|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.14e-159 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 450.45 E-value: 1.14e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 1 MNPITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQ 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAIT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 241 LAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMISHHTNL 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*
gi 226464090 321 KYNLILPTLTVLSTLTLPLSPQLTT 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSI 345
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-313 |
1.08e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 359.12 E-value: 1.08e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 1 MNPITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQ 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIyQLLNPTITTILAIT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQI-APTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMI 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 226464090 241 LAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKM 313
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTT 312
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
3.61e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 332.17 E-value: 3.61e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 1 MNPITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQ 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMI 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 241 LAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMISHHTNL 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
....*
gi 226464090 321 KYNLI 325
Cdd:MTH00112 321 KNTLT 325
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
6.96e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 329.19 E-value: 6.96e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 1 MNPITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQ 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAIT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMI 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 241 LAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMISHHTNL 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*
gi 226464090 321 KYNLI 325
Cdd:MTH00070 321 TNNLL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.87e-89 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 271.84 E-value: 1.87e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 1 MNPITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQ 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAIT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMI 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 241 LAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSkMISHHTNL 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINM-MSSWRTKS 319
|
330 340
....*....|....*....|...
gi 226464090 321 KYNLILPTLTVLSTLTLPLSPQL 343
Cdd:MTH00200 320 NSNLLVGLLLLLSILGLPLTPQL 342
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-308 |
1.46e-85 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 262.17 E-value: 1.46e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 1 MNPITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQ 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAIT 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMI 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 226464090 241 LAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTN 308
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQH 308
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
9.72e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 187.34 E-value: 9.72e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 1 MNPITLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYkq 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 sgmwMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIyqlLNPTITTILAIT 160
Cdd:MTH00160 80 ----LNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMI 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 241 LAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMISHHTNL 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFS 312
|
....*
gi 226464090 321 KYNLI 325
Cdd:MTH00160 313 LILNF 317
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
11-313 |
2.16e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 178.54 E-value: 2.16e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 11 FTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMWmfqqqt 90
Cdd:MTH00144 11 FLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW------ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 91 nnMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNP-TITTILAITSVFIGAWGG 169
Cdd:MTH00144 85 --FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 170 LNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMILAMTStILL 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIIS-LLL 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 226464090 250 SMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKM 313
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSS 305
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
5-299 |
8.97e-48 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 164.18 E-value: 8.97e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 5 TLIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILnykqsgMW 84
Cdd:MTH00011 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 85 MFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAITSVFI 164
Cdd:MTH00011 81 SFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 165 GAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMILAMT 244
Cdd:MTH00011 161 GGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSL 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 226464090 245 STILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYS 299
Cdd:MTH00011 241 FIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-325 |
9.08e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 153.29 E-value: 9.08e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 8 IIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYkqsgmwmFQ 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------SN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 88 QQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQllNPTITTILAITSVFIGAW 167
Cdd:MTH00197 75 LYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 168 GGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMAWNKTPMILAMTSTI 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 226464090 248 LLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYS-MSLTMFPTNNNSKMISHHTNLKYNLI 325
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKsLILSNWMINFLMKINLLYSGLFILLM 311
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
22-300 |
4.16e-36 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 136.01 E-value: 4.16e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 22 SSSNLLLMWVGLE---VSLLAIVPLltNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGM--------WMFQQQT 90
Cdd:COG1007 120 SANDLLTLFLGLEllsLSLYVLVAF--RRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSlnlagiaaALAAGGA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 91 NNMLLN----MTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTIT-------TILAI 159
Cdd:COG1007 198 NSPLLLlglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAadwqlllAVLAV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 160 TSVFIGAWGGLNQTQTRKIMAYSSIAHMGWM-VAILPYNPN---LTLLNLVIYILLTIPMFISLMMNS-----ATTINSF 230
Cdd:COG1007 278 LSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSrkggeAEEIEDL 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 231 SMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSM 300
Cdd:COG1007 358 AGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAM 427
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-300 |
5.89e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 127.24 E-value: 5.89e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 10 YFTIFM----GPVITMSSSNLLLMWVGLEV---SLLAIVPLltNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSG 82
Cdd:PRK05777 105 FYLLVLfallGMMVMVSANDLLTLFLGLELlslPLYALAAL--RRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 83 MWMF--------QQQTNNMLL----NMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLN 150
Cdd:PRK05777 183 SLSFagiakalaDGSGNSLLLlfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 151 PTITT-------ILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWM-VAILPYNPN---LTLLNLVIYILLTIPMFISL 219
Cdd:PRK05777 263 GGLSEdwqqvlaIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVI 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 220 MMNS-----ATTINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYT 294
Cdd:PRK05777 343 SLLRrkggeAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYL 422
|
....*.
