|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-449 |
1.32e-145 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 422.64 E-value: 1.32e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 1 MLSVLFGVCGLILVSVVdarvKTCWLVVNMIFIGSLMMLMKTSMFMGVYSLNGSVMGCDTASYWLIILTFWICGLMMVAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFL----KNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 81 SKVFQGGMHLKYFLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 161 GILLVGMHSGGLMIPLFSSWIMNTGSFYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFP 240
Cdd:MTH00163 157 GIFYLYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 241 LMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFC 320
Cdd:MTH00163 237 FFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFC 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 321 LANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSI 400
Cdd:MTH00163 317 LANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSL 396
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 306960099 401 YLYSYSQHGVFYSGAFSFSTGKFREFHILFLHWMPLNFMVLSGDLFIVY 449
Cdd:MTH00163 397 YLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
36-446 |
2.05e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 357.61 E-value: 2.05e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 36 LMMLMKTSMFMGVYSLNGsVMGCDTASYWLIILTFWICGLMMVASSKVFQGGMHLKYFLLVVTTLTVMLYCSFSSLSLIS 115
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSE-LFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 116 FYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGG---LMIPLFSSWIMNTGSFYLMMT 192
Cdd:MTH00150 80 FYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSsfmLLISSLRKLLSSMGLWGLLVF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 193 VAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQV 272
Cdd:MTH00150 160 LAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 273 DMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWF 352
Cdd:MTH00150 240 DVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 353 LLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSIYLYSYSQHGVFYSGAFSFSTGKFREFHILFLH 432
Cdd:MTH00150 320 LFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLH 399
|
410
....*....|....
gi 306960099 433 WMPLNFMVLSGDLF 446
Cdd:MTH00150 400 WVPLLLLILKSDLL 413
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
26-448 |
7.19e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 339.26 E-value: 7.19e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 26 LVVNMIFIGSLMMLMKTSMFMGVYSLNGSVMGCDTASYWLIILTFWICGLMMVASSKVFQGGMHLKYFLLVVTTLTVMLY 105
Cdd:MTH00205 23 FFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILI 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 106 CSFSSLSLISFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGIllVGMHSGGLMIPLFSSWIMNTG 185
Cdd:MTH00205 103 LSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL--FFLNSLNFSLSMFFNFPLNFS 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 186 SFYL-----MMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVISLMG 260
Cdd:MTH00205 181 DFYLflywiFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 261 GLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGL 340
Cdd:MTH00205 261 GVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGV 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 341 LSFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSIYLYSYSQHGVFYSGAFSFST 420
Cdd:MTH00205 341 LNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLA 420
|
410 420
....*....|....*....|....*...
gi 306960099 421 GKFREFHILFLHWMPLNFMVLSGDLFIV 448
Cdd:MTH00205 421 ISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-447 |
1.95e-111 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 335.94 E-value: 1.95e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 1 MLSVLFGVCGLILVSVVDARVKTCwLVVNMIFIGSLMMLMKTSMFMGVYSLNGSVMGCDTASYWLIILTFWICGLMMVAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWA-LTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 81 SKVFQGGMHLKYFLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLL 160
Cdd:MTH00014 80 FKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 161 GILLVGMHSGGLMIPLFSSW---IMNTGSFYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMR 237
Cdd:MTH00014 160 SILLIFYTNNSLSMLMSSMEppsIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 238 VFPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSG 317
Cdd:MTH00014 240 MSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 318 LFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSAL 397
Cdd:MTH00014 320 LFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 306960099 398 YSIYLYSYSQHGVFYSGAFSFSTGKFREFHILFLHWMPLNFMVLSGDLFI 447
Cdd:MTH00014 400 YSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
56-436 |
6.61e-99 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 303.66 E-value: 6.61e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 56 MGCDTASYWLIILTFWICGLMMVASSKvfqggmHLKY--------FLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPT 127
Cdd:MTH00124 56 LGIDQISAPLLVLSCWLLPLMILASQN------HLQHeplqrkrtFLTTLILLQTFLILAFSATELTLFYIMFEATLIPT 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 128 LFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLF--------SSWIMNTGSFYLMMtvAFLVKM 199
Cdd:MTH00124 130 LILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLqlthptltNSWTNLLLWLACLM--AFMVKM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 200 PMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIA 279
Cdd:MTH00124 208 PLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 280 YSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNM 359
Cdd:MTH00124 288 YSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNM 367
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 306960099 360 AAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSIYLYSYSQHGVFYSGAFSFSTGKFREFHILFLHWMPL 436
Cdd:MTH00124 368 ALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPL 444
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-442 |
3.03e-97 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 299.58 E-value: 3.03e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 1 MLSVLFGVCGLILVSVVdarVKTCWLVVNMIFIGSLMMLMKTSMFMGVYSLN----GSVMGCDTASYWLIILTFWICGLM 76
Cdd:MTH00044 1 MITLILLSLGIAITSWI---VPKNKLWPISISQSSLISLLSLFLLNNHWSSSwhnlSLSLATDSLSSPLIILSCWLAPLS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 77 MVASSKVFQGGMHL--KYFLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLA 154
