|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-556 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 593.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 2 LNNFYISSLFFLIGGLFFFIMSLFFLGQDMSFLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYG 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 82 DVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 162 FGSWNYIYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 242 KMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLF 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 322 DNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 402 IKPFSFNTLFNFN-VGRDMNVGMFFLLLFTVLGGSLLSWLIFPVPFCVYLPFSLKMLTMVVVLLGLYFGYLLSLLYFNMK 480
Cdd:MTH00165 401 SGDFNLKSLNNLSdESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 403531479 481 NFC-NPFFINDFFGLMWFMPIISTKLISYNVLVIGGLYTSFMDYGWLEYYGAQGIYNFFMYFIKQYLNLFDYNFKTY 556
Cdd:MTH00165 481 LKSlKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIY 557
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
7-541 |
1.74e-168 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 490.12 E-value: 1.74e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 7 ISSLFFLIGGLFFFIMSLFFLGQDMSFLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFN 86
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 87 RFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWMLNFGSWN 166
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 167 YIYYYDYFFssynYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NS 245
Cdd:MTH00151 166 ILSMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGfSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 246 ILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQD 325
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 326 IRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPF 405
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 406 SFNTLFNFNV-GRDMNVGMFFLLLFTVLGGSLLSWLIFPVPFCVYLPFSLKMLTMVVVLLGLYFGYLLSLLYFNMKNFcn 484
Cdd:MTH00151 402 KSSSLSSKSDeDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKM-- 479
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 403531479 485 pFFINDFFGLMWFMPIISTKLISYNVLVIGGLYTSFMDYGWLEYYGAQGIYNFFMYF 541
Cdd:MTH00151 480 -VKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSF 535
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
22-556 |
1.17e-162 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 475.29 E-value: 1.17e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 22 MSLFFLGQDMSFLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMF 101
Cdd:MTH00209 19 MFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNF 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 102 LIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWMLNFGSWNYIYYYDYFFSSynyS 181
Cdd:MTH00209 99 LIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIFYLNFNSNLG---S 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 182 VICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NSILLLVGCLTMLMSGI 260
Cdd:MTH00209 176 VISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFfSMSLLLLGSLTTLMASM 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 261 AANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTS 340
Cdd:MTH00209 256 SANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITS 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 341 ACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVGRDMN 420
Cdd:MTH00209 336 ICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLN 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 421 V-GMFFLLLFTVLGGSLLSWLIFPVPFCVYLPFSLKMLTMVVVLLGLYfgyllsLLYFNMKNFCNPFF---INDFFGLMW 496
Cdd:MTH00209 416 LkPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVL------LMYMVLKKNFFLIKgykVNYFLSQMW 489
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 497 FMPIISTKLISYNVLVIGGLYTSFMDYGWLEYYGAQGIYNFFMYFIKQYLNLFDYNFKTY 556
Cdd:MTH00209 490 FLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLF 549
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-538 |
2.45e-155 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 456.92 E-value: 2.45e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 1 MLNNFYISSLFFLIGGLFFFIMSLFFLGQDMSFLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMY 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 81 GDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 161 NFGSWNYIYYYDYFFssynYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF- 239
Cdd:MTH00207 163 NQGHWSITNMWQTDM----NNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSs 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 240 FSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHS 319
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 320 LFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYY 399
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 400 SLIKP-FSFNTLFNFNVGRDMNVGMFFLLLFTVLGGSLLSWLIFPVPFCVYLPFSLKMLTMVVVLLGLYFGYLLSLLYFN 478
Cdd:MTH00207 399 VLWSPnSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNIT 478
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 403531479 479 MKNFCNPFFINDFFG-LMWFMPIISTKLISYNVLVIGGLYTSFMDYGWLEYYGAQGIYNFF 538
Cdd:MTH00207 479 KTPLLINNPLSHFAScLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMF 539
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
22-556 |
2.10e-110 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 342.32 E-value: 2.10e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 22 MSLFFLGQDMSFLI-EWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMM 100
Cdd:MTH00211 45 PLLIFLDQGLETILtNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFML 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 101 FLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTAL-SNRVGDVLILLSISWML-NFGSWNyiyYYDYFFSSY 178
Cdd:MTH00211 125 ILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWE---ISQLFILNL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 179 NYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NSILLLVGCLTMLM 257
Cdd:MTH00211 202 DLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLiLGAVLLLGALTMLF 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 258 SGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMP 337
Cdd:MTH00211 282 GALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLP 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 338 YTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVGR 417
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENY 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 418 DMNVGMFFLL-LFTVLGGSLLSWLIFPVPF-CVYLPFSLKMLTMVVvllgLYFGYLLSLLYFNMKNFCNPFFINDFFGLM 495
Cdd:MTH00211 442 KLLKNPLKRLaLGSILAGFIITSNLPPEKPeILSLPFLLKLMPLLV----TIVGLLLGLELVNLTHKQLKTSTLSFSNML 517
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 403531479 496 WFMPIISTKLISYNVLVIGG-LYTSFMDYGWLEYYGAQGIYNFFMYFIKQYLNLFDYNFKTY 556
Cdd:MTH00211 518 GYYPPIIHRLLPKLSLKWGQtLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSY 579
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-441 |
1.57e-92 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 295.91 E-value: 1.57e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 49 MAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:COG1009 74 FGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 129 YQNVKSVNAGLLTA-LSNRVGDVLILLSISWMLN-FGSWNY---IYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAW 203
Cdd:COG1009 154 WYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGL 282
Cdd:COG1009 234 LPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGY 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 283 MMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSK 362
Cdd:COG1009 314 MFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSK 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 363 DLILE-LSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNF-NVGRDMNVGMFFLLLFTVLGGSLLSWL 440
Cdd:COG1009 393 EAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPhESPWLMTLPLVVLAVLSLVLGLLLPGL 472
|
.
gi 403531479 441 I 441
Cdd:COG1009 473 L 473
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
51-556 |
1.81e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 288.41 E-value: 1.81e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 51 IILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQ 130
Cdd:MTH00208 103 FIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWT 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 131 NVKSVNAGLLTA-LSNRVGDVLILLSISW-MLNFGSWNYIYYYDYFFSSYNYSVICLM-VMVAGMTKSAQIPFSAWLPAA 207
Cdd:MTH00208 183 TRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLNEILSLNNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAA 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 208 MAAPTPVSALVHSSTLVTAGVYLLIRFSPML-FFSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGI 286
Cdd:MTH00208 263 MEGPTPVSALLHSSTMVVAGVFLLIRTSPLIsNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 287 LGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLIL 366
Cdd:MTH00208 343 IGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLIL 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 367 ELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFN-VGRDMNVGMFFLLLFTVLGGSLLSWLIFPVP 445
Cdd:MTH00208 423 EAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISeENPNLTNPLLRLAIGTIISGWFFSNFVFNLP 502
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 446 FCVyLPFSLKMLTMVVVllGLYFGYLLSLLYFNMKNFCNPFFINDFFGLMWFMPIISTKLISYNVLVIGGLYTSFMDYGW 525
Cdd:MTH00208 503 PLT-LPLILKSLPLIVT--IIGAAFSFSFLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGW 579
|
490 500 510
....*....|....*....|....*....|.
