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Conserved domains on  [gi|281416546|ref|YP_003347347|]
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tail protein [Enterococcus phage phiFL2A]

Protein Classification

phage tail family protein( domain architecture ID 107096)

uncharacterized phage tail family protein

CATH:  2.60.120.860|2.40.30.200|4.10.80.130
Gene Ontology:  GO:0044423

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Sipho_tail super family cl17486
Phage tail protein; This family consists of several Siphovirus and other phage tail component ...
 7-89 1.07e-39

Phage tail protein; This family consists of several Siphovirus and other phage tail component proteins as well as some bacterial proteins of unknown function.


The actual alignment was detected with superfamily member PHA01795:

Pssm-ID: 450183  Cd Length: 280  Bit Score: 132.02  E-value: 1.07e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 281416546   7 GAEFKLSIDEREFKYVGKRNILSGDKFLLEGTSFTLNGLNINDQTNIEYFILKPNEVGFIPFSTSFnIGevEINILNKVD 86
Cdd:PHA01795 201 QTNFYIEIDGRRFEFKQNSQLQNSDKLLLTGIATTLNGNYVNAKTNYEYFIFNPNPNKRITYKTDF-LG--TIRILNFVE 277


                 ...
gi 281416546  87 LYR 89
Cdd:PHA01795 278 LYK 280
 
Name Accession Description Interval E-value
PHA01795 PHA01795
hypothetical protein
 7-89 1.07e-39

hypothetical protein


Pssm-ID: 177320  Cd Length: 280  Bit Score: 132.02  E-value: 1.07e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 281416546   7 GAEFKLSIDEREFKYVGKRNILSGDKFLLEGTSFTLNGLNINDQTNIEYFILKPNEVGFIPFSTSFnIGevEINILNKVD 86
Cdd:PHA01795 201 QTNFYIEIDGRRFEFKQNSQLQNSDKLLLTGIATTLNGNYVNAKTNYEYFIFNPNPNKRITYKTDF-LG--TIRILNFVE 277


                 ...
gi 281416546  87 LYR 89
Cdd:PHA01795 278 LYK 280
 
Name Accession Description Interval E-value
PHA01795 PHA01795
hypothetical protein
 7-89 1.07e-39

hypothetical protein


Pssm-ID: 177320  Cd Length: 280  Bit Score: 132.02  E-value: 1.07e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 281416546   7 GAEFKLSIDEREFKYVGKRNILSGDKFLLEGTSFTLNGLNINDQTNIEYFILKPNEVGFIPFSTSFnIGevEINILNKVD 86
Cdd:PHA01795 201 QTNFYIEIDGRRFEFKQNSQLQNSDKLLLTGIATTLNGNYVNAKTNYEYFIFNPNPNKRITYKTDF-LG--TIRILNFVE 277


                 ...
gi 281416546  87 LYR 89
Cdd:PHA01795 278 LYK 280
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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