Cdd:MTH00044 78 LLASINHLSNNSPNnqRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 155 SLPLLLGILLVGMHSGGLMIPLFS-SWIMNTGSFYLMM-----TVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILL 228
Cdd:MTH00044 158 SLPLLISLIAIYSSSSSLSIPLSElNWLTSLSSNSSSIwwifcILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 229 KLGGYGIMRVFPLMLKVAVK-LNWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVL 307
Cdd:MTH00044 238 KLGGYGLIRLINLFSLPSANnISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALIL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 308 MLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIG-SFWPYLI 386
Cdd:MTH00044 318 MIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISwSILSFPI 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 306960099 387 IlVLLSFFSALYSIYLYSYSQHGVFYSGAFSFSTGKFREFHILFLHWMPLNFMVLS 442
Cdd:MTH00044 398 I-GLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIIN 452
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
37-446 |
2.01e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 284.14 E-value: 2.01e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 37 MMLMKTSMFMGVYSLNGSvMGCDTASYWLIILTFWICGLMMVAS--SKVFQGGMHLKYFLLVVTTLTVMLYCSFSSLSLI 114
Cdd:MTH00206 37 LLWFKWSSEVGWSFSNLY-LSYDPLSSPLVILSCWLLPLMFLASqnHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 115 SFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASL--PLLLGILLVGMHSGGLMIPLFSSWIMNTGSFY-LMM 191
Cdd:MTH00206 116 LFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLplLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWwLAC 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 192 TVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQ 271
Cdd:MTH00206 196 ILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQ 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 272 VDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWW 351
Cdd:MTH00206 276 TDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWW 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 352 FLLSVGNMAAPPSMNLMGEIFLLNSIIgSFWPYLIILVLLSF-FSALYSIYLYSYSQHGVFYSGAFSFSTGKFREFHILF 430
Cdd:MTH00206 356 LLFFLANLGLPPFPNLFGELLIITSLF-SWSNFTLPLLGLGFlFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLF 434
|
410
....*....|....*.
gi 306960099 431 LHWMPLNFMVLSGDLF 446
Cdd:MTH00206 435 LHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
25-446 |
1.51e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 279.49 E-value: 1.51e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 25 WLVVNMIFIGSLMMLMKTSMFM---GVYSLNGSVMGCDTASYWLIILTFWICGLMMVASskvfQGGMHL------KYFLL 95
Cdd:MTH00068 22 WLWTLTTTNSLIIAFLSLMWFNlpsETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS----QNHLKNepinrqRTYIS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 96 VVTTLTVMLYCSFSSLSLISFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIP 175
Cdd:MTH00068 98 MLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 176 L--FSSWIMNT----GSFYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKL 249
Cdd:MTH00068 178 LleLMSPMQLMtytnKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKEL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 250 NWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERS 329
Cdd:MTH00068 258 SYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERT 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 330 GSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIgSFWPYLIILVLLS-FFSALYSIYLYSYSQH 408
Cdd:MTH00068 338 HSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLF-NWSNWTILITGLGtLITAAYTLYMFLMTQR 416
|
410 420 430
....*....|....*....|....*....|....*...
gi 306960099 409 GVFYSGAFSFSTGKFREFHILFLHWMPLNFMVLSGDLF 446
Cdd:MTH00068 417 GPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELI 454
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
30-436 |
7.85e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 267.53 E-value: 7.85e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 30 MIFIGSLMMLMKTSMFMGVYSLNGSVmgcDTASYWLIILTFWICGLMMVASSKvfqggmHL--------KYFLLVVTTLT 101
Cdd:MTH00110 33 LISLISLLLLNQPNDNSLNFSLLFFS---DSLSTPLLILTTWLLPLMLMASQH------HLskepltrkKLYITMLILLQ 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 102 VMLYCSFSSLSLISFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLFSSW- 180
Cdd:MTH00110 104 LFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWa 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 181 --IMNTGS---FYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLV 255
Cdd:MTH00110 184 qpLPNSWSnnlLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLM 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 256 ISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLM 335
Cdd:MTH00110 264 LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMI 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 336 MNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLlnsIIGSF-WPYL-IILVLLS-FFSALYSIYLYSYSQHGVFY 412
Cdd:MTH00110 344 LARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFV---IMSSFsWSNItIILMGLNmLITALYSLYMLITTQRGKLT 420
|
410 420
....*....|....*....|....
gi 306960099 413 SGAFSFSTGKFREFHILFLHWMPL 436
Cdd:MTH00110 421 HHINNIKPSFTRENTLMALHLLPL 444
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
30-445 |
2.67e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 247.95 E-value: 2.67e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 30 MIFIGSLMMLmKTSMFMGVYSLNgSVMGCDTASYWLIILTFWICGLMMVASSK--VFQGGMHLKYFLLVVTTLTVMLYCS 107
Cdd:MTH00127 33 LIALASLTWL-KNLSETGWSSLN-LYMATDPLSTPLLVLTCWLLPLMILASQNhtAPEPINRQRMYITLLTSLQIFLILA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 108 FSSLSLISFYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGL-MIPLFSSWIMNTGS 186
Cdd:MTH00127 111 FGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLsMLTLQYSQPLQLSS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 187 FYLMMT-----VAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVISLMGG 261
Cdd:MTH00127 191 WADKLWwagclLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGI 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 262 LLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLL 341
Cdd:MTH00127 271 IMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQ 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 342 SFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSIYLYSYSQHGVFYSGAFSFSTG 421
Cdd:MTH00127 351 MILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPS 430
|
410 420
....*....|....*....|....