gi 226464090 295 RLIYSM 300
Cdd:PRK05777 423 RVIKLM 428
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-300 |
4.65e-31 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 121.98 E-value: 4.65e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 6 LIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLT-NKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMW 84
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 85 MF----QQQTNNMLLN--------MTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLL--- 149
Cdd:TIGR01770 184 NFedllLFLSNGMLNIsllllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 150 ----NPTITTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGW-MVAILPYNPNL---TLLNLVIYILLTIPMFISLMM 221
Cdd:TIGR01770 264 fseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGikaVLFYIFIYALMSLGAFGVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 222 ------NSATTINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTR 295
Cdd:TIGR01770 344 lrsykdEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
....*
gi 226464090 296 LIYSM 300
Cdd:TIGR01770 424 VVKVM 428
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
7-298 |
4.26e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 119.35 E-value: 4.26e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 7 IIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKK-SPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMWM 85
Cdd:MTH00199 100 PILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRdSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETS 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 86 FQQQTNNMLLN----MTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNptITTILAITS 161
Cdd:MTH00199 180 IQGINSILTGDvgkiLITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLS 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 162 VFIGAWGGLNQTQTRKIMAYSSIAHMG---WMVAILPYNP-NLTLLNLVIYILLTIPMF-ISLMMNSATT-INSFSMAWN 235
Cdd:MTH00199 258 IIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESiQASLIYMIIYVIMSICSFsIILSLKLTKGlIVEVSGLSR 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 226464090 236 KTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIY 298
Cdd:MTH00199 338 KNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQ 400
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-267 |
5.84e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.18 E-value: 5.84e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 23 SSNLLLMWVGLEVSLLAIVPLLT-NKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSG-----------MWMFQQQT 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 91 NNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILL-TWQKIAPLSIL--YQIYQLLNPTITT---ILAITSVFI 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIrrSLLYLPSSPFIQQillILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 165 GAWGGLNQTQTRKIMAYSSIAHMGWMVAIL----PYNPNLTLLNLVIYILLTIPMF-----ISLMMNSATTINSFSMAWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|..
gi 226464090 236 KTPMILAMTSTILLSMGGLPPLTGFLPKWTII 267
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLIL 272
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-297 |
8.58e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 114.36 E-value: 8.58e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 13 IFMGPVITMSSSNLLLMWVGLEVSLLAIVPLL-TNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMWMFQqqTN 91
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS--YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 92 NMLLNMTL---------------ISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYqlLNPTITTI 156
Cdd:MTH00196 80 NLVLNSGQsfssvsvpigylliiVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIG--LNVNILLI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 157 LAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNP----NLTLLNLVIYILLTIPMFISLMMNSATT--INSF 230
Cdd:MTH00196 158 GGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEF 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 226464090 231 SMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLI 297
Cdd:MTH00196 238 SGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIV 304
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
23-301 |
1.68e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 97.53 E-value: 1.68e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 23 SSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMWMFQ------QQTNNMLLN 96
Cdd:COG0651 126 TGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAdlaarlAELDPGLLL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 97 ----MTLISLAMKLGLAPFHYWLPEVTQGIPMH-TGLI--LLTwqKIAPLSILYQIYQLLNPTITT-------ILAITSV 162
Cdd:COG0651 206 aafaLLLVGFGIKAALFPLHFWLPDAYPAAPSPvSALLsgLLT--KVGVYAILRVLTLLFGADPALflgtlllVLGLLTM 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 163 FIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSA--------TTINSFSMAW 234
Cdd:COG0651 284 LVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGaieratgtRDLDKLGGLG 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 226464090 235 NKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMS 301
Cdd:COG0651 364 KRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-263 |
4.05e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 85.06 E-value: 4.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 7 IIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLL-TNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMWM 85
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSgYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 86 FQQQTNNMLLNM--------------TLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNP 151
Cdd:CHL00049 194 ELQEIVNGLINTqmynspgisialifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 152 TITT-------ILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGW-MVAILPYNPNLTLLNLVIYilltipMFISLMMNS 223
Cdd:CHL00049 274 FSSNewhllleILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSNDGYASMITY------MLFYIFMNL 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 226464090 224 AT--------------TINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPK 263
Cdd:CHL00049 348 GTfacivlfglrtgtdNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
