|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
9.20e-151 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 435.74 E-value: 9.20e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLSNSWWVVHSFMFMLCFTFMFCIYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILASGSIY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 81 FYSYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 161 LYFIVNTLYFPLISDLGSFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISY 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 241 LGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 321 IYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 470235851 401 YSQHGMYYSGSYSFSLCYVREYHLLFLHWLPLNIICLMISYFFM 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-444 |
4.85e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 341.05 E-value: 4.85e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 47 LMGYFFGLDYFSFSLILLSFWICSLMILASGSIYFYSYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 127 ILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDLGSFYF---LFYVFMIMAFLVKMPMFIVHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSsmgLWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 204 LPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 284 MVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 364 FGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPLNIICLMISYFF 443
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLF 414
|
.
gi 470235851 444 M 444
Cdd:MTH00150 415 M 415
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-437 |
5.08e-112 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 337.10 E-value: 5.08e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLSNSWWVVHSFMFML---CFTFMFCIYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILASG 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLllsLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 78 SIYFYSYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLI 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 158 LFKLYFIVNTLYFPLISDLGSFYF---LFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYlmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 235 MKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 315 FCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 470235851 395 TLYMYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPLNIICL 437
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILIL 443
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-443 |
4.90e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 321.54 E-value: 4.90e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 5 LFALFFMMPLCFLSNSWWVVHSFMFMLCFTFMFCIYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILASGSIYFYSY 84
Cdd:MTH00205 6 VFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 85 HSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFI 164
Cdd:MTH00205 86 NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 165 VNTLYFPL---ISDLGSFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYL 241
Cdd:MTH00205 166 NFSLSMFFnfpLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 242 GLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNII 321
Cdd:MTH00205 246 NSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 322 YERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMYSY 401
Cdd:MTH00205 326 YERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQ 405
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 470235851 402 SQHGMYYSGSYSFSLCYVREYHLLFLHWLPLNIICLMISYFF 443
Cdd:MTH00205 406 SQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-432 |
6.16e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 311.47 E-value: 6.16e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLSNSWWV-----VHSFMFMLCFTFMFCiYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILA 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLwtlttTNSLIIAFLSLMWFN-LPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 76 SGSIYFYS--YHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLP 153
Cdd:MTH00068 80 SQNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 154 LLLILFKLYFIVNTLYFPLISDLGSFYF------LFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLmtytnkIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 228 GYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 470235851 388 CFFSAVYTLYMYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPL 432
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPM 444
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-432 |
6.51e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 311.36 E-value: 6.51e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLS--NSWW---VVHSFMFMLcFTFMFCIYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILA 75
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSkpKFLWtntTTYSLLIAL-LSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 76 SGSIYFYSYHSG--FFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLP 153
Cdd:MTH00124 80 SQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 154 LLLILFKLYFIVNTLYFPLISDLGSF------YFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 228 GYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGH 307
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFL 387
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 470235851 388 CFFSAVYTLYMYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPL 432
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPL 444
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-435 |
4.61e-98 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 301.51 E-value: 4.61e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLSNSWWVVHSFMFMLCFTFMFCIY-----SYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFllnnhWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 76 SGSIYFYSYHSG--FFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLP 153
Cdd:MTH00044 81 SINHLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 154 LLLILFKLYFIVNTLYFPLI------SDLGSFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSelnwltSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 228 GYGMFRVMKIISYLGLKF-NYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVG 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 470235851 387 LCFFSAVYTLYMYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPLNII 435
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILI 449
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.67e-94 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 292.18 E-value: 1.67e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLSNSWWV-----VHSFMFMLCFTFMFCIYSYSDFNLMGYFFgLDYFSFSLILLSFWICSLMILA 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 76 SGSIYFY--SYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLP 153
Cdd:MTH00110 80 SQHHLSKepLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 154 LLLILFKLY-------FIVNTLYFPLISDLGSFYFLFYVFMiMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKL 226
Cdd:MTH00110 160 LLVALLYIQnnlgslnFLLLQLWAQPLPNSWSNNLLWLACM-MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 227 GGYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVG 306
