|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
4-575 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 661.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 4 FSICSLSFFSLFLISSLFFILGINFLIFDYSIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLG 83
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 84 EKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISWMLN 163
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 164 FGSWNYIFYYDFISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFF 243
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 244 NLGWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLK 323
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 324 GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSM 403
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 404 SGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGYLISKLSISYN 483
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 484 LFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWYDLNFSSYLLI 563
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|..
gi 470235850 564 FVFWMFVLIIFL 575
Cdd:MTH00165 561 FLLWMIILLLLF 572
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
4-575 |
1.72e-162 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 475.10 E-value: 1.72e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 4 FSICSLSFFSLFLISSLFFILGINFLIFDYSIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLG 83
Cdd:MTH00151 1 LKMSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 84 EKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISWMLN 163
Cdd:MTH00151 81 DPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 164 FGSWNYIFYYDFisdnNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFF 243
Cdd:MTH00151 161 LGHWSILSMWDF----KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 244 NLG-WGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNL 322
Cdd:MTH00151 237 SGFsSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 323 KGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYS 402
Cdd:MTH00151 317 SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCL 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 403 MSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVclgsYLGYLISKLSISY 482
Cdd:MTH00151 397 VWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVI----LLGLFLSFGFWDS 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 483 NLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWYDLNFSSYLL 562
Cdd:MTH00151 473 GFSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIG 552
|
570
....*....|...
gi 470235850 563 IFVFWMFVLIIFL 575
Cdd:MTH00151 553 LILLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
11-575 |
1.51e-161 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 472.59 E-value: 1.51e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 11 FFSLFLISSLFFILGINFLIFDYSIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRF 90
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 91 ILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISWMLNFGSWNyI 170
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-I 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 171 FYYDFISdnNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPML-SFFNLGWGL 249
Cdd:MTH00209 165 FYLNFNS--NLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 250 LFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIR 329
Cdd:MTH00209 243 LLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 330 FMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNF 409
Cdd:MTH00209 323 MVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 410 SVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGYLISKlsisYNLFSFNY 489
Cdd:MTH00209 403 KSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLK----KNFFLIKG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 490 SNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWYDLNFSSYLLIFVFWMF 569
Cdd:MTH00209 479 YKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILL 558
|
....*.
gi 470235850 570 VLIIFL 575
Cdd:MTH00209 559 GVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-574 |
2.05e-158 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 465.01 E-value: 2.05e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 1 MFYFSICSLSFFSLFLISSLFFILGINFLIFDYSIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDY 80
Cdd:MTH00207 1 LRMFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 81 MLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISW 160
Cdd:MTH00207 81 MQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 161 MLNFGSWNYIFYYDfisdNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPML 240
Cdd:MTH00207 161 TLNQGHWSITNMWQ----TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 241 SFFNL-GWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMI 319
Cdd:MTH00207 237 SSTYWfNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 320 HNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLF 399
Cdd:MTH00207 317 HSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFT 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 400 YYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGYLISKLS 479
Cdd:MTH00207 397 LAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPN 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 480 ISYNLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWYDLNFSS 559
Cdd:MTH00207 477 ITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNN 556
|
570
....*....|....*
gi 470235850 560 YLLIFVFWMFVLIIF 574
Cdd:MTH00207 557 YLMMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-575 |
1.08e-114 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 353.49 E-value: 1.08e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 1 MFYFSICSLSFFSLFLISSLFFILGINFLIFDY--SIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSE 78
Cdd:MTH00211 21 LLPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGleTILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 79 DYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTAL-SNRVGDVSILIS 157
Cdd:MTH00211 101 WYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLS 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 158 ISWML-NFGSWNYIFYYDFisdNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRF 236
Cdd:MTH00211 181 MVWLLlNLNSWEISQLFIL---NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 237 SPML--SFFNLGWgLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMC 314
Cdd:MTH00211 258 SPLFqnNQLILGA-VLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMC 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 315 AGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASY 394
Cdd:MTH00211 337 SGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAY 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 395 SFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMI-SLPFYLKLLTIFVVCLGSYLGY 473
Cdd:MTH00211 417 SFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGL 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 474 LISKLsisynLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIG-YISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSW 552
Cdd:MTH00211 497 ELVNL-----THKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSP 571
|
570 580
....*....|....*....|...
gi 470235850 553 YDLNFSSYLLIFVFWMFVLIIFL 575
Cdd:MTH00211 572 QQGLIKSYLALLLLSLLLILLLF 594
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
21-575 |
6.61e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 296.82 E-value: 6.61e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 21 FFILGINFLIFDY----SIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLL 96
Cdd:MTH00066 42 FFISLIPLMIFINqgleSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLI 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 97 FILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTA-LSNRVGDVSILISISW-MLNFGSWNyiFYYD 174
Cdd:MTH00066 122 FLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAvLYNRVGDIGLILSMAWlAMNTNSWE--LQQI 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 175 FISDNNEMsIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGL-LFFG 253
Cdd:MTH00066 200 FLLNDNST-LPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLG 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 254 CITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMGG 333
Cdd:MTH00066 279 ALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGG 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 334 IVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFSVVS 413
Cdd:MTH00066 359 LQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLS 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 414 SYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMI-SLPFYLKLLTIFVVCLGSYLGYLISKLS--ISYNLFSFNYS 490
Cdd:MTH00066 439 PINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITskTTPKTKMHSFS 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 491 NLVSfigsmwFMPFLTTKIISYLPLKIGY-ISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWYDLNFSSYLLIFVFWMF 569
Cdd:MTH00066 519 NLLA------FFPTIIHRLSPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLL 592
|
....*.
gi 470235850 570 VLIIFL 575
Cdd:MTH00066 593 LMLILL 598
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
34-519 |
4.00e-91 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 292.07 E-value: 4.00e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 34 SIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISI 113
Cdd:MTH00004 61 SITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 114 LLGWDGLGLVSYCLVIYYQNVSSYNAGMLTA-LSNRVGDVSILISISWM-LNFGSWNYifyyDFISDNNEMSIITLL-II 190
Cdd:MTH00004 141 FIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEI----QQLFSPTQTPTLPLLgLI 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 191 LAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGL-LFFGCITMFMSGLGANFEFD 269
Cdd:MTH00004 217 LAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQND 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 270 LKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSS 349
Cdd:MTH00004 297 IKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGN 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 350 LSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLL 429
Cdd:MTH00004 377 LALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRL 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 430 LIVVVFGGSFLSWLIFPM-PYMISLPFYLKLLTIFVVCLGSYLGYLISKLsiSYNLFSFNYSNLVSFIGSMWFMPFLTTK 508
Cdd:MTH00004 457 ALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNM--TTTLTPPKQNTLHNFSNQLAFFNPLTHR 534
|
490
....*....|.