gi 306960099 422 KFREFHILFLHWMPLNFMVLSGDL 445
Cdd:MTH00127 431 HTREHLLMALHLLPLLLLILKPEL 454
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
117-392 |
3.63e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 177.12 E-value: 3.63e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 117 YVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLFS-------SWIMNTGSFYL 189
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltgglNSSGLLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 190 MMtVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVISLMGGLLVSFICM 269
Cdd:pfam00361 88 IL-VGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAAL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 270 NQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLA-NISYERSGSRSLMMNRGLLSFMPSLS 348
Cdd:pfam00361 167 VQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILA 246
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 306960099 349 LWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLS 392
Cdd:pfam00361 247 LVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
62-403 |
8.18e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 176.43 E-value: 8.18e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 62 SYWLIILTFWICGLMMVASSKVFQGGMHLKYFL-LVVTTLTVMLYCSFSSLSLisfYVFFEASLIPTLFLILGWGYqPER 140
Cdd:COG1008 84 SLPLVLLTALLTPLAILASWNEIKKRPKLYYALlLLLEAGMIGVFLALDLFLF---YVFWELMLIPMYFLIGIWGG-ERR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 141 IQAGVYLMFYTLLASLPLLLGILLVGMHSGGL-----------MIPLFSSWIMntgsfyLMMTVAFLVKMPMYLVHLWLP 209
Cdd:COG1008 160 IYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaelaaapLPLTAQLLLF------LAFFIAFAVKVPMFPFHTWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 210 KAHVEAPISGSMILAGILLKLGGYGIMR-VFPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSM 288
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 289 VIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLM 368
Cdd:COG1008 314 VLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
330 340 350
....*....|....*....|....*....|....*
gi 306960099 369 GEIFLLNSIIGSFWPYLIILVLLSFFSALYSIYLY 403
Cdd:COG1008 394 GEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
55-430 |
1.51e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 172.93 E-value: 1.51e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 55 VMGCDTASYWLIILTFW---ICGLMMVASSKVFqggmhLKYFLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPtLFLI 131
Cdd:MTH00217 75 VFAVDGISIFFLILTALltpICILISWNSIKFL-----IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIP-MFLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 132 LG-WGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLFSSWIMNTGSFYLMMTVAFL---VKMPMYLVHLW 207
Cdd:MTH00217 149 IGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFFLslaIKIPKIPFHIW 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 208 LPKAHVEAPISGSMILAGILLKLGGYGIMRV-FPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHM 286
Cdd:MTH00217 229 LPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 287 SMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMN 366
Cdd:MTH00217 309 GLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCN 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 306960099 367 LMGEIFllnSIIGSFWPYLIILVLLSF---FSALYSIYLYSYSQHGVFYSGAFSFSTGKFREFHILF 430
Cdd:MTH00217 389 FVGEFL---SLLAAFEYSYIVGVLASLgmvLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLL 452
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-403 |
3.26e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 172.17 E-value: 3.26e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 55 VMGCDTASYWLIILTFW---ICGLMMVASSKVFqggmhLKYFLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPTLFLI 131
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLlipICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLI 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 132 LGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGG------LMIPLFSS---WIMnTGSFylmmtVAFLVKMPMY 202
Cdd:MTH00204 153 GIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTtdyqilLNIKLPLSiqkWLL-VGFF-----LSLAVKIPQI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 203 LVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRV-FPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIAYS 281
Cdd:MTH00204 227 PFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 282 SVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAA 361
Cdd:MTH00204 307 SVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGF 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 306960099 362 PPSMNLMGEIFllnSIIGSFWPYLIILVLLS---FFSALYSIYLY 403
Cdd:MTH00204 387 PLSCNFVGEFF---SLLAAFEYSLGLGVLVTsgmVWSAAYSLYLY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-403 |
1.70e-45 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 164.99 E-value: 1.70e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 56 MGCDTASYWLIILTFWICGLMMVASSKVFQGGMHlKYFLLVVTTLTVMLYCSFSSLSLISfYVFFEASLIPTLFLILGWG 135
Cdd:PRK05846 78 LGVDGISLLLVVLTALLTPLAVLASWEEIKKRVK-FYMAALLWLEGGVIGVFAALDLLLF-YVFFEAMLIPMYFLIGVWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 136 YqPERIQAGVYLMFYTllaslplllgillvgmHSGGL-----MIPLFSSWIMNTGSF---YLMMT--------------- 192
Cdd:PRK05846 156 G-KNRIYAATKFFLYT----------------LLGSLlmlvaIIYLVVVYYNATGTFdiaDLLNLplppgvqywlflaff 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 193 VAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMR-VFPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQ 271
Cdd:PRK05846 219 IAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 272 VDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWW 351
Cdd:PRK05846 299 TDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFF 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 306960099 352 FLLSVGNMAAPPSMNLMGEiFLlnSIIGSF---WPYLIILVLLSFFSALYSIYLY 403
Cdd:PRK05846 379 LFFAMASLGLPGTSGFVGE-FL--ILLGSFqvnPVIAFIATTGLILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
56-403 |
2.34e-45 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 164.34 E-value: 2.34e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 56 MGCDTASYWLIILTFWICGLMMVASSKVFQGGMHLKYFL-LVVTTLTVMLYCSFSSLSLisfYVFFEASLIPTLFLILGW 134
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQKRVKEFYALlLLLEAGVIGVFLALDLFLF---YVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 135 GyQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLM-IPLFSSWIMNTGSFYLMMT---VAFLVKMPMYLVHLWLPK 210
Cdd:TIGR01972 150 G-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFdLLELLNLPLPFGVQTWLFLaffIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 211 AHVEAPISGSMILAGILLKLGGYGIMRV-FPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMV 289
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 290 IGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMG 369
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350
....*....|....*....|....*....|....