Cdd:MTH00110 239 GGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIF 386
Cdd:MTH00110 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 470235851 387 LCFFSAVYTLYMYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPLNIICL 437
Cdd:MTH00110 399 NMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-442 |
5.22e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 282.98 E-value: 5.22e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 5 LFALFFMMPLCFLSNSWWVVHSFMFMLCFTFMFCIYSYSDFNLMG--YFFGLDYFSFSLILLSFWICSLMILASGSIYFY 82
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 83 SYHS--GFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFK 160
Cdd:MTH00206 86 EPINrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 161 LYFIVNTLYFPLISDLGSFYF---LFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKI 237
Cdd:MTH00206 166 LQNSLGSLSLYILYFSKLTTWnnnLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 238 ISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 318 SNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 470235851 398 MYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPLNIICLMISYF 442
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-432 |
7.69e-84 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 264.90 E-value: 7.69e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLSNSWW-----VVHSFMFMLCFTFMFCIYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWlwtttLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 76 SGSIYFYSYHSGFFVFI--VIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRQRMYItlLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 154 LLLILFKLYFIVNTL------YFPLISDLGSFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 228 GYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 470235851 388 CFFSAVYTLYMYSYSQHGMYYSGSYSFSLCYVREYHLLFLHWLPL 432
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPL 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
7.68e-53 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 184.13 E-value: 7.68e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 48 MGYFFGLDYFSFSLILLSFWICSLMILASGSiYFYSYHSGFFVFIVIFLMIMLYCSFSSLSLFSfYIFFESSLVPTLFLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWN-EIKKRPKLYYALLLLLEAGMIGVFLALDLFLF-YVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 128 LGWGYqPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFpLISDL------GSFYFLFYVFMIMAFLVKMPMFIVH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELaaaplpLTAQLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 202 LWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMkiisyLGL------KFNYFLISLSLFGGVLISFMCIRQVDLKSLIA 275
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA-----LPLfpeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 276 YSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNM 355
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 470235851 356 AAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMY 399
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-386 |
1.21e-47 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 165.18 E-value: 1.21e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 113 YIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLIS------DLGSFYFLFYVF 186
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltggLNSSGLLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 187 MIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIR 266
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 267 QVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMINLMPGMSF 345
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 470235851 346 WWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIF 386
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
1.32e-46 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 167.69 E-value: 1.32e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 48 MGYFFGLDYFSFSLILLSFWICSLMILASGSIYfySYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEI--KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 128 LGWGYqPERLQAGIYLIFYTLFASLPLLLILFklyfivnTLYFPLISDLGSF---------------YFLFYVFMImAFL 192
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAII-------YLVVVYYNATGTFdiadllnlplppgvqYWLFLAFFI-AFA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 193 VKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMkiisyLGL------KFNYFLISLSLFGGVLISFMCIR 266
Cdd:PRK05846 223 VKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-----LPLfpdashEFAPIIITLGVIAIIYGALVALA 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 267 QVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFW 346
Cdd:PRK05846 298 QTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAF 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 470235851 347 WFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMY 399
Cdd:PRK05846 378 FLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-399 |
4.45e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 166.01 E-value: 4.45e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 51 FFGLDYFSFSLILLSFWICSLMILAS-GSIYFYSYHsgfFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILG 129
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISwKSIKFLFKE---FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 130 WGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTL-YFPLISDLGSFYFLFYVFM--IMAFLVKMPMFIVHLWLPS 206
Cdd:MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQ 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 207 AHVEAPISGSMILAGVLLKLGGYGMFRV-MKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMV 285
Cdd:MTH00204 235 AHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 286 IGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFG 365
Cdd:MTH00204 315 PLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVG 394
|
330 340 350
....*....|....*....|....*....|....
gi 470235851 366 ELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMY 399
Cdd:MTH00204 395 EFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-399 |
5.35e-44 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 160.49 E-value: 5.35e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 50 YFFGLDYFSFSLILLSFWICSLMILASGsiYFYSYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILG 129
Cdd:TIGR01972 71 YHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 130 WGyQPERLQAGIYLIFYTLFASLPLLLILFKLYFI--VNTLYFPLISDLGSF---YFLFYVFMImAFLVKMPMFIVHLWL 204
Cdd:TIGR01972 149 WG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLggGTFDLLELLNLPLPFgvqTWLFLAFFI-AFAVKVPLFPLHTWL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 205 PSAHVEAPISGSMILAGVLLKLGGYGMFRV-MKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMS 283
Cdd:TIGR01972 227 PDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMG 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 284 MVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNL 363
Cdd:TIGR01972 307 FVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
330 340 350
....*....|....*....|....*....|....*.