gi 470235850 509 IISYLPLKIGY 519
Cdd:MTH00004 535 LLPMTLLKSSQ 545
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
51-475 |
4.43e-89 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 287.05 E-value: 4.43e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 51 MTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIY 130
Cdd:COG1009 74 FGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 131 YQNVSSYNAGMLTA-LSNRVGDVSILISISWMLN-FGSWNY--IF-YYDFISDNNEMSIITLLIILAAMTSSAQIPFSSW 205
Cdd:COG1009 154 WYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFseLLaAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 206 LPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNL-GWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:COG1009 234 LPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGY 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 285 MMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSK 364
Cdd:COG1009 314 MFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSK 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 365 DLILELTCLS-YMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWL 443
Cdd:COG1009 393 EAILEAALEAgGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGL 472
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 470235850 444 ---------IFPMPYMISLPFYLKLLTIFVVCLGSYLGYLI 475
Cdd:COG1009 473 legllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
3-575 |
5.02e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 287.64 E-value: 5.02e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 3 YFSICSLSFFSLFLISSLFFILGINFLIFdYSIFVEWelFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYML 82
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGCPNI-NISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 83 GEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTA-LSNRVGDVSILISISW- 160
Cdd:MTH00208 133 NDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLs 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 161 MLNFGSWNYIFYYDFISDNNEMSIITLL-IILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPM 239
Cdd:MTH00208 213 LINFNSWNLNEILSLNNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 240 LSFFNLGWGL-LFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSM 318
Cdd:MTH00208 293 ISNSPWFLSLcLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 319 IHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRL 398
Cdd:MTH00208 373 IHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRI 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 399 FYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPyMISLPFYLKLLTIFVVCLGSYLGYLISkL 478
Cdd:MTH00208 453 IFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFL-L 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 479 SISYNLFSFNYSNLVSFigsMWFMPFLTTKIISYLPLKIG-YISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWYDLNF 557
Cdd:MTH00208 531 SLSSNPINSNFFSFLSN---QWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYI 607
|
570
....*....|....*...
gi 470235850 558 SSYLLIFVFWMFVLIIFL 575
Cdd:MTH00208 608 KQYLLSSTLLFLLILTLS 625
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
17-495 |
2.98e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 284.82 E-value: 2.98e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 17 ISSLFFILGINFLIFDYS----IFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFIL 92
Cdd:MTH00108 40 ISYAFIISLIPTMMFIHSgqemIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 93 ILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTA-LSNRVGDVSILISISW-MLNFGSWNyi 170
Cdd:MTH00108 120 YLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWD-- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 171 FYYDFISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGL- 249
Cdd:MTH00108 198 LQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLt 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 250 LFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIR 329
Cdd:MTH00108 278 LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 330 FMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNF 409
Cdd:MTH00108 358 KMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRF 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 410 SVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPM--PYMiSLPFYLKLLTIFVVCLGSYLG----YLISKLSISYN 483
Cdd:MTH00108 438 PPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTtiPQM-TMPLYLKLTALAVTILGFILAlelnLLTNNLKFKYP 516
|
490
....*....|..
gi 470235850 484 LFSFNYSNLVSF 495
Cdd:MTH00108 517 SNTFKFSNMLGY 528
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
39-475 |
1.42e-83 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 272.62 E-value: 1.42e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 39 WELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWD 118
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 119 GLGLVSYCLV-IYYQNVSSYNAGMLTALSNRVGDVSILISISWMLN-FGSWNY--IFYYDFISDNNEMSIITLLIILAAM 194
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 195 TSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMlsfFNLGWGLLFF----GCITMFMSGLGANFEFDL 270
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPL---FELSPTALYLvtiiGAITALFAATVALVQNDI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 271 KKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSL 350
Cdd:TIGR01974 302 KRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 351 SLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLL 430
Cdd:TIGR01974 382 ALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLA 461
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 470235850 431 IVVVFGGSFLSWLIFPMPYMI-----------SLPFYLKLLTIFVVCLGSYLGYLI 475
Cdd:TIGR01974 462 VGSVFAGFFIVPLFEFLKGVLptsaepalehhHVPALEIWSPTAVAILGILLAYLL 517
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-475 |
1.40e-80 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 265.10 E-value: 1.40e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 46 GSLVV-MTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVS 124
Cdd:PRK06590 72 GDFDVdFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 125 YCLV-IYYQNVSSYNAGMLTALSNRVGDVSILISISWML-NFGSWNY--IF---YYDFISDNNEMSIITLLIILAAMTSS 197
Cdd:PRK06590 152 YLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYdeVFaaaPQFFGLGWSALTLICLLLFIGAMGKS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 198 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMlsfFNLGWGLLFF----GCITMFMSGLGANFEFDLKKI 273
Cdd:PRK06590 232 AQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPL---FELSPEALLFvaivGAVTALFAAFIGLVQTDIKRV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 274 IALSTLSQLGLMMgvLAMGYS--DLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLS 351
Cdd:PRK06590 309 LAYSTMSQLGYMF--LALGVGayAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLA 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 352 LCGIPFLTGFYSKDLILElTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNfSVVSSYNDSGYYISFGMFLLLI 431
Cdd:PRK06590 387 LIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEK-EKIHHPHESPAVMTLPLIVLAV 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 470235850 432 VVVFGG-----SFLSWLIFPMPY-----MISLPFYLKLLTIFVVCLGSYLGYLI 475
Cdd:PRK06590 465 LSVFAGalivpPFLGVLPLTTELahgeaEHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
55-403 |
3.81e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 258.22 E-value: 3.81e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 55 FDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 134
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 135 SSYNAGMLTA-LSNRVGDVSILISISWML-NFGSWNY--IFyydFISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAM 210
Cdd:MTH00137 166 ADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEIqqIF---ALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAM 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 211 AAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGL-LFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVL 289
Cdd:MTH00137 243 EGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTcLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTI 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 290 AMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE 369
Cdd:MTH00137 323 GLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIE 402
|
330 340 350
....*....|....*....|....*....|....*
gi 470235850 370 LTCLSYMNYFIFLLYFISTGLTASYSFRL-FYYSM 403
Cdd:MTH00137 403 ALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
9-575 |
4.38e-76 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 253.08 E-value: 4.38e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 9 LSFFSLFLISSLFFILGINFLIFDYSIFVE-WELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNI 87
Cdd:MTH00020 31 LTSSCLIISLSWSFLIFYEILFNSSTTYIKlWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 88 NRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVSSYNAGMLTALSNRVGDVSILISISWMLN-FG 165
Cdd:MTH00020 111 PRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 166 SWNY--IFYYDFISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFF 243
Cdd:MTH00020 191 SLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 244 NLGWGLL-FFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNL 322
Cdd:MTH00020 271 PLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 323 KGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYS 402
Cdd:MTH00020 351 SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLT 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 403 MSGDNNFS--VVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLI--FPMPYMISLPFYLKLLTIFVVCLGSYLGYLISKL 478
Cdd:MTH00020 431 FLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLVIILYFY 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 479 SISY--NLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGY-ISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWYDL 555
Cdd:MTH00020 511 SSKTfrVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHlISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSG 590
|
570 580
....*....|....*....|
gi 470235850 556 NFSSYLLIFVFWMFVLIIFL 575
Cdd:MTH00020 591 LVFNYALVILIGVAIFIWGL 610
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
53-545 |
7.18e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 236.44 E-value: 7.18e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 53 LLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLV-IYY 131
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 132 QNVSSYNAGMLTALSNRVGDVSILISISWMLN-FGSWNYIFYYDFIS---DNNEMSIITLLIILAAMTSSAQIPFSSWLP 207
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVtniNKESLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 208 AAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGLL-FFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMM 286
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 287 GVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDL 366
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 367 ILELTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFS--VVSSYNDSGYYISFGMFLLLIVVVFGGS-----F 439
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKkeVFIGVHESSWNITFPLLLLAFGSIFVGYlgkevV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 440 LSWLIFPMpymisLPFYLKLLTIFVVCLGSYLGYLISKLSISYN------LFSFNYSNLVSFIGSMWFMPFLTTKIISYL 513
Cdd:MTH00210 476 LSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIYNSMVFLIkisrrgVSIRLYHVIYTFLNSAWQFNYVINHFIVKN 550
|
490 500 510
....*....|....*....|....*....|...