gi 306960099 370 EIFLLNSIIGSFWPYLIILVLLSFFSALYSIYLY 403
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-428 |
1.58e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 154.31 E-value: 1.58e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 55 VMGCDTASYWLIILTFWI--CGLMMVASSKVFQggmhLKYFLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPtLFLIL 132
Cdd:MTH00226 97 VFAVDGISIYFIILTGFIvpCSILISWHSVKYL----TKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIP-MYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 133 G-WGYQPERIQAGVYLMFYTLLASLPLLLGILLV-GMHSGGLMIPLFSSWIMNTGS----FYLMMTVAFLVKMPMYLVHL 206
Cdd:MTH00226 172 GiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLyNIHGTTDYLTLASCSHVVSEQtqkwIFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 207 WLPKAHVEAPISGSMILAGILLKLGGYGIMRV-FPLMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAH 285
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 286 MSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSM 365
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960099 366 NLMGEIFllnSIIGSF-WPYLIILVLLS--FFSALYSIYLYSYSQHGVFYSGAFSFSTGKFREFHI 428
Cdd:MTH00226 412 NFIGEYL---SILSSFnWNPIIGVFVCSgvILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYI 474
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
36-421 |
1.57e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 146.59 E-value: 1.57e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 36 LMMLMKTSMFMGVYSLNGSVMGCDTASYWLIILTFWICGLMMVASSKVFQggmhlkyFLLVVTTLTVMLYCSFSSLSLIS 115
Cdd:MTH00094 14 LFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFN-------LLILSNLLILICLLFFVSSNMLM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 116 FYVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLFSSWIMntgsfYLMMTVAF 195
Cdd:MTH00094 87 LYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEM-----FFILSLSF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 196 LVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVfplMLKVAVKLNWVFLVISLMGGLLVSFICMNQVDMK 275
Cdd:MTH00094 162 MMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 276 SLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLS 355
Cdd:MTH00094 239 SLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVF 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960099 356 VGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSIYLYSYSQHGVFYSGAFSFSTG 421
Cdd:MTH00094 319 LSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVG 384
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
117-400 |
5.62e-31 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 123.72 E-value: 5.62e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 117 YVFFEASLIPTLFLILGWGYqPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGL-------MIPLFSSWIMNTGsfYL 189
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLnmadlaaRLAELDPGLLLAA--FA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 190 MMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVK--LNWVFLVISLMGGLLVSFI 267
Cdd:COG0651 210 LLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPAlfLGTLLLVLGLLTMLVGALG 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 268 CMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSL 347
Cdd:COG0651 290 ALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLT 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 306960099 348 SLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSI 400
Cdd:COG0651 370 AAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYF 422
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
188-345 |
6.98e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 109.74 E-value: 6.98e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 188 YLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVA-VKLNWVFLVISLMGGLLVSF 266
Cdd:PRK12561 188 YAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAhVYFAPALAILGVVNIIYGAL 267
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960099 267 ICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMP 345
Cdd:PRK12561 268 NAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
187-412 |
1.09e-23 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 103.49 E-value: 1.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 187 FYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVIslMGGLLV-- 264
Cdd:CHL00011 213 FYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVI--VGAIQIiy 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 265 -SFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSF 343
Cdd:CHL00011 291 aASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIP 370
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 306960099 344 MPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGS----FWPYLIILVLLSFFSALYSIYLYSYSQHgVFY 412
Cdd:CHL00011 371 MPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSqkylLMPKILITFVMAIGMILTPIYLLSMLRQ-MFY 442
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
117-361 |
1.33e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 100.16 E-value: 1.33e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 117 YVFFEASLIPTLFLILGWGYQpERIQAGVYLMFYTLLASLPLLLGILLVGMHSGglmIPLFSSWIMNTGSFYL------- 189
Cdd:PRK06473 133 FLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSG---ASSFDYEPLRSHTLPLstqllll 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 190 -MMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMR----VFPLMLKVAVKLNWVFLVISLMGGLLV 264
Cdd:PRK06473 209 aPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRfgvgLFPEAWVYLAPWLATWAVVSVLYGASC 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 265 SFIcmnQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFM 344
Cdd:PRK06473 289 AIA---QKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPE 365
|
250
....*....|....*..