gi 470235851 364 FGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMY 399
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-399 |
5.51e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 157.52 E-value: 5.51e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 51 FFGLDYFSFSLILLSFWICSLMILAS-GSIYFYSYHsgfFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILG 129
Cdd:MTH00217 75 VFAVDGISIFFLILTALLTPICILISwNSIKFLIKE---FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 130 WGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDL----GSFYFLFYVFMImAFLVKMPMFIVHLWLP 205
Cdd:MTH00217 152 WGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLkiekELQYFIFLGFFL-SLAIKIPKIPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 206 SAHVEAPISGSMILAGVLLKLGGYGMFRV-MKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSM 284
Cdd:MTH00217 231 QAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 285 VIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLF 364
Cdd:MTH00217 311 VTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFV 390
|
330 340 350
....*....|....*....|....*....|....*
gi 470235851 365 GELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMY 399
Cdd:MTH00217 391 GEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
9.37e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 154.69 E-value: 9.37e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 52 FGLDYFSFSLILLSFWICSLMILASGSIYFYSYHSgfFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPtLFLILG-W 130
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKYLTKS--FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIP-MYLILGiW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 131 GYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTL-YFPLISD----LGSFYFLFYVFMIMAFLVKMPMFIVHLWLP 205
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCshvvSEQTQKWIFLGIFLAMAVKIPIFPFHIWLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 206 SAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLK-FNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSM 284
Cdd:MTH00226 255 KAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 285 VIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLF 364
Cdd:MTH00226 335 VSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFI 414
|
330 340 350
....*....|....*....|....*....|....*.
gi 470235851 365 GELSLINSLMSWSIsmfMVLIFLC---FFSAVYTLY 397
Cdd:MTH00226 415 GEYLSILSSFNWNP---IIGVFVCsgvILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
26-419 |
2.05e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 151.60 E-value: 2.05e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 26 SFMFMLCFTFMFCIYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILASGSIYFYSYHSGFFVFIVIFLMIMLYcsfs 105
Cdd:MTH00094 8 SPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSN---- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 106 slsLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLIsdlgsFYFLFYV 185
Cdd:MTH00094 84 ---MLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFF-----LSWEMFF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 186 FMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLglkFNYFLISLSLFGGVLISFMCI 265
Cdd:MTH00094 156 ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 266 RQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSF 345
Cdd:MTH00094 233 FQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGL 312
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 470235851 346 WWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMYSYSQHGMYYSGSYSFSLCYV 419
Cdd:MTH00094 313 IFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-368 |
1.25e-30 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 123.60 E-value: 1.25e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 53 GLDYFSFSLILLSFWICSLMILASGSI-----YFYsyhsgffvfiviFLMIMLYCSFSSLS----LFSFYIFFESSLVPT 123
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKVtrkprLFY------------FLMLVLYSAQIGVFlaqdLLLFFLMWELELVPV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 124 LFLILGWGYQpERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLiSDLG------SFYFLFYVFMIMAFLVKMPM 197
Cdd:PRK12561 124 YLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDL-AELGaksyplALELLLYAGFLIAFGVKLPI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 198 FIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRV-MKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAY 276
Cdd:PRK12561 202 FPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAY 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 277 SSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPgMSFWWFLLSSSNMA 356
Cdd:PRK12561 282 SSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP-KTFALFTASSMASL 360
|
330
....*....|...
