NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|938339324|ref|YP_009171525|]
View 

NADH dehydrogenase subunit 1 (mitochondrion) [Pseudothericles compressifrons]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-310 2.19e-148

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.79  E-value: 2.19e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLM 86
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGY 166
Cdd:MTH00193  83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 167 NMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTL 246
Cdd:MTH00193 163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339324 247 IFLGGDFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIML 310
Cdd:MTH00193 243 MFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-310 2.19e-148

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.79  E-value: 2.19e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLM 86
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGY 166
Cdd:MTH00193  83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 167 NMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTL 246
Cdd:MTH00193 163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339324 247 IFLGGDFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIML 310
Cdd:MTH00193 243 MFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-304 1.17e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.74  E-value: 1.17e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   13 LLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMISLLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   93 IVFPY--ITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGYNMMD 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  171 FYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  251 G------DFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYI 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 2.92e-87

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 264.30  E-value: 2.92e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   4 DISMFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVI 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  84 SLMISLLVWIVFPYITYMC--SFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFI 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 162 LIGGYNMMDFYNYQ-CYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938339324 241 SMLLTLIFLGG-------DFFSVL-----FFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:COG1005  247 SALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-310 2.19e-148

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.79  E-value: 2.19e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLM 86
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGY 166
Cdd:MTH00193  83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 167 NMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTL 246
Cdd:MTH00193 163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339324 247 IFLGGDFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIML 310
Cdd:MTH00193 243 MFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-308 2.13e-125

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 360.50  E-value: 2.13e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLM 86
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGY 166
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 167 NMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTL 246
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339324 247 IFLGGDFFSVLFFF--KLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYII 308
Cdd:MTH00225 242 LFFGGFFVTIDLFLilKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 9-306 2.26e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 340.31  E-value: 2.26e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   9 ILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMIS 88
Cdd:MTH00143   4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  89 LLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGYNM 168
Cdd:MTH00143  84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 169 MDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLIF 248
Cdd:MTH00143 164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339324 249 LGGDFF-----SVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGY 306
Cdd:MTH00143 244 FGGSSVlfllgGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 9-313 8.87e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 300.67  E-value: 8.87e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   9 ILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMIS 88
Cdd:MTH00218   5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  89 LLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGYNM 168
Cdd:MTH00218  85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 169 MDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLIF 248
Cdd:MTH00218 165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 938339324 249 LGGDFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIMLISL 313
Cdd:MTH00218 245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 1.28e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 295.11  E-value: 1.28e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   5 ISMFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVIS 84
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  85 LMISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIG 164
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 165 GYNMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLL 244
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 938339324 245 TLIFLGGDfFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIML 310
Cdd:MTH00195 241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-313 2.14e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 292.68  E-value: 2.14e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   1 MLYDISMFIlNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFS 80
Cdd:MTH00071   1 MMTLISLII-NPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  81 PVISLMISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLF 160
Cdd:MTH00071  80 PTMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLI 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 161 ILIGGYNMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFM 240
Cdd:MTH00071 160 LLTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMM 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 241 SMLLTLIFLGGDFF-------SVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIMLISL 313
Cdd:MTH00071 240 NTLSTILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 9-313 3.13e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 292.18  E-value: 3.13e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   9 ILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMIS 88
Cdd:MTH00111   8 LINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  89 LLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGYNM 168
Cdd:MTH00111  88 LTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTL 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 169 MDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLIF 248
Cdd:MTH00111 168 QTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILF 247

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339324 249 L-------GGDFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIMLISL 313
Cdd:MTH00111 248 LnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-313 1.29e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 290.37  E-value: 1.29e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLM 86
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGY 166
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 167 NMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTL 246
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339324 247 IFLGG-------DFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIMLISL 313
Cdd:MTH00104 241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-310 5.59e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 281.48  E-value: 5.59e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLM 86
Cdd:MTH00040   5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGY 166
Cdd:MTH00040  85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 167 NMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTL 246
Cdd:MTH00040 165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 938339324 247 IFLGGDFFSVLFF--------FKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIML 310
Cdd:MTH00040 245 LFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
13-304 1.17e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.74  E-value: 1.17e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   13 LLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMISLLVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   93 IVFPY--ITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGYNMMD 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  171 FYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  251 G------DFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYI 304
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-313 1.57e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 280.34  E-value: 1.57e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   1 MLYDISMFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFS 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  81 PVISLMISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLF 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 161 ILIGGYNMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 241 SMLLTLIFLGGDFF-------SVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIMLISL 313
Cdd:MTH00134 241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 9.60e-90

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 270.11  E-value: 9.60e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   8 FILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMI 87
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  88 SLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGYN 167
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 168 MMDFYNYQcYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLI 247
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 938339324 248 FLG----GDFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYIIMLI 311
Cdd:MTH00010 244 FTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 2.92e-87