7-263 |
7.45e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 78.17 E-value: 7.45e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 7 IIIYFTIFMGPVITMSSSNLLLMWVGLEvsLLAIVP-LLTN--KKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSG- 82
Cdd:PRK02504 113 AAILLTATLGGMFLSGATELVMIFISLE--TLSIASyLLTGymKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGg 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 83 --------MWMFQQQTNNMLLNMTLI--SLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPT 152
Cdd:PRK02504 191 stqlsaiaLALITSPSLGLALALVFViaGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 153 IT-------TILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPM----FISLMM 221
Cdd:PRK02504 271 FDeqwkllfTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFMnlgaFACVIL 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 226464090 222 NSATT----INSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPK 263
Cdd:PRK02504 351 FSLRTgtdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-298 |
9.41e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 74.92 E-value: 9.41e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 23 SSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGmwmfqqqTNNMLLN------ 96
Cdd:PRK08375 125 TADLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTG-------TLNMADLagalae 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 97 ---------MTLISLAMKLGLAPFHYWLPEVTQGIP---------MHT-----GLILLTWQKIAPLSILYQIYQllnpTI 153
Cdd:PRK08375 198 nptvvtafgFVLLALALKAAVFPLHTWLPRAYPAAPpvvtallsgLVTkvavyALIRIYFTVFGGDFRFALGLG----WL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 154 TTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSA--------T 225
Cdd:PRK08375 274 LAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGaievtygtR 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 226464090 226 TINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIY 298
Cdd:PRK08375 354 RLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-297 |
3.72e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 70.27 E-value: 3.72e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 15 MGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRST---------EAATKYFLTQATASMIMLLAIILNYKQSG--- 82
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 83 -----MWMFQQQTNNMLLNMTL------ISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKiaplsilYQIYQLLNP 151
Cdd:MTH00198 279 mlgtiLSATLETTNIELRQGSLgylfitVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPK-------FTVYILLTS 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 152 TITTI-----LAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLN----LVIYILLTIPMFISLMM- 221
Cdd:MTH00198 352 LVITSklllsVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAswtyAVTYLVSALASFTVICTl 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 222 --------------------NSATTINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTL 281
Cdd:MTH00198 432 eefgtrtptsrqrdgsfgnyNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSI 511
|
330 340
....*....|....*....|...
gi 226464090 282 MAMMALLNL-------FFYTRLI 297
Cdd:MTH00198 512 YYLVALFAIictcisaFYYIRIV 534
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
23-192 |
5.93e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.26 E-value: 5.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 23 SSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMW---MFQQQTNNMLLNMT- 98
Cdd:COG1008 130 ALDLFLFYVFWELMLIPMYFLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdIAELAAAPLPLTAQl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 99 ------LISLAMKLGLAPFHYWLPEV-----TQGIPMHTGLILltwqKIA-------PLSILYQIYQLLNPTITtILAIT 160
Cdd:COG1008 210 llflafFIAFAVKVPMFPFHTWLPDAhveapTAGSVLLAGVLL----KMGgygllrfALPLFPEASAYFAPLLA-ALGVI 284
|
170 180 190
....*....|....*....|....*....|..
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVA 192
Cdd:COG1008 285 GIIYGALVALAQTDLKRLIAYSSVSHMGFVLL 316
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-260 |
9.76e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 65.73 E-value: 9.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 6 LIIIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGM-- 83
Cdd:TIGR01972 108 FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtf 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 84 ----WMFQQQTNN---MLLNMTLISLAMKLGLAPFHYWLPEV-----TQGIPMHTGLILltwqKIAPLSILYQIYQLLN- 150
Cdd:TIGR01972 188 dlleLLNLPLPFGvqtWLFLAFFIAFAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTYGFLRFNLPLFPd 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 151 -----PTITTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGW-MVAILPYNPnLTLLNLVIYI----LLTIPMFISLM 220
Cdd:TIGR01972 264 aslyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFSFNE-LGISGAVFQMishgLITAALFLLVG 342
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 226464090 221 M----NSATTINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGF 260
Cdd:TIGR01972 343 VlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-300 |
3.76e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.96 E-value: 3.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 5 TLIIIYFTIFMGPVITmssSNLLLMWVGLEVSLLAIVPLLT-NKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGM 83
Cdd:PRK08376 125 TLILLLELGMLGMAIT---GDLFNFFVFLEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGT 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 84 WMFQQQTNNMLLNMTLI----------SLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTwQKIAPLSILYQI-YQLLNPT 152
Cdd:PRK08376 202 LNMAYLAVKMSENPTVVakialalfiaGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLV-IKQAGLYALARVlFSIYGPA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 153 ITT--------ILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWM-----VAILPYNPNL------TLLNLVIYILLTI 213
Cdd:PRK08376 281 INLatvgwviiILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPAmasygeIALAGGIYHIVNH 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 214 PMFISLMMNSATTINSFSMAWNKTPMI-LAMT---STILLSMG-----GLPPLTGFLPKWTII-SELLKNdcSILSTLMA 283
Cdd:PRK08376 361 ALYKALLFLTAGAVIYETGTRNLNELGgLARTmpkTTIAFLIGaaaivGLPPFNGFASKWLIYeSSALFN--PILGVIAM 438
|
330
....*....|....*..