gi 470235851 357 APPSLNLF-GELS 368
Cdd:PRK12561 361 ALPGMSGFvSELT 373
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
49-403 |
1.10e-29 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 119.87 E-value: 1.10e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 49 GYFFGLDYFSFSLILLSFWICSLMILAS-GSIYFYSYHSGFFVFIVIFLMIMLyCSFSSLSLFSFYIFFESSLVPTLFLI 127
Cdd:COG0651 69 GIVLVADRLSALFLLLTALVALAVLLYSiGYMRHERRGRRFYPLFLLLLAGMN-GAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 128 LGWGYqPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDLGSFY-----FLFYVFMIMAFLVKMPMFIVHL 202
Cdd:COG0651 148 ALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 203 WLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKII--SYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVA 280
Cdd:COG0651 227 WLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 281 HMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPS 360
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 470235851 361 LNLFGELSLINSLMSWSISMFMVLIFLC-FFSAVYTLYMYSYSQ 403
Cdd:COG0651 387 SGFVSKWLLLQAALEAGAWLLAAVLLLSsLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-358 |
2.28e-23 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 102.48 E-value: 2.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 53 GLDYFSFSLILLSFWICSLMILASGSIyfySYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 133 QpERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLIS----DLG-SFYFLFYVFMIMAFLVKMPMFIVHLWLPSA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 208 HVEAPISGSMILAGVLLKLGGYGMFRV-MKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 470235851 287 GGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAP 358
Cdd:PRK02546 320 IGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
50-357 |
1.07e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 97.46 E-value: 1.07e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 50 YFFGLDYFSFSLILLSFWICSLMILASGSIYfysYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLILG 129
Cdd:PRK06473 73 YHLGVDGLSLPLLVLNSLLTLIAIYSSDESI---QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 130 WGYQpERLQAGIYLIFYTLFASLPLLLILFKLYFIV---NTLYFPLISDL--GSFYFLFYVFMIMAFLVKMPMFIVHLWL 204
Cdd:PRK06473 150 WGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSgasSFDYEPLRSHTlpLSTQLLLLAPILVGFGIKIPLVPFHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 205 PSAHVEAPISGSMILAGVLLKLGGYGMFRV-MKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMS 283
Cdd:PRK06473 229 PDAHVEASTPVSVLLAGVLLKLGTYGLLRFgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 470235851 284 MVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAA 357
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMAS 382
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-401 |
4.51e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 89.17 E-value: 4.51e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 113 YIFFESSLVPTLFLIlGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDLGSF---YFLFYVFMIM 189
Cdd:PRK08375 132 FVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAEnptVVTAFGFVLL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 190 AFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVM----KIISYLGLKFNYFLISLSLFGGVLISFMCI 265
Cdd:PRK08375 211 ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLALLSMLVGSLAAL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 266 RQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSF 345
Cdd:PRK08375 291 GQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAA 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 470235851 346 WWFLLSSSNMAAPPSLNLFGELSLINSLMS-WSISMFMVLIFLCFFSAVYTLYMYSY 401
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-398 |
6.54e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 88.87 E-value: 6.54e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 181 FLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLKFNYF-------LISLS 253
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFraalspiLIILG 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 254 LFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLIN 333
Cdd:PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 470235851 334 KGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLcfFSAVYTLYM 398
Cdd:PRK12667 383 AGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLI--ASAISLVGY 445
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
182-393 |
2.39e-18 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 87.31 E-value: 2.39e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 182 LFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRV-MKIISYLGLKFNYFLISLSLFGGVLI 260
Cdd:CHL00011 212 LFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 261 SFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLM 340
Cdd:CHL00011 292 ASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPM 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 470235851 341 PGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAV 393
Cdd:CHL00011 372 PKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
16-390 |
2.62e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 83.43 E-value: 2.62e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 16 FLSNSWWVVHSFMFMLCFTFMFCI--YSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILASGSIYfySYHSGFFVFIV 93
Cdd:MTH00062 3 FFSVGFFLGFLLLLLFCLLYSSGVgcCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLL--SGVSRFFLFLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 94 IFLMIMLYCSFSSLSLfsfYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLI 173
Cdd:MTH00062 81 LIFSILCFCVNNSLLF---WFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 174 SDLGSFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLkfnYFLISLS 253
Cdd:MTH00062 158 GSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLC 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 254 LFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLIN 333
Cdd:MTH00062 235 CLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLL 314
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 470235851 334 KGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSlmswSISMFMVLIFLCFF 390
Cdd:MTH00062 315 KSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSS----SFGVLVYLLFWCFY 367
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
182-393 |
7.90e-16 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 79.20 E-value: 7.90e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 182 LFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIIS-YLGLKF-NYFLISLSLFGGVL 259
Cdd:PRK06458 215 LAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 260 ISFMCIRQVDLKSLIAYSSVAHMSMV-----IGGLLtmnwwGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINK 334
Cdd:PRK06458 295 AAFFLLRQRDIKRLFAYSSIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIR 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 470235851 335 GMINLMPGMSfWWFLLSSSNMAAPPSLNLF-GELSLINSLMS---WSISMFMVLIFLCFFSAV 393
Cdd:PRK06458 370 GLLKVSPLTG-WGLMLGALAIAGMPPFGVFiSEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
113-357 |
1.37e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 78.60 E-value: 1.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 113 YIFFESSLVPTLFLILGWGYQpERLQAGIYLIFYTLFASLPLLLILFKLYFI----------VNTLYFPLISDLgsfyfL 182
Cdd:PRK07363 133 FLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLsgstsfdydaISTQNLSLNTQL-----I 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 183 FYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMkiisyLGL---KFNYFLISLSLFGGVL 259
Cdd:PRK07363 207 LLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG-----LQLfpqTWSLVAPGLAIIGTIS 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 260 I---SFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:PRK07363 282 ViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGL 361
|
250 260
....*....|....*....|.
