|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
1.39e-91 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 276.32 E-value: 1.39e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILIQSGKNFFwe 80
Cdd:MTH00160 8 LLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLMLF-- 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 81 etNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCLKMNYsIIIFSILSVWVGALGGL 160
Cdd:MTH00160 86 --NNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNF-IIIIIILSAIIGAIGGL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 161 NQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFITLLS 240
Cdd:MTH00160 163 NQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 241 LGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFMMSTNEIKWNFNMtKSNLLTYSLGIMTMI 320
Cdd:MTH00160 243 LGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK-KKNKFSLILNFLSFI 321
|
330
....*....|...
gi 938339312 321 SSLGLMLASTVLI 333
Cdd:MTH00160 322 SLFGLILSSLLFL 334
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
2.69e-68 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 217.41 E-value: 2.69e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSII--LIQSGKNFF 78
Cdd:MTH00105 7 IIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIinLMYSGQWTI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 79 WEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVM---SYCLKMNYsIIIFSILSVWVG 155
Cdd:MTH00105 87 TKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILyqiSPSINPNL-LLTLAILSILIG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 156 ALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIF 235
Cdd:MTH00105 166 GWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLIL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 236 ITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFM-----MSTNEIKWNFNMTKSNLL 310
Cdd:MTH00105 246 LTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLtmfpsTNNMKMKWQFENTKPMTL 325
|
330 340
....*....|....*....|...
gi 938339312 311 tysLGIMTMISSLGLMLASTVLI 333
Cdd:MTH00105 326 ---LPTLIILSTMLLPLTPMLSI 345
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-332 |
3.16e-66 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 211.99 E-value: 3.16e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIIL--IQSGKNFF 78
Cdd:MTH00112 7 LIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTnaWNTGQWDI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 79 WEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVM-SYCLKMNYSIIIFS-ILSVWVGA 156
Cdd:MTH00112 87 TQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLlMTSNSLNPTLLLTLaILSTLIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 157 LGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFI 236
Cdd:MTH00112 167 WGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 237 TLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFM-----MSTNEIKWNFNMTKSNLLT 311
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTItlppnTTNMMMKWRTKPKKNTLTA 326
|
330 340
....*....|....*....|.
gi 938339312 312 yslgIMTMISSLGLMLASTVL 332
Cdd:MTH00112 327 ----TLTTLSTLLLPLSPMIL 343
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-332 |
1.81e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 197.07 E-value: 1.81e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIIL--IQSGKNFF 78
Cdd:MTH00070 7 SILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTInaWFTGEWTI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 79 WEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTV--MSYCLKMNYSIIIFSILSVWVGA 156
Cdd:MTH00070 87 MNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALliQISHLLNSNLLIIMGLLSTLIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 157 LGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFI 236
Cdd:MTH00070 167 WGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMML 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 237 TLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFM-----MSTNEIKWNFNMTKSNLLT 311
Cdd:MTH00070 247 TLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLttspnTSNSKLYWRFKNKTNNLLS 326
|
330 340
....*....|....*....|.
gi 938339312 312 yslgIMTMISSLGLMLASTVL 332
Cdd:MTH00070 327 ----LTIILSLMLLPITPTIL 343
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-332 |
2.67e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 191.56 E-value: 2.67e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIIL--IQSGKNFF 78
Cdd:MTH00135 7 TILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTnaWLTGQWDI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 79 WEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCLKMNYSIIIF-SILSVWVGAL 157
Cdd:MTH00135 87 QQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITlGLTSTLVGGW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 158 GGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFIT 237
Cdd:MTH00135 167 GGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLI 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 238 LLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISF-VAFMMSTNeikwNFNMT-----KSNLLT 311
Cdd:MTH00135 247 LLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYaMTLTISPN----TLNGTtpwrlPSTQLT 322
|
330 340
....*....|....*....|.