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 264.30  E-value: 2.92e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   4 DISMFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVI 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  84 SLMISLLVWIVFPYITYMC--SFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFI 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 162 LIGGYNMMDFYNYQ-CYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 938339324 241 SMLLTLIFLGG-------DFFSVL-----FFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:COG1005  247 SALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 1.64e-83

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 254.73  E-value: 1.64e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   5 ISMFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVIS 84
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  85 LMISLLVWIVFPY--ITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFIL 162
Cdd:PRK06076  89 FIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 163 IGGYNMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSM 242
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 938339324 243 LLTLIFLGGDFF----------SVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076 249 LITTLFLGGWLPpfplgggipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-302 6.70e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 250.81  E-value: 6.70e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   1 MLYDISMFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFS 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  81 PVISLMISLLVWIVFPYI--TYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 159 LFILIGGYNMMDFYNYQC-YCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 938339324 238 IFMSMLLTLIFLGG------DFF--SVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIF 302
Cdd:MTH00216 241 ILMSCLTTILFLGGwlspikYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-308 7.77e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 248.10  E-value: 7.77e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLM 86
Cdd:MTH00054   3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYIT--YMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIG 164
Cdd:MTH00054  83 LAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 165 GYNMMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLL 244
Cdd:MTH00054 163 SLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFG 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 938339324 245 TLIFLGGDFF----------SVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYIGYII 308
Cdd:MTH00054 243 VILFLGGWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 10-308 1.23e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 214.88  E-value: 1.23e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  10 LNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMISL 89
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  90 LVW--IVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIGGYN 167
Cdd:MTH00029  91 LAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 168 MMDFYNYQCYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLI 247
Cdd:MTH00029 171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 248 FLGG-----------------------DFFSVLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYI 304
Cdd:MTH00029 251 FLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330


                 ....
gi 938339324 305 GYII 308
Cdd:MTH00029 331 GILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-304 2.86e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 198.97  E-value: 2.86e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  11 NFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVISLMISLL 90
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  91 VWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILiggYNMMD 170
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLH---NNSFS 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 171 FYNYQCYCWFIVISMPLFLScvascLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLLTLIFLG 250
Cdd:MTH00090 158 FVSSFSLSLFVIYLPFLIMI-----IAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 938339324 251 gdfFSVLFFFklgLMSFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIFYI 304
Cdd:MTH00090 233 ---FSFLMLF---LIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFV 280
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 5-302 1.06e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 164.33  E-value: 1.06e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   5 ISMFILNFLLLMICVLVsVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSPVIS 84
Cdd:MTH00058   1 IFGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  85 LMISLLVWIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIG 164
Cdd:MTH00058  80 VLLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 165 GYNMMDFYNYQCYCWFIVisMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLL 244
Cdd:MTH00058 160 SYSLVDFYYSGWLSVLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 938339324 245 TLIFLGGDFFSVLFFFKLglmsFMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNYFIF 302
Cdd:MTH00058 238 SVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-297 9.62e-31

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 118.52  E-value: 9.62e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   2 LYDISMFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPNKVGFVGIPQPFSDAIKLITSEQPILIMSNYFMYYFSP 81
Cdd:CHL00032  23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  82 ---VISLMISLLVwIVFPYITYMCSFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLS 158
Cdd:CHL00032 103 siaVISILLSYLV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 159 LFILIGGYNMMDFYNYQC----YCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEY 234
Cdd:CHL00032 182 ISLLSNSLSTVDIVEAQSkygfWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASY 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 235 TSIIFMSMLLTLIFLGGDFFSVLFFFKLGLMS-----------------------FMFIWV--RGTLPRYRYDKLMYLAW 289
Cdd:CHL00032 262 LNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEinktggvfgttigifitlaktylFLFISIttRWTLPRLRMDQLLNLGW 341


                 ....*...
gi 938339324 290 KSFLPLSL 297
Cdd:CHL00032 342 KFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-293 2.57e-20

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 89.09  E-value: 2.57e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324   7 MFILNFLLLMICVLVSVAFLTLLERKILGYIQIRKGPnkvgfvGIPQPFSDAIKLItSEQPILIMSNYFMYYFSPVISLM 86
Cdd:COG0650    2 MLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLL-RKETVVPETASWLFRAAPYVALA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324  87 ISLLVWIVFPYITYMC--SFTYGFLFFLCCTSLGVYTVMIAGWSSNSNYALLGSLRSIAQTISYEVSLALILLSLFILIG 164
Cdd:COG0650   75 AMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 938339324 165 GYNMMDFYNYQ---CYCWFIVISMPLFLSCVASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMS 241
Cdd:COG0650  155 STSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLL 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 938339324 242 MLLTLIFLGGDFFS------VLFFFKLGLMSFMFIWVRGTLPRYRYDKLMYLAWKSFL 293
Cdd:COG0650  235 SLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH