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Conserved domains on  [gi|317097470|ref|YP_004123689|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Locusta migratoria manilensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.22e-143

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 406.85  E-value: 1.22e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   5 LFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  85 LMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 165 SFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLF 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 317097470 245 SLIFLGGDFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMF 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.22e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 406.85  E-value: 1.22e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   5 LFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  85 LMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 165 SFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLF 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 317097470 245 SLIFLGGDFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMF 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.46e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 284.75  E-value: 1.46e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLLIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   93 VIFPYLTYM--CSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  171 FMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFSLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 317097470  251 G------DFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 3.76e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.00  E-value: 3.76e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   4 DLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  84 NLMISLLIWVIFPYLTYMC--SFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 162 LIGSFNMLDFMNFQ-LYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 241 SMLFSLIFLGG--------DFYS----FYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLnFLFFFIGLSV 308
Cdd:COG1005  247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                 ...
gi 317097470 309 MFF 311
Cdd:COG1005  326 LLF 328
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-310 1.58e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 159.87  E-value: 1.58e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLLIW 92
Cdd:NF040610  17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  93 VIFP----------YLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:NF040610  97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 163 IGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSM 242
Cdd:NF040610 177 AGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSF 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 243 LFSLIFLGG-------------DFYS--FYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLS 307
Cdd:NF040610 257 LVVLLFLGGwnlpgfvtdipvlGIILptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALG 336


                 ...
gi 317097470 308 VMF 310
Cdd:NF040610 337 LYL 339
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.22e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 406.85  E-value: 1.22e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   5 LFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  85 LMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 165 SFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLF 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 317097470 245 SLIFLGGDFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMF 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-307 2.47e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 357.81  E-value: 2.47e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   7 MFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLM 86
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  87 ISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 167 NMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFSL 246
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 317097470 247 IFLGGDFYSFYFFF--KLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLS 307
Cdd:MTH00225 242 LFFGGFFVTIDLFLilKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-307 1.55e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 335.69  E-value: 1.55e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   6 FMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 85
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  86 MISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 166 FNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFS 245
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 317097470 246 LIFLGGDF-----YSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLS 307
Cdd:MTH00143 241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 2-313 3.92e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 307.32  E-value: 3.92e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   2 MYDLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 81
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  82 VFNLMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 162 LIGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMS 241
Cdd:MTH00071 161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 317097470 242 MLFSLIFLGGDFYSFY-------FFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMFFSI 313
Cdd:MTH00071 241 TLSTILFLGSTYNHLQpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 9-313 6.05e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 306.45  E-value: 6.05e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   9 VLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMIS 88
Cdd:MTH00218   5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  89 LLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNM 168
Cdd:MTH00218  85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 169 LDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFSLIF 248
Cdd:MTH00218 165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 317097470 249 LGGDFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMFFSI 313
Cdd:MTH00218 245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-313 1.41e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 305.78  E-value: 1.41e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   7 MFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLM 86
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  87 ISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 167 NMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFSL 246
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 317097470 247 IFLGG-------DFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMFFSI 313
Cdd:MTH00104 241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 2-313 5.64e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 301.81  E-value: 5.64e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   2 MYDLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 81
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  82 VFNLMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 162 LIGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMS 241
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 317097470 242 MLFSLIFL-------GGDFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMFFSI 313
Cdd:MTH00111 241 TLTTILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-306 1.17e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 297.81  E-value: 1.17e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   5 LFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 84
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  85 LMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 165 SFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLF 244
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 317097470 245 SLIFLGGDfYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGL 306
Cdd:MTH00195 241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAI 301
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-314 4.34e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 291.88  E-value: 4.34e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   3 YDLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPV 82
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  83 FNLMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 163 IGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSM 242
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 243 LFSLIFLGGDFYSFYFF--------FKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMFFSII 314
Cdd:MTH00040 241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-313 8.66e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 288.81  E-value: 8.66e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   1 MMYDLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  81 PVFNLMISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 161 ILIGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 241 SMLFSLIFLGGDFY-------SFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMFFSI 313
Cdd:MTH00134 241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.46e-95

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 284.75  E-value: 1.46e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLLIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   93 VIFPYLTYM--CSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  171 FMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFSLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 317097470  251 G------DFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFF 302
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-310 2.55e-90