gi 938339312 312 YSLGIMTMISSLGLMLASTVL 332
Cdd:MTH00135 323 LPLAISTTATLMLLPLTPAIL 343
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-327 |
8.45e-58 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 190.14 E-value: 8.45e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSiILIQSGKNFFW- 79
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNG-ALIQAWLSGSWs 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 80 --EETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYC--LKMNYSIIIFSILSVWVG 155
Cdd:MTH00041 86 inGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIsnLLNSNILILCGILSVLVG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 156 ALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIF 235
Cdd:MTH00041 166 GWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 236 ITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFMMSTNEIKWNFNMTKSNLLTYSLG 315
Cdd:MTH00041 246 LSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYG 325
|
330
....*....|..
gi 938339312 316 IMTMISSLGLML 327
Cdd:MTH00041 326 VILSILSSISIL 337
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-310 |
7.07e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 179.31 E-value: 7.07e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILiqsgknFFWE 80
Cdd:MTH00144 7 LLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLI------MYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 81 ETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCL---KMNYSIIIFSILSVWVGAL 157
Cdd:MTH00144 81 SFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLdlyWLAYLLCVISVLSALVGSI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 158 GGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNeNIINKFMIFIT 237
Cdd:MTH00144 161 GGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKP-SYKTGLSIISL 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339312 238 LLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFMMSTNEIKWNFNMTKSNLL 310
Cdd:MTH00144 240 LLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-332 |
7.69e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 177.08 E-value: 7.69e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIIL--IQSGKNFF 78
Cdd:MTH00200 7 PLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLnaWTSGQWGI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 79 WEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMS--YCLKMNYSIIIFSILSVWVGA 156
Cdd:MTH00200 87 SEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIqlAPALNSNILLLLGLLSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 157 LGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFI 236
Cdd:MTH00200 167 WGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 237 TLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFV-AFMMSTNEIKWNFNMTKSNLLTYSLG 315
Cdd:MTH00200 247 TLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLtLLTLSPNQINMMSSWRTKSNSNLLVG 326
|
330
....*....|....*..
gi 938339312 316 IMTMISSLGLMLASTVL 332
Cdd:MTH00200 327 LLLLLSILGLPLTPQLL 343
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
1-317 |
1.28e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 168.31 E-value: 1.28e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILIQSGKNFFwe 80
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLS-- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 81 etnNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCLKMNYSIIIFSILSVWVGALGGL 160
Cdd:MTH00197 79 ---LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 161 NQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFITLLS 240
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 938339312 241 LGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFMMSTNEIKWNFNMTKSNLLTYSLGIM 317
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLMM 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
2.01e-48 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 165.34 E-value: 2.01e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILIQsgknFFWE 80
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMW----SFPS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 81 ETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCLKMNYSIIIFSI--LSVWVGALG 158
Cdd:MTH00011 85 LLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMaaMSALAGGLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 159 GLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFITL 238
Cdd:MTH00011 165 GMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIML 244
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339312 239 LSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFMMSTNEIKWNFNMTKSNLL 310
Cdd:MTH00011 245 LSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTK 316
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-292 |
4.60e-29 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 116.37 E-value: 4.60e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMmGSMLSVSSNSWLGVWMGLEINMLSFIPLMS-NSKNTMMNETSIKYFIIQALASTMLLFSIILI-------- 71
Cdd:COG1007 106 ALLLFATL-GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLygatgsln 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 72 --QSGKNFFWEETNN----ISMLLIISSLMMKLGAAPFHFWFPEI-----------MSASSWMNCFILMTwqKIAPMTVM 134
Cdd:COG1007 185 laGIAAALAAGGANSplllLGLVLVLAGLAFKLSAVPFHMWTPDVyegaptpvtafLATAPKIAAFAALL--RLLVEAFP 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 135 SYCLKMNYSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMA------SMGVNEIMwqLYFIVYSMLSL----V 204
Cdd:COG1007 263 GLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLglaagtPLGVSAAL--FYLLAYLFMNLgafaV 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 205 MTMMfnENKLFFMNQLFNYNNENIINK---FMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLY 281
Cdd:COG1007 341 ILLL--SRKGGEAEEIEDLAGLARRSPllaLAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAY 418
|
330
....*....|.