gi 226464090 284 MMALLNLFFYTRLIYSM 300
Cdd:PRK08376 439 IGSVLTLASFVKVFHTA 455
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-300 |
2.66e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 61.53 E-value: 2.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 29 MWVGLEVSLLAIVPLLT-NKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSG-----------MWMFQQQTNNMLLN 96
Cdd:PRK12667 138 LFVMLEVLSISAYGLVAyYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGtlnmadlsakiRGLSFPLTGGLAGN 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 97 MTLISLA----------MKLGLAPFHYWLPEVTQGIP-----MHTGLILLTwQKIAPLSILYQIY---QLLNPTITT--- 155
Cdd:PRK12667 218 PPLALGValalalwaftIKAAIFPNHFWLPDAHPAAPspvsaMLSGLVVNV-GAYAIIRFLYTIFgisPSLIDFRAAlsp 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 156 ---ILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYIL----------LTIPMFIslmmN 222
Cdd:PRK12667 297 iliILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVFI----H 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 223 SATTINSFSMA--WNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSM 300
Cdd:PRK12667 373 AAGTRDIDELAglGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSL 452
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
10-298 |
2.42e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 58.63 E-value: 2.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 10 YFTIFMGpviTMS----SSNLLLMWVGLE-VSLLAIvpLL----TNKKSPRSteAATKYFLTQATASMIMLLAIILNYKQ 80
Cdd:COG1009 116 YLLLFMA---AMLglvlSDNLLLLFVFWElVGLCSY--LLigfwYEKPSARR--AARKAFLVTRVGDLGLLLGILLLGAI 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMF-------QQQTNNMLLNMTLISLAM----KLGLAPFHYWLPE-----------------VTQGIPMhtglillt 132
Cdd:COG1009 189 AGTLNFsellaaaPTILSSPLLTLILLLLLLgafgKSAQFPLHFWLPDamegptpvsallhaatmVKAGVYL-------- 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 133 wqkIAPLSILYQIYQLLNPTITTILAITSVFiGAWGGLNQTQTRKIMAYSSIAHMGWMVAILpynpNLTLLNLVIYILLT 212
Cdd:COG1009 261 ---LARLSPLFALSPVWLTVVAIIGAITALF-AALIALAQTDIKRVLAYSTVSQLGYMFLAL----GVGAYVAALFHLLT 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 213 IPMFISLM-------MNSATTINSFSMA--WNKTPmILAMTSTI-LLSMGGLPPLTGFLPKWTIISELLKNDCS--ILST 280
Cdd:COG1009 333 HAFFKALLflgagsvIHATGTRDIRKMGglRKKMP-ITAITFLIgALSLAGIPPFAGFFSKEAILEAALEAGGLgpLLLA 411
|
330
....*....|....*...
gi 226464090 281 LMAMMALLNLFFYTRLIY 298
Cdd:COG1009 412 VALLGAFLTAFYSFRLFF 429
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
24-293 |
3.83e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 57.65 E-value: 3.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 24 SNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSG---MWMFQQQTNNMLLNMTLI 100
Cdd:PRK12663 128 GDLFNLYVWFEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGtlnMAHIAMRLNDMGDTATLT 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 101 SLA--------MKLGLAPFHyWLPEVTQGIPMHTGLI---LLTWQKIAPL-----SILYQIYQLLNPTITTILAITSVfI 164
Cdd:PRK12663 208 TIAllfllafgMKAALFPFM-WLPAAYHTPNTEVAALfaaLLTKVGIYALirvftLLFPQERELLHPLLATMAAITMV-I 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 165 GAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNpNLTLLNLVIYILLTIPMFISLM---------MNSATTINSFSMAWN 235
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFYLVHDMVVKTALfliagslvrLTGYRSLQYLGGLYR 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 226464090 236 KTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKND------CSILSTLMAMMALLNLFFY 293
Cdd:PRK12663 365 KEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGayillaLMLITSLITMYSLFRIFFL 428
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-191 |
6.41e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.86 E-value: 6.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 20 TMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNY-------KQSGMWMFQQQTNN 92
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYanaatvmGDGEMAILWTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 93 M--LLNMTLISLAM---------KLGLAPFHYWLPEVTQGIP-----MHTGLILltwqKIApLSILYQIYQLLNPTITT- 155
Cdd:PRK06458 204 HasLLDPTLMKLAFvflligfgtKVGLFPMHAWLPDAHSEAPspvsaLLSGVLL----NVA-LYAVLRYYILIDAAIGSd 278
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 226464090 156 -------ILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMV 191
Cdd:PRK06458 279 fpgrlllIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIA 321
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
22-191 |
9.91e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 53.28 E-value: 9.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 22 SSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAII----LNYKQSGMWMFQQ-QTNNMLLN 96
Cdd:PRK05846 129 AALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADlLNLPLPPG 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 97 MT-------LISLAMKLGLAPFHYWLPEV-----TQGIPMHTGLILltwqKIAP---LSILYQIY----QLLNPTITTiL 157
Cdd:PRK05846 209 VQywlflafFIAFAVKMPMFPLHTWLPDAhvqapTAGSVLLAGILL----KMGAyglLRFSLPLFpdasHEFAPIIIT-L 283
|
170 180 190
....*....|....*....|....*....|....