gi 306960099 345 PSLSLWWFLLSVGNMAA 361
Cdd:PRK06473 366 RGLPITGSLMILGVMAS 382
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-405 |
2.62e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 93.02 E-value: 2.62e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 190 MMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMR----VFPLMLKVAVKLNWVFLVISLMGGLLVS 265
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftVFGGDFRFALGLGWLLAVLALLSMLVGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 266 FICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMP 345
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 306960099 346 SLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGS-FWPYLIILVLLSFFSALYSIYLYSY 405
Cdd:PRK08375 367 LTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAgQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
188-362 |
4.54e-20 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 92.46 E-value: 4.54e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 188 YLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVA----VKLNWVFLVISLMGGLL 263
Cdd:PRK02546 216 YAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAhaqfAPLLIVLGVVNIIYAAL 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 264 VSFIcmnQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSF 343
Cdd:PRK02546 296 TSFA---QRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQK 372
|
170
....*....|....*....
gi 306960099 344 MPSLSLWWFLLSVGNMAAP 362
Cdd:PRK02546 373 MRKMFAMWTACSLASLALP 391
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
117-401 |
5.11e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 86.30 E-value: 5.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 117 YVFFEASLIPTLFLILGWGYQpERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGlmiPLFSSWIMNTGSFYL------- 189
Cdd:PRK07363 133 FLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGS---TSFDYDAISTQNLSLntqlill 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 190 -MMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMR----VFPLMLKVAVKLNWVFLVISLMGGllv 264
Cdd:PRK07363 209 tGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRfglqLFPQTWSLVAPGLAIIGTISVIYG--- 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 265 SFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFM 344
Cdd:PRK07363 286 ALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPI 365
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 306960099 345 PSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSIY 401
Cdd:PRK07363 366 RGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
204-402 |
1.32e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 84.98 E-value: 1.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 204 VHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVK--LNWVFLVISLMGGLLVSFICMNQVDMKSLIAYS 281
Cdd:PRK06458 233 MHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSdfPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYS 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 282 SVAHMSMV-----IGGLMslnywGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSV 356
Cdd:PRK06458 313 SIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGAL 387
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 306960099 357 GNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSIYL 402
Cdd:PRK06458 388 AIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVR 433
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
117-441 |
4.33e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 79.97 E-value: 4.33e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 117 YVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLFSSWIMNTGSFYLMMTVAFL 196
Cdd:MTH00062 97 WFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFI 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 197 VKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVavkLNWVFLVISLMGGLLVSFICMNQVDMKS 276
Cdd:MTH00062 177 TKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSG---SFLGYLFLCCLFSVFFLITACSELDGKR 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 277 LIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSV 356
Cdd:MTH00062 254 WLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFL 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 357 GNMAAPPSMNLMGEIFLLNSIIGSFwPYLIILVLLSFFSALYSIYLYSYSQHGVFYSGAFSFSTGKFREFHILFLHWMPL 436
Cdd:MTH00062 334 SLCSFPPTIQFFCEVFLVSSSFGVL-VYLLFWCFYLFFGGLVPLILLGHLLIRSESYESINVSNYSYLFFLIFLVFWCYL 412
|
....*
gi 306960099 437 NFMVL 441
Cdd:MTH00062 413 GFLVL 417
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
169-398 |
4.21e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 77.32 E-value: 4.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 169 SGGLMIPLFSSWIMNTGSFYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVK 248
Cdd:PRK12667 207 SFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 249 LNW-------VFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCL 321
Cdd:PRK12667 287 LIDfraalspILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLA 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 306960099 322 ANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSII-GSFWPYLIILVLLSFFSALY 398
Cdd:PRK12667 367 SGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLeSGFYLPALVLLIASAISLVG 444
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
118-381 |
1.67e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 69.37 E-value: 1.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 118 VFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLFSSWIMNTGSFYLMMTVAFLV 197
Cdd:PRK08667 138 FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 198 KMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVfpLMLKVAVKLNWVFLVISL--MGGLLVSFICMNQVDMK 275
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLK 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 276 SLIAYSSVAHMSMV---IG--------GLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFM 344
Cdd:PRK08667 296 GLLAYSSIENIGIIlmgIGlyvifgvyGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLM 375
|
250 260 270
....*....|....*....|....*....|....*..
