|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 730.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFSNYYLGADRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 81 QNHLATEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 161 LVALSSMQAQNGTLSTHMMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 321 LTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 953245174 401 LITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELIWG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 648.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFSNYYLGADRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 81 QNHLATEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 161 LVALSSMQAQNGTLSTHMMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 321 LTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 401 LITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELIWGV 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 611.13 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFSNYYLGADRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 81 QNHLATEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 161 LVALSSMQAQNGTLSTHMMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 321 LTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 953245174 401 LITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELIWGVSY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 552.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELT-TFSNYYLGADRISAPLLTLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGwSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 80 SQNHLATEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 160 LLVALSSMQAQNGTLSTHMMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 240 GYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 320 GLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLG 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 400 TLITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELIWG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
7.82e-171 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 487.52 E-value: 7.82e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 3 KIIIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELT-TFSNYYLGADRISAPLLTLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGwSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 82 NHLATEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 162 VALSSMQAQNGTLSTHMMQLNQpamMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 242 GIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 322 TSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 953245174 402 ITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.80e-155 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 448.66 E-value: 1.80e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFS-NYYLGADRISAPLLTLSCWLTPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNlSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 80 SQNHLATEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 160 LLVALSSMQAQNGTLSTHMMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 240 GYGIIRITMTLD-PLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 319 HGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 953245174 399 GTLITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELI 454
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
3.24e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 363.32 E-value: 3.24e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPtimLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFSnYYLGADRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNIS-YFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 81 QNHLATEPISRKrtFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNL--FLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 161 LVALSSMQAQNGTLSTHMMqlnqpaMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLL------NFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 321 LTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 953245174 401 LITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-458 |
2.92e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 342.20 E-value: 2.92e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 52 SNYYLGADRISAPLLTLSCWLTPLMILASQNHLatEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLV 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSV--KLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 132 IITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPAMMNSWShsmWWLALLTAFMIKMPLYG 211
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGL---WGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSV 291
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 292 SHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 372 TINLMGELTIITSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKP 451
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
....*..
gi 953245174 452 ELIWGVS 458
Cdd:MTH00150 411 DLLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
7.81e-114 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 342.11 E-value: 7.81e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPtIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFSNYYLGADRISAPLLTLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 81 QNHLATEPISRkrTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 161 LVALSSMQAQNGTLSTHMMQLNQPAMMNSwshSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 241 YGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 321 LTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 953245174 401 LITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELI 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
5-454 |
3.23e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 325.01 E-value: 3.23e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 5 IIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFSNYYLGADRISAPLLTLSCWLTPLMILASQNHL 84
Cdd:MTH00205 2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 85 ATEpiSRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVAL 164
Cdd:MTH00205 82 KSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 165 SSMQAQNGTLSthmMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGII 244
Cdd:MTH00205 160 FFLNSLNFSLS---MFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 245 RITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSS 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 325 MLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTLITA 404
Cdd:MTH00205 317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 953245174 405 TYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELI 454
Cdd:MTH00205 397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
53-447 |
3.52e-82 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 261.94 E-value: 3.52e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 53 NYYLGADRISAPLLTLSCWLTPLMILASqnhlATEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVI 132
Cdd:COG1008 75 SYHLGVDGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLS---THMMQLNQPAMMNSWshsmWWLALLTAFMIKMPL 209
Cdd:COG1008 151 IGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiAELAAAPLPLTAQLL----LFLAFFIAFAVKVPM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 210 YGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPL-SKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAY 288
Cdd:COG1008 226 FPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 289 SSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMA 368
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 953245174 369 LPPTINLMGELTIITSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLL 447
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
2.22e-72 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 230.28 E-value: 2.22e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 112 ATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPAMMNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 192 HSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 272 TGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLA-NTNYERTHSRVLLLTRNMQL 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 953245174 351 LLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
53-404 |
3.42e-70 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 230.86 E-value: 3.42e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 53 NYYLGADRISAPLLTLSCWLTPLMILASQNHLATepisRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVI 132
Cdd:PRK05846 75 SYHLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSM----QAQNGTLSTH-MMQLNQPAMMNSWshsmWWLALLTAFMIKM 207
Cdd:PRK05846 151 IGVWGGK-NRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIAdLLNLPLPPGVQYW----LFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPL-SKTLSYPFMVMALWGVIMTGSICLRQTDLKSLI 286
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 287 AYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLL----LTRNMQLLLPLMglwwLLA 362
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIAdyggLAKVMPVLAAFF----LFF 381
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 953245174 363 SLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTLITA 404
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAA 423
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-404 |
8.87e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 229.44 E-value: 8.87e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 53 NYYLGADRISAPLLTLSCWLTPLMILASQNhlatEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVI 132
Cdd:TIGR01972 70 SYHLGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPamMNSWSHSMWWLALLTAFMIKMPLYGL 212
Cdd:TIGR01972 146 IGVWGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLP--LPFGVQTWLFLAFFIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDP-LSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSV 291
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 292 SHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPP 371
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350
....*....|....*....|....*....|...