gi 403531479 526 LEYYGAQGIYNFFMYFIKQYLNLFDYNFKTY 556
Cdd:MTH00208 580 SENIGPQGIGNTSSTLSKSYQLTQTGYIKQY 610
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
24-414 |
1.77e-88 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 285.13 E-value: 1.77e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 24 LFFLGQDM-SFLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFL 102
Cdd:MTH00004 52 TLFLNSGTeSITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLIL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 103 IISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRVGDVLILLSISWM-LNFGSWNyiyyYDYFFSSYNY 180
Cdd:MTH00004 132 ITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWE----IQQLFSPTQT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 181 SVICLM-VMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-MNSILLLVGCLTMLMS 258
Cdd:MTH00004 208 PTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQtALTICLCLGALTTLFA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 259 GIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPY 338
Cdd:MTH00004 288 ATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPI 367
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 403531479 339 TSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFN 414
Cdd:MTH00004 368 TSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPIN 443
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
49-397 |
3.57e-86 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 279.74 E-value: 3.57e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 49 MAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 129 YQNVKSVNAGLLTA-LSNRVGDVLILLSISWML-NFGSWNY--IYYYDYFFSSYNYS---VICLMVMVAGMTKSAQIPFS 201
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYdeVFAAAPQFFGLGWSaltLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 202 AWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNSILLLVGCL---TMLMSGIAANYEFDLKKIIALSTLS 278
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPL--FELSPEALLFVAIVgavTALFAAFIGLVQTDIKRVLAYSTMS 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 279 QLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSG 358
Cdd:PRK06590 316 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAG 395
|
330 340 350
....*....|....*....|....*....|....*....
gi 403531479 359 FYSKDLILElSSFGSINLIIYFLFFFSTGLTTMYSFRLL 397
Cdd:PRK06590 396 FFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
24-556 |
8.35e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 275.63 E-value: 8.35e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 24 LFFLGQDM-SFLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFL 102
Cdd:MTH00066 50 MIFINQGLeSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMIL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 103 IISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRVGDVLILLSISW-MLNFGSWNyiyYYDYFFSSYNY 180
Cdd:MTH00066 130 VTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAvLYNRVGDIGLILSMAWlAMNTNSWE---LQQIFLLNDNS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 181 SVICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMN-SILLLVGCLTMLMSG 259
Cdd:MTH00066 207 TLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTAlTICLCLGALTTLFTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 260 IAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYT 339
Cdd:MTH00066 287 ACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPIT 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 340 SACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTL--FNFNVGR 417
Cdd:MTH00066 367 TSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLspINENNPL 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 418 DMNvGMFFLLLFTVLGGSLLSWLIFPV-PFCVYLPFSLKMLTMVVVLLGLYFGYLLSLLYFNMKNFCNPFfinDFFGLMW 496
Cdd:MTH00066 447 IIN-PIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH---SFSNLLA 522
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 403531479 497 FMPIISTKLISYNVLVIGG-LYTSFMDYGWLEYYGAQGIYNFFMYFIKQYLNLFDYNFKTY 556
Cdd:MTH00066 523 FFPTIIHRLSPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTY 583
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
50-398 |
4.70e-83 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 271.08 E-value: 4.70e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 50 AIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLV-IY 128
Cdd:TIGR01974 78 GLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 129 YQNVKSVNAGLLTALSNRVGDVLILLSISWMLN-FGSWNY--IYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLP 205
Cdd:TIGR01974 158 YKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFS-KMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:TIGR01974 238 DAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSpTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 285 GILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDL 364
Cdd:TIGR01974 318 LALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDL 397
|
330 340 350
....*....|....*....|....*....|....*
gi 403531479 365 ILElSSFGSINLIIYFLF-FFSTGLTTMYSFRLLY 398
Cdd:TIGR01974 398 ILE-AAFASGTHSFLFVAgLIGAFLTAFYSFRLIF 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
22-539 |
4.77e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 268.26 E-value: 4.77e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 22 MSLFFLGQDMSfLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMF 101
Cdd:MTH00108 52 MMFIHSGQEMI-ISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLI 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 102 LIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTA-LSNRVGDVLILLSISW-MLNFGSWNyiyYYDYFFSSYN 179
Cdd:MTH00108 131 LVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWD---LQQIFMLNPN 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 180 YSVICLM-VMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-MNSILLLVGCLTMLM 257
Cdd:MTH00108 208 NSNLPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKtIQTLTLCLGAITTLF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 258 SGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMP 337
Cdd:MTH00108 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLP 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 338 YTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVGR 417
Cdd:MTH00108 368 FTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENN 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 418 DMNVG-MFFLLLFTVLGGSLLSWLIFPV-PFCVYLPFSLKMLTMVVVLLGLYFGYLLSLLYFNMKnFCNPFFINDFFGLM 495
Cdd:MTH00108 448 PLLINpIKRLLLGSIFAGFLISNNIPPTtIPQMTMPLYLKLTALAVTILGFILALELNLLTNNLK-FKYPSNTFKFSNML 526
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 403531479 496 WFMPIISTKLISYNVLVIG-GLYTSFMDYGWLEYYGAQGIYNFFM 539
Cdd:MTH00108 527 GYFPTIMHRLPPYMNLTMSqKLASMLLDLIWLEKILPKTISLIQM 571
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
54-538 |
4.89e-77 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 255.39 E-value: 4.89e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 54 DWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLV-IYYQNV 132
Cdd:MTH00020 79 DGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRI 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 133 KSVNAGLLTALSNRVGDVLILLSISWMLN-FGSWNY--IYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMA 209
Cdd:MTH00020 159 EANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAME 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 210 APTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSILL-LVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILG 288
Cdd:MTH00020 239 GPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACG 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 289 FGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILEL 368
Cdd:MTH00020 319 LSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILEL 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 369 SSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLI-KPFSFNTLFNFNVGRDMNV--GMFFLLLFTVLGGSLLSWLIFPVP 445
Cdd:MTH00020 399 AFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLsNTNLKKAVFFHLHEGDWNLllPLGILALGSIFVGYLAKEMIWSFQ 478
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 446 FCVYLPFSLKMLTMVVVLLGLYFGYLLSLLYFNMKNFCNPF-----FINDFFGLMWFMPIISTKLISYNVLVIGGLYT-S 519
Cdd:MTH00020 479 ITLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFsfigrNSYTFLGSAWQFNYILNYFLIKKIWKGGHLISyR 558
|
490
....*....|....*....
gi 403531479 520 FMDYGWLEYYGAQGIYNFF 538
Cdd:MTH00020 559 TIDKGVLELVGPKGISNFL 577
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
54-410 |
7.25e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 249.36 E-value: 7.25e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 54 DWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 134 SVNAGLLTA-LSNRVGDVLILLSISWML-NFGSWNyIYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAP 211
Cdd:MTH00137 167 DANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 212 TPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMN-SILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFG 290
Cdd:MTH00137 246 TPVSALLHSSTMVVAGIFLLIRLSPLMENNQTAlTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 291 YPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSS 370
Cdd:MTH00137 326 QPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALN 405
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 403531479 371 FGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTL 410
Cdd:MTH00137 406 TSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPL 445
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
54-548 |
1.08e-68 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 233.36 E-value: 1.08e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 54 DWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLV-IYYQNV 132
Cdd:MTH00210 79 DSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRI 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 133 KSVNAGLLTALSNRVGDVLILLSISWMLN-FGSWNYIYYYDYFFSSYNYS---VICLMVMVAGMTKSAQIPFSAWLPAAM 208
Cdd:MTH00210 159 KANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINKEsltIICLLLFIGAVGKSAQLGLHTWLPDAM 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 209 AAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSILL-LVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGIL 287
Cdd:MTH00210 239 EGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVC 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 288 GFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILE 367
Cdd:MTH00210 319 GISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILE 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 368 LSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVgRDMNVGMFFLLLFTVLGG---------SLLS 438
Cdd:MTH00210 399 LTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGV-HESSWNITFPLLLLAFGSifvgylgkeVVLS 477
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 439 WLIFPV--PFCVYLPFSLKMLTMVVVLLGLYFGYLLSLLYFNMKNFCNPFFINDFFGLMWFMPIISTKLISYNVLVIGGL 516
Cdd:MTH00210 478 NVIPPIvpNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHL 557
|
490 500 510
....*....|....*....|....*....|...
