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Conserved domains on  [gi|688074701|ref|YP_009059110|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Filchnerella beicki]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 7.26e-36

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 118.34  E-value: 7.26e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   3 TLLMSFTISFLMPMLVMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 688074701  83 FSNLMIWTSTTLFFILILLGGLYHEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 7.26e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 118.34  E-value: 7.26e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   3 TLLMSFTISFLMPMLVMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 688074701  83 FSNLMIWTSTTLFFILILLGGLYHEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.14e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 73.61  E-value: 2.14e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   19 MLLATILSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMKfSNLMIWTSTTLFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 688074701   99 ILLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 6.23e-16

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 67.84  E-value: 6.23e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   2 MTLLMSFTISFLMPMLVMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIM 81
Cdd:COG0838    6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                         90       100       110
                 ....*....|....*....|....*....|....
gi 688074701  82 KFSNLMIWTStTLFFILILLGGLYHEWNQGALQW 115
Cdd:COG0838   85 RELGWFGLIE-MLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 7.26e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 118.34  E-value: 7.26e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   3 TLLMSFTISFLMPMLVMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 688074701  83 FSNLMIWTSTTLFFILILLGGLYHEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 5.55e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 113.80  E-value: 5.55e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   1 MMTLLMSFTISFLMPMLVMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 688074701  81 MKFSNLMIWTSTTLFFILILLGGLYHEWNQGALQWAE 117
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 4.33e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 103.92  E-value: 4.33e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   1 MMTLLMSFTISFLMPMLVMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 688074701  81 MKFSNLMIWTSTTLFFILILLGGLYHEWNQGALQWAE 117
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 1.42e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 100.32  E-value: 1.42e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   1 MMTLLMSFTISFLMPMLVMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 688074701  81 MKFSNLMIWTSTTLFFILILLGGLYHEWNQGALQWA 116
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 3.48e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 88.89  E-value: 3.48e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   1 MMTLLMSFTISFLMPMLVMLLATILSKKMInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIII 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 688074701  81 MKFSNLMIWTSTTLFFILILLGGLYHEWNQGALQWAE 117
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-117 1.33e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 87.30  E-value: 1.33e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   2 MTLLMSFTISFLMPMLVMLLATILSKKMINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIM 81
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 688074701  82 KFSNLMIWTSTTLFFILILLGGLYHEWNQGALQWAE 117
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-116 2.28e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 84.16  E-value: 2.28e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   2 MTLLMSFTISFLMPMLVMLLATILSKkMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIM 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 688074701  82 KFSNLMIWTSTTLFFILILLGGLYHEWNQGALQWA 116
Cdd:MTH00113  80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 2-117 1.11e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 79.96  E-value: 1.11e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   2 MTLLMS-FTISFLMPMLVMLLATILSKkMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDieiaLILPIIII 80
Cdd:MTH00136   1 MNLITTiLTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFD----LEIALLLP 75

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 688074701  81 MKFSNLMIWTSTTLFF---ILILLG-GLYHEWNQGALQWAE 117
Cdd:MTH00136  76 LPWGDQLPSPLLTFFWataVLILLTlGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 14-117 3.89e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 78.50  E-value: 3.89e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701  14 MPMLVMLLATILSKKMIN----------DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPI--IIIM 81
Cdd:MTH00069   1 LIMLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 688074701  82 KFSNLMIWTSTTlffILILLG-GLYHEWNQGALQWAE 117
Cdd:MTH00069  81 NTPTNTLFWSTL---ILILLTlGLIYEWIQGGLEWAE 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.14e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 73.61  E-value: 2.14e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   19 MLLATILSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMKfSNLMIWTSTTLFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 688074701   99 ILLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 2-115 1.78e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 71.85  E-value: 1.78e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   2 MTLLMSFTISFLMPMLVMLLATILSKKMINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIM 81
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 688074701  82 KFSNLMIWTSTtlFFILILLGGLYHEWNQGALQW 115
Cdd:MTH00203  81 QLSSLSLLLAF--LFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-115 6.23e-16

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 67.84  E-value: 6.23e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   2 MTLLMSFTISFLMPMLVMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIM 81
Cdd:COG0838    6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                         90       100       110
                 ....*....|....*....|....*....|....
gi 688074701  82 KFSNLMIWTStTLFFILILLGGLYHEWNQGALQW 115
Cdd:COG0838   85 RELGWFGLIE-MLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 10-116 9.46e-16

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 67.58  E-value: 9.46e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701  10 ISFLMPMLVMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMKFSNLMIW 89
Cdd:PRK06602  17 VAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGF 95

                         90       100
                 ....*....|....*....|....*..
gi 688074701  90 TStTLFFILILLGGLYHEWNQGALQWA 116
Cdd:PRK06602  96 VE-AMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-115 8.56e-14

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 62.39  E-value: 8.56e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   2 MTLLMSFTISFLMPMLVMLLATILSKKmINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIM 81
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLY 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 688074701  82 KFSNLM-IWTSTTLFFILILlgGLYHEWNQGALQW 115
Cdd:MTH00018  80 NQIAPFgFWTMVGFLFILTL--GLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 2.58e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 61.26  E-value: 2.58e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMKFSNLM-IWtsTTLFFILILLGGLYHEWNQ 110
Cdd:MTH00055  35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFgFW--VMYLFLIILTIGLIYEWVK 112


                 ....*
gi 688074701 111 GALQW 115
Cdd:MTH00055 113 GGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 6.02e-10

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 52.63  E-value: 6.02e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMKFSNLM-IWTSTTlfFILILLGGLYHEWNQ 110
Cdd:MTH00030  40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIK 117


                 ....*
gi 688074701 111 GALQW 115
Cdd:MTH00030 118 GGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 3-115 1.78e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 48.83  E-value: 1.78e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   3 TLLMSFTISFLMPMLVMLLATILSKKMINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIiiMK 82
Cdd:CHL00022   9 IFWAFLIISSLIPILAFLISGLLAPISKGP-EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWA--MS 85

                         90       100       110
                 ....*....|....*....|....*....|....
gi 688074701  83 FSNLMIWTST-TLFFILILLGGLYHEWNQGALQW 115
Cdd:CHL00022  86 FDVLGVSAFIeALIFVLILIVGLVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 1.76e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 37.95  E-value: 1.76e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   1 MMTLLMSFTISFLMPMLVMLLATILSKKMiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIII 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 688074701  81 MKFSNLMIWtsttlFFILILLGGLYHEWNQGALQW 115
Cdd:MTH00092  80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
10-115 2.71e-04

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 37.80  E-value: 2.71e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701  10 ISFLMPMLVMLLATILSKKMINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDIEIALILPIIIIMKFSNLMIW 89
Cdd:PRK07756  18 LGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFAL 96

                         90       100
                 ....*....|....*....|....*.
gi 688074701  90 TStTLFFILILLGGLYHEWNQGALQW 115
Cdd:PRK07756  97 IE-MLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
8-115 7.33e-04

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 36.57  E-value: 7.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688074701   8 FTISFLMPMLVMLLATILSKKMIN---DREKSSPFECGFDP-KSSARMpfSLRFFLIAVIFLIFDIEIALILPIIIIMKF 83
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                         90       100       110
                 ....*....|....*....|....*....|..
gi 688074701  84 SNLMIWTStTLFFILILLGGLYHEWNQGALQW 115
Cdd:PRK08489  95 LGLFGLIE-MLLFIVLLTIGFIYAWKKGALEW 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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