gi 226464090 158 AITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMV 191
Cdd:PRK05846 284 GVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT 317
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
11-312 |
2.11e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.39 E-value: 2.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 11 FTIFMgpVITMSSSNLLLMWVGLE----VSLLAIVPLLTNKKSPRsteAATKYFLTQATASMIMLLAIILNYKQSGMWMF 86
Cdd:MTH00020 120 FTFLM--VVLVTSDNYLQLFIGWEgvglCSYLLINFWLTRIEANK---AAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 87 QQQTNNMLL----NMTLISLAMKLGLAP------FHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLN--PTIT 154
Cdd:MTH00020 195 SSVFNMVVSapssDITLICLFLFIGAVGksaqlgLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEqaPLAL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 155 ---TILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILpynpNLTLLNLVIYILLTIPMFISLMMNSATTI---- 227
Cdd:MTH00020 275 iivTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFKALLFLSAGSVihal 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 228 ------NSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMM-ALLNLFFYTRLIYsm 300
Cdd:MTH00020 351 sdeqdmRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFsALLTAFYSIRLIY-- 428
|
330
....*....|..
gi 226464090 301 sLTmFPTNNNSK 312
Cdd:MTH00020 429 -LT-FLSNTNLK 438
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-299 |
1.83e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.43 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 2 NPITLIIIYFTIFMGPVITMSSsNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYF-LTQATASMIMLLAIILNYKQ 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSS-DLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLkILMISALLLFLPAVILIYTK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 81 SGMWMFQ-----QQTNNMLLNMTLISLAMKLGLAPFHYWLPE-----------------VTQGIPMHTGLILLTWQkiap 138
Cdd:PRK06589 194 TGNLDFVsgglfSKNQSIILLLMFIYGIAKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIFG---- 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 139 LSILYQIYQLLNPTIttILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVA----ILPYNPNLTLLNLVIYILLTIP 214
Cdd:PRK06589 270 LSYLQRIFAEFNWLI--FIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLsafiLTPKALGAAILHLVSHSFAKIC 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 215 MFISL----MMNSATTINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMM----A 286
Cdd:PRK06589 348 LFYSMgsiySLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviasS 427
|
330
....*....|...
gi 226464090 287 LLNLFFYTRLIYS 299
Cdd:PRK06589 428 ILSALYLLKILSS 440
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
23-190 |
2.55e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 48.93 E-value: 2.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 23 SSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATaSMIMLLAIIL-----------NYKQSGMWMFQQQTN 91
Cdd:PRK06473 126 AQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAI-SGILILVSFLglvwlsgassfDYEPLRSHTLPLSTQ 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 92 NMLLNMTLISLAMKLGLAPFHYWLPE--VTQGIPMHTGL--ILLTWQKIAPL----SILYQIYQLLNPTITTiLAITSVF 163
Cdd:PRK06473 205 LLLLAPILVGFGIKIPLVPFHTWLPDahVEASTPVSVLLagVLLKLGTYGLLrfgvGLFPEAWVYLAPWLAT-WAVVSVL 283
|
170 180
....*....|....*....|....*..
gi 226464090 164 IGAWGGLNQTQTRKIMAYSSIAHMGWM 190
Cdd:PRK06473 284 YGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
26-282 |
2.78e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 48.84 E-value: 2.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 26 LLLMWVGLEVSLLAIVPLLTNKksprSTEAATKYFLTQATASMIMLLAIILNYKQSGMWMFQQQTNNML--------LNM 97
Cdd:PRK08668 123 LYIFWEIMTFSSFMMVPMGKKE----SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLIndtstgfaLIV 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 98 TLISLAM---KLGLAPFHYWLPEVTQGIP-------------MHTGLILLTWQKIAPLSILYQIYQLLN-PTITTILAI- 159
Cdd:PRK08668 199 FLFLLAFgvaKAGIFPLHVWAPDAYSEAPqsfsavlsgqlskLGAYGFLLVLYVLPGTKLFSEFGTYRGvPLFNYILAWl 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 160 --TSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNlVIYILLTIPMFISLMMNSA---------TTIN 228
Cdd:PRK08668 279 gnISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAG-GLFHVFNHALFKGLFFLIFaaviyrtgtTKIS 357
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 226464090 229 SFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLM 282
Cdd:PRK08668 358 EMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
9-300 |
3.85e-06 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 48.69 E-value: 3.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 9 IYFTIFMGPVI-TMSSSNLLLMWVGLEVSLLAIVPLLTN-KKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMWMF 86
Cdd:TIGR00940 110 AYLLAFMGAMLgVVLSDNLILLYVFWELTSIVSFLLISYwHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 87 QQ--QTNNMLLNMTLISLAMKLGLA---------PFHYWLPEVTQG-IPMHTGLILLTWQKiAPLSILYQIYQLLNPT-- 152
Cdd:TIGR00940 190 DAviASADAIRNSPLFGTAMVLVLLgaftksaqfPFHIWLPDAMEApTPVSAYLHSATMVK-AGLYLLARFTPVFAGTea 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 153 ---ITTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPY---NPNLTLLNLVIYILLTIPMFISLmMNSATT 226
Cdd:TIGR00940 269 wfwIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLgspSYHYQGDDSKIYALAAVAAVFHL-INHATF 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 227 INSFSMA-------------------WNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKndcSILSTLMAMMAL 287
Cdd:TIGR00940 348 KGSLFMAagiidhetgtrdirklgglFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAIT---AHLVNPFDTVTL 424
|
330
....*....|...