gi 953245174 372 TINLMGELTIITSLFNWSNITILMTGLGTLITA 404
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAA 415
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
51-404 |
1.95e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 215.30 E-value: 1.95e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 51 FSNYYLGADRISAPLLTLSCWLTPLMILASQNHLAtepiSRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTL 130
Cdd:MTH00217 71 FGPVVFAVDGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMF 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 131 VIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTlsTHMMQLNQPAMMNSWSHSMWwLALLTAFMIKMPLY 210
Cdd:MTH00217 147 LIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGT--TDYQALCCLKIEKELQYFIF-LGFFLSLAIKIPKI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 211 GLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPF-MVMALWGVIMTGSICLRQTDLKSLIAYS 289
Cdd:MTH00217 224 PFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 290 SVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMAL 369
Cdd:MTH00217 304 SVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASI 383
|
330 340 350
....*....|....*....|....*....|....*
gi 953245174 370 PPTINLMGELTIITSLFNWSNITILMTGLGTLITA 404
Cdd:MTH00217 384 PLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSA 418
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
40-454 |
6.82e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 211.46 E-value: 6.82e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 40 QWFKPSMELTTFSNYYLGADRISAPLLTLSCWLTPLMILASQN---HLATEpisrkrtFITTITLLQISLIMAFSATELI 116
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 117 MFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLS-THMMQLNQPAMMNSWSHSMW 195
Cdd:MTH00204 136 LFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDyQILLNIKLPLSIQKWLLVGF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 196 WLALltafMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVM-ALWGVIMTGS 274
Cdd:MTH00204 216 FLSL----AVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlSVIAVIYGSL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 275 ICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPL 354
Cdd:MTH00204 292 TTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPL 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 355 MGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTLITATYTLYMLTTTQWGETPSHMKLIPPTHTREH 434
Cdd:MTH00204 372 FVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRREL 451
|
410 420
....*....|....*....|
gi 953245174 435 LLMMLHILPMTLLMTKPELI 454
Cdd:MTH00204 452 LAILPLIIAIFLLGIVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-404 |
1.63e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 208.24 E-value: 1.63e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 59 DRISAPLLTLSCWLTPLMILASQNHLATepisRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGN 138
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 139 QMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTlsTHMMQLNQPAMMNSWSHSMW-WLALLTAFMIKMPLYGLHLWLP 217
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGT--TDYLTLASCSHVVSEQTQKWiFLGIFLAMAVKIPIFPFHIWLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 218 KAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPL-SKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGL 296
Cdd:MTH00226 255 KAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 297 VIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLM 376
Cdd:MTH00226 335 VSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFI 414
|
330 340
....*....|....*....|....*...