gi 403531479 517 YT-SFMDYGWLEYYGAQGIYNFFMYFIKQYLNL 548
Cdd:MTH00210 558 ITyRIIDRGLLEIIGPRGISKVLIKLTQKISNL 590
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
34-396 |
8.87e-65 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 223.75 E-value: 8.87e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 34 LIEWeiCSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILL 113
Cdd:PRK07376 72 LFEW--ASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 114 GWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRVGDVLILLSI---SWMLnfGSWNYIYYYDYFFSSYNYSVI------ 183
Cdd:PRK07376 150 FWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWAT--GSFDFDGIADRLSELVSSGAVsgwlal 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 184 --CLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-FFSKMNSILLLVGCLTMLMSGI 260
Cdd:PRK07376 228 llCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFeQFPAVMTVIAWTGAITAFLGAS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 261 AANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFD--------NQDIRYMGSL 332
Cdd:PRK07376 308 IALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGL 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 403531479 333 TLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELsSFGSiNLIIYFLFFFSTGLTTMYSFRL 396
Cdd:PRK07376 388 RKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGA-AFEA-NPALWFVGFLTAGMTAFYMFRM 449
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
34-498 |
1.08e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 209.77 E-value: 1.08e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 34 LIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILL 113
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 114 GWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWMLNFGswnyiyyYDYFFSSYNYSVICLMVMVAGMT 193
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 194 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIA 273
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 274 LSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGF 353
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 354 PFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVGrdMNVGMFFLLLFTVLG 433
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVL--MNFLSLMLVFFSVFF 414
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 403531479 434 GSLLSWLIFPVPFC-VYLPFSLKMLTMVVVLLGLYFGYLLSLLYFNMKNFCNPFFINDFFGLMWFM 498
Cdd:MTH00095 415 LWWLNFNLLNLPSLfLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLK 480
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
49-372 |
2.87e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 195.18 E-value: 2.87e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 49 MAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:MTH00032 74 IGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 129 YQNVKSVNAGLLTAL-SNRVGDVLILLSISWM------LNFGSWN------------YIYYYDYFFSSYNYSVICLMVMV 189
Cdd:MTH00032 154 WTTRIQANKAAIKAIvVNRVGDVGVILGMVLIyktigsLDFLTFNggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 190 AGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNSILLLV---GCLTMLMSGIAANYEF 266
Cdd:MTH00032 234 GCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPL--FEKAPLTLLIItifGALTAFFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 267 DLKKIIALSTLSQLGLMMGILGF-GYPLMSFFHLLTHALFKSLLFLCAGCYIHSL-FDNQDIRYMGSLTLFMPYTSACLN 344
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGLIHSIPFTYTMML 391
|
330 340
....*....|....*....|....*...
gi 403531479 345 IANLSLCGFPFLSGFYSKDLILELSSFG 372
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLILELTYSG 419
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-367 |
2.07e-49 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 184.09 E-value: 2.07e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 43 NSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 123 YCLVIyyQNVKSVNAGLLTALSNRVGDVLILL-------------SISWMLNFGSWNYIYYYDyffssynySVICLMVMV 189
Cdd:PRK12650 147 FFLIA--RSGSGGEAGSIRTLILTFFGGLTLLaavaiaatqtgttSLSGILHSDVWAEKPGLT--------TVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 190 AGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSILLL-VGCLTMLMSGIAANYEFDL 268
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIiVGMITALMGAVFAVQKTDL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 269 KKIIALSTLSQLGLMMGILGFGYPL---MSFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNI 345
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVTI 375
|
330 340
....*....|....*....|..
gi 403531479 346 ANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12650 376 AALSMAAVPPLFGFVSKEGMLT 397
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
53-399 |
2.83e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 170.71 E-value: 2.83e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 133 KSVNAGLLTALSNRVGDVLILLSISWM-LNFGSWNY--IYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMA 209
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMadLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 210 -APTPVSALVhSSTLVTAGVYLLIRFSPMLF----FSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMM 284
Cdd:COG0651 234 aAPSPVSALL-SGLLTKVGVYAILRVLTLLFgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 285 GILGFGYPLM---SFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYS 361
Cdd:COG0651 313 LGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
330 340 350
....*....|....*....|....*....|....*...
gi 403531479 362 KDLILElSSFGSINLIIYFLFFFSTGLTTMYSFRLLYY 399
Cdd:COG0651 392 KWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-385 |
1.01e-46 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 165.56 E-value: 1.01e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 105 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSVNAGLLTALSNRVGDVLILLSISWMLNFGSWNYI----YYYDYFFSSYN 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelsKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 180 YSVICLMVMVAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFS--KMNSILLLVGCLTML 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 257 MSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPL---MSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 403531479 334 LFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFS 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-405 |
7.97e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 169.33 E-value: 7.97e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK12647 62 LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHER 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 133 KSVNAGLLTALSNRVGDVLILL-------------SISWMLNFGSwnyiyyydYFFSSYNYSVICLMVMVAGMTKSAQIP 199
Cdd:PRK12647 142 EAARRAALQALLVTGGGGLALLaglillgnvtgtySLSELLASGD--------VIREHPLYLAILLLVLGGAFTKSAQFP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLS 278
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 279 QLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPF 355
Cdd:PRK12647 294 ALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 403531479 356 LSGFYSKDLILE-LSSFGSINLIIYFLFFFSTGLTTMYSFRLlyysLIKPF 405
Cdd:PRK12647 373 LFGFLAKELIYEaLLEAPLWSLILTVAAVLGNALMVAVAFLV----GIKPF 419
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
70-395 |
1.50e-43 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 165.45 E-value: 1.50e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 70 MVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVKSVNAGLLTALSNRVG 148
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 149 DVLILLSIS---WM---LNFGSWNYIYYYDYFFSSYNYS---VICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVH 219
Cdd:CHL00025 186 DFGLLLGILgfyWItgsFEFRDLFEIFNNLIYNNEVNLLfatLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIH 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 220 SSTLVTAGVYLLIRFSPM--LFFSKMNSIlLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFF 297
Cdd:CHL00025 266 AATMVAAGIFLVARLLPLfiVIPYIMNLI-SLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 298 HLLTHALFKSLLFLCAGCYIHSL--------FDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELS 369
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDS 424
|
330 340
....*....|....*....|....*.
