-MKKFKMKNSKFNPSFK 320
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPlLHTSWLRGLTFRPLGR 321

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 183398055 321 MKMSMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
CYTB MTH00034
cytochrome b; Validated
 7-362 3.46e-130

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 377.51  E-value: 3.46e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   7 KLSPTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSN 84
Cdd:MTH00034   6 KSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTAdiSLAFSSVSHICRDVNYGWLLRNIHAN 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  85 GASLFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLW 164
Cdd:MTH00034  86 GASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIW 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 165 GGFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWK 244
Cdd:MTH00034 166 GGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 245 YPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPMKKFKMKNSK-FNPSFKMKM 323
Cdd:MTH00034 246 FPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSStFRPLSQIAF 325

                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 183398055 324 SMFFFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00034 326 WLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
CYTB MTH00224
cytochrome b; Provisional
 10-362 6.58e-122

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 356.54  E-value: 6.58e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  10 PTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSPT--NAFDSVIHISRDVKMGIESRFLHSNGAS 87
Cdd:MTH00224  10 PAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNieMAFSSVAHISRDVNYGWLLRSIHANGAS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  88 LFFILIYTHIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGF 167
Cdd:MTH00224  90 MFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGF 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 168 SVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWKYPY 247
Cdd:MTH00224 170 AVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPN 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 248 MLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPMKKFKMKNS-KFNPSFKMKMSMF 326
Cdd:MTH00224 250 LFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSlPFYPLNQLLFWLL 329

                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 183398055 327 FFSFVSLTWLGAMPMEPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00224 330 VTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
CYTB MTH00086
cytochrome b; Provisional
 19-357 3.88e-111

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 328.05  E-value: 3.88e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  19 LVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGASLFFILIYTH 96
Cdd:MTH00086   7 VVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTAdsSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLH 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  97 IARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTLNR 176
Cdd:MTH00086  87 IFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKF 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 177 FFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVtTIMFTMTWKYPYMLMDPENFS 256
Cdd:MTH00086 167 FFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFW-LVFIIFSLFYPFNLGDPEMFI 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 257 LANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPMkkFKMKNSKFNPSFKMKMSMFFFSFVSLTWL 336
Cdd:MTH00086 246 EADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIF--VNNYTSCLNKLNKFLVFSFIVVNVILSWL 323

                        330       340
                 ....*....|....*....|.
gi 183398055 337 GAMPMEPPYMNMSKTMGPIYF 357
Cdd:MTH00086 324 GQCLVEYPFLFLSQIFSFIYF 344
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
23-362 2.95e-102

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 306.72  E-value: 2.95e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  23 PTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSPT--NAFDSVIHISRDVKMGIESRFLHSNGASLFFILIYTHIARG 100
Cdd:COG1290   31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSasEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 101 LLNMSFKKTE--VWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTLNRFF 178
Cdd:COG1290  111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 179 SLH-FLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEK----IKFSPFFIWKDAISMIVVTTIMFTMTWKYPymLMDPE 253
Cdd:COG1290  191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPP 268

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 254 NFSLANPMNTPIHIQPEWYFLFAYALLRSIP--NKLGGVIVLILSIVMLMTIP-MKKFKMKNSKFNPSFKMKMSMFFFSF 330
Cdd:COG1290  269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPfLDRSPVRSPRYRPVRTALGVAFIVFF 348

                        330       340       350
                 ....*....|....*....|....*....|..
gi 183398055 331 VSLTWLGAMPmePPYMNMSKTMGPIYFATMLI 362
Cdd:COG1290  349 IVLTILGANP--PIATLLGSINTVTYFAFFLI 378
CYTB MTH00033
cytochrome b; Provisional
 17-362 2.55e-99

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 299.16  E-value: 2.55e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  17 NSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGASLFFILIY 94
Cdd:MTH00033  13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSdvSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  95 THIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTL 174
Cdd:MTH00033  93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 175 NRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVV--TTIMFTMTWKYPYMLMDP 252
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILfgVFVIIGIEPRIETLLQDP 252

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 253 ENFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIP-MKKFKMKNSKFNPSFKMKMSMFFFSFV 331
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPiLDRSKIRSLTFNPTGKFFFWFIVGDFI 332

                        330       340       350
                 ....*....|....*....|....*....|..
gi 183398055 332 SLTWLGAMPM-EPPYMNMSKTMGPIYFATMLI 362
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
CYTB MTH00046
cytochrome b; Validated
 17-350 2.83e-77

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 241.81  E-value: 2.83e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  17 NSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSPTN--AFDSVIHISRDVKMGIESRFLHSNGASLFFILIY 94
Cdd:MTH00046   7 RNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSlcSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  95 THIARGLLNMSFKKTEVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTL 174
Cdd:MTH00046  87 IHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 175 NRFFSLHFLLPFVLMGASVVHLMALHLVGSSNPM-GTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWKYPYMLMDPE 253
Cdd:MTH00046 167 VRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLfSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIE 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 254 NFSLANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGvIVLILSIVMLMTIPMKKFkmkNSKFNPSFKMKMSMFFFSFVSL 333
Cdd:MTH00046 247 AYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNG---SSVYSVWRQVNFWLIVSLFFSL 322

