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Conserved domains on  [gi|511347976|ref|YP_008080900|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Tarragoilus diuturnus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-311 3.11e-157

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 441.52  E-value: 3.11e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   7 LISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSL 86
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  87 FLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDS 166
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 167 YCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 246
Cdd:MTH00193 162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 511347976 247 TIFLGCDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFL 311
Cdd:MTH00193 242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-311 3.11e-157

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 441.52  E-value: 3.11e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   7 LISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSL 86
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  87 FLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDS 166
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 167 YCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 246
Cdd:MTH00193 162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 511347976 247 TIFLGCDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFL 311
Cdd:MTH00193 242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-303 1.52e-102

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 302.47  E-value: 1.52e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   14 LLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSLFLALLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   94 MVYPYMTFM--LSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDSYCLLQ 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  172 FFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCTIFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 511347976  252 ------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIF 303
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 4.89e-96

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 287.03  E-value: 4.89e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   1 MNLF--EILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLY 78
Cdd:COG1005    1 MSLLlaPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  79 YFSPVFSLFLALLVWMVYPY--MTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALI 156
Cdd:COG1005   81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 157 LLSFVFLIDSYCLLQFFYFQ-GYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEY 235
Cdd:COG1005  161 LLGVVLLAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 236 ASILFMSMLFCTIFLG------------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIF 303
Cdd:COG1005  241 ANMFLVSALATTLFLGgwlgpfpilplgGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-311 3.11e-157

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 441.52  E-value: 3.11e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   7 LISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSL 86
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  87 FLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDS 166
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 167 YCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 246
Cdd:MTH00193 162 FNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFV 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 511347976 247 TIFLGCDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFL 311
Cdd:MTH00193 242 LMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 13-309 4.63e-137

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 390.16  E-value: 4.63e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  13 SLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSLFLALLV 92
Cdd:MTH00225   7 FLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  93 WMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDSYCLLQF 172
Cdd:MTH00225  87 WSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDF 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 173 FYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCTIFLGC 252
Cdd:MTH00225 167 SYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGG 246

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 511347976 253 DVGTFNFF--IKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSI 309
Cdd:MTH00225 247 FFVTIDLFliLKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-308 1.45e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 363.81  E-value: 1.45e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   7 LISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSL 86
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  87 FLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDS 166
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 167 YCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFC 246
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 511347976 247 TIFLG-----CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLS 308
Cdd:MTH00143 241 VLFFGgssvlFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 6-314 6.43e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 352.66  E-value: 6.43e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   6 ILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFS 85
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  86 LFLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLID 165
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 166 SYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 245
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 511347976 246 CTIFLG-------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFLFSV 314
Cdd:MTH00111 244 TILFLNpstlnlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-314 4.49e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 347.76  E-value: 4.49e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   6 ILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFS 85
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  86 LFLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLID 165
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 166 SYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 245
Cdd:MTH00071 164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 511347976 246 CTIFLGC-------DVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFLFSV 314
Cdd:MTH00071 244 TILFLGStynhlqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-314 1.23e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 343.82  E-value: 1.23e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   6 ILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFS 85
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  86 LFLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLID 165
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 166 SYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 245
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 511347976 246 CTIFLGCDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFLFSV 314
Cdd:MTH00218 241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 10-314 3.15e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 343.14  E-value: 3.15e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  10 LVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSLFLA 89
Cdd:MTH00104   3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  90 LLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDSYCL 169
Cdd:MTH00104  83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 170 LQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCTIF 249
Cdd:MTH00104 163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 511347976 250 LGC-------DVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFLFSV 314
Cdd:MTH00104 243 LGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-309 2.29e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 338.50  E-value: 2.29e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   3 LFEILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSP 82
Cdd:MTH00134   2 LSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  83 VFSLFLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVF 162
Cdd:MTH00134  82 MLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVII 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 163 LIDSYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMS 242
Cdd:MTH00134 162 FTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMN 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 511347976 243 MLFCTIFLGC-------DVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSI 309
Cdd:MTH00134 242 TLSAILFLGAshiptlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPI 315
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-311 8.27e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 323.62  E-value: 8.27e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   6 ILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFS 85
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  86 LFLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLID 165
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 166 SYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLF 245
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 511347976 246 CTIFLGCDvGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFL 311
Cdd:MTH00195 241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 5-314 6.99e-110

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 321.93  E-value: 6.99e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   5 EILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVF 84
Cdd:MTH00040   2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  85 SLFLALLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLI 164
Cdd:MTH00040  82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 165 DSYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSML 244
Cdd:MTH00040 162 GSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 511347976 245 FCTIFLGCDVGTFNFF--------IKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFLFSV 314
Cdd:MTH00040 242 SVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNIL 319
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 14-311 3.27e-105

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 309.79  E-value: 3.27e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  14 LLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSLFLALLVW 93
Cdd:MTH00010  10 LLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLW 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  94 MVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDSYCLLQFF 173
Cdd:MTH00010  90 SLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKII 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 174 YFQgYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCTIFLGCD 253
Cdd:MTH00010 170 MSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFI 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 511347976 254 VGTF----NFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSIFL 311
Cdd:MTH00010 249 PSIFisdlMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NADHdh pfam00146
NADH dehydrogenase;
14-303 1.52e-102

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 302.47  E-value: 1.52e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   14 LLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSLFLALLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   94 MVYPYMTFM--LSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDSYCLLQ 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  172 FFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCTIFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 511347976  252 ------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIF 303
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 4.89e-96