gi 403531479 370 SFGSinLIIYFLFFFSTGLTTMYSFR 395
Cdd:CHL00025 425 WLYS--PIFAIIAWSTAGLTAFYMFR 448
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
24-397 |
4.97e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 158.50 E-value: 4.97e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 24 LFFLGQDMSFLIEWEICSFNSSMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLI 103
Cdd:MTH00063 14 FFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILV 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 104 ISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWMLNFGSwnyiyyydyffssyNYSVI 183
Cdd:MTH00063 94 LTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGS--------------GSFLC 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 184 CLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMNSILLLVGCLTMLMSGIAAN 263
Cdd:MTH00063 160 CLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 264 YEFDLKKIIALSTLSQLGLMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACL 343
Cdd:MTH00063 240 FFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYL 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 403531479 344 NIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYSFRLL 397
Cdd:MTH00063 320 FLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC 373
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
53-397 |
9.79e-42 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 160.69 E-value: 9.79e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYM-YGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIY-YQ 130
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 131 NVKSVNAGLLTALSNRVGDVLILLSISWMLNFGSWNYIYYYDYFFSSYNYS----VICLMVMVAGMTKSAQIPFSAWLPA 206
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHglfiPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 207 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMN-SILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMG 285
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYiYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 286 ILGFG--------------YPLMSF---FHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANL 348
Cdd:PRK12646 316 MVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHEA-GTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 403531479 349 SLCGFPFLSGFYSKDLIL-------ELSSFGSI-NLIIYFLFFFSTGLTTMYSFRLL 397
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLdaltqtgQLSQFSLIsMIIIVFIGVIASIFTFTYALYMV 451
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
53-367 |
3.11e-39 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 153.46 E-value: 3.11e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 131
Cdd:TIGR00940 73 MDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWhHR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 132 VKSVNAGLLTALSNRVGDVLILLSISWM-LNFGSWNYIYYYDYFFSSYN---YSVICLMVMVAGMTKSAQIPFSAWLPAA 207
Cdd:TIGR00940 153 AHSRYGAQKSLTITVFGGLAMLGGLILLgKITGSFSIDAVIASADAIRNsplFGTAMVLVLLGAFTKSAQFPFHIWLPDA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 208 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK-MNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGI 286
Cdd:TIGR00940 233 MEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEaWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 287 LGFGYPLMSF----------------FHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSL 350
Cdd:TIGR00940 313 LGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHET-GTRDIRKLGGLFHIMPITFTLAMIASAAM 391
|
330
....*....|....*..
gi 403531479 351 CGFPFLSGFYSKDLILE 367
Cdd:TIGR00940 392 AGVPPFNGFLSKEMFFA 408
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-398 |
9.74e-39 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 152.27 E-value: 9.74e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK12648 74 LDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 133 KSVNAGLLTALSnrV---------GDVLILLSI--SWMLN--FGSWNYIYYYDYffssynYSVICLMVMVAGMTKSAQIP 199
Cdd:PRK12648 154 ADARRGARMALT--VtgagglallAGVLLLGHIvgSYDLDvvLAAGDLIRAHPL------YPPALVLILLGAFTKSAQFP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML------FFskmnsILLLVGCLTMLMSGIAANYEFDLKKIIA 273
Cdd:PRK12648 226 FHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLagteewFW-----IVGGAGLITLLLGAYFALFQHDLKGLLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 274 LSTLSQLGLMMGILGFGYPL---MSFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSL 350
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHET-GTRDMRRLSGLRRLMPITATLAMVAAAAM 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 403531479 351 CGFPFLSGFYSKDL----ILELSSFGSINLIIYFLFFFSTGLTTMYSFRLLY 398
Cdd:PRK12648 380 AGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIH 431
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-398 |
1.62e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 151.62 E-value: 1.62e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYM-YGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12644 72 LDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 132 VKS-----VNAGLLTA---LSNRVGdvLILLSISwmlnFGSWNYIYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAW 203
Cdd:PRK12644 152 RAAsrraaLQALLVTTaggLAMLVG--IIILGQA----AGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 204 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNS---ILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQL 280
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPG--FADVPVwrpTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 281 GLMMGILGFGYP---LMSFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLS 357
Cdd:PRK12644 304 GFLTVLVGIGTRdaaLAGLAMLLAHALFKAALFLVVGIIDHST-GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 403531479 358 GFYSKDLILE----LSSFGSINLIIYFLFFFSTGLTTMYSFRLLY 398
Cdd:PRK12644 383 GFVAKEAALEavlhDGALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
49-397 |
7.05e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 137.27 E-value: 7.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 49 MAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12649 74 FSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 129 YQNVKSVNAGLLTALSNRVGDVLILLSISWMLNF--GSWNYIYYYDYFFSSYN------YSVICLMVMVAGMTKSAQIPF 200
Cdd:PRK12649 154 WRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVitGTYDIATILQDSELIENikghplFLITLILIFIGAAAKSAQGPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 201 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlfFSKMNSILLLV---GCLTMLMSGIAANYEFDLKKIIALSTL 277
Cdd:PRK12649 234 YIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPI--FSGTEAWFILVsgtGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 278 SQLGLMMGILGFG---YPLMSF----FHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSL 350
Cdd:PRK12649 312 SQLAYLMTMYGYTtyhEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITFIVASIAALAM 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 403531479 351 CGFPFLSGFYSKDLILELS-----SFGSINLIIYFLFFFSTG-LTTMYSFRLL 397
Cdd:PRK12649 391 AGIPPLNGFLSKEMFYETSvemgaLIGGPFTIIIPAVAVLGGvFTFAYSIKLI 443
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
45-384 |
1.08e-32 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 131.25 E-value: 1.08e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 45 SMIIMAIILDWMSLIFMSFVLIISSMVLYYSNDYMY-------GDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDG 117
Cdd:PRK06525 65 DVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 118 LGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWMLNFGSWNYIYYYDYFFSSYNYSVIcLMVMVAGMTKSAQ 197
Cdd:PRK06525 145 TGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVF-LGILFAAWGKSAQ 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 198 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspMLFFSKMNSILLLVG----CLTMLMSGIAANYEFDLKKIIA 273
Cdd:PRK06525 224 LPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIPHVIGYVGavmaIVTLLYGFLMYLPQQDMKRLLA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 274 LSTLSQLGLM-----MGILGFGYPLM-SFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIAN 347
Cdd:PRK06525 302 YSTITQLGYMffglsLAILGSRLALEgSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLPRLRGVLKKLPLVGVGFCVAA 380
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 403531479 348 LSLCGFPFLSGFYSKDLIL----ELSSFGSINLIIYFLFFF 384
Cdd:PRK06525 381 LAITGVPPFNGFFSKFPIFaagfELSVEYWILLPAMVLLLI 421
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
53-410 |
5.94e-32 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 131.20 E-value: 5.94e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYM-YGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 132 VKSVNAGLLTALSNRVGDVLILLSISWMLNF--GSWNYIYYYDYFFSSYNYSVIC---LMVMVAGMTKSAQIPFSAWLPA 206
Cdd:PRK12645 156 REASRYGAQKSMLITVFGGLSMLGGFILLYImtGSFSIREMIANADEIQNSPLFIpamILILLGAFTKSAQFPFYIWLPD 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 207 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKM-NSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMG 285
Cdd:PRK12645 236 AMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVwFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMS 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 286 ILGFG-------------YPLMSF---FHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLS 349
Cdd:PRK12645 316 LLGIGaaslhyqgddskiYAAAITaaiFHLINHATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIMPITFTIALIGALS 394
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 350 LCGFPFLSGFYSKDLILE---------LSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTL 410
Cdd:PRK12645 395 MAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKPEQL 464
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-399 |
9.07e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 122.68 E-value: 9.07e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSndYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK08375 75 ADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 133 KSVNAGLLTALSNRVGDVLILLSISWMLNF-GSWNYIYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAP 211
Cdd:PRK08375 153 RALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 212 TPVSALVHSSTLVTAGVYLLIRFS----PMLFFSKMN--SILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMG 285
Cdd:PRK08375 233 PPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGlgWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 286 ILGFGYPLM---SFFHLLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSK 362
Cdd:PRK08375 313 GLALLTPLAlaaGLLHLLHHALMKGALFLAAGA-IEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSK 391
|
330 340 350
....*....|....*....|....*....|....*..