gi 938339312 282 YYLRISFVAFM 292
Cdd:COG1007 419 YYLRVVKAMYF 429
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
17-276 |
2.34e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 111.25 E-value: 2.34e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 17 SNSWLGVWMGLEINMLSFIPLM-SNSKNTMMNETSIKYFIIQALASTMLLFSIILI--QSGKNFFWEE-----------T 82
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMynYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 83 NNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMN-CFILMTWQKIAPMTVMSYCL-------KMNYSIIIFSILSVWV 154
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIRRSLlylpsspFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 155 GALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIM----WQLYFIVYSMLS-----LVMTMMFNENKLFFMNQLFNYNN 225
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSaglflCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 938339312 226 ENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILT 276
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
9-286 |
1.25e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.89 E-value: 1.25e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 9 MGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMN-ETSIKYFIIQALASTMLLFS---------------IILIQ 72
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSaEAGLKYFVLGALSSGLFLFGcallcgttgglhlsyINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 73 SGKNFFWEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIApmtVMSYCLKMNYSIIIF---SI 149
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG---IFSILVSIGLNVNILligGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 150 LSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEI-------MWQLYFIVYSMLSLVMTMMFNENKLFFMnQLFN 222
Cdd:MTH00196 161 FSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiqaslVYLFIYIIMSICVFSIILALNVYKNLII-EFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339312 223 YNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRI 286
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-292 |
1.81e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.84 E-value: 1.81e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 10 GSMLSVSSNSWLGVWMGLEINML-SFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILI----------QSGKNFF 78
Cdd:PRK05777 115 GMMVMVSANDLLTLFLGLELLSLpLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLygatgslsfaGIAKALA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 79 WEETNN----ISMLLIISSLMMKLGAAPFHFWFPEI-----------MSASSWMNCFILMTwqKIAPMTVMSYCLKMNYS 143
Cdd:PRK05777 195 DGSGNSllllFGLVFLLVGLAFKLSAVPFHMWTPDVyegaptpvtafLATAPKIAAFAVLL--RLLVVAFGGLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 144 IIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMA------SMGVNEIMwqLYFIVYSMLSL----VMTMMfnENK 213
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaagtAEGYSAVL--FYLLAYLFMTLgafgVISLL--RRK 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 214 LFFMNQLFNYNNENIINKFMIF---ITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVA 290
Cdd:PRK05777 349 GGEAESISDFAGLSKRSPLLAAvmtIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLM 428
|
..
gi 938339312 291 FM 292
Cdd:PRK05777 429 YF 430
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-323 |
3.08e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.11 E-value: 3.08e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 10 GSMLSVSSNSWLGVWMGLEINMLSFIPLMSNS-KNTMMNETSIKYFIIQALASTMLLF--SIILIQSG-------KNFFW 79
Cdd:TIGR01770 114 GIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKrKSRFSTEAGLKYFILGAFSSGLLLFgiSLIYGFTGslnfedlLLFLS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 80 EETNNISML-----LIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAP----MTVMSYCLKMNYSII----- 145
Cdd:TIGR01770 194 NGMLNISLLllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIfavfLRLFLYILFGFSEAWqifla 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 146 IFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTM----------MFNENKLF 215
Cdd:TIGR01770 274 IIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLgafgvlsllrSYKDEWIE 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 216 FMNQLFNYNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFMMST 295
Cdd:TIGR01770 354 YISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKP 433
|
330 340
....*....|....*....|....*...
gi 938339312 296 NEIKWNFNMTKSNLLTYSLGIMTMISSL 323
Cdd:TIGR01770 434 ERRIPSNPQSKAQSLLLSISALFILFLG 461
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
9-286 |
1.55e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 100.48 E-value: 1.55e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 9 MGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMN-ETSIKYFIIQALASTMLLFSIILIQ--SGKNFFWEE---- 81
Cdd:MTH00199 108 LGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYStEAGLKYFVLGAVSSGLFLFGCALLYglTGETSIQGInsil 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 82 TNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCLKMNYSIIIFSILSVWVGALGGLN 161
Cdd:MTH00199 188 TGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVLSIIYGAIGALN 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 162 QTSLRQLMAYSSISHIGWMMASMGVN---EIMWQL-YFIVYSMLSLVMTMMFNENKLF--FMNQLFNYNNENIINKFMIF 235
Cdd:MTH00199 268 QTKIKRLLAYSGIGHMGFILFGVAIGsfeSIQASLiYMIIYVIMSICSFSIILSLKLTkgLIVEVSGLSRKNPVIALTLA 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 938339312 236 ITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRI 286
Cdd:MTH00199 348 LTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-286 |
1.49e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 83.37 E-value: 1.49e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 9 MGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMN---------ETSIKYFIIQALASTMLLFSIIL--------- 70
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 71 ----IQSGKnffwEETNNISM-------LLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCLK 139
Cdd:MTH00198 279 mlgtILSAT----LETTNIELrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVI 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 140 MNYSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMM--ASMGVNEIM-----WQLYFIVYSMLSLVMTMMFNE- 211
Cdd:MTH00198 355 TSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILigVSAGTYESLqaswtYAVTYLVSALASFTVICTLEEf 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 212 -----------NKLFFMNQLFNYNNENIINK------FMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTI--- 271
Cdd:MTH00198 435 gtrtptsrqrdGSFGNYNLVRRLVDLTILSRgqpyiaFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIyyl 514
|
330
....*....|....*....
gi 938339312 272 ----MVILTIITLYYYLRI 286
Cdd:MTH00198 515 valfAIICTCISAFYYIRI 533
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-290 |
1.68e-15 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 76.72 E-value: 1.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 3 FLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILI-QSGKNFFWEE 81
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 82 -----------TNNISMLLIISSLMMKLGAAPFHFWFPEIMS-ASSWMNCF------------ILMTWQKIAPMTVMSYc 137
Cdd:COG0651 192 laarlaeldpgLLLAAFALLLVGFGIKAALFPLHFWLPDAYPaAPSPVSALlsglltkvgvyaILRVLTLLFGADPALF- 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 138 lkMNYSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNE---IMWQLYFIVYSMlsLVMTMMF----- 209
Cdd:COG0651 271 --LGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTplgLAGALFHLLNHA--LAKALLFlaaga 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 210 -----NENKLFFMNQLFNYnneNIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYL 284
Cdd:COG0651 347 ieratGTRDLDKLGGLGKR---MPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFV 423
|
....*.
gi 938339312 285 RISFVA 290
Cdd:COG0651 424 RIFGRA 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-292 |
7.58e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 75.13 E-value: 7.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 48 ETSIKYFIIQALASTMLLFSIILIQSGKN------------FFWEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSAS- 114
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGIALLYGQYGtlnmaylavkmsENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAp 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 115 SWMNCFILMTWQ----KIAPMTVMSYCLKMN-----YSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWM----- 180
Cdd:PRK08376 252 SSISAMLLVIKQaglyALARVLFSIYGPAINlatvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMllglg 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 181 ----------MASMGVNEIMWQLYFIV-----YSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFITLLSLGGLP 245
Cdd:PRK08376 332 vglaalgdpaMASYGEIALAGGIYHIVnhalyKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLP 411
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 938339312 246 PFLGFLPKWMVMQTMMEMGlSMMTTIMVILTIITLYYYLRISFVAFM 292
Cdd:PRK08376 412 PFNGFASKWLIYESSALFN-PILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-286 |
9.37e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.80 E-value: 9.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMM-NETSIKYFIIQALASTMLLFSIIL---IQSGKN 76
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRsNEATMKYLLMGGASSSILVYGFSWlygLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 77 FFWEETNN-------------ISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVMSYCLKMNYS 143
Cdd:CHL00049 194 ELQEIVNGlintqmynspgisIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 144 II---------IFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLY-FIVYSMLSLVMTM-MFNEN 212
Cdd:CHL00049 274 FSsnewhllleILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYAsMITYMLFYIFMNLgTFACI 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 213 KLFFM----NQLFNYNNENIINKFMIF---ITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLR 285
Cdd:CHL00049 354 VLFGLrtgtDNIRDYAGLYTKDPFLALslaLCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLK 433
|
.