gi 953245174 377 GELTIITSLFNWSNITILMTGLGTLITA 404
Cdd:MTH00226 415 GEYLSILSSFNWNPIIGVFVCSGVILSA 442
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-403 |
3.16e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 177.92 E-value: 3.16e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 53 NYYLGADRISAPLLTLSCWLTPLMILASQNhlatepISRK-RTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLV 131
Cdd:PRK12561 52 EWSLGVDGLSMPLVLLSGLITTLSIFASWK------VTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 132 IITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNqpamMNSWSHS---MWWLALLTAFMIKMP 208
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELG----AKSYPLAlelLLYAGFLIAFGVKLP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 209 LYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPfmVMALWGV--IMTGSIC-LRQTDLKSL 285
Cdd:PRK12561 201 IFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAP--ALAILGVvnIIYGALNaFAQDNVKRR 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 286 IAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLT 365
Cdd:PRK12561 279 LAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMA 358
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 953245174 366 NMALPPTINLMGELTI---ITSLFNWSN----ITILMTGLGTLIT 403
Cdd:PRK12561 359 SLALPGMSGFVSELTVflgITSSDVYSStfrtITILLAAVGLILT 403
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
101-395 |
1.81e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 165.46 E-value: 1.81e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 101 LLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLP-LLVALSSMQaqngtlsthMM 179
Cdd:MTH00094 70 LLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPfLFVYLKNFF---------FF 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 180 QLNQPAMMNSWshsMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRItmtLDPLSKTLSY 259
Cdd:MTH00094 141 SLCYFDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNN 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 260 PFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHS 339
Cdd:MTH00094 215 FWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKS 294
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 953245174 340 RVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILM 395
Cdd:MTH00094 295 RLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFF 350
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-402 |
1.58e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 163.78 E-value: 1.58e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 56 LGADRISAPLLTLSCWLTPLMILASQNHLATEpiSRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITR 135
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 136 WGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPAMMNSWSHSMWWLaLLTAFMIKMPLYGLHLW 215
Cdd:COG0651 150 GGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 216 LPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDP--LSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSH 293
Cdd:COG0651 228 LPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 294 MGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTI 373
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350
....*....|....*....|....*....|...
gi 953245174 374 NLMGELTIITSLFN----WSNITILMTGLGTLI 402
Cdd:COG0651 388 GFVSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-404 |
3.18e-45 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 164.49 E-value: 3.18e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 53 NYYLGADRISAPLLTLSCWLTPLMILASQnhlatEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVI 132
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPAMMNSwSHSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMvmALWGVI--MTGSIC-LRQTDLKSLIAYS 289
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWL--ATWAVVsvLYGASCaIAQKDMKKMVAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 290 SVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTR---NMQLLLPLMGLWWLLASLTN 366
Cdd:PRK06473 303 SIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRgllNPERGLPITGSLMILGVMAS 382
|
330 340 350
....*....|....*....|....*....|....*...
gi 953245174 367 MALPPTINLMGELTIITSLFNWSNITILMTGLGTLITA 404
Cdd:PRK06473 383 AGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTA 420
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-383 |
2.43e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 148.70 E-value: 2.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 53 NYYLGADRISAPLLTLSCWLTPLMILASQnhlatePISRK-RTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLV 131
Cdd:PRK02546 80 TWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 132 IITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPAMMNSWsHSMWWLALLTAFMIKMPLYG 211
Cdd:PRK02546 154 LLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVP 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 212 LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFM-VMALWGVIMTGSICLRQTDLKSLIAYSS 290
Cdd:PRK02546 232 LHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 291 VSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALP 370
Cdd:PRK02546 312 ISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
330
....*....|...