gi 403531479 363 DLILeLSSFGSINLIIYFLFFFSTGLTTMYSFRLLYY 399
Cdd:PRK08375 392 WYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
49-376 |
3.35e-27 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 116.37 E-value: 3.35e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 49 MAIILDWMSLIFMSFVLIISSMVLYYS---NDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCL 125
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSlgyNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 126 VIY-YQNVKSVNAGLLT-ALSNRVGDVLILLSISWMLNFGSWNYIYYYDYFFSSynySVICLMVMVAGMTKSAQIPFSAW 203
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYfVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL---SLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 204 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKM--NSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQL 280
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 281 GLMMGILG-------FGYPLMSF-------FHLLTHALFKSLLFLCAGCYIHSLFDnQDIRYMGSLTLFMPYTSACLNIA 346
Cdd:PRK08667 307 GIILMGIGlyvifgvYGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340 350
....*....|....*....|....*....|
gi 403531479 347 NLSLCGFPFLSGFYSKDLILElSSFGSINL 376
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE-SFFQSFSV 414
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-556 |
1.79e-24 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 100.32 E-value: 1.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 392 YSFRLLYYSLIKPFSFNTLFNFNV-GRDMNVGMFFLLLFTVLGGSLLSWLIFPVPFCVYLPFSLKMLTMVVVLLGLYFGY 470
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINEnNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 471 LLSLLYFNMKNFCNPFFINDFFGLMWFMPIISTKLISYNVLVIGGLYTSFMDYGWLEYYGAQGIYNFFMYFIKQYLNLFD 550
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
....*.
gi 403531479 551 YNFKTY 556
Cdd:pfam06455 161 GLIKIY 166
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-366 |
5.76e-24 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 106.51 E-value: 5.76e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 94 LFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSV-NAGLLTALSNRVGDVLILLSISWML-NFGSWNYIYYY 171
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIrRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 172 DYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS------PMLFFSkmn 244
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfdllgaPGWWWG--- 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 245 SILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILG-------FGYPLMS-------FFHLLTHALFKSLLF 310
Cdd:PRK06521 277 VLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGlamvfiaYGMPLLAalaltaaLYHLLNHALFKSLLF 356
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 403531479 311 LCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06521 357 LGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
1.17e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 104.78 E-value: 1.17e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 56 MSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKsv 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 136 nAGLLTA----LSNRVGDVLILLSIS-WMLNFGSWN----YIYYYDYFFSSYNYSVICLMVMvAGMTKSAQIPFSAWLPA 206
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSlsalWAHLAAQGASPSLQAAALLLVL-AVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 207 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLFFSKM-NSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMG 285
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPaRWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260
....*....|....*....|....*....
gi 403531479 286 ILGFGYPLMSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
35-441 |
1.46e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 104.41 E-value: 1.46e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 35 IEWEICSFNSSMIIMAIildwmsliFMSFVLIIssmvlyYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLG 114
Cdd:PRK08376 84 IIWEVDLFGAFMALIAT--------IVSFLAVL------YSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 115 WDGLGLVSYCLVIYYQNV-KSVNAGLLTALSNRVGDVLILLSISwmLNFGSWNYIYY----YDYFFSSYNYSVICLMVMV 189
Cdd:PRK08376 150 LEIMSIASYALVAFRNDTwEAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGTLNMaylaVKMSENPTVVAKIALALFI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 190 AGMT-KSAQIPFSAWLPAAM-AAPTPVSALVHSSTLvtAGVYLLIRFSPMLFFSKMNS-----ILLLVGCLTMLMSGIAA 262
Cdd:PRK08376 228 AGLAmKSGAVPVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLatvgwVIIILGCLTMFVGVAMA 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 263 NYEFDLKKIIALSTLSQLGLMM-----GILGFGYPLMS----------FFHLLTHALFKSLLFLCAGCYIHSLfDNQDIR 327
Cdd:PRK08376 306 VVQKDVKRLLAYHSVSQIGYMLlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIYET-GTRNLN 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 328 YMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILElSSFgSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSF 407
Cdd:PRK08376 385 ELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYE-SSA-LFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSE 462
|
410 420 430
....*....|....*....|....*....|....
gi 403531479 408 NTLFNFNVGRDMNVGMFFLLLFTVLGGsLLSWLI 441
Cdd:PRK08376 463 KVMNVKEPPKPMLVPMLILAIAIIGMG-LFPWQI 495
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
2.58e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 103.51 E-value: 2.58e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 52 ILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 132 VK-SVNAGLLTALSNRVGDVLILLSISWM------LNF--------GSWNYIYYYDYFFSSYNYSVICLMVMVAGMTKSA 196
Cdd:PRK12667 159 RGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMadlsakirGLSFPLTGGLAGNPPLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 197 QIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN---------SILLLVGCLTMLMSGIAANYEF 266
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSlidfraalsPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 267 DLKKIIALSTLSQLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCYIHSlFDNQDIRYMGSLTLFMPYTSACL 343
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 403531479 344 NIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTgLTTMYSFRLLY 398
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-367 |
2.11e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 97.33 E-value: 2.11e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 193 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSKMnsILLLVGCLTMLMSGIAANYEFDLKKII 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLEKDLKRML 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 273 ALSTLSQLGLMmgILGfgyPLMSFFHLLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGSLTLFMPytsacLNIANLSLCG 352
Cdd:PRK07234 274 AFSTISQLGFI--LAA---PLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIP-----LTMASFSIAG 342
|
170
....*....|....*
gi 403531479 353 FPFLSGFYSKDLILE 367
Cdd:PRK07234 343 FPLLAGFVSKVLTLK 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-408 |
5.91e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 96.04 E-value: 5.91e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYMYGDV--NFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 131 NVKSVNAGLlTALSNRVGDVLILLSISWMLNFGSWNYIYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMAA 210
Cdd:PRK06589 161 NNISLSGGY-KYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 211 PTPVSALVHSSTLVTAGVYLLIRFSPMLF-------FSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLM 283
Cdd:PRK06589 240 HYPVSALLHAVIVVKTGLFCIYKILLYIFglsylqrIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLA 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 284 MGILGFGYPL---MSFFHLLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFY 360
Cdd:PRK06589 320 LLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFI 398
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 403531479 361 SKDLILE---LSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFN 408
Cdd:PRK06589 399 SKFLILLaasEQNQPWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSEN 449
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
61-450 |
2.10e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 94.98 E-value: 2.10e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 61 MSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLL 140
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 141 TA-LSNRVGDVLILLSISWMLNF-GSWNY----IYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPV 214
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFsdlaAWAATANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 215 SALvHSSTLVTAGVYLLIRFSPMLFFSKMNSILLLV-GCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPL 293
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPVALTVLIViGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 294 MSFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGS 373
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILTT-ITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVS 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 374 INLIIYFLFF-FSTGLTTMYSFRLLYYSLIKPFSFNTLfnfNVGRDMNVGMFFLLLFTVL-------GGSLLSWLIFPVP 445
Cdd:PRK07390 413 PWLVGVLLLVnALTAFNLTRVFRLVFLGKPQQKTRRSP---EVLWPMALPMVILAGFTLHlplllqqWGLLPSWEALNLW 489
|
....*
gi 403531479 446 FCVYL 450
Cdd:PRK07390 490 AAPLL 494
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
53-398 |
3.79e-18 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 88.13 E-value: 3.79e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSF-VLIISSMVLYYSNDYMYGDVNFNRFIILVSLFVLSMMFliiSPNLISILLGWDGLGLVSYcLVIYYQN 131
Cdd:PRK08668 67 LTHLSWFFAMIsLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSF-MMVPMGK 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 132 VKSVNAGLLTALSNRVGDVLILLSISWMLN-FGSWNYIYYYDYFFSSYNYS---VICLMVMVAGMTKSAQIPFSAWLPAA 207
Cdd:PRK08668 143 KESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINDTSTGfalIVFLFLLAFGVAKAGIFPLHVWAPDA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 208 MA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLFFSKM-------------NSILLLVGCLTMLMSGIAANYEFDLKKIIA 273
Cdd:PRK08668 223 YSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 274 LSTLSQLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMPYTSACLNIANLSL 350
Cdd:PRK08668 302 YSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIYRT-GTTKISEMGGLIEKMPFTFAMYLVAIISL 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 403531479 351 CGFPFLSGFYSKDLILElsSFGSINL-IIYFLFFFSTGLTTMYSFRLLY 398
Cdd:PRK08668 381 AGIPPMSGFASKWLIFE--ALISKGMpITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
53-314 |
3.49e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 84.70 E-value: 3.49e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 53 LDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRFIILVSL--FVLSMMFLiiSPNLISILLGWdGLGLVSYCLVIYYQ 130
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCW-GATLLGLTLLIGLN 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 131 NVKSV--NAGLLTALSNRVGDVLILLSISWM-LNFGSWNYIYYY----DYFFSSYNYSVICLMVMVAGMTKSAQIPFSAW 203
Cdd:PRK08601 147 KGWKVarEAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLsnenLAQLGTWEKTGINLLLILAVMIPAAQWPFQRW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 204 LPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLFFSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLM 283
Cdd:PRK08601 227 LIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFM 305
|
250 260 270
....*....|....*....|....*....|.
