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Conserved domains on  [gi|306960100|ref|YP_003875517|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Ellipes minuta]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-90 1.46e-14

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 62.86  E-value: 1.46e-14
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFLMFMSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSS 90
Cdd:MTH00162 11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-90 1.46e-14

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 62.86  E-value: 1.46e-14
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFLMFMSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSS 90
Cdd:MTH00162 11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
12-96 1.07e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 37.54  E-value: 1.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100  12 FLIGVYIFSSkRKHLLLMLLSLEFIVLSLFLMF--MSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYS 89
Cdd:pfam00420 10 FLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALvlFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDVD 88


                 ....*..
gi 306960100  90 SLSLVEC 96
Cdd:pfam00420 89 SLNLLKG 95
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-90 1.46e-14

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 62.86  E-value: 1.46e-14
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFLMFMSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSS 90
Cdd:MTH00162 11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 12-96 3.62e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 54.21  E-value: 3.62e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFLMFMSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSSL 91
Cdd:MTH00188 13 VVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSL 92


                ....*
gi 306960100 92 SLVEC 96
Cdd:MTH00188 93 NLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 12-96 2.30e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 49.84  E-value: 2.30e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFLMFMSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSSL 91
Cdd:MTH00149 13 FLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYVSSL 92


                ....*
gi 306960100 92 SLVEC 96
Cdd:MTH00149 93 SSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-96 1.74e-08

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 47.44  E-value: 1.74e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFLMF-MSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSS 90
Cdd:MTH00013 12 PFISMFNLSLQRKHLLMSLLSLEAMILSLALFIpLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLKS 91


                ....*.
gi 306960100 91 LSLVEC 96
Cdd:MTH00013 92 LTSNKC 97
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 35-96 4.03e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 41.49  E-value: 4.03e-06
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 306960100 35 FIVLSLFLMFMSMMEMIQAEIyyviMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSSLSLVEC 96
Cdd:MTH00126 41 FIALSLWALQLESTSFSAAPM----LLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 12-96 8.29e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 40.60  E-value: 8.29e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFLM---FMSMMEMIQAEIYYVIMfFVFSVCEGSLGLSVLVSMVRSYGNDYY 88
Cdd:MTH00125 12 FMLSLLGLSFHRTHLMSALLCLESMMLSLFIMlslWPITTQTPSFTPMPIIL-LTFSACEAGTGLALLVATTRTHGSDHL 90


                ....*...
gi 306960100 89 SSLSLVEC 96
Cdd:MTH00125 91 KNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 13-96 6.15e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 38.37  E-value: 6.15e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100 13 LIGVYIFsskRKHLLLMLLSLEFIVLSLFLMFMSMMEMIQAEIYYV--IMFFVFSVCEGSLGLSVLVSMVRSYGNDYYSS 90
Cdd:MTH00107 16 LLGLLMY---RSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMmpIILLVFAACEAAVGLALLVMVSNTYGTDYVQN 92


                ....*.
gi 306960100 91 LSLVEC 96
Cdd:MTH00107 93 LNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
12-96 1.07e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 37.54  E-value: 1.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100  12 FLIGVYIFSSkRKHLLLMLLSLEFIVLSLFLMF--MSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYS 89
Cdd:pfam00420 10 FLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALvlFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDVD 88


                 ....*..
gi 306960100  90 SLSLVEC 96
Cdd:pfam00420 89 SLNLLKG 95
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 12-96 1.31e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 37.28  E-value: 1.31e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLFL---MFMSMMEMIQAEIYYVIMFfVFSVCEGSLGLSVLVSMVRSYGNDYY 88
Cdd:MTH00067 12 FLLGLMGLAFHRTHLLSALLCLEGMMLSLFIalsLWSTQFESLSYFSLPMFML-TFSACEASTGLALMVATTRTHGTDHL 90


                ....*...
gi 306960100 89 SSLSLVEC 96
Cdd:MTH00067 91 KNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 12-93 1.20e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 34.92  E-value: 1.20e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960100 12 FLIGVYIFSSKRKHLLLMLLSLEFIVLSLF--LMFMSMMEMIQAEIYYVIMFFVFSVCEGSLGLSVLVSMVRSYGNDYYS 89
Cdd:MTH00181  9 FILLLLGLSLYKTHLLSLLLCLEGMMLFLFllLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTHGSDHLL 88


                ....
gi 306960100 90 SLSL 93
Cdd:MTH00181 89 KFNL 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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