gi 953245174 371 PTINLMGELTIIT 383
Cdd:PRK02546 392 GMSGFVAELMVFV 404
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
56-403 |
4.61e-37 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 142.01 E-value: 4.61e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 56 LGADRISAPLLTLSCWLTPLMILASQnhlatePISRK-RTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIIT 134
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 135 RWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMqaqnGTLSTHMMQLNQPAMMNSwSHSM-----WWLALLTAFMIKMPL 209
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM----GLYGSNEPTLNFETLANQ-SYPValeilFYIGFLIAYAVKLPI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 210 YGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPF-MVMALWGVIMTGSICLRQTDLKSLIAY 288
Cdd:CHL00011 228 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 289 SSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMA 368
Cdd:CHL00011 308 SSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLA 387
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 953245174 369 LPPTINLMGELT----IITS---LFNWSNITILMTGLGTLIT 403
Cdd:CHL00011 388 LPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILT 429
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-329 |
1.44e-33 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 132.14 E-value: 1.44e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 53 NYYLGADRISAPLLTLSCWLTPLMILASqnhlaTEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVI 132
Cdd:PRK07363 72 SYSLGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 133 ITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNqPAMMNSWSHSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK07363 147 IAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAIS-TQNLSLNTQLILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPfmVMALWGVI--MTGS-ICLRQTDLKSLIAYS 289
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSAIAQKDIKRMVAYS 302
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 953245174 290 SVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCL 329
Cdd:PRK07363 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHL 342
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.69e-26 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 102.99 E-value: 1.69e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 1 MLKIIIPTILLLPTIMLCKPKQLWPTTLTHSFGIALLSLQWFKPSMELT-TFSNYYLGADRISAPLLTLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSwSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 953245174 80 SQNHLATEPISRKRTFITTITLLQISLIMA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-447 |
2.20e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 108.52 E-value: 2.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 58 ADRISAPLLTLSCWLTPLMILASQNHLATEpiSRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 138 NQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTL-----STHMMQLNQPAMMNSWSHSMWWLAL-----LTAFMIKM 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlSAKIRGLSFPLTGGLAGNPPLALGValalaLWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 208 PLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-------LDPLSKTLSYPFMVMALWGVIMTGSICLRQT 280
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 281 DLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWL 360
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 361 LASLTNMALPPTINLMGELTIITSLFNWSN-ITILMTGLGTLITATYTLYMLTTTQWGETPSHMKlippTHTREHLLMML 439
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFyLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEE----VEHKESPSMSV 473
|
....*...
gi 953245174 440 HILPMTLL 447
Cdd:PRK12667 474 VILVLALA 481
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-447 |
6.01e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 98.03 E-value: 6.01e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 56 LGADRISAPLLTLSCWLTPLMILASQnhlaTEPISRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITR 135
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 136 WGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPAMMnswshsmwwlALLTAF-------MIKMP 208
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENP----------TVVTAFgfvllalALKAA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 209 LYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTL----DPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKS 284
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 285 LIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLL----LTRNMqlllPLMGLWWL 360
Cdd:PRK08375 298 VLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSelsgLGRRM----PLTAAAFA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 361 LASLTNMALPPTINLMGELTIITSLF---NWSNITILMtgLGTLITATYTLYMLTTTQWGETPSHMkliPPTHTREHLLM 437
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVeagQWLVLAVLL--ASSLLALLYFLRIWYRAFFGPPPPGS---EAPKQEAPLGM 448
|
410
....*....|
gi 953245174 438 MLHILPMTLL 447
Cdd:PRK08375 449 LAPSLALALL 458
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-400 |
1.89e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 84.60 E-value: 1.89e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 199 LLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLD--PLSKTLSYPFMVMALWGVIMTGSIC 276
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 277 LRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMG 356
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 953245174 357 LWWLLASLTNMALPPTINLMGELTIITSLFN---WSNITILMTGLGT 400
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
56-386 |
1.14e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 82.47 E-value: 1.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 56 LGADRISAPLLTLSCWLTPLMILAS---QNHLATEpiSRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVI 132
Cdd:PRK08667 73 FHIDRLAAFFIILIGLVSLCVAIYSlgyNEHMSSN--ERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 133 ITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSThmmqlnQPAMMNSWSHSMWWLALLTAFMIKMPLYGL 212
Cdd:PRK08667 151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL------SPLGASAGILSLVFLLLFLGFGIKAGIIPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMtlDPLSKTLSYPF------MVMALWGVIMTgsicLRQTDLKSLI 286
Cdd:PRK08667 225 HKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLM--DVLSPELWWGVlillagSISALLGVIYA----LKEHDLKGLL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 287 AYSSVSHMGLVIAATLTQTQWSHTGSITLM-----------IAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLM 355
Cdd:PRK08667 299 AYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYT 378
|
330 340 350
....*....|....*....|....*....|.