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 271.65  E-value: 2.55e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   8 FVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMI 87
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  88 SLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFN 167
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 168 MLDFMNFQlYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFSLI 247
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 317097470 248 FLGgdFYSFYFFFKLSL------VSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMF 310
Cdd:MTH00010 244 FTS--FIPSIFISDLMLilktvfLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 3.76e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.00  E-value: 3.76e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   4 DLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  84 NLMISLLIWVIFPYLTYMC--SFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 162 LIGSFNMLDFMNFQ-LYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 241 SMLFSLIFLGG--------DFYS----FYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLnFLFFFIGLSV 308
Cdd:COG1005  247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                 ...
gi 317097470 309 MFF 311
Cdd:COG1005  326 LLF 328
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 1.37e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 265.45  E-value: 1.37e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   1 MMYDLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  81 PVFNLMISLLIWVIFPYL--TYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 159 LIILIGSFNMLDFMNFQL-YCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 317097470 238 IFMSMLFSLIFLGG--------DFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGL 306
Cdd:MTH00216 241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-313 1.18e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 260.43  E-value: 1.18e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   5 LFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 84
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  85 LMISLLIWVIFPYLT--YMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054  81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 163 IGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSM 242
Cdd:MTH00054 161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 243 LFSLIFLGGDFYSF----------YFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSVMFFS 312
Cdd:MTH00054 241 FGVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNA 320


                 .
gi 317097470 313 I 313
Cdd:MTH00054 321 L 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 2.47e-83

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 254.35  E-value: 2.47e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   5 LFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 84
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  85 LMISLLIWVIFPYLTY--MCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076  89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 163 IGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSM 242
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 317097470 243 LFSLIFLGG----------DFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSL 297
Cdd:PRK06076 249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-310 3.25e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 229.13  E-value: 3.25e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   2 MYDLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 81
Cdd:MTH00029   3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  82 VFNLMISLLIWVI--FPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00029  83 IISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 160 IILIGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIF 239
Cdd:MTH00029 163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 240 MSMLFSLIFLGG-----------------------DFYSFYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLS 296
Cdd:MTH00029 243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                        330
                 ....*....|....
gi 317097470 297 LNFLFFFIGLSVMF 310
Cdd:MTH00029 323 LGLVILTAGILIGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 1.19e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 194.73  E-value: 1.19e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  11 NFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLL 90
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  91 IWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLD 170
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 171 FMNFQLYCWFivfsfplaLSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLFSLIFLG 250
Cdd:MTH00090 161 SFSLSLFVIY--------LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 317097470 251 GDFYSFYFFFklslvsFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLSV 308
Cdd:MTH00090 233 FSFLMLFLIF------SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-304 1.19e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 166.64  E-value: 1.19e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   6 FMFVLNFLLLIICVLIsVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 85
Cdd:MTH00058   2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  86 MISLLIWVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00058  81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 166 FNMLDFMnfqLYCWFIVFSFPLALSFFGSC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSMLF 244
Cdd:MTH00058 161 YSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 245 SLIFLGGDFYSFYFFFKLslvsFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFI 304
Cdd:MTH00058 238 SVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-310 1.58e-46

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 159.87  E-value: 1.58e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  13 LLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLLIW 92
Cdd:NF040610  17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  93 VIFP----------YLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:NF040610  97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 163 IGSFNMLDFMNFQLYCWFIVFSFPLALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFMSM 242
Cdd:NF040610 177 AGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSF 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 243 LFSLIFLGG-------------DFYS--FYFFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFIGLS 307
Cdd:NF040610 257 LVVLLFLGGwnlpgfvtdipvlGIILptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALG 336


                 ...
gi 317097470 308 VMF 310
Cdd:NF040610 337 LYL 339
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-297 4.86e-32

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 122.37  E-value: 4.86e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   3 YDLFMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP- 81
Cdd:CHL00032  24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPs 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  82 --VFNLMISLLIwVIFPYLTYMCSFPYGFLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:CHL00032 104 iaVISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 160 IILIGSFNMLDFMNFQ----LYCW--------FIVFsfplalsfFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFT 227
Cdd:CHL00032 183 SLLSNSLSTVDIVEAQskygFWGWnlwrqpigFIVF--------LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFG 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 228 LIFLAEYSSIIFMSMLFSLIFLGG-----DFYSFYFFFKLSLV----------------SFFFVWV----RGTLPRFRYD 282
Cdd:CHL00032 255 LFYVASYLNLLVSSLFVTVLYLGGwnlsiPYIFIPELFEINKTggvfgttigifitlakTYLFLFIsittRWTLPRLRMD 334

                        330
                 ....*....|....*
gi 317097470 283 KLMYLAWKSYLPLSL 297
Cdd:CHL00032 335 QLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 1.18e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.33  E-value: 1.18e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470   6 FMFVLNFLLLIICVLISVAFLTLMERKVLGYIQIRKGPnkvgflGIPQPFSDAIKLICKEQPIPfMSNYFLYYFSPVFNL 85
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470  86 MISLLIWVIFPYLTYMCSFPYG--FLFFLCCTSLSVYTLMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG0650   74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 164 GSFNMLDFMNFQLYCWFIVFSFPL---ALSFFGSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYSSIIFM 240
Cdd:COG0650  154 GSTSLSDIVAYQAAHGPLLLSPSLllaAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 317097470 241 SMLFSLIFLGGDFYSFY------FFFKLSLVSFFFVWVRGTLPRFRYDKLMYLAWKSYLPLSLNFLFFFI 304
Cdd:COG0650  234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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