                        330
                 ....*....|....*..
gi 183398055 334 TWLGAMPMEPPYMNMSK 350
Cdd:MTH00046 323 SYLGGCHPEYPYLLISQ 339
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-205 1.97e-71

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 221.47  E-value: 1.97e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  10 PTTKMASNSLVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGAS 87
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPdvTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  88 LFFILIYTHIARGLLNMSFKKT--EVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWG 165
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKKPreLTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 183398055 166 GFSVSTPTLNRFFSLHFLLPFVLMGASVVHLMALHLVGSS 205
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-203 3.49e-63

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 199.92  E-value: 3.49e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   19 LVMLPTPTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSP--TNAFDSVIHISRDVKMGIESRFLHSNGASLFFILIYTH 96
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPdvTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   97 IARGLLNMSFKKT--EVWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTL 174
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 183398055  175 NRFFSLHFLLPFVLMGASVVHLMALHLVG 203
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 206-349 1.32e-33

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 121.60  E-value: 1.32e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 206 NPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTWKYPYMLMDPENFSLANPMNTPIHIQPEWYFLFAYALLRSIPN 285
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 183398055 286 KLGGVIVLILSIVMLMTIPMKKFKMKNSKFNPSFKMKMSMFFFSFVSLTWLGAMPMEPPYMNMS 349
Cdd:cd00290   81 KLLGVLAMAASILSLFLVPFLENSNKRSQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLIL 144
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
87-252 7.85e-32

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 117.73  E-value: 7.85e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055   87 SLFFILIYTHIARGLLNMSFKKTE--VWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLW 164
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  165 GGFSVSTPTLNRFFSLHF-LLPFVLMGASVVHLMALHLVGSSNPMGTNSNQEKIKFSPFFIWKDAISMIVVTTIMFTMTW 243
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 183398055  244 KYPYMLMDP 252
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 41-208 2.32e-30

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 115.58  E-value: 2.32e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  41 IMIFQIITGIFLSMHYSPT--NAFDSVIHISRDVKMGIESRFLHSNGASLFFILIYTHIARGLLNMSFKKTE--VWMSGN 116
Cdd:PRK03735  51 CFVIQILSGMFLTMYYVPDikNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGV 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 117 IMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTLNRFFSLH-FLLPFVLMGASVVH 195
Cdd:PRK03735 131 LIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAH 210

                        170
                 ....*....|...
gi 183398055 196 LMALHLVGSSNPM 208
Cdd:PRK03735 211 FLMIRKQGISGPL 223
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
258-349 5.10e-27

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 102.56  E-value: 5.10e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  258 ANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIP-MKKFKMKNSKFNPSFKMKMSMFFFSFVSLTWL 336
Cdd:pfam00032   2 ANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPwLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGWL 81

                          90
                  ....*....|...
gi 183398055  337 GAMPMEPPYMNMS 349
Cdd:pfam00032  82 GKQPPTGPYTLLG 94
petB CHL00070
cytochrome b6
 25-208 6.29e-25

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 100.57  E-value: 6.29e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  25 PTTINYAWNMGSMLGMIMIFQIITGIFLSMHYSPT--NAFDSVIHISRDVKMGIESRFLHSNGASLFFILIYTHIARGLL 102
Cdd:CHL00070  27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTvtEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 103 NMSFKKTE--VWMSGNIMILILMGTAFLGYVLPWGQMSFWGATVITNLASAIPILGEPLVQWLWGGFSVSTPTLNRFFSL 180
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                        170       180
                 ....*....|....*....|....*....
gi 183398055 181 H-FLLPFVLMGASVVHLMALHLVGSSNPM 208
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 246-343 7.88e-12

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 62.89  E-value: 7.88e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 246 PYMLMDPenfslANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPmkkFKMKNSKFNPSFKMKMSM 325
Cdd:COG5679   60 PAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVP---FIENVNKFQNPFRRPVAT 131

                         90       100
                 ....*....|....*....|
gi 183398055 326 FFFSFVSLT--WLGAMPMEP 343
Cdd:COG5679  132 AVFLFGTLVtlWLGIGAALP 151
petD CHL00058
cytochrome b6/f complex subunit IV
 246-342 1.77e-11

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 61.94  E-value: 1.77e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055 246 PYMLMDPenfslANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPmkkFKMKNSKFNPSFK--MKM 323
Cdd:CHL00058  59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVP---FLENVNKFQNPFRrpVAT 130

                         90       100
                 ....*....|....*....|..
gi 183398055 324 SMFFFSFVSLTWLG---AMPME 342
Cdd:CHL00058 131 TVFLIGTAVALWLGigaTLPID 152
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-353 2.66e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.57  E-value: 2.66e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 183398055  258 ANPMNTPIHIQPEWYFLFAYALLRSIPNKLGGVIVLILSIVMLMTIPmkkFKMKNSKFNPSFK--MKMSMFFFSFVSLTW 335
Cdd:TIGR01156  66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVP---FIENVNKFQNPFRrpVATTVFLFGTVVALW 142

                          90
                  ....*....|....*...
gi 183398055  336 LGAMPMEPpyMNMSKTMG 353
Cdd:TIGR01156 143 LGIGATLP--IDKSLTLG 158
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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