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AC1 [Sweet potato leaf curl Shanghai virus]
replication-associated protein( domain architecture ID 10466662)
replication-associated protein is essential for the replication of viral ssDNA by initiating the rolling-circle replication
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Gemini_AL1 | pfam00799 | Geminivirus Rep catalytic domain; The AL1 proteins encodes the replication initiator protein ... |
7-119 | 1.18e-49 | |||
Geminivirus Rep catalytic domain; The AL1 proteins encodes the replication initiator protein (Rep) of geminiviruses, which is a replicon-specific initiator enzyme and is an essential component of the replisome. For geminivirus Rep protein, this N-terminal region is crucial for origin recognition and DNA cleavage and nucleotidyl transfer. : Pssm-ID: 366313 Cd Length: 113 Bit Score: 162.33 E-value: 1.18e-49
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Gemini_AL1_M super family | cl07042 | Geminivirus rep protein central domain; This is the cetral domain of the geminivirus rep ... |
126-230 | 2.99e-26 | |||
Geminivirus rep protein central domain; This is the cetral domain of the geminivirus rep proteins. The actual alignment was detected with superfamily member pfam08283: Pssm-ID: 285483 Cd Length: 107 Bit Score: 100.76 E-value: 2.99e-26
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Name | Accession | Description | Interval | E-value | |||
Gemini_AL1 | pfam00799 | Geminivirus Rep catalytic domain; The AL1 proteins encodes the replication initiator protein ... |
7-119 | 1.18e-49 | |||
Geminivirus Rep catalytic domain; The AL1 proteins encodes the replication initiator protein (Rep) of geminiviruses, which is a replicon-specific initiator enzyme and is an essential component of the replisome. For geminivirus Rep protein, this N-terminal region is crucial for origin recognition and DNA cleavage and nucleotidyl transfer. Pssm-ID: 366313 Cd Length: 113 Bit Score: 162.33 E-value: 1.18e-49
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Gemini_AL1_M | pfam08283 | Geminivirus rep protein central domain; This is the cetral domain of the geminivirus rep ... |
126-230 | 2.99e-26 | |||
Geminivirus rep protein central domain; This is the cetral domain of the geminivirus rep proteins. Pssm-ID: 285483 Cd Length: 107 Bit Score: 100.76 E-value: 2.99e-26
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Name | Accession | Description | Interval | E-value | |||
Gemini_AL1 | pfam00799 | Geminivirus Rep catalytic domain; The AL1 proteins encodes the replication initiator protein ... |
7-119 | 1.18e-49 | |||
Geminivirus Rep catalytic domain; The AL1 proteins encodes the replication initiator protein (Rep) of geminiviruses, which is a replicon-specific initiator enzyme and is an essential component of the replisome. For geminivirus Rep protein, this N-terminal region is crucial for origin recognition and DNA cleavage and nucleotidyl transfer. Pssm-ID: 366313 Cd Length: 113 Bit Score: 162.33 E-value: 1.18e-49
|
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Gemini_AL1_M | pfam08283 | Geminivirus rep protein central domain; This is the cetral domain of the geminivirus rep ... |
126-230 | 2.99e-26 | |||
Geminivirus rep protein central domain; This is the cetral domain of the geminivirus rep proteins. Pssm-ID: 285483 Cd Length: 107 Bit Score: 100.76 E-value: 2.99e-26
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Blast search parameters | ||||
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