gi 470235851 337 INLMPGMSFWWFLLSSSNMAA 357
Cdd:PRK07363 362 MNPIRGLPLTSALLVLAGMAS 382
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
180-341 |
6.87e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.49 E-value: 6.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 180 YFLFYVFMIMAF-LVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGL-----------KFNY 247
Cdd:PRK08668 194 FALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLFNY 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 248 FLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGS 327
Cdd:PRK08668 274 ILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGT 353
|
170
....*....|....
gi 470235851 328 RSLLINKGMINLMP 341
Cdd:PRK08668 354 TKISEMGGLIEKMP 367
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
178-399 |
4.65e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.47 E-value: 4.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 178 SFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKII--SYLGLKFNYFLISLSLF 255
Cdd:PRK08676 203 SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIF 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 256 GGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKG 335
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFD 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 470235851 336 MINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFLCFFSAVYTLYMY 399
Cdd:PRK08676 363 VFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
5-373 |
1.44e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 66.29 E-value: 1.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 5 LFALFFMMPLCFLSNSWWVVHS--------FMFMLCFTFMFCIYSYSDFNLMGYFFGLDyFSFSLILLSFWICSLMILAS 76
Cdd:PRK08667 12 LLLAAAVIPLVFRHKRKRVWQSvlwlviaiALLLFAGSLQLFTGNPLDIPLWGIAPGLD-ITFHIDRLAAFFIILIGLVS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 77 GSIYFYS-------------YHSGFFVFIVIFLMIMLycsFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYL 143
Cdd:PRK08667 91 LCVAIYSlgynehmssneraNLLSALTALFILSMLGV---VASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFY 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 144 IFYTLFASLPLLLILFKLYFIVNTLYFPLISDLGSFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVL 223
Cdd:PRK08667 168 FVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVM 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 224 LKLGGYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMV---IG--------GLLTM 292
Cdd:PRK08667 248 LKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgIGlyvifgvyGLDTL 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 293 NWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLINS 372
Cdd:PRK08667 328 ALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
|
.
gi 470235851 373 L 373
Cdd:PRK08667 408 F 408
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
4.60e-11 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 59.46 E-value: 4.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 1 MLKYLFALFFMMPLCFLSNSWW-----VVHSFMFMLCFTFMFCIYSYSDFNLMGYFFGLDYFSFSLILLSFWICSLMILA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*....
gi 470235851 76 SGSIYFYS--YHSGFFVFIVIFLMIMLYC 102
Cdd:pfam01059 81 SQKHLKSEpnNRQRTFIFLLILLQLFLIL 109
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-353 |
1.61e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 62.66 E-value: 1.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 113 YIFFESSLVPTlFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDLGSFYFlfyVFMIMAFL 192
Cdd:PRK07234 120 YVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAF---ALIALGLL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 193 VKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLKFNYFLISLSLFGgvliSFMCIRQVDLKS 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKR 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 273 LIAYSSVAHMSMVIGGLLtmnwWGYLGSLiimvGHGLCSSGLFCLSNIIYERLgsrslliNKGMINLMPGMSFWWFLLSS 352
Cdd:PRK07234 272 MLAFSTISQLGFILAAPL----VGGLYAL----AHGLVKSTLFLCAGALPSRN-------FTELISQMLGIGKWIPLTMA 336
|
.