gi 403531479 284 MGILGFGYPLMSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08601 306 LVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-441 |
1.03e-16 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 82.86 E-value: 1.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 50 AIILDWMSLIFMSFVLIISSMVLYYSNDYMYG-DVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLV-I 127
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERrGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 128 YYQNVKSVNAGL----LTALSNrvgdVLILLSISWMLNF-GSWNYIYYYDYFFSSYNYS---VICLMVMVAGMT-KSAQI 198
Cdd:COG1007 145 RRDDRRSSEAALkyflLGALSS----GFLLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLAfKLSAV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 199 PFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSPMLFFS---KMNSILLLVGCLTMLMSGIAANYEFDLKKIIA 273
Cdd:COG1007 221 PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGlaaDWQLLLAVLAVLSMTVGNLAALAQTNVKRMLA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 274 LSTLSQLG-LMMGILG---FGYPLMsFFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLS 349
Cdd:COG1007 299 YSSIAHAGyLLLGLAAgtpLGVSAA-LFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 350 LCGFPFLSGFYSKDLILeLSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPfsFNTLFNFNVGRDMNVGMFFLLLF 429
Cdd:COG1007 378 LAGIPPTAGFFGKFYVF-SAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYFDE--PEEEAPISAPPGLRVALVIAALL 454
|
410
....*....|..
gi 403531479 430 TVLGGSLLSWLI 441
Cdd:COG1007 455 VLLLGIFPGPLL 466
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
197-398 |
7.55e-16 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 80.20 E-value: 7.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 197 QIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLF----FSKMNSILLLVGCLTMLMSGIAANYEFDLKKI 271
Cdd:PRK08377 222 LFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQnangWSSVLKLVIIMATLTVFFAELSALRQKNVKRM 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 272 IALSTLSQLGLMMGILGFGYPL---MSFFHLLTHALFKSLLFLCAGCYIHSLFDNQdIRYMGSLTLFMPYTSACLNIANL 348
Cdd:PRK08377 301 IAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGAL 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 403531479 349 SLCGFPFLSGFYSKDLILeLSSFGSINLIIYFLFFFSTGLTTMYSFRLLY 398
Cdd:PRK08377 380 STVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLIH 428
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-387 |
2.63e-15 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 78.78 E-value: 2.63e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 108 LISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISW-MLNFGSWNYIYYYDYFFSSYnysvicLM 186
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAFGAIAGLGGTAA------WL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 187 VMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlffskmNSILLLVGCLTMLMSGIAANYEF 266
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPG------TELLIYIGAAMAVYGVFFALLEN 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 267 DLKKIIALSTLSQLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCYIHSLFDNqDIRYMGSLTLFMPYTSACL 343
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTALFC 341
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 403531479 344 NIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTG 387
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAG 385
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
199-397 |
3.74e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.65 E-value: 3.74e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 199 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSPMLF---FSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIAL 274
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 275 STLSQLGLMM---------GILGfgyplmSFFHLLTHALFKSLLFLCAGcYIHSLFDNQDIRYMGSLTLFMPYTSACLNI 345
Cdd:COG1008 306 SSVSHMGFVLlgifalnplGLQG------AVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLL 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 403531479 346 ANLSLCGFPFLSGFYSKDLILeLSSFGSiNLIIYFLFFFSTGLTTMYSFRLL 397
Cdd:COG1008 379 AALASLGLPGTSGFVGEFLVL-LGAFQV-NPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
182-394 |
5.13e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.52 E-value: 5.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 182 VICLMVMVAGMTKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFF---SKMNSILLLVGCLTMLMS 258
Cdd:PRK12663 208 TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMVIG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 259 GIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCYIHsLFDNQDIRYMGSLTLF 335
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 403531479 336 MPYTSACLNIANLSLCGFPFLSGFYSKDLILElssfGSINLIIYFLF--FFSTGLTTMYSF 394
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ----GALDNGAYILLalMLITSLITMYSL 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
185-384 |
5.98e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 71.32 E-value: 5.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 185 LMVMVAGMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPML----FFSKMNSILLLVGCLTMLMSG 259
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 260 IAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSF---FHLLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGSLTLFM 336
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 403531479 337 PYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFF 384
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLL 415
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-367 |
3.27e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.84 E-value: 3.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 181 SVICLMVMVAGMTKSAQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLFFS-KMNSILLLVGCLTMLMS 258
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGgGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 259 GIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPL-MS--FFHLLTHALFKSLLFLCAGcyihsLFDNQD----IRYMGS 331
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVVG-----LIERQAgsssLRRLGG 362
|
170 180 190
....*....|....*....|....*....|....*.
gi 403531479 332 LTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILE 367
Cdd:PRK12665 363 LAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-362 |
6.86e-12 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 67.92 E-value: 6.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 50 AIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNrFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 129 YQNVKSVNAGL----LTALSNrvgdVLILLSISWMLNF-GSWNYIYYYDYFFSSYNYSVI----CLMVMVAGMTKSAQIP 199
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALAS----GFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 200 FSAWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLFFS---KMNSILLLVGCLTMLMSGIAANYEFDLKKIIALS 275
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGlseDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 276 TLSQLG-LMMGILGFGYPLMS--FFHLLTHALFKSLLFLCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCG 352
Cdd:PRK05777 302 SIAHAGyLLVGLAAGTAEGYSavLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 403531479 353 FPFLSGFYSK 362
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-393 |
1.61e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 66.51 E-value: 1.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 181 SVICLMVMVAGMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN---SILLLVGCLTML 256
Cdd:PRK07691 209 TVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSfthYLILILALLTII 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 257 MSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCYIHsLFDNQDIRYMGSLT 333
Cdd:PRK07691 288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLI 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 334 LFMPYTSACLNIANLSLCGFPFLSGFYSKDLILElSSFGSINLIIYFLFFFStGLTTMYS 393
Cdd:PRK07691 367 KRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLS-SLLVLYS 424
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
193-366 |
2.88e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 65.72 E-value: 2.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 193 TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN----SILLLVGCLTMLMSGIAANYEFD 267
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 268 LKKIIALSTLSQLGLMMGILGFGYPLMSF---FHLLTHALFKSLLFlCAGCYIHSLFDNQDIRYMGSLTLFMPYTSACLN 344
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180
....*....|....*....|..