gi 938339312 286 I 286
Cdd:CHL00049 434 I 434
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-292 |
5.12e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.36 E-value: 5.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 27 LEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILI----------QSGKNFFWEETNNISMLLIISSLMM 96
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLygvtgtlnmaDLAGALAENPTVVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 97 KLGAAPFHFWFPEIMS-ASSWMNCFILMTWQKIA---------PMTVMSYCLKMNYSIII--FSILSVWVGALGGLNQTS 164
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPaAPPVVTALLSGLVTKVAvyaliriyfTVFGGDFRFALGLGWLLavLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 165 LRQLMAYSSISHIGWMMASMGVN---EIMWQLYFIVYSML---SLVMT-----MMFNENKLFFMNQLFNynnENIINKFM 233
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLtplALAAGLLHLLHHALmkgALFLAagaieVTYGTRRLSELSGLGR---RMPLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 938339312 234 IFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFM 292
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFF 430
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
144-291 |
1.00e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 62.66 E-value: 1.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 144 IIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNE---IMWQLYFIVYSMLslVMTMMF----------N 210
Cdd:PRK12663 275 LATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTpagINGAIFYLVHDMV--VKTALFliagslvrltG 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 211 ENKLFFMNQLfnYNNENIINkFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVA 290
Cdd:PRK12663 353 YRSLQYLGGL--YRKEPLFG-ALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLA 429
|
.
gi 938339312 291 F 291
Cdd:PRK12663 430 Y 430
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
144-291 |
8.53e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 59.60 E-value: 8.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 144 IIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVY--------SMLSLVMTMMFNENKLF 215
Cdd:PRK12667 298 LIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHiinhaiakSLLFLASGVFIHAAGTR 377
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339312 216 FMNQLFNYNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAF 291
Cdd:PRK12667 378 DIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLF 453
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
48-292 |
1.26e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 55.81 E-value: 1.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 48 ETSIKYFIIQALASTMLLFSIIL---------IQSGKNFFWEETNN----ISMLLIISSLMMKLGAAPFHFWFPEIMSAS 114
Cdd:PRK06277 150 KAALKYMILGNVAGSILLLGIGFllastgtlnITDIHNALLVNPTSpviyGGLLLLIFGLLYGSGLPPFHTIKSDIYAKA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 115 SWMNCFILMTWQKIAPMTVMSYCLKMNYS----------IIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASM 184
Cdd:PRK06277 230 KPFGSALLQTFSKFVLVALMLVIFKLFGGlsyfpsaqgvLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 185 G--------------VNEImwqlyfIVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFITLLSLGGLPPFLGF 250
Cdd:PRK06277 310 AlgtplgivagifhaINHV------IYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGF 383
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 938339312 251 LPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVAFM 292
Cdd:PRK06277 384 QSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYL 425
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
78-291 |
1.55e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 56.20 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 78 FWEE----TNNISMLLIISSLMmKLGAAPFHFWFPEIMSASSWMNCFIlmtwqKIAPMTVMSYCLKMNYSIIiFSILSVW 153
Cdd:PRK12650 199 VWAEkpglTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFL-----HAAAVVKAGIYLLLRFSPV-FHDVAVW 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 154 -------------VGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSML------SLVMTM--MFNEN 212
Cdd:PRK12650 272 nwlliivgmitalMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAhalfksSLFMLIgvVDHQA 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 213 KLFFMNQLFNYNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMME-----MGLSMMTTIMVILTIITLYYYLRIS 287
Cdd:PRK12650 352 GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEapggnAGVVLLLVGAALGAVFTFAYSARLV 431
|
....