gi 306960099 345 PSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSF 381
Cdd:PRK08667 376 PYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSF 412
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
189-398 |
1.93e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 68.99 E-value: 1.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLK-----VAVKLNWVFLVISLMGGLL 263
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKanfvfTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 264 VSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLAN-ISYeRSGSRSLMMNRGLLS 342
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGsISY-HFGTTKLEDCLNLWK 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 306960099 343 FMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGS-FWPYLIILVLLSFFSALY 398
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSnAWIGLVVLLVGSGLSVIY 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
184-396 |
5.52e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.47 E-value: 5.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 184 TGSFYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLK--VAVKLNWVFLVISLMGG 261
Cdd:PRK08676 205 LGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQsgAAEQFSNVLIGLGIFSI 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 262 LLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLL 341
Cdd:PRK08676 285 AVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVF 364
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 306960099 342 SFMPSLSLWWFLLSVGNMAAPPSMNLMGEIFLLNSiIGSFWPYLIILVLLSFFSA 396
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQ-LGGISVWLVLAVLLLLLLA 418
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
187-319 |
1.24e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 57.31 E-value: 1.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 187 FYLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAV-----------KLNWVFLV 255
Cdd:PRK08668 198 VFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLFNYILAW 277
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 306960099 256 ISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLF 319
Cdd:PRK08668 278 LGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-357 |
6.94e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 54.57 E-value: 6.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 193 VAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNwVFLVISLmggLLVSFICMNQV 272
Cdd:PRK07234 192 LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVR-IFGVGTA---LLGVLFALLEK 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 273 DMKSLIAYSSVAHMSMVIGGLMSlnywgwlgALVLMLGHGLCSSGLFCLANISYERSGS--RSLMMNRGLLSF--MPSLS 348
Cdd:PRK07234 268 DLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTelISQMLGIGKWIPltMASFS 339
|
....*....
gi 306960099 349 LWWFLLSVG 357
Cdd:PRK07234 340 IAGFPLLAG 348
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-369 |
7.05e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 54.59 E-value: 7.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 188 YLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMR----VFPlmlkvAVKLNWVFLVISLMGGLL 263
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRthtlLFP-----GGGLDTLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 264 VSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSF 343
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKA 366
|
170 180
....*....|....*....|....*.
gi 306960099 344 MPSLSLWWFLlsvgnmaapPSMNLMG 369
Cdd:PRK12665 367 SPLLAVLFFV---------PALNLGG 383
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
179-365 |
1.47e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.89 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 179 SWIMNTGsfyLMMTVAFLV------KMPMYLVHLWLPKAHVEA-PISgSMILAGILLKLGGYGIMRVFPLMLKVAVkLNW 251
Cdd:PRK12650 199 VWAEKPG---LTTVVAVLIavaaftKSAQFPFHFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNW 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 252 VFLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGS 331
Cdd:PRK12650 274 LLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGT 353
|
170 180 190
....*....|....*....|....*....|....
gi 306960099 332 RSLMMNRGLLSFMPsLSLWWFLLSVGNMAAPPSM 365
Cdd:PRK12650 354 RDIRRLGSLWRRMP-FTFVSVTIAALSMAAVPPL 386
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-400 |
6.18e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.49 E-value: 6.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 193 VAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVklNWVFLVISLMGGLLVSFICMNQV 272
Cdd:PRK07691 217 FVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDT--SFTHYLILILALLTIIFGVIGAV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 273 ---DMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSl 349
Cdd:PRK07691 295 ayfDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG- 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 306960099 350 WWFLLSVGNMAA-PPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYSI 400
Cdd:PRK07691 374 WMFFIAALSLAGiPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
117-402 |
6.84e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 51.64 E-value: 6.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 117 YVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIPLFSSWIMNTGSFYLMMTVAFL 196
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 197 V-----KMPMYLVHLWLPKAHVEAPISGSMILagILLKLGG-YGIMRVFPLMLKVAVKLNWVFLVISLMGGLLVSF---I 267
Cdd:PRK08376 227 IaglamKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVGWVIIILGCLTMFVgvaM 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 268 CMNQVDMKSLIAYSSVAH---------MSMVIGGLMSLNYWGWL---GALVLMLGHGLCSSGLFCLANISYERSGSRSLM 335
Cdd:PRK08376 305 AVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTRNLN 384
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 306960099 336 MNRGLLSFMPsLSLWWFLLSVGNMAAPPSMN------LMGE-IFLLNSIIGSFWPYLIILVLLSFFSALYSIYL 402
Cdd:PRK08376 385 ELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYEsSALFNPILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
189-405 |
9.41e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.10 E-value: 9.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPMYLVHlWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKV-AVKLNWVFLVISLMGGLLVSFI 267
Cdd:PRK12663 211 LLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQeRELLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 268 CMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSL 347
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLF 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 306960099 348 SLWWFLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLLSFFSALYS---IYLYSY 405
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSlfrIFFLAY 430
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
188-366 |
1.22e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 51.04 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 188 YLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVkLNW--VFLVISLMGGLLVS 265
Cdd:PRK06521 213 FLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPG-WWWgvLVLALGAISAVLGV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 266 FICMNQVDMKSLIAYSSVAHM---SMVIG--------GLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSL 334
Cdd:PRK06521 292 LYALAEHDLKRLLAYSTIENIgiiFVGLGlamvfiayGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDM 371
|
170 180 190
....*....|....*....|....*....|..
