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Conserved domains on  [gi|927372413|ref|YP_009164695|]
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ATP synthase F0 subunit 8 (mitochondrion) [Nestor notabilis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 super family cl03008
ATP synthase F0 subunit 8; Provisional
 1-30 7.16e-07

ATP synthase F0 subunit 8; Provisional


The actual alignment was detected with superfamily member MTH00133:

Pssm-ID: 470718  Cd Length: 55  Bit Score: 40.63  E-value: 7.16e-07
                        10        20        30
                ....*....|....*....|....*....|
gi 927372413  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLS 30
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLA 30
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-30 7.16e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 40.63  E-value: 7.16e-07
                        10        20        30
                ....*....|....*....|....*....|
gi 927372413  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLS 30
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLA 30
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-31 6.68e-03

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 30.77  E-value: 6.68e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 927372413   1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSF 31
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSH 31
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-30 7.16e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 40.63  E-value: 7.16e-07
                        10        20        30
                ....*....|....*....|....*....|
gi 927372413  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLS 30
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLA 30
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-31 2.56e-06

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 39.48  E-value: 2.56e-06
                        10        20        30
                ....*....|....*....|....*....|.
gi 927372413  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSF 31
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSF 31
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-31 2.10e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 31.87  E-value: 2.10e-03
                        10        20        30
                ....*....|....*....|....*....|.
gi 927372413  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSF 31
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNH 31
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-31 6.68e-03

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 30.77  E-value: 6.68e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 927372413   1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSF 31
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSH 31
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-31 6.74e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 30.79  E-value: 6.74e-03
                        10        20        30
                ....*....|....*....|....*....|.
gi 927372413  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSF 31
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKH 31
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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