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Conserved domains on  [gi|511347970|ref|YP_008080894|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Tarragoilus diuturnus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 6-115 2.08e-37

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.19  E-value: 2.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   6 TITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMHWSN 85
Cdd:MTH00161   4 IILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 511347970  86 IFTWSMVSIFFLMILLIGLFHEWRQGALEW 115
Cdd:MTH00161  84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 6-115 2.08e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.19  E-value: 2.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   6 TITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMHWSN 85
Cdd:MTH00161   4 IILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 511347970  86 IFTWSMVSIFFLMILLIGLFHEWRQGALEW 115
Cdd:MTH00161  84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.83e-21

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 80.93  E-value: 2.83e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   19 MVIASNLSKKSIaDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALllpiiiimhwsnIFTWSMV------ 92
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVF------------LFPWAVSfrelgw 67

                          90       100
                  ....*....|....*....|....*..
gi 511347970   93 -----SIFFLMILLIGLFHEWRQGALE 114
Cdd:pfam00507  68 fgfveMLIFIAILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-115 1.83e-19

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 76.70  E-value: 1.83e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   7 ITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALllpiiiimhwsnI 86
Cdd:COG0838   10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVF------------L 77

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 511347970  87 FTWSMVS-----------IFFLMILLIGLFHEWRQGALEW 115
Cdd:COG0838   78 FPWAVVFrelgwfgliemLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 6-115 2.08e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 122.19  E-value: 2.08e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   6 TITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMHWSN 85
Cdd:MTH00161   4 IILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 511347970  86 IFTWSMVSIFFLMILLIGLFHEWRQGALEW 115
Cdd:MTH00161  84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.10e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 118.04  E-value: 1.10e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 511347970  81 MHWSNIFTWSMVSIFFLMILLIGLFHEWRQGALEWA 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 3.40e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 109.56  E-value: 3.40e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 511347970  81 MHWSNIFTWSMVSIFFLMILLIGLFHEWRQGALEWA 116
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 4.04e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 109.31  E-value: 4.04e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 511347970  81 MHWSNIFTWSMVSIFFLMILLIGLFHEWRQGALEWA 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 4.78e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 98.90  E-value: 4.78e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTITFIIMMLSILVMVIASNLSKKSIaDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIII 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 511347970  81 MHWSNIFTWSMVSIFFLMILLIGLFHEWRQGALEWAN 117
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 7.30e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 95.76  E-value: 7.30e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTITFIIMMLSILVMVIASNLSKKSiADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEiallLPIIII 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMT-PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLE----IALLLP 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 511347970  81 MHWSN-------IFTWSMVsifFLMILLIGLFHEWRQGALEWA 116
Cdd:MTH00136  76 LPWGDqlpspllTFFWATA---VLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 2.67e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 91.93  E-value: 2.67e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTItFIIMMLSILVMVIASNLSKKSIAdREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIII 80
Cdd:MTH00106   1 MNLMLTL-LTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 511347970  81 MHWSNIFTWSMVSIFFLMILLIGLFHEWRQGALEWA 116
Cdd:MTH00106  79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 6.24e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 90.82  E-value: 6.24e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   3 LTYTITFIIMMLSILVMVIASNLSKKSiADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPI---II 79
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNN-PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQ 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 511347970  80 IMHWSNIFTWSMVsifFLMILLIGLFHEWRQGALEWA 116
Cdd:MTH00069  80 LNTPTNTLFWSTL---ILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 3-116 7.83e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 88.01  E-value: 7.83e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   3 LTYTITFIIMMLSILVMVIASNLSKKSiADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMH 82
Cdd:MTH00113   2 NLISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 511347970  83 WSNIFTWSMVSIFFLMILLIGLFHEWRQGALEWA 116
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-115 2.39e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 81.48  E-value: 2.39e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   3 LTYTITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMH 82
Cdd:MTH00203   2 NLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQ 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 511347970  83 WSniFTWSMVSIFFLMILLIGLFHEWRQGALEW 115
Cdd:MTH00203  82 LS--SLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.83e-21

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 80.93  E-value: 2.83e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   19 MVIASNLSKKSIaDREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALllpiiiimhwsnIFTWSMV------ 92
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVF------------LFPWAVSfrelgw 67

                          90       100
                  ....*....|....*....|....*..
gi 511347970   93 -----SIFFLMILLIGLFHEWRQGALE 114
Cdd:pfam00507  68 fgfveMLIFIAILLVGLVYAWKKGALE 94
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-116 9.50e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 80.29  E-value: 9.50e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   7 ITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMHWSNI 86
Cdd:PRK06602  13 IFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGW 92

                         90       100       110
                 ....*....|....*....|....*....|.
gi 511347970  87 FT-WSMvsIFFLMILLIGLFHEWRQGALEWA 116
Cdd:PRK06602  93 LGfVEA--MIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-115 1.83e-19

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 76.70  E-value: 1.83e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   7 ITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALllpiiiimhwsnI 86
Cdd:COG0838   10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVF------------L 77

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 511347970  87 FTWSMVS-----------IFFLMILLIGLFHEWRQGALEW 115
Cdd:COG0838   78 FPWAVVFrelgwfgliemLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-115 1.38e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 74.75  E-value: 1.38e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTITFIIMMLSILVMVIASNLS---KKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPI 77
Cdd:MTH00055   1 MSMEFLGIFILLLFSIGLSTVISGASyivGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 511347970  78 IIIMHWSNIF-TWSMvsIFFLMILLIGLFHEWRQGALEW 115
Cdd:MTH00055  81 CVVYNQIGLFgFWVM--YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 9-115 1.63e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 69.32  E-value: 1.63e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   9 FIIMMLSILVMVIASNLSKKSiADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMHWSNIFT 88
Cdd:MTH00018   8 IFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFG 86

                         90       100
                 ....*....|....*....|....*..
gi 511347970  89 WSMVsIFFLMILLIGLFHEWRQGALEW 115
Cdd:MTH00018  87 FWTM-VGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 10-115 1.06e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 64.95  E-value: 1.06e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970  10 IIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIMHWSNIFTW 89
Cdd:MTH00030  18 IILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSF 97

                         90       100
                 ....*....|....*....|....*.
gi 511347970  90 SMVSIfFLMILLIGLFHEWRQGALEW 115
Cdd:MTH00030  98 WIVYT-FLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 5-115 5.61e-13

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 60.39  E-value: 5.61e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   5 YTITFIIMMLSILVMVIASNLSKKSIADR---EKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIM 81
Cdd:CHL00022   7 YDIFWAFLIISSLIPILAFLISGLLAPISkgpEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSF 86

                         90       100       110
                 ....*....|....*....|....*....|....
gi 511347970  82 HWSNIFTWSMVSIFFLmILLIGLFHEWRQGALEW 115
Cdd:CHL00022  87 DVLGVSAFIEALIFVL-ILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
4-115 3.44e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.21  E-value: 3.44e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   4 TYTITFIIMMLSILVMVIASNLSK---KSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIII 80
Cdd:PRK07756   8 SYMIVLIFLLLGILLPVVALTLGRmlrPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVA 87

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 511347970  81 MHWSNIFTWSMVSIFFLMiLLIGLFHEWRQGALEW 115
Cdd:PRK07756  88 YDKLGLFALIEMLIFVVM-LLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 9-115 9.71e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 44.28  E-value: 9.71e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   9 FIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLP--FSLRFFLIAVIFLIFDVEIALLLPIIiiMHWSNI 86
Cdd:PRK07928  11 GALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWA--VSFDAL 88

                         90       100       110
                 ....*....|....*....|....*....|
gi 511347970  87 FTWSMVS-IFFLMILLIGLFHEWRQGALEW 115
Cdd:PRK07928  89 GVFGLVEmALFMLTVFVAYAYVWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
13-115 1.24e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.19  E-value: 1.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970  13 MLSILVMVIASNLSKKSiADREKSSPFECGFDP-KSSARLpfSLRFFLIAVIFLIFDVEIALLLPiiiimhWSNIF---- 87
Cdd:PRK08489  26 LTTRLARFISRKLAQKN-TEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFP------WAVDFkllg 96

                         90       100
                 ....*....|....*....|....*....
gi 511347970  88 TWSMVSIF-FLMILLIGLFHEWRQGALEW 115
Cdd:PRK08489  97 LFGLIEMLlFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-117 5.67e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.80  E-value: 5.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   1 MCLTYTITFIIMMLSILVMVIASNL--SKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPII 78
Cdd:MTH00060   1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 511347970  79 IIMHWSNIFTWSMvsiFFLMILLIGLFHEWRQGALEWAN 117
Cdd:MTH00060  81 FQGLLFYNFWYYY---FFLLLLFLGFVVELFSGYVRWVY 116
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 2-115 6.67e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 33.71  E-value: 6.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347970   2 CLTYTITFIIMMLSILVMVIASNLSKKSIADREKSSPFECGFDPKSSARLPFSLRFFLIAVIFLIFDVEIALLLPIIIIM 81
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSD 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 511347970  82 hwsnifTWSMVSIFFLMI-LLIGLFHEWRQGALEW 115
Cdd:MTH00092  81 ------FSSLISFFMLMIfIFFGFYMEWWYGKLIW 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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