gi 470235851 353 S 353
Cdd:PRK07234 337 S 337
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
88-443 |
2.82e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.38 E-value: 2.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 88 FFVFIVIFLMIMLyCSFSSLSLFSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFI--V 165
Cdd:PRK12646 112 FYFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMtgT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 166 NTLYFPL-----ISDLGSFYFLFYVFMIMAFlVKMPMFIVHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGMFRVMKIIS 239
Cdd:PRK12646 191 NNITEILgqadhIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 240 YLGLkFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAH----MSMV-IGGLLTMNWWGYLGSLIIMV--------- 305
Cdd:PRK12646 269 LSNM-YIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYVFVlfaalfhlm 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 306 GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFwWFLLSSSNMAAPPSLN-------LFGELSLINSLMSWSI 378
Cdd:PRK12646 348 NHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgflskemFLDALTQTGQLSQFSL 426
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 470235851 379 SMFMVLIFL----CFFSAVYTLYMYSYSqhgmyYSGSYSFSLCYVREYHLLFLHWLPLNIICLMISYFF 443
Cdd:PRK12646 427 ISMIIIVFIgviaSIFTFTYALYMVKEV-----FWGKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIF 490
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-365 |
7.81e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 57.67 E-value: 7.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 113 YIFFESSLVPTlFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLIS------DLGSFYFLFYVF 186
Cdd:PRK12665 137 YVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAvrldelPSGTRTALFAVL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 187 MImAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIIsYLGLKFNYFLISLSLFGGVLISFMCIR 266
Cdd:PRK12665 216 LV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPGGGLDTLLMVVALLTMVVGILGAIA 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 267 QVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFW 346
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVL 373
|
250
....*....|....*....
gi 470235851 347 WFLlsssnmaapPSLNLFG 365
Cdd:PRK12665 374 FFV---------PALNLGG 383
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-375 |
4.09e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.13 E-value: 4.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 186 FMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKII-----SYLGLKFNYFLISLSLFGGVLI 260
Cdd:PRK12662 214 FIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 261 SFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLM 340
Cdd:PRK12662 294 SVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSM 373
|
170 180 190
....*....|....*....|....*....|....*
gi 470235851 341 PGMSFWWFLLSSSNMAAPPSLNLFGELSLINSLMS 375
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-370 |
1.11e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.95 E-value: 1.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 113 YIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDLGSFYFLF-----YVFM 187
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVvakiaLALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 188 IMAFLVKMPMFIVHLWLPSAHVEAPISGSMILagVLLKLGG-YGMFRVmkIISYLGLKFNYFLIS--------LSLFGGV 258
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINLATVGwviiilgcLTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 259 LisfMCIRQVDLKSLIAYSSVAH---------MSMVIGGLLTMNWWGYL---GSLIIMVGHGLCSSGLFCLSNIIYERLG 326
Cdd:PRK08376 303 A---MAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETG 379
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 470235851 327 SRSLLINKGMINLMPGMSFwWFLLSSSNMAAPPSLNLFGELSLI 370
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTI-AFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
185-401 |
1.17e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 54.28 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 185 VFMIMAFLVKMPMFIVHLWLPSAHVEA-PIS-----GSMILAGVLLKLGGYGMFRVMKIisylglkFNYFLISLSLFGGV 258
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMITAL 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 259 LISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK12650 285 MGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWR 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 470235851 339 LMPgMSFWWFLLSSSNMAA-PPSLNLFGELSLINSLMSWSISMF-MVLIFLCF-FSAVYTlYMYSY 401
Cdd:PRK12650 365 RMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFLEAPGGNAgVVLLLVGAaLGAVFT-FAYSA 428
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
182-364 |
1.21e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.12 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 182 LFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVmkIISYLG---LKFNYFLISLSLFG-- 256
Cdd:PRK06521 211 LVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGapgWWWGVLVLALGAISav 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 257 -GVLISFMcirQVDLKSLIAYSSVAHMSMVIGGL-LTMNWWGY----------LGSLIIMVGHGLCSSGLFCLSNIIYER 324
Cdd:PRK06521 289 lGVLYALA---EHDLKRLLAYSTIENIGIIFVGLgLAMVFIAYgmpllaalalTAALYHLLNHALFKSLLFLGAGAVLHA 365
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 470235851 325 LGSRSLLINKGMINLMPGMSfWWFLLSSSNMAAPPSLNLF 364
Cdd:PRK06521 366 TGTRDMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLNGF 404
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-411 |
1.21e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 50.54 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 187 MIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLG--LKFNYFLISLSLFGGVLISFMC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 265 IRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMS 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 470235851 345 FWWFLLSSSNMAAPPSLNLFGELSLINSLMSWSISMFMVLIFlcFFSAVYTLYmYSYSQHGMYYSGS 411
Cdd:PRK08377 372 LALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL--GASVVEAVY-YFRLIHTMWFKGE 435
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-396 |
6.35e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 48.27 E-value: 6.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 59 FSLILLSFWICSLMILASGSIYFYSYHSGFFVFIVIFLMIMLYCSFSSLSLFSFYIFFESSLVPTLFLIlGWGYQPERLQ 138
Cdd:PRK06589 88 FLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 139 AGI-YLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDLGSFYFLFYVFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSM 217
Cdd:PRK06589 167 GGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSAL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 218 ILAGVLLKLGGYGMFRVMKIISYLG-----LKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTM 292
Cdd:PRK06589 247 LHAVIVVKTGLFCIYKILLYIFGLSylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 293 NWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWFLLSSSNMAAPPSLNLFGELSLI-- 370
Cdd:PRK06589 327 TPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILla 406
|
330 340
....*....|....*....|....*....
