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Conserved domains on  [gi|726972114|ref|YP_009109750|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Primolius couloni]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.77e-40

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 128.81  E-value: 1.77e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 726972114 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.77e-40

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 128.81  E-value: 1.77e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 726972114 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.60e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 62.97  E-value: 1.60e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  11 AFTLSSLGLAFHRvHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 726972114  91 QNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 11-96 2.67e-03

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 33.88  E-value: 2.67e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114 11 AFTLSSLGL--AFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSD 88
Cdd:COG0713  10 AAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVALYRNRGTI 89


                ....*...
gi 726972114 89 HLQNLNLL 96
Cdd:COG0713  90 DVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.77e-40

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 128.81  E-value: 1.77e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 726972114 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 8.16e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 122.00  E-value: 8.16e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00126  1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                        90
                ....*....|....*...
gi 726972114 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00126 81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.47e-37

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 121.63  E-value: 1.47e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00067  1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                        90
                ....*....|....*...
gi 726972114 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00067 81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.22e-24

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 88.83  E-value: 1.22e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00107  1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                        90
                ....*....|....*...
gi 726972114 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00107 81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 6-96 5.30e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 76.91  E-value: 5.30e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  6 LSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTH 85
Cdd:MTH00181  3 FVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNRTH 82

                        90
                ....*....|.
gi 726972114 86 GSDHLQNLNLL 96
Cdd:MTH00181 83 GSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 5.23e-17

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 69.56  E-value: 5.23e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00043  1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                        90
                ....*....|....*..
gi 726972114 81 STRTHGSDHLQNLNLLQ 97
Cdd:MTH00043 81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 1.60e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 62.97  E-value: 1.60e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  11 AFTLSSLGLAFHRvHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSDHL 90
Cdd:pfam00420  9 LFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 726972114  91 QNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-98 7.56e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.44  E-value: 7.56e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSL-GLAFHRVHLVSALLCLESMMLSMYIALSTWPIEnqTPSSSLTPILMLTFSACEAGTGLAMLV 79
Cdd:MTH00188  1 MFFSMILVILLFVVLGLfTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSY--MEKELYLSLVLLTFAACEASVGLALLV 78

                        90
                ....*....|....*....
gi 726972114 80 ASTRTHGSDHLQNLNLLQC 98
Cdd:MTH00188 79 SLIRSHGSDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.36e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 45.22  E-value: 1.36e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  1 MSFLRLSFCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTwpIENQTPSSSLTPILMLTFSACEAGTGLAMLVA 80
Cdd:MTH00149  2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFS--SSGLISFSSYLFLIILTFGACEASLGLSLLVS 79

                        90
                ....*....|....*...
gi 726972114 81 STRTHGSDHLQNLNLLQC 98
Cdd:MTH00149 80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-92 7.89e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 43.22  E-value: 7.89e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114 12 FTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQtpSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:MTH00162 11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFN--YELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFS 88


                .
gi 726972114 92 N 92
Cdd:MTH00162 89 S 89
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.77e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 42.33  E-value: 1.77e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114 12 FTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:MTH00180 13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                ....*.
gi 726972114 92 NLNLLQ 97
Cdd:MTH00180 93 SLNLLR 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 8-98 3.14e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 41.66  E-value: 3.14e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  8 FCSAFTLSSLGLAFHRVHLVSALLCLESMMLSMYIaLSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGS 87
Cdd:MTH00013  8 LSISPFISMFNLSLQRKHLLMSLLSLEAMILSLAL-FIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGN 86

                        90
                ....*....|.
gi 726972114 88 DHLQNLNLLQC 98
Cdd:MTH00013 87 DMLKSLTSNKC 97
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.04e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 40.43  E-value: 1.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114 12 FTLSSLGLAFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:MTH00001 13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                ....*.
gi 726972114 92 NLNLLQ 97
Cdd:MTH00001 93 SLNSLR 98
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 56-98 1.41e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 41.86  E-value: 1.41e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 726972114  56 SSLTPILMLTFSACEAGTGLAMLVASTRTHGSDHLQNLNLLQC 98
Cdd:MTH00127 390 SPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
12-96 2.66e-04

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 36.69  E-value: 2.66e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114  12 FTLSSLGLaFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSDHLQ 91
Cdd:PRK05715  15 FCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRGTIDVD 93


                 ....*
gi 726972114  92 NLNLL 96
Cdd:PRK05715  94 DLNEL 98
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 11-96 2.67e-03

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 33.88  E-value: 2.67e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972114 11 AFTLSSLGL--AFHRVHLVSALLCLESMMLSMYIALSTWPIENQTPSSSLTPILMLTFSACEAGTGLAMLVASTRTHGSD 88
Cdd:COG0713  10 AAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVALYRNRGTI 89


                ....*...
gi 726972114 89 HLQNLNLL 96
Cdd:COG0713  90 DVDDLNEL 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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