gi 403531479 345 IANLSLCGFPFLSGFYSKDLIL 366
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
1.03e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.00 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 198 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS-----PMLFFSKMnsiLLLVGCLTMLMSGIAANYEFDLKKI 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSllggnAPLWWGVA---LLVLGMITAFVGGLYALMEHNIQRL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 272 IALSTLSQLGLMMGILGFGYPLMS--------------FFHLLTHALFKSLLFLCAGCYIHSLfDNQDIRYMGSLTLFMP 337
Cdd:PRK08042 273 LAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGKKMP 351
|
170 180
....*....|....*....|..
gi 403531479 338 YTSACLNIANLSLCGFPFLSGF 359
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGF 373
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
194-433 |
1.42e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.34 E-value: 1.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 194 KSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMNSILLLVGCL---TMLMSGIAANYEFDLK 269
Cdd:TIGR01972 216 KVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALgviAIIYGALIALAQTDIK 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 270 KIIALSTLSQLGL-MMGILGFGYPLMS--FFHLLTHALFKSLLFLCAGcYIHSLFDNQDIRYMGSLTLFMPYTSACLNIA 346
Cdd:TIGR01972 295 RLIAYSSISHMGFvLLGIFSFNELGISgaVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLF 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 347 NLSLCGFPFLSGFYSKDLILeLSSFgSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVGRDMNVGMFFL 426
Cdd:TIGR01972 374 AMASLGLPGTSGFVGEFLIL-LGSF-KVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAP 451
|
....*..
gi 403531479 427 LLFTVLG 433
Cdd:TIGR01972 452 LVVLILF 458
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-445 |
2.06e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 60.13 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 52 ILDWMSLIFMSFVLIISSMVLYYSNDYmygDVNFNRFIILVSLFVLS---MMFLIISPNLISILLGWDGLGLVSYCLVIY 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRK---EISVNKIPSFYSAFLLClggLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 129 YQNVKSVNAGLLTALSNRVGDVLILLSISWM------LNFGSWNYIYYYDYFFSSYNYSVIClmVMVAGMTKSAQIPFSA 202
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLyaitgtLNMGDMFLIIQDLPTNRAIQIGVLF--IMVGLFIKAALFPFHK 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 203 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-----FSPMLFFSKM--NSILLLVGCLTMLMSGIAANYEFDLKKIIALS 275
Cdd:PRK12662 231 WLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTLpfNNVFMILAALAIVFGSVLAILSKDIKRIFAYS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 276 TLSQLG---LMMGILGFGYPLMSFFHLLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCG 352
Cdd:PRK12662 311 SISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGS-ISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIG 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 353 FPFLSGFYSKDLILElSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFN---FNVGRDMNVGMFFLLLF 429
Cdd:PRK12662 390 MPPTSGFVAKWYILD-AFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKANdkaFKTPNAMVLCIWIMAIL 468
|
410
....*....|....*.
gi 403531479 430 TVLGGsllswlIFPVP 445
Cdd:PRK12662 469 SIIVG------IYPIP 478
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-362 |
8.52e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 58.09 E-value: 8.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 54 DWMSLIFMSFVLIISSMVLYYSNDYMY-GDVNFNRFIILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 132 VKSVNAGLLTALSNRVGDVLILLSISWM---------LNFGSWNYIYYYDYFFSSYNYSVICLMVMVAgmTKSAQIPFSA 202
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLyglsggeieLQEIVNGLINTQMYNSPGISIALIFITVGIG--FKLSLAPFHQ 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 203 WLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMN---SILLLVGCLTMLMSGIAANYEFDLKKIIALSTLS 278
Cdd:CHL00049 236 WTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 279 QLG-LMMGILGfGYPLMSFFHLLTHALFKSLLFLCA-GCYIhsLF------DNqdIRYMGSLTLFMPYTSACLNIANLSL 350
Cdd:CHL00049 315 QIGyVIIGIIV-GDSNDGYASMITYMLFYIFMNLGTfACIV--LFglrtgtDN--IRDYAGLYTKDPFLALSLALCLLSL 389
|
330
....*....|..
gi 403531479 351 CGFPFLSGFYSK 362
Cdd:CHL00049 390 GGIPPLAGFFGK 401
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-442 |
1.03e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 54.74 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 89 IILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSVNAGLLTALSNRVGDVLILLSISWMLNFGSWNYI 168
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 169 YYydyffssynysvicLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLFFSKMNSILL 248
Cdd:PRK12664 146 CK--------------LLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 249 LVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPL-----MSFFHLLTHALFKSLLFLCAGCYIHSLfDN 323
Cdd:PRK12664 206 FLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRT-RK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 324 QDIRYMGSLtLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTGLTTMYS--FRLLYYSL 401
Cdd:PRK12664 285 FNLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASvgLKFFWYAF 363
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 403531479 402 IKPFSFNTLFNfNVGRDMNVGMFFLLLFTVLGGSLLSWLIF 442
Cdd:PRK12664 364 ISKSKSKPEAE-KVYIGSKLSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
222-369 |
2.87e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.11 E-value: 2.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 222 TLVTAGVYLLIRFSPMLFFSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPL---MSFFH 298
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFH 323
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 403531479 299 LLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELS 369
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAA 393
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
198-396 |
1.22e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 51.36 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 198 IPFSAWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFSPMLF--FSKMNSILLLVGCLTMLMSG-IAANYEFDLKKIIA 273
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLPLFpdASHEFAPIIITLGVIAIIYGaLVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 274 LSTLSQLG-LMMGILGFGYPLMS--FFHLLTHALFKSLLFLCAGcYIHSLFDNQDIRYMGSLTLFMPYTSACLNIANLSL 350
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIQgaIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 403531479 351 CGFPFLSGFYSKDLILelssFGSINLIIYFLFFFSTG--LTTMYSFRL 396
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL----LGSFQVNPVIAFIATTGliLAAVYSLWL 429
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-443 |
2.13e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.48 E-value: 2.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 60 FMSFVLIISSMVLYYSNDYMYGDVNFNRFI-ILVSLFVLSMMFLIISPNLISILLGWDGLGLVSYclVIYYQNVKSVNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSY--VAIALTKKNKRPA 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 139 LLTALSNRVGDVLILLSISWmlnfgswNYIYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPF--SAWLPAAMA-APTPVS 215
Cdd:PRK06459 123 FVFMAFGELSTVLILAGFAW-------AFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 216 AlVHSSTLVTAGVYLLIR---FSPMLFFSKMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGF--- 289
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 290 ---------GYPLMS-FFHLLTHALFKSLLFLCAGcyihsLFDNQDIRYMGSLTLFMPYTSACLniANLSLCGFPFLSGF 359
Cdd:PRK06459 275 tkqlitsieHFSLITvILYSFAHSVAKTGLFLSSG-----LQEKQSITYSKKIRNRWIELGLTL--LASSLSGLLPNIGG 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 360 YSKDLILE-LSSFGSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVGRDMNVG--MFFLLLFTVLGGSL 436
Cdd:PRK06459 348 VASWLLLEsLFMFAYVLHNVISILFIVTGAIIAMGEGLATALLIKYITYTSLFRNTKEQLSKIKkyPILLSALIVLILGF 427
|
....*..