gi 226464090 288 LNLFFYTRLIYSM 300
Cdd:TIGR00940 425 GYLFPYVATVASV 437
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-271 |
4.67e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.50 E-value: 4.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 110 PFHYWLPEVTQGIP-----MH------TGLILLTwqKIAPLSILYQIYQLLNPTITTILAItsvfIGAWGGLNQTQTRKI 178
Cdd:PRK12650 226 PFHFWLPEAMAAITpvsafLHaaavvkAGIYLLL--RFSPVFHDVAVWNWLLIIVGMITAL----MGAVFAVQKTDLKKL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 179 MAYSSIAHMGWMVAILPYNPNLTLLNLVIYILL------TIPMFISLMMNSATT--INSFSMAWNKTPMILAMTSTILLS 250
Cdd:PRK12650 300 TAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAhalfksSLFMLIGVVDHQAGTrdIRRLGSLWRRMPFTFVSVTIAALS 379
|
170 180
....*....|....*....|.
gi 226464090 251 MGGLPPLTGFLPKWTIISELL 271
Cdd:PRK12650 380 MAAVPPLFGFVSKEGMLTAFL 400
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
25-206 |
8.12e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 47.40 E-value: 8.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 25 NLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAII----------LNYKQSGMWMFQQQTNNML 94
Cdd:PRK07363 128 NLLLFFLFYELELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFLgivwlsgstsFDYDAISTQNLSLNTQLIL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 95 LNMTLISLAMKLGLAPFHYWLPEV-TQGIPMHTGLILLTWQKIAP-------LSILYQIYQLLNPTITTILAITSVFiGA 166
Cdd:PRK07363 208 LTGLLLGFGIKIPLVPLHTWLPDAyTEASPAVAILLGGVLAKLGTygllrfgLQLFPQTWSLVAPGLAIIGTISVIY-GA 286
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 226464090 167 WGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLV 206
Cdd:PRK07363 287 LSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAV 326
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
8-300 |
9.52e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 47.07 E-value: 9.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 8 IIYFTIFMGPVITMSSSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSG---MW 84
Cdd:PRK08377 112 MLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGtlnMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 85 MFQQQTNNMLLNMTLISLAMK-LGLA------PFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPT----- 152
Cdd:PRK08377 192 HIAQLAGTIDPTVAQVGLALLiFGLAveaelfPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNAngwss 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 153 ---ITTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNL----TLLNLVIYILLTIPMFISL----MM 221
Cdd:PRK08377 272 vlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAVgyvgIT 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 226464090 222 NSATTINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSM 300
Cdd:PRK08377 352 LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTM 430
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-220 |
4.96e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.91 E-value: 4.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 54 EAATKYFLTQATASMIMLLAIILNYKQSGM----------WMFQQQTNNMLLNMTLISLAMKLGLAPFHYWLPEVTQGIP 123
Cdd:MTH00226 182 QAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyltlascsHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAP 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 124 MHT--------------GLILLTWqKIAPLSIlyqiyQLLNPTITTiLAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGw 189
Cdd:MTH00226 262 VAGsvllagillklggyGLVRLSW-PILPLGA-----QNLAPAVIA-MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG- 333
|
170 180 190
....*....|....*....|....*....|.
gi 226464090 190 MVAILPYNPNLTLLNLVIYILLTIPMFISLM 220
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLL 364
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
93-267 |
6.61e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.56 E-value: 6.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 93 MLLNMTLISLAMKLGLapfHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAIT-----SVFIGAW 167
Cdd:MTH00032 229 ILLLIGCIGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAAT 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 168 GGLNQTQTRKIMAYSSIAHMGWMVAILPY--NPNLTLLNLVIYILLTIPMFISL-MMNSATTINSFSMA-----WNKTPM 239
Cdd:MTH00032 306 VGLVQNDLKKVIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAgSVIHSTTVDEQDMRkmgglIHSIPF 385
|
170 180
....*....|....*....|....*...