gi 938339312 288 FVAF 291
Cdd:PRK12650 432 LGAF 435
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
47-297 |
1.93e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 55.44 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 47 NETSIKYFIIQALASTMLLFSIILIQ--SGKNFFWEETNN-----------ISMLLIISSLMMKLGAAPFHFWFPEIMSA 113
Cdd:PRK02504 160 NEAALKYLLIGAASSAIFLYGSSLLYglSGGSTQLSAIALalitspslglaLALVFVIAGIAFKISAVPFHQWTPDVYEG 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 114 SSWMNCFILMTWQKIAPMTVMSYCLKMNYSII------IFSILSVWVGALG---GLNQTSLRQLMAYSSISHIGWMMASM 184
Cdd:PRK02504 240 SPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFdeqwklLFTALAILSMVLGnvvALAQTSMKRMLAYSSIGQAGFVMIGL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 185 GVNEIMWQLYFIVYSMLSLVMTM-MFNENKLFFM----NQLFNYNNENIINKFMIF---ITLLSLGGLPPFLGFLPKWMV 256
Cdd:PRK02504 320 VAGTEAGYASMVFYLLAYLFMNLgAFACVILFSLrtgtDQISDYAGLYQKDPLLTLglsLCLLSLGGIPPLAGFFGKIYL 399
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 938339312 257 MQTMMEMGLSMMTTIMVILTIITLYYYLRisfVAFMMSTNE 297
Cdd:PRK02504 400 FWAGWQAGLYLLVLVGLVTSVISIYYYIR---VIKMMVVKE 437
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-286 |
2.57e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 55.39 E-value: 2.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 2 LFLSSLMMGSMLSVSSNSWLGVWMGLEINMLS--FIPLMSNSKNtmmNETSIKYFIIQALASTMLLFSIILI-------- 71
Cdd:PRK08668 102 MFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfMMVPMGKKES---RKASLKYFVLSAIGAYAMLYAIFLIyaktgtfd 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 72 -QSGKNFFWEETNN----ISMLLIISSLMMKLGAAPFHFWFPEIMSASS-------------------WMNCFILMTWQK 127
Cdd:PRK08668 179 fADISQGLINDTSTgfalIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPqsfsavlsgqlsklgaygfLLVLYVLPGTKL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 128 IAPMTVMSYCLKMNYSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGvneIMWQLYF-----------I 196
Cdd:PRK08668 259 FSEFGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLG---LGTSLGFagglfhvfnhaL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 197 VYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILT 276
Cdd:PRK08668 336 FKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGS 415
|
330
....*....|
gi 938339312 277 IITLYYYLRI 286
Cdd:PRK08668 416 IGSFLYVFRP 425
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
142-325 |
8.89e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 50.33 E-value: 8.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 142 YSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNE---IMWQLYFIVYSMLslVMTMMFnenklFFMN 218
Cdd:PRK07691 276 YLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTesgMIGAIYYLIHDMI--VKAALF-----LLIG 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 219 QLFNYNNENIINKF------------MIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRI 286
Cdd:PRK07691 349 IMIKITGTTDLKKMgglikrypvlgwMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
170 180 190
....*....|....*....|....*....|....*....
gi 938339312 287 SFVAFMMSTNEIKWNFNMTKSNLLTYSLGIMTMISSLGL 325
Cdd:PRK07691 429 FLKGFWGEPKGYDLNNKVPVKKLLLPAVVLVAITILYGL 467
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-333 |
3.48e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 48.27 E-value: 3.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 3 FLSSLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILI----------Q 72
Cdd:PRK06589 121 FFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILiytktgnldfV 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 73 SGKNFfwEETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFI---------LMTWQKIAPMT----VMSYCLK 139
Cdd:PRK06589 201 SGGLF--SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLhavivvktgLFCIYKILLYIfglsYLQRIFA 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 140 MNYSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMA--------SMGVNEIMWQLYFIVYSMLSLVMTMMFNE 211
Cdd:PRK06589 279 EFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLsafiltpkALGAAILHLVSHSFAKICLFYSMGSIYSL 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 212 NKLFFMNQLFNYNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLS----MMTTIMVILTIITLYYYLRIS 287
Cdd:PRK06589 359 KKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPwlsiIVMLVVIASSILSALYLLKIL 438