gi 403531479 437 LSWLIFP 443
Cdd:PRK06459 428 TLPYLIS 434
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
194-449 |
4.94e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 46.21 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 194 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLFFSK---MNSILLLVGCLTMLMSGIAANYEFDLKK 270
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAAseyFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 271 IIALSTLSQLGL---------MMGILGfgyplmSFFHLLTHALFKSLLFLcAGCYIHSLFDNQDIRYMGSLTLFMPYTSA 341
Cdd:MTH00204 302 LIAYSSVAHMGLvplglfthtIEGLVA------AVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVI 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 342 CLNIANLSLCGFPfLSGFYSKDLILELSSFgSINLIIYFLFFFSTGLTTMYSFRLLYYSLIKPFSFNTLFNFNVGRDMNV 421
Cdd:MTH00204 375 IMLVLSLANMGFP-LSCNFVGEFFSLLAAF-EYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELL 452
|
250 260
....*....|....*....|....*...
gi 403531479 422 GMFFLLLFTVLGGSLLSWLIFPVPFCVY 449
Cdd:MTH00204 453 AILPLIIAIFLLGIVPFIIIDLVKNSLV 480
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
49-88 |
8.66e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.10 E-value: 8.66e-05
10 20 30 40
....*....|....*....|....*....|....*....|
gi 403531479 49 MAIILDWMSLIFMSFVLIISSMVLYYSNDYMYGDVNFNRF 88
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
179-397 |
1.08e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 45.09 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 179 NYSVICLMVMVAGM-TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLF---FSKMNSILLLVGCLT 254
Cdd:PRK07363 202 NTQLILLTGLLLGFgIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFpqtWSLVAPGLAIIGTIS 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 255 MLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGS 331
Cdd:PRK07363 282 VIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGI-VERKVGTRDLDVLNG 360
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 403531479 332 L---TLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILElSSFGSINlIIYFLFFFSTGLTTMYSFRLL 397
Cdd:PRK07363 361 LmnpIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ-GSFSTFP-IPTLLCIVASGLTAVYFVILL 427
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-402 |
2.40e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.66 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 184 CLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALvhssTLVTagvylLIRFSPM-LFFSKMNS----ILLLVGCLTMLMS 258
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTAL----ILST-----WQKLAPLtLLLMTSNSlnptLLLTLAILSTLIG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 259 GIAANYEFDLKKIIALSTLSQLGLMMGILGFGyPLMSFFHLLTHALFKSLLFLCagcyIHSLFDNQdIRYMGSLTLFMPY 338
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFLT----LNTTSTKT-LKDMMTSWTKSPT 239
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 403531479 339 TSACLNIANLSLCGFPFLSGFYSKDLIL-ELSSFGSInlIIYFLFFFSTGLTTMYSFRLLYYSLI 402
Cdd:MTH00112 240 LNTTLMLTLLSLAGLPPLTGFMPKWLILqELTKQNMT--PTATIMAMLSLLSLFFYLRLTYISTI 302
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
198-392 |
8.83e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 41.99 E-value: 8.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 198 IPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFSKMNSI---LLLVGCLTMLMSGIAANYEFDLKKIIA 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 274 LSTLSQLGLMMGILGFGYPLM---SFFHLLTHALFKSLLFLCAGCyIHSLFDNQDIRYMGSL---TLFMPYTSACLNIAN 347
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSilaAVFQMISHGLISALLFLLVGV-VYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 403531479 348 LSLCGFPFLSGFYSKDLILElSSFgSINLIIYFLFFFSTGLTTMY 392
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFR-GSF-PIFPVQTLLCMIGTGLTAVY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
183-394 |
1.07e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.83 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 183 ICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLFFSKMN--SILLLVGCLTMLMSG 259
Cdd:MTH00226 232 IFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLGAQNlaPAVIAMGIVGIVYGS 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 260 IAANYEFDLKKIIALSTLSQLGL---------MMGILGfgyplmSFFHLLTHALFKSLLFLCAgCYIHSLFDNQDIRYMG 330
Cdd:MTH00226 312 FATCRQIDVKRLVAYSSVAHMGLvsitlvthdIIGLTG------SIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYR 384
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 403531479 331 SLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILeLSSFgSINLIIYFLFFFSTGLTTMYSF 394
Cdd:MTH00226 385 GLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI-LSSF-NWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
162-442 |
1.79e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 40.72 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 162 FGSWNYIYYYDYFFSSYNYSVICLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLffs 241
Cdd:MTH00200 73 GGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPAL--- 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 242 kMNSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGyPLMSFFHLLTHALFKSLLFLcagcyIHSLF 321
Cdd:MTH00200 150 -NSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-----LLNLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 322 DNQDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILelssfgsINLIIYFLFFFSTGLTTMYSFRLLYYS- 400
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSLLSLFFYLr 295
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 403531479 401 -------LIKPFSFNTLFNFNVGRDMNVGMFFLLLFTVLGGSLLSWLIF 442
Cdd:MTH00200 296 lsyltllTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
244-449 |
2.46e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 40.30 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 244 NSILLLVGCLTMLMSGIAANYEFDLKKIIALSTLSQLGLMMGILGFGyPLMSFFHLLTHALFKSLLFLcagcyIHSLFDN 323
Cdd:MTH00041 151 SNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIFL-----IGNNFSL 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 324 QDIRYMGSLTLFMPYTSACLNIANLSLCGFPFLSGFYSKDLILELSSFGSINLIIYFLFFFSTgLTTMYSFRLLYYSLIK 403
Cdd:MTH00041 225 STLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSL-LSLFFYLRISFNTSLT 303
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 403531479 404 PFSFNTLFNFNVGRDMNVGMFFLLLFTVLGGSLLSWLIFPVPFCVY 449
Cdd:MTH00041 304 LFPQHSISLFSWRNSGNITVYGVILSILSSISILGLLLIPLFLSFL 349
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
184-367 |
2.96e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.90 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 184 CLMVMVAGMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLffskmNS-ILLLVGCLTMLMSGIAA 262
Cdd:MTH00070 95 TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL-----NSnLLIIMGLLSTLIGGWGG 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 263 NYEFDLKKIIALSTLSQLGLMMGILGFGYPLMSF----FHLLTHALFKSLLFLCAgcyihslfdnQDIRYMGSLTLFMPY 338
Cdd:MTH00070 170 LNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLnlliYLIMTSSMFLMLMNLNS----------TNINKLSSSWSKNPT 239
|
170 180
....*....|....*....|....*....
gi 403531479 339 TSACLNIANLSLCGFPFLSGFYSKDLILE 367
Cdd:MTH00070 240 LTSMMMLTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
181-362 |
3.55e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 40.03 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 181 SVICLMVMVAGMT-KSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLFFS---KMNSILLLVGCLTM 255
Cdd:PRK02504 209 LALALVFVIAGIAfKISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLLVTAFPSfdeQWKLLFTALAILSM 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 403531479 256 LMSGIAANYEFDLKKIIALSTLSQLGLMMgiLGF------GYPLMsFFHLLTHaLFKSL-LFLCAGCYIHSLFDNQDIRY 328
Cdd:PRK02504 288 VLGNVVALAQTSMKRMLAYSSIGQAGFVM--IGLvagteaGYASM-VFYLLAY-LFMNLgAFACVILFSLRTGTDQISDY 363
|
170 180 190
....*....|....*....|....*....|....
gi 403531479 329 MGsLTLFMPYTSACLNIANLSLCGFPFLSGFYSK 362
Cdd:PRK02504 364 AG-LYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| |