gi 470235850 514 PLKIGY-ISFKYFDFGWGEFFGGQGFYSFFVYL 545
Cdd:MTH00210 551 IWKFGHlITYRIIDRGLLEIIGPRGISKVLIKL 583
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
51-406 |
2.12e-62 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 217.58 E-value: 2.12e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 51 MTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLV-I 129
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 130 YYQNVSSYNAGMLTALSNRVGDVSILISIswmLNFGSWNYIFYYDFISDNNEMSIIT------------LLIILAAMTSS 197
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGI---LGLFWATGSFDFDGIADRLSELVSSgavsgwlalllcILVFLGPMAKS 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 198 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFF-NLGWGLLFFGCITMFMSGLGANFEFDLKKIIAL 276
Cdd:PRK07376 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFpAVMTVIAWTGAITAFLGASIALTQNDIKKGLAY 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 277 STLSQLGLMMgvLAMG---YSdLAFFHLLTHALFKALLFMCAGSMIHNLKGI--------QDIRFMGGIVNSMPLTSICF 345
Cdd:PRK07376 322 STISQLGYMV--MAMGcgaYS-AGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITF 398
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 470235850 346 NVSSLSLCGIPFLTGFYSKDLILELTCLSymNYFIFLLYFISTGLTASYSFRLFYYSMSGD 406
Cdd:PRK07376 399 LIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
12-569 |
2.69e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 200.53 E-value: 2.69e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 12 FSLFLISSLFFILGINFLIFDysiFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFI 91
Cdd:MTH00095 3 ILIFLILFFFFFLLLFILFLP---FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 92 LILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISWMLNFGswnyif 171
Cdd:MTH00095 80 FVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS------ 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 172 yYDFISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGLLF 251
Cdd:MTH00095 154 -YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 252 FGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFM 331
Cdd:MTH00095 233 IGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNY 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 332 GGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLFyysMSGDNNFSV 411
Cdd:MTH00095 313 SNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLW---KSFFLSFSK 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 412 VSSYNDSGYYISFGMFLLLIVVVFggsFLSWLIFPMPYMISLPFYLKLLTIFVVclgsylgyliskLSISYNLFSFNYSN 491
Cdd:MTH00095 390 VVNVYSSSVLMNFLSLMLVFFSVF---FLWWLNFNLLNLPSLFLYLDFYVPLFY------------LFMIMLFSFFFFKL 454
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 470235850 492 LVSFIGSMWFMPFLTTKIISYLPlkigyiSFKYFDFGWGEF-FGGQGFYSFFVYLINYLCSWYDLNFSSYLLIFVFWMF 569
Cdd:MTH00095 455 LFKELKYKFFVDYFAKNVIYKLK------NLKFFDLFLNKFgYKGFNFFSSFSFFFFSYMKSFKYNSLLILLFLIFLFL 527
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
53-575 |
2.53e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 192.48 E-value: 2.53e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 53 LLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQ 132
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 133 NVSSYNAGMLTAL-SNRVGDVSILISISWM------LNFGSWNYIFYYDFISDNNE------------MSIITLLIILAA 193
Cdd:MTH00032 156 TRIQANKAAIKAIvVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRGYygggayesplapFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 194 MTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGLL-FFGCITMFMSGLGANFEFDLKK 272
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 273 IIALSTLSQLGLMMGVLAM-GYSDLAFFHLLTHALFKALLFMCAGSMIHNLK-GIQDIRFMGGIVNSMPLTSICFNVSSL 350
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 351 SLCGIPFLTGFYSKDLILELTCL------------------------------------SYMNYFIFLLYFISTGLTASY 394
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 395 SFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSW-----LIFPMPYMISLPFyLKLLTIFVVCLGS 469
Cdd:MTH00032 476 SIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYliqdiLIGDIEHPIVPPL-IKVMPTLMGLFGM 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 470 YLGYLISKLSISYNLFSFNYS-------NLVSFIGSMWFMPFLTTKIISYLPLKIGYI-SFKYFDFGWGEFFGGQGFYSF 541
Cdd:MTH00032 555 GLCLWAQKGTREGELYWGFDPigpsfllSIYSFLGGAWQGDHLINKLVAIPLFSFGHWgIYKTLDRGWLELFGPQGISTI 634
|
570 580 590
....*....|....*....|....*....|....
gi 470235850 542 FVYLINYLCSWYDLNFSSYLLIFVFWMfvlIIFL 575
Cdd:MTH00032 635 ALRVSQFISNLQSGVISRYALVLLSFT---IIFL 665
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-387 |
6.01e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 179.43 E-value: 6.01e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 107 SPNLISILLGWDGLGLVSYCLVIYY-QNVSSYNAGMLTALSNRVGDVSILISISWMLNFGSWNYIF----YYDFISDNNE 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 182 MSIITLLIILAAMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGIYLLIRFSPMLSFFNLGWGLLFF--GCITMF 258
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQQILLilAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 259 MSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYS---DLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMGGIV 335
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 470235850 336 NSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFIS 387
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-401 |
8.15e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 164.16 E-value: 8.15e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 52 TLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYY 131
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 132 QNVSSYNAGMLTALSNRVGDVSILISISWM-LNFGSWNYIFYYDFISDNNE--MSIITLLIILAAMTSSAQIPFSSWLPA 208
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAELDPglLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 209 AMA-APTPVSALVhSSTLVTAGIYLLIRFS----PMLSFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLG 283
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLtllfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 284 LMMGVLAMGYSDL---AFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTG 360
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 470235850 361 FYSKDLILElTCLSYMNYFIFLLYFISTGLTASYSFRLFYY 401
Cdd:COG0651 389 FVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
72-424 |
1.87e-44 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 168.15 E-value: 1.87e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 72 LVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVSSYNAGMLTALSNRVG 150
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 151 DVSILISIS---WMLNFGSWNYIF--YYDFISDNNEMS----IITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVH 221
Cdd:CHL00025 186 DFGLLLGILgfyWITGSFEFRDLFeiFNNLIYNNEVNLlfatLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIH 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 222 SSTLVTAGIYLLIRFSPMLSFFNLGWGLL-FFGCITMFmsgLGANFEF---DLKKIIALSTLSQLGLMMGVLAMGYSDLA 297
Cdd:CHL00025 266 AATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITAL---LGATLALaqkDIKRGLAYSTMSQLGYMMLALGIGSYRAA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 298 FFHLLTHALFKALLFMCAGSMIHNLKGI--------QDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE 369
Cdd:CHL00025 343 LFHLITHAYSKALLFLGSGSVIHSMEPIvgyspdksQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN 422
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 470235850 370 LTCLsYMNYFIFLLYFiSTGLTASYSFRLFYYSMSGD---NNFSVVSSYNDSGYYISF 424
Cdd:CHL00025 423 DSWL-YSPIFAIIAWS-TAGLTAFYMFRIYLLTFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-369 |
2.52e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 168.17 E-value: 2.52e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 54 LFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQN 133
Cdd:PRK12647 61 LLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 134 VSSYNAGMLTALSNRVG-------------DVSILISISWMLNFGswnyifyyDFISDNNEMSIITLLIILAAMTSSAQI 200
Cdd:PRK12647 141 REAARRAALQALLVTGGgglallaglillgNVTGTYSLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQF 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 201 PFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNL-GWGLLFFGCITMFMSGLGANFEFDLKKIIALSTL 279
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 280 SQLGLMMGVLAMGySDLA----FFHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGI 355
Cdd:PRK12647 293 SALGTLVMLLGLG-SELAikaaVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
330
....*....|....