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 938339312 288 FVAFMMSTNEikwNFNMTKSNLLTYSLGIMTMISSLGLMLASTVLI 333
Cdd:PRK06589 439 SSIYKPSLSE---NSFITKSLPYLMQISVITCCCALTLFYFIQILI 481
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
148-291 |
2.54e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 45.73 E-value: 2.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 148 SILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNE-------IMWQLYFI-VYSMLSLVMTMMFNENKLFFMNQ 219
Cdd:PRK12665 280 ALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvaglsgaIYYVAHHItVQTTLFLVVGLIERQAGSSSLRR 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 938339312 220 LFNYNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIM---VILTIITLYYYLRISFVAF 291
Cdd:PRK12665 360 LGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVaggVVTSLLTLYAVARVWTKAF 434
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
154-291 |
2.60e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.91 E-value: 2.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 154 VGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIV---YSMLSLVMT-----MMFNENKLFFMNQLFnynn 225
Cdd:COG1009 288 FAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLthaFFKALLFLGagsviHATGTRDIRKMGGLR---- 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339312 226 eniinKFM------IFITLLSLGGLPPFLGFLPKWMVMQTMMEMG-LSMMTTIMVILT-IITLYYYLRISFVAF 291
Cdd:COG1009 364 -----KKMpitaitFLIGALSLAGIPPFAGFFSKEAILEAALEAGgLGPLLLAVALLGaFLTAFYSFRLFFLVF 432
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-181 |
2.61e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 45.70 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 50 SIKYFIIQALASTMLLFSIILI--QSGKNFFWEETNNISMLLIISSLMM---------KLGAAPFHFWFPEIMSASSWMN 118
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFlaffiafavKVPLFPLHTWLPDAHVEAPTAG 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339312 119 CFILM-TWQKIAPMTVMSYCLKM--------NYSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMM 181
Cdd:TIGR01972 238 SVILAgVLLKMGTYGFLRFNLPLfpdaslyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
2-280 |
1.57e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 40.10 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 2 LFLSSlMMGSMLSVSSNSWLGVWMGLEInmLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILIQSGKNFFW-- 79
Cdd:PRK08667 119 LFILS-MLGVVASANTFSFLFFWEIMAL--SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEls 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 80 -----EETNNISMLLIISSLMMKLGAAPFHFWFPEIMSASSwMNCFILMTWQKIAP---------MTVMSYCLKMNYSII 145
Cdd:PRK08667 196 plgasAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASP-SNVSALMSGVMLKVavyglvrflMDVLSPELWWGVLIL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 146 IFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNEIMWQLYFIVYSMLSLVMTMMFNENKLFFMNQLF---- 221
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALLALGGALFHSLNHALFKSLLFltag 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339312 222 ---------NYNNENIINKFM------IFITLLSLGGLPPFLGFLPKWMVMQTMMEmGLSMMTTIMVILTIITL 280
Cdd:PRK08667 355 svvhatgtrNIEKMGGLVKLMpytsalFLVGAVSIAALPPFNGFASELLLYESFFQ-SFSVADPLIKILLFSVL 427
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
7-286 |
2.54e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.74 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 7 LMMGSMLS-VSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNET-SIKYFIIQALASTMLL--FSIILIQSGKNFFWE-- 80
Cdd:PRK12646 118 LFMFSMIGiVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFgAIQSFMITVFGGLALLvgFIMLYIMTGTNNITEil 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 81 -ETNNISM--LLIISSLMMKLGAA------PFHFWFPEIMSASSWMNCFI---------LMTWQKIAPmtVMSYCLKMNY 142
Cdd:PRK12646 198 gQADHIKNhgLFIPMIFMFLLGAFtksaqfPFHIWLPRAMAAPTPVSAYLhsatmvkagIFLLFRFTP--LLGLSNMYIY 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 143 SIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGV--------NEIMWQLY-FIVYSMLSLVMTMMFNENK 213
Cdd:PRK12646 276 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqhqQDAIASIYvFVLFAALFHLMNHAIFKCA 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 214 LFFMNQLFNYNN-----------ENIINKFMIFITL--LSLGGLPPFLGFLPKWMVMQTMMEMG---------LSMMTTI 271
Cdd:PRK12646 356 LFMGVGIIDHEAgtrdirilsgmRQLFPKMNLVMTIaaLSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisMIIIVFI 435