gi 953245174 356 GLWWLLASLTNMALPPTINLMGELTIITSLF 386
Cdd:PRK08667 379 SALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-403 |
4.32e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 80.38 E-value: 4.32e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 90 SRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITrWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQA 169
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 170 QNGTLSTHMMQLNQPAMmnswshsmwwLALL-TAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITM 248
Cdd:PRK07234 170 ANGTFAFSGLATADPEA----------FALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCAL 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 249 TLDPLSKTLSYPFMVMALWGVImtgsICLRQTDLKSLIAYSSVSHMGLVIAATLtqtqwshTGSItLMIAHGLTSSMLFC 328
Cdd:PRK07234 240 DVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPL-------VGGL-YALAHGLVKSTLFL 307
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 953245174 329 LANTNYERTHSRVLLLTRNMQLLLPLmglwwLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTLIT 403
Cdd:PRK07234 308 CAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
104-394 |
1.09e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 78.81 E-value: 1.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 104 ISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSthmmqLNQ 183
Cdd:MTH00062 82 IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN-----FSD 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 184 PAMMNSWSHSMWWLaLLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSkTLSYPFMV 263
Cdd:MTH00062 157 WGSDDSVSLIVYYV-LSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS-FLGYLFLC 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 264 MALWGVIMTGSicLRQTDLKSLIAYSSVSHMgLVIAATLTQTQWSHTG-SITLMIAHGLTSSMLFCLANTNYERTHSRVL 342
Cdd:MTH00062 235 CLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNW 311
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 953245174 343 LLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITIL 394
Cdd:MTH00062 312 VLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLF 363
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
2.23e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.50 E-value: 2.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 110 FSATELIMFFIAFETTLIPTLVIITRwGNQMERLNAGTYFLFyTLIGSLPLLVALSSMQAQNGTLSTHMMQlnqPAMMNS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADIS---QGLIND 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 190 WSHSMWWLA--LLTAFMI-KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIrITMTLDPLSK----------- 255
Cdd:PRK08668 190 TSTGFALIVflFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKlfsefgtyrgv 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 953245174 256 -TLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLF 327
Cdd:PRK08668 269 pLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-327 |
3.84e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 77.32 E-value: 3.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 56 LGADRISAPLLTLSCWLT-PLMILASQNHLAT----EPISrkrTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTL 130
Cdd:PRK12665 72 LVVDRLSALMLVVSSVVLlAVLVYAIGQGIRDgdeeQPVS---IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 131 VIITRwGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSthMMQLN-QPAMMNSWSHSMWWLALLTAFMIKMPL 209
Cdd:PRK12665 149 VLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLN--MADLAvRLDELPSGTRTALFAVLLVAFGIKAAV 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 210 YGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPlSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYS 289
Cdd:PRK12665 226 FPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFT 304
|
250 260 270
....*....|....*....|....*....|....*...
gi 953245174 290 SVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLF 327
Cdd:PRK12665 305 LVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
95-385 |
4.23e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 71.61 E-value: 4.23e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 95 FITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTyfLFYTLIGSLPLLVALSSMQAQNGTL 174
Cdd:PRK12650 112 FYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 175 STHMMqLNQPammnSWSHSMWWLALlTAFMIKMPLYG------LHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITM 248
Cdd:PRK12650 190 SLSGI-LHSD----VWAEKPGLTTV-VAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 249 TLDPLSkTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFC 328
Cdd:PRK12650 264 VFHDVA-VWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFM 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 329 LANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSL 385
Cdd:PRK12650 343 LIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAF 399
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-398 |
6.55e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 70.57 E-value: 6.55e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 155 IGSLPLLVALSSMQAQNGTLSthMMQLNQPA-MMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAA 233
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLN--MAHIAQLAgTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 234 VLLKLGGYGIIRITMTLDPLSKTLSYPFMV--MALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTG 311
Cdd:PRK08377 247 FVVKAGLYAMARILYLMQNANGWSSVLKLViiMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 312 SITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPptinlmgeltiitsLFN--WS 389
Cdd:PRK08377 327 GVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIP--------------LFNvfWS 392
|
....*....