gi 470235850 356 PFLTGFYSKDLILE 369
Cdd:PRK12647 371 PPLFGFLAKELIYE 384
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
45-398 |
2.92e-44 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 169.07 E-value: 2.92e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 45 NGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVS 124
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 125 YCLvIYYQNVSSYNAGMLTALSNRVGDVSILISISWMLN-FGSWNY--IFYYDFISDNNEM-SIITLLIILAAMTSSAQI 200
Cdd:PRK12650 147 FFL-IARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATqTGTTSLsgILHSDVWAEKPGLtTVVAVLIAVAAFTKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 201 PFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSfFNLGWGLLFFGC--ITMFMSGLGANFEFDLKKIIALST 278
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIVgmITALMGAVFAVQKTDLKKLTAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 279 LSQLGLMMGVLAMGySDLAF----FHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCG 354
Cdd:PRK12650 305 VSQLGWIVATIGVG-TPFALtaavVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAA 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 470235850 355 IPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTA----SYSFRL 398
Cdd:PRK12650 383 VPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARL 430
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
52-371 |
9.32e-41 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 158.09 E-value: 9.32e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 52 TLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYY 131
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 132 -QNVSSYNAGMLTALSNRVGDVSILISISWML----NFGSWNYIFYYDFISDNNEMSIITLLIILAAMTSSAQIPFSSWL 206
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 207 PAAMAAPTPVSALVHSSTLVTAGIYLLIRFSP-MLSFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLM 285
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 286 MGVLAMGYSDL----------------AFFHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTSICFNVSS 349
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|..
gi 470235850 350 LSLCGIPFLTGFYSKDLILELT 371
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAEA 410
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-369 |
2.20e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 157.39 E-value: 2.20e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 52 TLLFDWMSLIFLSFVIYISSLVIYYSEDYML-GEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 131 Y-QNVSSYNAGMLTALSNRVGDVSILISISwMLNFGSWNYIFYyDFISDNNE---MSIITLLIILAAMTSSAQIPFSSWL 206
Cdd:PRK12644 149 YaERAASRRAALQALLVTTAGGLAMLVGII-ILGQAAGTYRLS-ELLADPPTgpaVSVAVVLILVGALSKSAIVPFHFWL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 207 PAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFnLGWG--LLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK12644 227 PGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADV-PVWRptVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 285 MMGVLAMGYSDLAFFHL---LTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGF 361
Cdd:PRK12644 306 LTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGF 384
|
....*...
gi 470235850 362 YSKDLILE 369
Cdd:PRK12644 385 VAKEAALE 392
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
185-397 |
5.55e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 156.12 E-value: 5.55e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 185 ITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLS----FFnlgWGLLFFGCITMFMS 260
Cdd:PRK12648 209 ALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAgteeWF---WIVGGAGLITLLLG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 261 GLGANFEFDLKKIIALSTLSQLGLMMGVLAMGySDLA----FFHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVN 336
Cdd:PRK12648 286 AYFALFQHDLKGLLAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRR 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 470235850 337 SMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTC----LSYMNYFIFLLYFISTGLTASYSFR 397
Cdd:PRK12648 364 LMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLdthlLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
53-403 |
2.67e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 153.76 E-value: 2.67e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 53 LLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEK-NINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIY- 130
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 131 YQNVSSYNAGMLTALSNRVGDVSILISISWMLNFGSWNYIF----YYDFISDNNEMSIITLLIILAAMTSSAQIPFSSWL 206
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 207 PAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNL-GWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLM 285
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 286 MGVLAMG--------------YSDLAF---FHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTSICFNVS 348
Cdd:PRK12646 314 MAMVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIA 392
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 470235850 349 SLSLCGIPFLTGFYSKDLILE-LTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSM 403
Cdd:PRK12646 393 ALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASIFTFTYAL 448
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
394-575 |
1.90e-37 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 136.91 E-value: 1.90e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 394 YSFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGY 473
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 474 LISKLSISYNLFSFNYsNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFGWGEFFGGQGFYSFFVYLINYLCSWY 553
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 470235850 554 DLNFSSYLLIFVFWMFVLIIFL 575
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
13-492 |
1.29e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 143.10 E-value: 1.29e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 13 SLFLISSLFFILGINFLIFDYSIFVEWELFSLNGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFIL 92
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 93 ILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISWmlnfgswNYIFY 172
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-------SCWGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 173 YDFIsdnnemsIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGLLFF 252
Cdd:MTH00063 154 SGSF-------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 253 GCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLKGIQDIRFMG 332
Cdd:MTH00063 227 LLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVY 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 333 GIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYSFRLfyysmsgdnnFSVV 412
Cdd:MTH00063 307 SSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL----------CLIL 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 413 SSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPM-PYMISLPFYLKLLTIFVVCLGSYLGYLISklsiSYNLFSFNYSN 491
Cdd:MTH00063 377 FGVKSSLSSGVRFLFFNSGLMVFLWLFINYYVFLLlDEVVYLGVFISLVLLLVQLLGLLVGVLFY----DSNLFSNWSSS 452
|
.
gi 470235850 492 L 492
Cdd:MTH00063 453 L 453
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
52-405 |
1.91e-35 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 141.99 E-value: 1.91e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 52 TLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEK-NINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 131 YQNVSSYNAGMLTALSNRV-GDVSILISISWM-LNFGSWN---YIFYYDFISDNNEMSIITLLIILAAMTSSAQIPFSSW 205
Cdd:PRK12645 153 WYEREASRYGAQKSMLITVfGGLSMLGGFILLyIMTGSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 206 LPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLG-WGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK12645 233 LPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWfWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 285 MMGVLAMGYSDL----------------AFFHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTSICFNVS 348
Cdd:PRK12645 313 IMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIG 391
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 470235850 349 SLSLCGIPFLTGFYSKDLILE---------LTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSG 405
Cdd:PRK12645 392 ALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
16-368 |
4.32e-35 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 138.18 E-value: 4.32e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 16 LISSLFFILGINFLIFDY----SIFVEWELFSLnGSLVVMTLLFDWMSLIFLSFVIYISSLVIYYSEDYML-------GE 84
Cdd:PRK06525 31 VLFAALTTLCMLSLAYAFyqagKVAVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 85 KNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISWMLNF 164
Cdd:PRK06525 110 EGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQ 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 165 GSWNYIFYYDFISDNnEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFF- 243
Cdd:PRK06525 190 TGTFALSALSGLHGS-LKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIp 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 244 -NLGWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGY--SDLAF----FHLLTHALFKALLFMCAG 316
Cdd:PRK06525 269 hVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAG 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 470235850 317 SMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLIL 368
Cdd:PRK06525 349 ALSYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-369 |
5.44e-32 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 131.49 E-value: 5.44e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 55 FDWMSLIFLSFVIYISSL--------------VIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGL 120
Cdd:PRK12649 64 ISWLPSAGVEFSIYADGLavligliasgigviIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELT 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 121 GLVSYCLVIYYQN--VSSYNAG---MLTALSNRVGDVSILISISWMLNFGSWNYIFYYDFISD--NNEMSIITL-LIILA 192
Cdd:PRK12649 144 SITSFMLIGYWRHrpESVYGATkslLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikGHPLFLITLiLIFIG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 193 AMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNlGWGLLF--FGCITMFMSGLGANFEFDL 270
Cdd:PRK12649 224 AAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 271 KKIIALSTLSQLGLMMGVlaMGYSD---------LAFFHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLT 341
Cdd:PRK12649 303 KAILAYSTISQLAYLMTM--YGYTTyhepglgvaAATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPIT 379
|
330 340
....*....|....*....|....*...