gi 306960099 335 MMNRGLLSFMPSLSlWWFLLSVGNMAAPPSMN 366
Cdd:PRK06521 372 EKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
195-414 |
3.48e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 49.38 E-value: 3.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 195 FLVKMPMYLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVIsLMGGLLVSF---ICMNQ 271
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVI-IMATLTVFFaelSALRQ 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 272 VDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWW 351
Cdd:PRK08377 295 KNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALAL 374
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 306960099 352 FLLSVGNMAAPPSMNLMGEIFLLNSIIGSFWPYLIILVLlsfFSALYSIYLYSYSQHGVFYSG 414
Cdd:PRK08377 375 TIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL---GASVVEAVYYFRLIHTMWFKG 434
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
188-391 |
1.47e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 47.28 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 188 YLMMTVAFLVKMPMYLVHLWLPKAhVEAPISGSMIL-AGILLKLGGYGIMRVFPLMLKVAVKLNWVFLVISLMGGLLVSF 266
Cdd:PRK06525 210 FLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 267 ICMNQVDMKSLIAYSSVAHMS-MVIGGLMSL--NYWGWLGALVLMLGHGLCSSGLFCLAN-ISYErSGSRSLMMNRGLLS 342
Cdd:PRK06525 289 MYLPQQDMKRLLAYSTITQLGyMFFGLSLAIlgSRLALEGSIAYIFNHAFAKSLFFLVAGaLSYS-CGTRLLPRLRGVLK 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 306960099 343 FMPSLSLWWFLLSVGNMAAPPsMNLM---GEIFLLNSIIGSFWPYLIILVLL 391
Cdd:PRK06525 368 KLPLVGVGFCVAALAITGVPP-FNGFfskFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-398 |
1.42e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 44.04 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 60 TASYWLIILTF-WICGLMMVASSKVFQGGMHLKYFLLVVTTLTVMLYCSFSSLSLISFYVFFEASLIPTLFLIlGWGYQP 138
Cdd:PRK06589 84 LGLIFLLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNN 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 139 ERIQAGV-YLMFYTLLASLPLLLGILLVGMHSGGLMIPLFSSWIMNTGSFYLMMTVAFLVKMPMYLVHLWLPKAHVEAPI 217
Cdd:PRK06589 163 ISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYP 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 218 SGSMILAGILLKLGGYGIMRV------FPLMLKVAVKLNWVfLVISLMGGLLVSFICMNQVDMKSLIAYSSVAHMSMVIG 291
Cdd:PRK06589 243 VSALLHAVIVVKTGLFCIYKIllyifgLSYLQRIFAEFNWL-IFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALL 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 292 GLMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLSLWWFLLSVGNMAAPPSMNLMGEI 371
Cdd:PRK06589 322 SAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKF 401
|
330 340 350
....*....|....*....|....*....|..
gi 306960099 372 FLLNSIIGSFWPYLIILVLL-----SFFSALY 398
Cdd:PRK06589 402 LILLAASEQNQPWLSIIVMLvviasSILSALY 433
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-106 |
1.84e-04 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 40.59 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 1 MLSVLFGVCGLILVSVVDARVK---TCWLVVNMIFIGSLMMLMKTSMFMgvYSLNGSVMGCDTASYWLIILTFWICGLMM 77
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwtTSTLYSLLLALLSLLLLNNPSNFS--WSNLSYFLGIDSLSYPLIILSCWLLPLMI 78
|
90 100 110
....*....|....*....|....*....|.
gi 306960099 78 VASSKVFQ--GGMHLKYFLLVVTTLTVMLYC 106
Cdd:pfam01059 79 LASQKHLKsePNNRQRTFIFLLILLQLFLIL 109
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
204-366 |
3.37e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 204 VHLWLPKAHVEAPISGSMILAGILLKLGGYGIMrVFPLMLKVAvKLNWVFLVISLmgGLLVSFI----CMNQVDMKSLIA 279
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGIL-TLSLLGGNA-PLWWGVALLVL--GMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 280 YSSVAHMSMVIGGL------MSLNY-----WGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPSLS 348
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgIALEQpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 306960099 349 LwWFLLSVGNMAAPPSMN 366
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
189-398 |
5.25e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 42.41 E-value: 5.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILlKLGGYGI-MRVF-PLMLKVAVKLNWVFLVISLMGGLLVSF 266
Cdd:COG1007 207 VLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLvEAFPGLAADWQLLLAVLAVLSMTVGNL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 267 ICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLF-CLANISYERSGSRSLMMNRGLLSFMP 345
Cdd:COG1007 286 AALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSP 365
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 306960099 346 SLSLwWFLLSVGNMA-APPSMNLMGEIFLLNSIIGS-FWPYLIILVLLSFFSALY 398
Cdd:COG1007 366 LLAL-AMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAgLYWLAVIAVLNSVISAYY 419
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
189-402 |
6.11e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.43 E-value: 6.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPMYLVHLWLPKAhVEAPISGSMIL-AGILLKLGGYGIMRVFPLmLKVAVKLNWVFLVISLMGGLLVSFI 267
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPL-LGLSNMYIYIVTFVGLITMLFGSIT 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 268 CMNQVDMKSLIAYSSVAH----MSMV-IGGLMSLNYWGWL---------GALVLMLGHGLCSSGLFCLANISYERSGSRS 333