gi 470235851 371 ---NSLMSWSISMFMVLIFLCFFSAVYTL 396
Cdd:PRK06589 407 aseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
113-359 |
6.94e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.94 E-value: 6.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 113 YIFFESSLVPTlFLILGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLIS----DLGSFYFLFYV--F 186
Cdd:PRK12663 134 YVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAmrlnDMGDTATLTTIalL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 187 MIMAFLVKMPMFIVHlWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLKFNYFLISLSLFGGVLI-SFMCI 265
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIgALGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 266 RQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSF 345
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250
....*....|....
gi 470235851 346 WWFLLSSSNMAAPP 359
Cdd:PRK12663 372 LFLILIFAIGGLPP 385
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-315 |
8.54e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 8.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 185 VFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLlKLGGYGMF-RVMK-IISYLGLKFNYFLISLSLFGGVLISF 262
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVvAFGGLSEDWQQVLAIIAIASMLVGNL 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 470235851 263 MCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLF 315
Cdd:PRK05777 287 AALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-364 |
3.45e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 3.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 200 VHLWLPSAHVEAPISGSMILAGVLLKLGGYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLKSLIAYSSV 279
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 280 AHMSMVIGGL------LTMNW-----WGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFwWF 348
Cdd:PRK08042 279 ENIGIILLGLgagvtgIALEQpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI-AM 357
|
170
....*....|....*.
gi 470235851 349 LLSSSNMAAPPSLNLF 364
Cdd:PRK08042 358 LVGLMAMAALPPLNGF 373
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
185-315 |
1.48e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 40.87 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 185 VFMIMAFLVKMPMFIVHLWLPSAHVEAPISGSMILAGVLlKLGGYGMF-RVMkIISYLGLKFN-----YFLISLSLFGGv 258
Cdd:COG1007 207 VLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAALlRLL-VEAFPGLAADwqlllAVLAVLSMTVG- 283
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 470235851 259 liSFMCIRQVDLKSLIAYSSVAHMSMVIGGLLTMNWWGYLGSLIIMVGHGLCSSGLF 315
Cdd:COG1007 284 --NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
114-399 |
2.56e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.96 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 114 IFFESSLVPTLFLIlGWGYQPERLQAGIYLIFYTLFASLPLLLILFKLYFIVNTLYFPLISDL-GSFYFLFYVFMIMAFL 192
Cdd:PRK06525 140 LFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLhGSLKYLVFLGILFAAW 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 193 VKMPMFIVHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGMFRVMKIISYLGLKFNYFLISLSLFGGVLISFMCIRQVDLK 271
Cdd:PRK06525 219 GKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470235851 272 SLIAYSSVAHMSMVIGGLLTM---NWWGYLGSLIIMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPGMSFWWF 348
Cdd:PRK06525 298 RLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFC 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 470235851 349 LLSSSNMAAPPSLNLFGELSLINSLMS----WSISMFMVLIFLCFFSAVYTLYMY 399
Cdd:PRK06525 378 VAALAITGVPPFNGFFSKFPIFAAGFElsveYWILLPAMVLLLIESVASFAWFLR 432
|
|
| |