gi 470235850 342 SICFNVSSLSLCGIPFLTGFYSKDLILE 369
Cdd:PRK12649 380 FIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-401 |
3.20e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 123.84 E-value: 3.20e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 184 IITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFspMLSFF--------NLGWGLLFFGCI 255
Cdd:PRK08375 203 TAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRI--YFTVFggdfrfalGLGWLLAVLALL 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 256 TMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDL---AFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMG 332
Cdd:PRK08375 281 SMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELS 359
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 470235850 333 GIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYfISTGLTASYSFRLFYY 401
Cdd:PRK08375 360 GLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLL-ASSLLALLYFLRIWYR 427
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
58-317 |
1.67e-25 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 110.17 E-value: 1.67e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 58 MSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNvssY 137
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPD---R 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 138 NAGMLTA----LSNRVGDVSILISIS-WMLNFGSWNY---IFYYDFISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAA 209
Cdd:PRK08168 147 PFARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 210 MAAPTPVSALVHSStLVTAGIYLLIRFSPMLSFFNLG-WGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGV 288
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*....
gi 470235850 289 LAMGYSDLAFFHLLTHALFKALLFMCAGS 317
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
51-369 |
5.34e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 109.44 E-value: 5.34e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 51 MTLLFDWMSLIFLSFVIYISSLVIYYSEDY---MLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCL 127
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 128 VIY-YQNVSSYNAGMLTALSNRVGDVSI-LISISWMLNFGSWNYIFYYdfiSDNNEMSIITLLIILAAMTSSAQIPFSSW 205
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 206 LPAAM-AAPTPVSALVhSSTLVTAGIYLLIRFSPMLSFFNLGWG--LLFFGCITMFMSGLGANFEFDLKKIIALSTLSQL 282
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 283 GL-MMGV-------------LAMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVS 348
Cdd:PRK08667 307 GIiLMGIglyvifgvygldtLALLALGGALFHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 470235850 349 SLSLCGIPFLTGFYSKDLILE 369
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
100-368 |
1.23e-24 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 108.44 E-value: 1.23e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 100 SMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSS-YNAGMLTALSNRVGDVSILISISWMlnfgsWNYIFYYDFIS- 177
Cdd:PRK06521 125 SMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYDFAAm 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 178 -----DNNEMSIITLLIILAAMTSSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGIYLLIRFS-PMLSFFNLGWG-- 248
Cdd:PRK06521 200 raahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfDLLGAPGWWWGvl 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 249 LLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLM-MGV-LAM-----GYSDLA-------FFHLLTHALFKALLFMC 314
Cdd:PRK06521 279 VLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIfVGLgLAMvfiayGMPLLAalaltaaLYHLLNHALFKSLLFLG 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 470235850 315 AGSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLIL 368
Cdd:PRK06521 359 AGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-442 |
9.56e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 104.79 E-value: 9.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 56 DWMSLIFLSFVIYISSLVIYYSEDYMLGEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNV- 134
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 135 SSYNAGMLTALSNRVGDVSILISISWML-NFGSWNYIFYYDFISDNN---EMSIITLLIILAAMTSSAqIPFSSWLPAAM 210
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPtvvAKIALALFIAGLAMKSGA-VPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 211 -AAPTPVSALVHSSTLvtAGIYLLIR-----FSPMLSFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 285 MM-----GVLAMGYSDL----------AFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSS 349
Cdd:PRK08376 326 MLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 350 LSLCGIPFLTGFYSKDLILELTCLsyMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFSVVSSyNDSGYYISFGMFLL 429
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNV-KEPPKPMLVPMLIL 481
|
410
....*....|...
gi 470235850 430 LIVVVFGGSFLSW 442
Cdd:PRK08376 482 AIAIIGMGLFPWQ 494
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
145-363 |
4.07e-23 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 103.45 E-value: 4.07e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 145 LSNRVGDVSILISISWMLNF-GSWNYIFYYDFIS----DNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSAL 219
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtanlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 220 vHSSTLVTAGIYLLIRFSPMLSFFNLGWG-LLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAF 298
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSPVALTvLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 470235850 299 FHLLTHALFKALLFMCAGSMIHNLKGiQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYS 363
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-443 |
5.04e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 99.66 E-value: 5.04e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 184 IITLLIILAAMTSSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGIYLLIRF--------SPMLSF-FNLGWGLLFFG 253
Cdd:PRK12667 224 VALALALWAFTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFrAALSPILIILG 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 254 CITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYS---DLAFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRF 330
Cdd:PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAA-GTRDIDE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 331 MGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILElTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFS 410
Cdd:PRK12667 382 LAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFN-ALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSG 460
|
250 260 270
....*....|....*....|....*....|...