gi 226464090 240 ILAMTSTILLSMGGLPPLTGFLPKWTII 267
Cdd:MTH00032 386 TYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
18-191 |
1.38e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 43.59 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 18 VITMS--SSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSgmwmfQQQTNNMLL 95
Cdd:PRK08676 114 VITFAffSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLT-----RQALGTGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 96 NMT---------------------LISLAMKLGLAPFHYWLPEVTQGIPMHTGLILL-TWQKIAPLSILyQIYQLLNPT- 152
Cdd:PRK08676 189 NWTelaahasllspsvlgasflfiFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSgTVLNIGIYGIL-RLSALLRQSg 267
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 226464090 153 -------ITTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMV 191
Cdd:PRK08676 268 aaeqfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLML 313
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-272 |
1.99e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.18 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 23 SSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSG------MWMFQQQ--TNNML 94
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGtlnmgdMFLIIQDlpTNRAI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 95 LNMTL---ISLAMKLGLAPFHYWLPEVTQGIPMHTGLILL-TWQKIAPLSILYQIY----------QLLNPTITTILAIT 160
Cdd:PRK12662 209 QIGVLfimVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIIRIVYdvfkanfvftTLPFNNVFMILAAL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 161 SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSA--------TTINSFSM 232
Cdd:PRK12662 289 AIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGsisyhfgtTKLEDCLN 368
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 226464090 233 AWNKTPMILAMTSTILLSMGGLPPLTGFLPKWTIISELLK 272
Cdd:PRK12662 369 LWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
23-188 |
2.21e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.71 E-value: 2.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 23 SSNLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLA----------IILNYKQSGMWMFQQQTNN 92
Cdd:PRK12561 106 AQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAglalalsgdtFTFDLAELGAKSYPLALEL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 93 MLLNMTLISLAMKLGLAPFHYWLP----EVTQGIPMHTGLILLTWQKIA----PLSILYQIYQLLNPtITTILAITSVFI 164
Cdd:PRK12561 186 LLYAGFLIAFGVKLPIFPLHTWLPdahgEASAPVSMILAGVLLKMGGYAlirfNVQMLPDAHVYFAP-ALAILGVVNIIY 264
|
170 180
....*....|....*....|....
gi 226464090 165 GAWGGLNQTQTRKIMAYSSIAHMG 188
Cdd:PRK12561 265 GALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
54-188 |
2.79e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 42.73 E-value: 2.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 54 EAATKYFLTQATASMIMLLAIILNYKQSGMWMFQ----QQTNNMLLNMTLI----SLAMKLGLAPFHYWLPEVTQGIPMH 125
Cdd:MTH00217 160 QASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQalccLKIEKELQYFIFLgfflSLAIKIPKIPFHIWLPQAHVEAPVA 239
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 226464090 126 TGLIL--------------LTWqkiaplSILYQIYQLLNPTITTiLAITSVFIGAWGGLNQTQTRKIMAYSSIAHMG 188
Cdd:MTH00217 240 GSVILagvllklggygfirFSW------PLLPEASEYFSPLIQT-LSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
93-314 |
3.01e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 41.78 E-value: 3.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 93 MLLNMTLISLAMKLGLAPFHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNptitTILAITSVFIGAWGGLNQ 172
Cdd:MTH00091 58 SFGYFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNF----FFLLLFGLLICFFQMFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 173 TQTRKIMAYSSIAHMGWMVAILPYNPNLTLLNLVIYILLTIPMFISLMMNSATTINSFSMawnktpmilamtstiLLSMG 252
Cdd:MTH00091 134 KSYKNLLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVSWET---------------LLVFM 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 226464090 253 GLPPLTGFLPKWTIISELLKNDCSILSTLMAMMALLNLFFYTRLIYSMSLTMFPTNNNSKMI 314
Cdd:MTH00091 199 NLPFSVTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGF 260
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-188 |
9.50e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 40.82 E-value: 9.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 55 AATKYFLTQATASMIMLLAIILNYKQSGMWMFQqqtnnMLLNMTL-------------ISLAMKLGLAPFHYWLPEVTQG 121
Cdd:MTH00204 164 ASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQ-----ILLNIKLplsiqkwllvgffLSLAVKIPQIPFHIWLPQAHVE 238
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 226464090 122 IPMHTGL----ILLTWQKIAPLSILYQIY----QLLNPTItTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMG 188
Cdd:MTH00204 239 APVAGSVilagILLKLGGYGFLRFSWPLFpaasEYFAPLI-VMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMG 312
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-324 |
9.81e-04 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 36.85 E-value: 9.81e-04
10 20 30
....*....|....*....|....*....|....