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 287.03  E-value: 4.89e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   1 MNLF--EILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLY 78
Cdd:COG1005    1 MSLLlaPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  79 YFSPVFSLFLALLVWMVYPY--MTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALI 156
Cdd:COG1005   81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 157 LLSFVFLIDSYCLLQFFYFQ-GYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEY 235
Cdd:COG1005  161 LLGVVLLAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 236 ASILFMSMLFCTIFLG------------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIF 303
Cdd:COG1005  241 ANMFLVSALATTLFLGgwlgpfpilplgGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-309 7.44e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 278.92  E-value: 7.44e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   6 ILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFS 85
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  86 LFLALLVWMVYPYMT-FMLS-FNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFL 163
Cdd:MTH00054  81 LTLAFIAWGVIPYGEgVVLSdLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 164 IDSYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 243
Cdd:MTH00054 161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 511347976 244 LFCTIFLG----------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSI 309
Cdd:MTH00054 241 FGVILFLGgwlvisgptsYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-307 2.34e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 277.39  E-value: 2.34e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   2 NLFEILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFS 81
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  82 PVFSLFLALLVWMVYPYMTFML--SFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLS 159
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 160 FVFLIDSYCLLQFFYFQG-YVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASI 238
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 511347976 239 LFMSMLFCTIFLG--------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGL 307
Cdd:MTH00216 241 ILMSCLTTILFLGgwlspikyFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-298 1.62e-88

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 267.44  E-value: 1.62e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   6 ILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFS 85
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  86 LFLALLVWMVYPYM-TFMLSF-NFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFL 163
Cdd:PRK06076  89 FIPAFLAWAVIPFGpELVIADlNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 164 IDSYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSM 243
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 511347976 244 LFCTIFLG----------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:PRK06076 249 LITTLFLGgwlppfplggGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-309 1.01e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 227.98  E-value: 1.01e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   1 MNLFEILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYF 80
Cdd:MTH00029   1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  81 SPVFSLFLALLVWMVYPY--MTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILL 158
Cdd:MTH00029  81 APIISFTLAILAWAIVTMdqGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 159 SFVFLIDSYCLLQFFYFQGYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASI 238
Cdd:MTH00029 161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 239 LFMSMLFCTIFLG-----------------------CDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLP 295
Cdd:MTH00029 241 ILMSCMMTIFFLGgwlspldgiptppeafsifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320

                        330
                 ....*....|....
gi 511347976 296 LSLNYLIFFIGLSI 309
Cdd:MTH00029 321 LSLGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 14-309 4.03e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 206.29  E-value: 4.03e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  14 LLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSLFLALLVW 93
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  94 MVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDSYCllqfF 173
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFS----F 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 174 YFQGYVWFIFFSFPlalaWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCTIFLGcd 253
Cdd:MTH00090 159 VSSFSLSLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 511347976 254 vgtFNFFIKLTFLSFMfIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFIGLSI 309
Cdd:MTH00090 233 ---FSFLMLFLIFSLL-IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 10-305 6.64e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 162.40  E-value: 6.64e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  10 LVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFSPVFSLFLA 89
Cdd:MTH00058   4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  90 LLVWMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVFLIDSYCL 169
Cdd:MTH00058  84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 170 LQFFYFQGYVWFIFFsfPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASILFMSMLFCTIF 249
Cdd:MTH00058 164 VDFYYSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLF 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 511347976 250 LGcdvGTFNFFIkLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFI 305
Cdd:MTH00058 242 FG---GGFVSIM-LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-302 1.82e-39

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 142.01  E-value: 1.82e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   2 NLFEILISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPNKVGFVGVPQPFSDAIKLFMKEQTHPLLSNYFLYYFS 81
Cdd:CHL00032  22 EVYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIG 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  82 P---VFSLFLALLVwMVYPYMTFMLSFNFGVLFFLCCTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILL 158
Cdd:CHL00032 102 PsiaVISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 159 SFVFLIDSYCLLQF------FYFQGY-VWFIFFSFplaLAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIF 231
Cdd:CHL00032 181 SISLLSNSLSTVDIveaqskYGFWGWnLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 232 LAEYASiLFMSMLFCTIF--------------------------LGCDVGTFNFFIKLTFLSFMFIWVRGTLPRFRYDKL 285
Cdd:CHL00032 258 VASYLN-LLVSSLFVTVLylggwnlsipyifipelfeinktggvFGTTIGIFITLAKTYLFLFISITTRWTLPRLRMDQL 336

                        330
                 ....*....|....*..
gi 511347976 286 MYLAWKSFLPLSLNYLI 302
Cdd:CHL00032 337 LNLGWKFLLPISLGNLL 353
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-305 3.78e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 104.88  E-value: 3.78e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976   7 LISLVDSLLLIICVLVGVAFLTLLERKVLGYIQIRKGPnkvgfvGVPQPFSDAIKLFMKEQTHPLLSNyFLYYFSPVFSL 86
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976  87 ----FLALLVWMVYPYMTFMLSFNFGVLFFLccTSMGVYTVMVAGWASNSNYALLGGLRAIAQTISYEVSLALILLSFVF 162
Cdd:COG0650   74 aamlLAALLVPVLTTGPPLSFSGDLIVLVYL--LALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALAL 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 511347976 163 LIDSYCLLQFFYFQ---GYVWFIFFSFPLALAWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYASIL 239
Cdd:COG0650  152 LAGSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLF 231

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 511347976 240 FMSMLFCTIFLGCDVGTFN------FFIKLTFLSFMFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLIFFI 305
Cdd:COG0650  232 VLLSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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