gi 470235850 411 VVSSYNDSgYYISFGMFLLLIVVVFGGSFLSWL 443
Cdd:PRK12667 461 EEVEHKES-PSMSVVILVLALAVLILGILALFL 492
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-411 |
7.90e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 98.74 E-value: 7.90e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 60 LIFLSFVIYISSLVIYYSEDYMLGE--KNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYYQNVSSY 137
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 138 NAG-------MLTALSNRVGDVSILISISWMLNFGSWNyIFYYDfisdnneMSIITLLIILAAMTSSAQIPFSSWLPAAM 210
Cdd:PRK06589 166 SGGykylkilMISALLLFLPAVILIYTKTGNLDFVSGG-LFSKN-------QSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 211 AAPTPVSALVHSSTLVTAGIYLLIR-------FSPMLSFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLG 283
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 284 L------MMGVLAMGysdLAFFHLLTHALFKALLFMCAGSmIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPF 357
Cdd:PRK06589 318 LallsafILTPKALG---AAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 470235850 358 LTGFYSKDLILELTCLS---YMNYFIFLLYFISTGLTASYSFRLFY--YSMSGDNNFSV 411
Cdd:PRK06589 394 FSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILSsiYKPSLSENSFI 452
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-452 |
4.36e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 96.56 E-value: 4.36e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 188 LIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLsfFNLGWGLLFFGCITMFMSGLGANFE 267
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV--PGLDLIVRIFGVGTALLGVLFALLE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 268 FDLKKIIALSTLSQLGLMMGVLAMGysdlAFFHlLTHALFKALLFMCAGSmIHNLKGIQDIRFMGGIVNSMPLTsicfnV 347
Cdd:PRK07234 267 KDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLT-----M 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 348 SSLSLCGIPFLTGFYSKDLILEltclSYMNYFIFLLYfISTGLTASYSFRLFYYSMSGDNNFSVVSSyndsgyyisfgMF 427
Cdd:PRK07234 336 ASFSIAGFPLLAGFVSKVLTLK----NLLPWQAIALN-LAAVGTAASFWKFIFLPFSADDEDKKPLP-----------GF 399
|
250 260
....*....|....*....|....*
gi 470235850 428 LLLIVVVFGGSFLSWLIFPMPYMIS 452
Cdd:PRK07234 400 WNAIALLLGGLFLANGVYTEAYTLG 424
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
188-398 |
2.80e-20 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 94.06 E-value: 2.80e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 188 LIILAAMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGIYLLIR----FSPMLSFFNLGWGLLFFGCITMFMSGL 262
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilylMQNANGWSSVLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 263 GANFEFDLKKIIALSTLSQLGLMMGVLAMGYS---DLAFFHLLTHALFKALLFMCAGSMIHNLKGIQdIRFMGGIVNSMP 339
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 470235850 340 LTSICFNVSSLSLCGIPFLTGFYSKDLILeLTCLSYMNYFIFLLYFISTGLTASYSFRL 398
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
181-317 |
1.12e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 89.32 E-value: 1.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 181 EMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGIYLLIRFSPMlsfFNLGWG---LLFFGCITM 257
Cdd:PRK08601 202 EKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPL---FHDDIAqilLLIFASISV 277
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 470235850 258 FMsGLGANF-EFDLKKIIALSTLSQLGLMMGVLAMGYSDLAFFHLLTHALFKALLFMCAGS 317
Cdd:PRK08601 278 LI-GTGISLvQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
110-368 |
1.57e-18 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 89.18 E-value: 1.57e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 110 LISILLGWDGLGLVSYCLVIYYQNVSSYNAGMLTALSNRVGDVSILISISW-MLNFGSWnyifyyDFISDNNEMSIITLL 188
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 189 IILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPmlsffnlGWGLLFFGCITMFMSGLG-ANFE 267
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIYIGAAMAVYGVFfALLE 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 268 FDLKKIIALSTLSQLGLMMGVLAMGySDL----AFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMGGIVNSMPLTSI 343
Cdd:PRK12668 262 NDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLYRT-GTEKLTELGGLYRSMPLTAL 339
|
250 260
....*....|....*....|....*
gi 470235850 344 CFNVSSLSLCGIPFLTGFYSKDLIL 368
Cdd:PRK12668 340 FCLVGALSISAFPLFSGFVSKSMII 364
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
201-444 |
9.16e-18 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 86.29 E-value: 9.16e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 201 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGIYLLIRFS-PML--SFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIAL 276
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 277 STLSQLGLM-MGVLAMGYSDL--AFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLC 353
Cdd:COG1008 306 SSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRT-HTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 354 GIPFLTGFYSKDLILELTCLSYMNYFIFLLyfISTGLTASYSFRLFYYSMSGDNNfSVVSSYNDSGYYISFGMFLLLIVV 433
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAA--LGLILTAAYLLWMYQRVFFGPLK-EELAELPDLNPRELAVLAPLAALI 461
|
250
....*....|.
gi 470235850 434 VFGGSFLSWLI 444
Cdd:COG1008 462 LLLGLYPQPLL 472
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-361 |
4.18e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 84.49 E-value: 4.18e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 200 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRFSPMLSFFNLGWG--LLFFGCITMFMSGLGANFEFDLKKIIAL 276
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWGvaLLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 277 STLSQLGLMMGVLAMGYSDLA--------------FFHLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTS 342
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 470235850 343 ICFNVSSLSLCGIPFLTGF 361
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-436 |
7.55e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 83.46 E-value: 7.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 182 MSIITLLIILAAMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGIYLLIRFSPMLSFFNLGWG---LLFFGCITM 257
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFThylILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 258 FMSGLGANFEFDLKKIIALSTLSQLGLM-MGVLAMGYSDL--AFFHLLTHALFKALLFMCAGSMIHnLKGIQDIRFMGGI 334
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGVAMMTESGMigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 335 VNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTcLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFSVVSS 414
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT-FEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGYDLNN 444
|
250 260
....*....|....*....|..
gi 470235850 415 YNDSGYYISFGMFLLLIVVVFG 436
Cdd:PRK07691 445 KVPVKKLLLPAVVLVAITILYG 466
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
178-436 |
3.30e-16 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 81.53 E-value: 3.30e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 178 DNNEMSIITLLIILAAMTSSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWG---LLFFGC 254
Cdd:PRK12663 202 DTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLhplLATMAA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 255 ITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDL---AFFHLLTHALFKALLFMCAGSMIHnLKGIQDIRFM 331
Cdd:PRK12663 281 ITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYL 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 332 GGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSymNYFIFLLYFISTGLTASYS-FRLFYYSMSGDNNFS 410
Cdd:PRK12663 360 GGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSlFRIFFLAYWGDKDGE 437
|
250 260
....*....|....*....|....*.
gi 470235850 411 VVSSYNDSGYYISFGMFLLLIVVVFG 436
Cdd:PRK12663 438 EVNFKPIPLYRKLPLSILAVVVIAMG 463
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
184-400 |
1.10e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.96 E-value: 1.10e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 184 IITLLIILAAMTSSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGIYLLIRFS---PMLSFFN----------LGWGL 249
Cdd:PRK08668 197 IVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLyvlPGTKLFSefgtyrgvplFNYIL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 250 LFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGYS---DLAFFHLLTHALFKALLFMCAGSMIHNlKGIQ 326
Cdd:PRK08668 276 AWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTT 354
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 470235850 327 DIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTAsYSFRLFY 400
Cdd:PRK08668 355 KISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL-YVFRPLA 427
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-440 |
2.85e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.19 E-value: 2.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 201 PFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRFSpMLSFFNLGWG-----LLFFGCITMFMSGLGANFEFDLKKII 274
Cdd:PRK06458 232 PMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIGSDfpgrlLLIFGLLSVLVAAFFLLRQRDIKRLF 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 275 ALSTLSQLGLMMGVLAMGySDLAFF----HLLTHALFKALLFMCAGSMIHNlKGIQDIRFMGGIVNSMPLTSICFNVSSL 350
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLGAL 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 351 SLCGIPFLTGFYSKDLILELTC-LSYMNYFIFLLYFISTGLTAsySFRLFYYSMSGDNNFSVvsSYNDSGYYISFGMFLL 429
Cdd:PRK06458 388 AIAGMPPFGVFISEFLILTAGLaRGPLLIAILLLLLLTLAFAA--LVRRVAGMVFGEPPEAV--NRGDLGWLTTSPMFVH 463
|
250
....*....|.
gi 470235850 430 LIVVVFGGSFL 440
Cdd:PRK06458 464 LVLVLVLGLYI 474
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
200-447 |
3.89e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.43 E-value: 3.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 200 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRFS-PML--SFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIA 275
Cdd:TIGR01972 220 FPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 276 LSTLSQLGL-MMGVLAMGYSDL--AFFHLLTHALFKALLFMCAGsMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSL 352
Cdd:TIGR01972 299 YSSISHMGFvLLGIFSFNELGIsgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMAS 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 353 CGIPFLTGFYSKDLIleLTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIV 432
Cdd:TIGR01972 378 LGLPGTSGFVGEFLI--LLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLVVL 455
|
250
....*....|....*
gi 470235850 433 VVFGGSFLSWLIFPM 447
Cdd:TIGR01972 456 ILFLGLYPNPLLDLT 470
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
198-369 |
3.19e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 65.76 E-value: 3.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 198 AQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGIYLLIRFSPML----SFFNLgwgLLFFGCITMFMSGLGANFEFDLKK 272
Cdd:PRK12665 224 AVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfpggGLDTL---LMVVALLTMVVGILGAIAQSDIKR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 273 IIALSTLSQLGLMMGVLAM----GYSDlAFFHLLTHALFKALLFMCAGsMIHNLKGIQDIRFMGGIVNSMPLTSICFNVS 348
Cdd:PRK12665 300 LLSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVP 377
|
170 180
....*....|....*....|.
gi 470235850 349 SLSLCGIPFLTGFYSKDLILE 369
Cdd:PRK12665 378 ALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
200-436 |
3.55e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 65.61 E-value: 3.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 200 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGIYLLIRFS-PML--SFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIA 275
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlPLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 276 LSTLSQLG-LMMGVLAMGYSDL--AFFHLLTHALFKALLFMCAGSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSL 352
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRL-HTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 353 CGIPFLTGFYSKDLILeltcLSYMNYFIFLLYFISTG--LTASYSFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLL 430
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL----LGSFQVNPVIAFIATTGliLAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVA 461
|
....*.
gi 470235850 431 IVVVFG 436
Cdd:PRK05846 462 LLLLLG 467
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-364 |
4.98e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 65.14 E-value: 4.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 14 LFLISSLFFILGINFLIFDYSIFVEwelFSLNGSLVVmtllfDWMSLIFLSFVIYISSLVIYYSEDYmLGEKNINR--FI 91
Cdd:COG1007 35 LAGLALLGLLLALALLLLALGGGTG---TAFGGMFVV-----DGFALFFKLLILLAALLVLLLSRDY-LERRGLLRgeFY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 92 LILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLV-IYYQNVSSYNAGM----LTALSNRVgdvsILISISWMLNF-G 165
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 166 SWNYIFYYDFISDNNEMS---IITLLIILAAM---TSSAqiPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGIYLLIR-F 236
Cdd:COG1007 182 SLNLAGIAAALAAGGANSpllLLGLVLVLAGLafkLSAV--PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 237 SPMLSFFNLGWGLLF--FGCITMFMSGLGANFEFDLKKIIALSTLSQLG-LMMGVLAMGYSDL--AFFHLLTHALFKALL 311
Cdd:COG1007 258 VEAFPGLAADWQLLLavLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGyLLLGLAAGTPLGVsaALFYLLAYLFMNLGA 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 470235850 312 FMCAGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSK 364
Cdd:COG1007 338 FAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
176-450 |
1.33e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 1.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 176 ISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIR-----FSPMLSFFNLGWG-- 248
Cdd:PRK12662 202 LPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTLPFNnv 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 249 LLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMG-YSDL--AFFHLLTHALFKALLFMCAGSMIHNLkGI 325
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GT 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 326 QDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSymNYFIFLLYF-ISTGLTASYSFRLFYYSMS 404
Cdd:PRK12662 361 TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLlVGSGLSVIYVWKIVEALYF 438
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 470235850 405 gdNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSwlIFPMPYM 450
Cdd:PRK12662 439 --ESRMVESKANDKAFKTPNAMVLCIWIMAILSIIVG--IYPIPLT 480
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-368 |
2.81e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 56.30 E-value: 2.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 187 LLIILAAMTSSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRFSPML----SFFNLGWGLLFFGCITMFMSG 261
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 262 LGANFEFDLKKIIALSTLSQLGLMMGVLAMGYSDLAF---FHLLTHALFKALLFMCAGsMIHNLKGIQDIRFMGGIVNSM 338
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190
....*....|....*....|....*....|
gi 470235850 339 PLTSICFNVSSLSLCGIPFLTGFYSKDLIL 368
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
171-394 |
3.02e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 56.26 E-value: 3.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 171 FYYDFISDNNeMSIITLLIILAAMTSSAQI-----PFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSpmLSFFNL 245
Cdd:PRK07363 189 FDYDAISTQN-LSLNTQLILLTGLLLGFGIkiplvPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQ 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 246 GW-----GLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMGySDLAFF----HLLTHALFKALLFMCAG 316
Cdd:PRK07363 266 TWslvapGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG-TQLSLLgavaQMISHGLILALLFHLVG 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 317 sMIHNLKGIQDIRFMGGIVN---SMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMnyFIFLLYFISTGLTAS 393
Cdd:PRK07363 345 -IVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFP--IPTLLCIVASGLTAV 421
|
.
gi 470235850 394 Y 394
Cdd:PRK07363 422 Y 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
200-394 |
1.79e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 53.94 E-value: 1.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 200 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGIYLLIRFSpmLSFFNLGW-----GLLFFGCITMFMSGLGANFEFDLKKI 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSVLYGASCAIAQKDMKKM 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 274 IALSTLSQLG--LMMGVLAMGYSDL-AFFHLLTHALFKALLFMCAGsMIHNLKGIQDIRFMGGIVN---SMPLTSICFNV 347
Cdd:PRK06473 299 VAYSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNperGLPITGSLMIL 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 470235850 348 SSLSLCGIPFLTGFYSKDLILEltclsyMNYFIF----LLYFISTGLTASY 394
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLVFR------GSFPIFpvqtLLCMIGTGLTAVY 422
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
19-364 |
3.26e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.90 E-value: 3.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 19 SLFFILGINFLIFD--YSIFVEWELFSLNGSLVVmtllfDWMSLIFLSFVIYISSLVIYYSEDYmLGEKNINRFILILLL 96
Cdd:PRK05777 38 ATLAVLALLLALVAllFVLGAAGGGTAFGGMLVV-----DGFALFLKGLILLASLLALLLARPY-LEDRGRGEFYLLVLF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 97 FILSMFFLIISPNLISILLGWDGLGLVSYCLVIY-YQNVSSYNAGM----LTALSNRVgdvsILISISwMLNFGSWNYIF 171
Cdd:PRK05777 112 ALLGMMVMVSANDLLTLFLGLELLSLPLYALAALrRDRRRSLEAAIkyfvLGALASGF----LLYGMS-LLYGATGSLSF 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 172 YYDFISDNNEMSIITLLIILAAMTSSA------QIPFSSWLPAAM-AAPTPVSALVHSSTLVtAGIYLLIRFSpMLSFFN 244
Cdd:PRK05777 187 AGIAKALADGSGNSLLLLFGLVFLLVGlafklsAVPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLL-VVAFGG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 245 LGWG----LLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLG-LMMGVLAMGYSDL--AFFHLLTHALFKALLFMCAGS 317
Cdd:PRK05777 265 LSEDwqqvLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISL 344
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 470235850 318 MIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSK 364
Cdd:PRK05777 345 LRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGK 391
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-402 |
4.68e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 52.43 E-value: 4.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 183 SIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGIYLLIrfspMLSFFNLGWGLLFFGCITMFMSGL 262
Cdd:PRK12664 144 GYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGII 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 263 GANFEFDLKKIIALSTLSQLGLMMGVLAMGYS-----DLAFFHLLTHALFKALLFMCAGSMIHNLKGIqDIRFMGGIVNs 337
