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Conserved domains on  [gi|602993982|ref|YP_009021784|]
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hypothetical protein PM1_007 [Pectobacterium phage PM1]

Protein Classification

DUF4326 domain-containing protein( domain architecture ID 10624840)

DUF4326 domain-containing protein similar to Acanthamoeba polyphaga mimivirus protein R718 and Enterobacteria phage T4 NrdA.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4326 pfam14216
Domain of unknown function (DUF4326); This family of proteins is functionally uncharacterized. ...
 9-93 3.76e-22

Domain of unknown function (DUF4326); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 100 and 162 amino acids in length. There are two completely conserved residues (P and C) that may be functionally important.


:

Pssm-ID: 433779  Cd Length: 80  Bit Score: 81.95  E-value: 3.76e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602993982    9 KTKG--VHSNAVYIGRSmrgiegnAKFHNPYKMFKEEQRDYVCEQYRRHLWNQIKTGEVTIQDLLELDGKDLVCWCAPAR 86
Cdd:pfam14216   1 RTKGwrMPPNDVYIGRG-------SKWGNPFVIGDDGDREEVVEKYRQWLEARPEQDKTLLAALEELRGKNLACWCPPKP 73


                  ....*..
gi 602993982   87 CHGDTIM 93
Cdd:pfam14216  74 CHGDVLL 80
 
Name Accession Description Interval E-value
DUF4326 pfam14216
Domain of unknown function (DUF4326); This family of proteins is functionally uncharacterized. ...
 9-93 3.76e-22

Domain of unknown function (DUF4326); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 100 and 162 amino acids in length. There are two completely conserved residues (P and C) that may be functionally important.


Pssm-ID: 433779  Cd Length: 80  Bit Score: 81.95  E-value: 3.76e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602993982    9 KTKG--VHSNAVYIGRSmrgiegnAKFHNPYKMFKEEQRDYVCEQYRRHLWNQIKTGEVTIQDLLELDGKDLVCWCAPAR 86
Cdd:pfam14216   1 RTKGwrMPPNDVYIGRG-------SKWGNPFVIGDDGDREEVVEKYRQWLEARPEQDKTLLAALEELRGKNLACWCPPKP 73


                  ....*..
gi 602993982   87 CHGDTIM 93
Cdd:pfam14216  74 CHGDVLL 80
 
Name Accession Description Interval E-value
DUF4326 pfam14216
Domain of unknown function (DUF4326); This family of proteins is functionally uncharacterized. ...
 9-93 3.76e-22

Domain of unknown function (DUF4326); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 100 and 162 amino acids in length. There are two completely conserved residues (P and C) that may be functionally important.


Pssm-ID: 433779  Cd Length: 80  Bit Score: 81.95  E-value: 3.76e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602993982    9 KTKG--VHSNAVYIGRSmrgiegnAKFHNPYKMFKEEQRDYVCEQYRRHLWNQIKTGEVTIQDLLELDGKDLVCWCAPAR 86
Cdd:pfam14216   1 RTKGwrMPPNDVYIGRG-------SKWGNPFVIGDDGDREEVVEKYRQWLEARPEQDKTLLAALEELRGKNLACWCPPKP 73


                  ....*..
gi 602993982   87 CHGDTIM 93
Cdd:pfam14216  74 CHGDVLL 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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