|
330
....*....|....*
gi 938339312 272 MVILTIITLYYYLRI 286
Cdd:PRK12646 436 GVIASIFTFTYALYM 450
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-262 |
3.26e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 38.95 E-value: 3.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 17 SNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILIQSG-------------KNFFWEETN 83
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAItgtlnmgdmfliiQDLPTNRAI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 84 NISMLLIISSLMMKLGAAPFHFWFPEIMSAS-SWMNCFILMTWQKIAPMTV------------MSYCLKMNYSIIIFSIL 150
Cdd:PRK12662 209 QIGVLFIMVGLFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKVMIYLIirivydvfkanfVFTTLPFNNVFMILAAL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 151 SVWVGALGGLNQTSLRQLMAYSSISHIGWMMASMGVNeimwqlyfiVYSMLSLVMTMMFN----ENKLFFMNQLFNYNNE 226
Cdd:PRK12662 289 AIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLN---------TYYGLAAAVAYIVNhsivKSALFMVSGSISYHFG 359
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 938339312 227 NI-------INKFMIFITL------LSLGGLPPFLGFLPKWMVMQTMME 262
Cdd:PRK12662 360 TTkledclnLWKSMPKITLafvllsLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
85-186 |
4.39e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 38.58 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 85 ISMLLIISSLMMKLGAAPFHFWFPEIMS-ASSWMNCFILMTWQKIAPMTVMSYCLKMNYS---------IIIFSILSVWV 154
Cdd:PRK08676 207 ASFLFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaaeqfsnvLIGLGIFSIAV 286
|
90 100 110
....*....|....*....|....*....|..
gi 938339312 155 GALGGLNQTSLRQLMAYSSISHIGWMMASMGV 186
Cdd:PRK08676 287 AAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGI 318
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
1-297 |
5.04e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.59 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 1 MLFLSsLMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNETSIKYFIIQALASTMLLFSIILIQSG------ 74
Cdd:PRK08377 112 MLFLL-LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGAtgtlnm 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 75 ------KNFFWEETNNISMLLIISSLMMKLGAAPFHFWFPE----------IMSASSWMNCFILMTWQKIAPMTVMSYCL 138
Cdd:PRK08377 191 ahiaqlAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDayqaaphpitVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 139 KMNYSIIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMASM------GVNEIMWQL--YFIVYSMLSLVMTMMFN 210
Cdd:PRK08377 271 SVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALalgtqaGVDAGVFHMinHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 211 ENKLFFMNQLFNYNNENIINKFMIFITLLSLGGLPPFLGFLPKWMVMQTMMEMGLSMMTTIMVILTIITLYYYLRISFVA 290
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTM 430
|
....*..
gi 938339312 291 FMMSTNE 297
Cdd:PRK08377 431 WFKGEGE 437
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
7-310 |
7.53e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 37.54 E-value: 7.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 7 LMMGSMLSVSSNSWLGVWMGLEINMLSFIPLMSNSKNTMMNetsikYFIIQALASTMLLFSiiliqsgknffweetnniS 86
Cdd:MTH00091 3 LSLLNFMSLNIFVWWSVFLLMTLLFVFLNKGMGSYSSLFNY-----FVLQESLGLLFLLFS------------------F 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 87 MLLIISSLMMKLGAAPFHFWFPEIMSASSWMNCFILMTWQKIAPMTVM-SYCLKMNYSIIIFSILsvwVGALGGLNQTSL 165
Cdd:MTH00091 60 GYFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLlQFFSKNFFFLLLFGLL---ICFFQMFLLKSY 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339312 166 RQLMAYSSISHIGWMMASMgvneimwqlyfiVYSMLSLVMTMMFNENKLFFMNQLFNYNNENIINKFMifiTLLSLGGLP 245
Cdd:MTH00091 137 KNLLILSSTESFNWLILSF------------FFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVSWE---TLLVFMNLP 201
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 938339312 246 PFLGFLPKWMVMQTMMemglSMMTTIMVILTIITLYYYLRISFVAFMMSTNEIKWNFNMTKSNLL 310
Cdd:MTH00091 202 FSVTFFVKIFSLSEIL----KVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFF 262
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
144-182 |
7.65e-03 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 37.75 E-value: 7.65e-03
10 20 30
....*....|....*....|....*....|....*....
gi 938339312 144 IIIFSILSVWVGALGGLNQTSLRQLMAYSSISHIGWMMA 182
Cdd:COG1008 278 LAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLL 316
|
|
|