gi 226464090 291 FFYTRLIYSMSLTMFPTNNNSKMISHHTNLKYNL 324
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTL 34
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-263 |
1.23e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.58 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 10 YFTIFMGPVITMS-SSNLLLMWVGLEVSLLAIVPLLTN-KKSPRSTEAATKYFLTQATASMIMLLAIILNYKQSGMWMFQ 87
Cdd:PRK12649 116 YLLLFMGSMIGMVfSGNTIQLFIFWELTSITSFMLIGYwRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 88 QQTNN--------------MLLNMTLISLAMKLGLAPFHYWLPEVTQG-IPMHTGLILLTWQKiAPLSILYQIYQLLNPT 152
Cdd:PRK12649 196 TILQDselienikghplflITLILIFIGAAAKSAQGPFYIWLPNAMEApTPVSAFLHSATMVK-AGVYLVARIHPIFSGT 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 153 -----ITTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPYN----PNLTLLNLVIYIL------LTIPMFI 217
Cdd:PRK12649 275 eawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTtyhePGLGVAAATFHLLnhatfkACLFLVA 354
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 226464090 218 SLMMNSATT--INSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPK 263
Cdd:PRK12649 355 GIVAHEAATrdIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSK 402
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
25-189 |
1.56e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.08 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 25 NLLLMWVGLEVSLLAIVPLLTNKKSPRSTEAATKYFLTQATASMIMLLA----------IILNYKQSGMWMFQQQTNNML 94
Cdd:PRK02546 136 DMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAalamafygdtPTFDMTALAAKDFGLGFQLLC 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 95 LNMTLISLAMKLGLAPFHYWLP----EVTQGIPMHTGLILLTWQKIAPL----SILYQIYQLLNPtITTILAITSVFIGA 166
Cdd:PRK02546 216 YAGLLIAYGVKLPIVPLHTWLPdahgEATAPVHMLLAGILLKMGGYALLrmnaGMLPDAHAQFAP-LLIVLGVVNIIYAA 294
|
170 180
....*....|....*....|...
gi 226464090 167 WGGLNQTQTRKIMAYSSIAHMGW 189
Cdd:PRK02546 295 LTSFAQRNLKRKIAYSSISHMGF 317
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
54-191 |
5.37e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.47 E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 54 EAATKYFLTQATASMIMLLAIILNYKQSGMWMFQQQTNNM--LLNMTLISLAMKLGLA--------------PFHYWLPE 117
Cdd:PRK07376 173 DAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLseLVSSGAVSGWLALLLCilvflgpmaksaqfPLHVWLPD 252
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 226464090 118 VTQGIPMHTGLILLTWQKIAPLSILYQIYQLLN--PTITTILAIT---SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMV 191
Cdd:PRK07376 253 AMEGPTPISALIHAATMVAAGVFLVARMYPVFEqfPAVMTVIAWTgaiTAFLGASIALTQNDIKKGLAYSTISQLGYMV 331
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
6-273 |
6.06e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 38.23 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 6 LIIIYFTIFMGPVITMSSSNLLLM---WVGLEVSLLAIVPLLTNKKSPRSTeaatkyFLTQATASMIMLLA-IILNYKQS 81
Cdd:PRK06459 74 LSSLYILTILGMAIVLTSDNYLLFlagWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAgFAWAFIIS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 82 GMWMFQQQTNNMLLNMTLISLAMKLGLAPFH--YWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQLLNPTITTILAI 159
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 160 T-------SVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVA-----ILPYNPNLTLLNLVIYILLTIPMFISL------MM 221
Cdd:PRK06459 228 TilaigafSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSVaktglfLS 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 226464090 222 NSATTINSFSMAWNKTPMILAMTSTIL-LSMGGLPPLTGFLPKWTIISELLKN 273
Cdd:PRK06459 308 SGLQEKQSITYSKKIRNRWIELGLTLLaSSLSGLLPNIGGVASWLLLESLFMF 360
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
11-312 |
7.53e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.07 E-value: 7.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 11 FTIFMgpVITMSSSNLLLMWVGLE----VSLLAIVPLLTNKKSPRsteAATKYFLTQATASMIMLLAIILNYKQSGMWMF 86
Cdd:MTH00210 120 FTFLM--IVLVTSDNYVQLFIGWEgvglCSYLLINFWLTRIKANK---AAIKAMLINRVGDIGLVLAMIMILKEFGTLEF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 87 QQQTNNMLL-----NMTLISLAM---------KLGLapfHYWLPEVTQGIPMHTGLILLTWQKIAPLSILYQIYQL---- 148
Cdd:MTH00210 195 STISSLLVTninkeSLTIICLLLfigavgksaQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLfegs 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 149 -LNPTITTILAITSVFIGAWGGLNQTQTRKIMAYSSIAHMGWMVAILPY-NPNLTLLNLVIYILLTIPMFISL-----MM 221
Cdd:MTH00210 272 pLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIsNYSTSLFHLMNHAFFKALLFLSAgsvihAV 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226464090 222 NSATTINSFSMAWNKTPMILAMTSTILLSMGGLPPLTGFLPKwTIISELLKNDCSILST--LMAMMALLNLFFYTRLIYs 299
Cdd:MTH00210 352 SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSK-DLILELTYDKYYIAFAywLGSFSALLTAFYSIRLIY- 429
|
330
....*....|...
gi 226464090 300 msLTmFPTNNNSK 312
Cdd:MTH00210 430 --LT-FITNTNSK 439
|
|
| |