Cdd:PRK12664 218 FASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSsgvaiGILILQIVLSVVYQTLLFMVADSVINRTRKF-NLNRVGGLFK- 295
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 470235850 338 MPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIF--LLYFISTGLTASYSFRLFYYS 402
Cdd:PRK12664 296 MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYkkLFLICSLLLFASVGLKFFWYA 362
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
16-364 |
5.52e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 52.31 E-value: 5.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 16 LISSLFFILGINfLIFDYSIFVEWELFSLNG-SLVVMTLLFDW----------------MSLIFLSFVIYISSLVIYYSE 78
Cdd:CHL00049 22 LIFGLILLLMID-LTSDQKDIPWLYFISSTSlVMSITALLFQWreepmisfsgnfqtnnFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 79 DYML-GEKNINRFILILLLFILSMFFLIISPNLISILLGWDGLGLVSYCLVIYY-QNVSSYNAGMLTALSNRVGDVSILI 156
Cdd:CHL00049 101 EYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVY 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 157 SISWM--LNFGSWNYIFYYDFISDNNEMSIITLLIILAAMT-----SSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTA 228
Cdd:CHL00049 181 GFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 229 GIYLLIR-FSPMLSFFNLGWGLLF--FGCITMFMSGLGANFEFDLKKIIALSTLSQLG-LMMGVLAmGYSDLAFFHLLTH 304
Cdd:CHL00049 260 ASALATRiFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGyVIIGIIV-GDSNDGYASMITY 338
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 470235850 305 ALFkaLLFMCAGS----MIHNLK-GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSK 364
Cdd:CHL00049 339 MLF--YIFMNLGTfaciVLFGLRtGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
224-369 |
9.16e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.57 E-value: 9.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 224 TLVTAGIYLLIRFSPMLSFFNLGWGLLFFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLAMG--YSDLA-FFH 300
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtpLGIVAgIFH 323
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 470235850 301 LLTHALFKALLFMCAGSmIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE 369
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
201-363 |
1.19e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.10 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 201 PFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRFS-PMLSFFNLGWG--LLFFGCITMFMSGLGANFEFDLKKIIAL 276
Cdd:PRK12561 203 PLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvQMLPDAHVYFApaLAILGVVNIIYGALNAFAQDNVKRRLAY 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 277 STLSQLG-LMMGVLAmgYSDL----AFFHLLTHALFKALLFMCAGSMIHNLKGIQdIRFMGGIVNSMPLTSICFNVSSLS 351
Cdd:PRK12561 282 SSVSHMGfVLLGIAA--FTDLgisgAMLQMISHGLIAAALFFLTGVTYERTHTLS-IPNMGGLAKVMPKTFALFTASSMA 358
|
170
....*....|..
gi 470235850 352 LCGIPFLTGFYS 363
Cdd:PRK12561 359 SLALPGMSGFVS 370
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
174-396 |
1.55e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.53 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 174 DFISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFS-PMLSFF--NLGWGLL 250
Cdd:MTH00226 221 SHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLGaqNLAPAVI 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 251 FFGCITMFMSGLGANFEFDLKKIIALSTLSQLGLMMGVLA----MGYSDlAFFHLLTHALFKALLFMCAgSMIHNLKGIQ 326
Cdd:MTH00226 301 AMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVthdiIGLTG-SIFIMLAHGIVSSLLFILV-TILYDRHHTR 378
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 470235850 327 DIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKdlilELTCLSYMNYFIFLLYFISTG--LTASYSF 396
Cdd:MTH00226 379 LIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE----YLSILSSFNWNPIIGVFVCSGviLSAVYSF 446
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
22-369 |
2.05e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 44.17 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 22 FILGINFLIFDYSIFVEWELFSLNGSLVVMtLLFDWMSLIFLSFVIYISSLVIYYSEDYMLGEK-NINRFILILLLFILS 100
Cdd:TIGR01770 36 NLSYIVLLSALVSLFLTLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLG 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 101 MFFLIISPNLISILLGWDGLGLVSYCLVIY-YQNVSSYNAGMLTALSNRVGDVSILISISWMLNF-GSWNY----IFYYD 174
Cdd:TIGR01770 115 IFLLVSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFtGSLNFedllLFLSN 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 175 FISDNNEMSIITLLIILAAMTSSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFFNLGWGLLFFG 253
Cdd:TIGR01770 195 GMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAI 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 254 CI--TMFMSGLGANFEFDLKKIIALSTLSQLG-LMMGVLAMGYSDLA--FFHLLTHALFKALLFMCAGSM-IHNLKGIQD 327
Cdd:TIGR01770 275 IAflSMLIGNFGALAQKKVKRLLAYSSISHVGyILIGLLAGTLEGIKavLFYIFIYALMSLGAFGVLSLLrSYKDEWIEY 354
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 470235850 328 IRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE 369
Cdd:TIGR01770 355 ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFF 396
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
198-364 |
2.85e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 43.50 E-value: 2.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 198 AQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGIYLLIRF-SPMLSFFNLGWGLLF--FGCITMFMSGLGANFEFDLKKI 273
Cdd:PRK02504 225 SAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLlVTAFPSFDEQWKLLFtaLAILSMVLGNVVALAQTSMKRM 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 274 IALSTLSQLG-LMMGVLA---MGYSDLAFFHLlthalfkALLFMCAGS----MIHNLK-GIQDIRFMGGIVNSMPLTSIC 344
Cdd:PRK02504 304 LAYSSIGQAGfVMIGLVAgteAGYASMVFYLL-------AYLFMNLGAfacvILFSLRtGTDQISDYAGLYQKDPLLTLG 376
|
170 180
....*....|....*....|
gi 470235850 345 FNVSSLSLCGIPFLTGFYSK 364
Cdd:PRK02504 377 LSLCLLSLGGIPPLAGFFGK 396
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
186-371 |
3.24e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.27 E-value: 3.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 186 TLLIILAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFSPMLSFfNLgwgLLFFGCITMFMSGLGAN 265
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNP-TL---LLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 266 FEFDLKKIIALSTLSQLGLMMGVLAMGySDLAFFHLLTHALFKALLFMcagSMIH-NLKGIQDirfMGGIVNSMPLTSIC 344
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL---TLNTtSTKTLKD---MMTSWTKSPTLNTT 243
|
170 180
....*....|....*....|....*...
gi 470235850 345 FNVSSLSLCGIPFLTGFYSKDLIL-ELT 371
Cdd:MTH00112 244 LMLTLLSLAGLPPLTGFMPKWLILqELT 271
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
199-447 |
1.30e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.59 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 199 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFS-PMLSFFNLGWG--LLFFGCITMFMSGLGANFEFDLKKIIA 275
Cdd:MTH00204 225 QIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAplIVMLSVIAVIYGSLTTCRQVDFKRLIA 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 276 LSTLSQLGLM-MGVLAMGYSDL--AFFHLLTHALFKALLFMcAGSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSL 352
Cdd:MTH00204 305 YSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235850 353 CGIPFLTGFYSKDLILeltcLSYMNYFIFLLYFISTGLTASYSFRLFYY---SMSGDNNFSVVSsyNDSGYYISFGMFLL 429
Cdd:MTH00204 384 MGFPLSCNFVGEFFSL----LAAFEYSLGLGVLVTSGMVWSAAYSLYLYnriSFGGGSNYLLFS--RDLNRRELLAILPL 457
|
250
....*....|....*...
gi 470235850 430 LIVVVFGGSFLSWLIFPM 447
Cdd:MTH00204 458 IIAIFLLGIVPFIIIDLV 475
|
|
| |