Cdd:PRK12646 292 ALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHEAGTRD 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 334 LMMNRGLLSFMPSLSLwWFLLSVGNMAAPPSMN--LMGEIFLLNSIIGSFWP---------YLIILVLLSFFSALYSIYL 402
Cdd:PRK12646 372 IRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgfLSKEMFLDALTQTGQLSqfslismiiIVFIGVIASIFTFTYALYM 450
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
205-403 |
7.09e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 42.06 E-value: 7.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 205 HLWLPKAhVEAPISGS-------MILAGILLklggygIMRVFPLMLKVAvklnWVFLVISLMGG---LLVSFICMNQVDM 274
Cdd:COG1009 231 HFWLPDA-MEGPTPVSallhaatMVKAGVYL------LARLSPLFALSP----VWLTVVAIIGAitaLFAALIALAQTDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 275 KSLIAYSSVAHMSMVIgglMSLNYWGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGLLSFMPsLSLWWFLL 354
Cdd:COG1009 300 KRVLAYSTVSQLGYMF---LALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMP-ITAITFLI 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 306960099 355 SVGNMAA-PPsmnLMG-----EIF--LLNSIIGSFWPYlIILVLLSFFSALYSIYLY 403
Cdd:COG1009 376 GALSLAGiPP---FAGffskeAILeaALEAGGLGPLLL-AVALLGAFLTAFYSFRLF 428
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
189-283 |
1.26e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.31 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPM--YLVHLWLPKAHVEAPISGSMILAGILLKLGGYGIMRVfpLMLKVAVKLNWVFLVISLMGGL---- 262
Cdd:PRK06459 162 ILASFGFIIKMGMmpFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKM--TILTQTIPIGYFGLTILAIGAFsilf 239
|
90 100
....*....|....*....|...
gi 306960099 263 --LVSFICMNqvdMKSLIAYSSV 283
Cdd:PRK06459 240 gaLYAYVSEN---VKGLLAFSTI 259
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
188-300 |
2.09e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 40.61 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 188 YLMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAgILLKLGGYgimrVFPLMLKVAVKLNWVFLVISLMGGllvSFI 267
Cdd:MTH00198 302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVY----ILLTSLVITSKLLLSVAIISLVVG---AFG 373
|
90 100 110
....*....|....*....|....*....|...
gi 306960099 268 CMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWG 300
Cdd:MTH00198 374 ALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES 406
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
189-319 |
2.43e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 40.19 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAGILlKLGGYGI-MRVFpLMLKVAVKLNW--VFLVISLMGGLLVS 265
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLL-VVAFGGLSEDWqqVLAIIAIASMLVGN 285
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 306960099 266 FICMNQVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLF 319
Cdd:PRK05777 286 LAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
117-402 |
3.11e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.20 E-value: 3.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 117 YVFFEASLIPTLFLILGWGYQPERIQAGVYLMFYTLLASLPLLLGILLVGMHSGGLMIP--LFSSWIMNT---GSFYLMM 191
Cdd:PRK12649 137 FIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIAtiLQDSELIENikgHPLFLIT 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 192 TVAFLV----KMPMYLVHLWLPKAhVEAPISGSMIL-AGILLKLGGYGIMRVFPLMLKVAVklnWVFLV--ISLMGGLLV 264
Cdd:PRK12649 217 LILIFIgaaaKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFSGTEA---WFILVsgTGMITMVLA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 265 SFICMNQVDMKSLIAYSSVAHMS--MVIGGLMSLNY--WGWLGALVLMLGHGLCSSGLFCLANISYERSGSRSLMMNRGL 340
Cdd:PRK12649 293 GFLAFRQTDIKAILAYSTISQLAylMTMYGYTTYHEpgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGL 372
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 306960099 341 LSFMPsLSLWWFLLSVGNMAAPPSMN--LMGEIFLLNSI-----IGSFWPYLI--ILVLLSFFSALYSIYL 402
Cdd:PRK12649 373 RKEMP-ITFIVASIAALAMAGIPPLNgfLSKEMFYETSVemgalIGGPFTIIIpaVAVLGGVFTFAYSIKL 442
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
189-313 |
5.79e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.91 E-value: 5.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPMYLVHLWLPKAhVEAPISGSMILAGILLKLGGYGIMRVFPLmLKVAVKLNWVFLVISLMGGLLVSFIC 268
Cdd:PRK08168 204 LLLVLAVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFAPL-LEQAPPARWLLVLVGLATAVLAGLVM 281
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 306960099 269 MNQVDMKSLIAYSSVAHMsmvigGLMSLNYWGWLGALVL--MLGHGL 313
Cdd:PRK08168 282 LTRISIKVRLAWSTVAQM-----GFMLLECGLGLYELALlhLVAHSL 323
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
189-322 |
6.86e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 38.68 E-value: 6.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960099 189 LMMTVAFLVKMPMYLVHLWLPKAHVEAPISGSMILAgILLKLGGYGIMRVFPLMLKVAVKL------NWVF---LVISLM 259
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEAGAsagfgqDWLLpggLATLAF 292
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 306960099 260 G--GLLVSficmnqVDMKSLIAYSSVAHMSMVIGGLMSLNYWGWLGALVLMLGHGLCSSGLFCLA 322
Cdd:PRK12666 293 GaiGVLAA------QRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| |