gi 953245174 390 NITILMTGL 398
Cdd:PRK08377 393 KFRIILAGL 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-327 |
1.19e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.78 E-value: 1.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 93 RTFITTITLLQISLIMAFSATELIMFFIAFE-TTLIPTLVIITRwgNQMERLNAGTYFLF-------YTLIGsLPLLVAL 164
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFiastamiFAFIG-LIFLFSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 165 SSMQAQNGTLSTHMMQLNQPAMmnswSHSMWWLA---LLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGY 241
Cdd:PRK08676 179 TRQALGTGTLNWTELAAHASLL----SPSVLGASflfIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIY 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 242 GIIRITMTL--DPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAH 319
Cdd:PRK08676 255 GILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAH 334
|
....*...
gi 953245174 320 GLTSSMLF 327
Cdd:PRK08676 335 SLVKSGLF 342
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
101-401 |
1.58e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 69.23 E-value: 1.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 101 LLQISLIMAF-SATELIMFFIAFETTLIPTLVIITRWGNQmERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLS-THM 178
Cdd:PRK06525 120 LLFIGAMAGLvYSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFAlSAL 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 179 MQLNQPAmmnswsHSMWWLALLTAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDPLSKTL 257
Cdd:PRK06525 199 SGLHGSL------KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 258 SYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHT---GSITLMIAHGLTSSMLFCLANTNY 334
Cdd:PRK06525 272 GYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLaleGSIAYIFNHAFAKSLFFLVAGALS 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 335 ERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTL 401
Cdd:PRK06525 352 YSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-371 |
4.58e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 64.73 E-value: 4.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 95 FITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTL 174
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 175 SthMMQLNQPAMMNSWSHSMWWLALL-TAFMIKMPLYGLHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGIIRITMTLDP 252
Cdd:PRK08376 203 N--MAYLAVKMSENPTVVAKIALALFiAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYG 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 253 LS---KTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVI------AATLTQTQWSHTGSITL------MI 317
Cdd:PRK08376 279 PAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYGEIALaggiyhIV 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 953245174 318 AHGLTSSMLFCLANTNYERTHSRVLL----LTRNMqlllPLMGLWWLLASLTNMALPP 371
Cdd:PRK08376 359 NHALYKALLFLTAGAVIYETGTRNLNelggLARTM----PKTTIAFLIGAAAIVGLPP 412
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-371 |
7.36e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 64.14 E-value: 7.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 117 MFFIAFET-TLIPTLVIITrwgNQMERLNAGTYFLFYTL--IGSLPLLVALSSMQAQNGTLSThmmqlnqpAMMNSWSHS 193
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIRRAGFLYLLMahAGALAILLAFGLLARESGSYDF--------AAMRAAHLS 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 194 MWW--LALLTAFM---IKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSkTLSYPFMVMALWG 268
Cdd:PRK06521 206 PFWasLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAP-GWWWGVLVLALGA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 269 VIMTGSI--CLRQTDLKSLIAYSSVSHMGLVI----------------AATLtqtqwSHTGSITLMIAHGLTSSMLFCLA 330
Cdd:PRK06521 285 ISAVLGVlyALAEHDLKRLLAYSTIENIGIIFvglglamvfiaygmplLAAL-----ALTAALYHLLNHALFKSLLFLGA 359
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 953245174 331 NTNYERTHSRVLL----LTRNMqlllPLMGLWWLLASLTNMALPP 371
Cdd:PRK06521 360 GAVLHATGTRDMEklggLIRRM----PWTAWAFLIGCLAISALPP 400
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-397 |
1.88e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.83 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 205 IKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT-----LDPLSKTLSYPFMVMALWGVIMTGSICLRQ 279
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 280 TDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANT---NYERTHSRVLLltrNMQLLLPLMG 356
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKIT 377
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 953245174 357 LWWLLASLTNMALPPTINLMGELTIITSLFN---WSNITILMTG 397
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGLVVLLVG 421
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-401 |
9.95e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 60.70 E-value: 9.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 115 LIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQlnqpAMMNSWSHSM 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELL----ASGDVIREHP 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 195 WWLALLTAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLdplSKTLSYPFMVMALWGV 269
Cdd:PRK12647 193 LYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVL---GGTPLWQTILPLFGGL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 270 IM--TGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRN 347
Cdd:PRK12647 269 TMltGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGG 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 953245174 348 MQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGLGTL 401
Cdd:PRK12647 349 LRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-401 |
1.48e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 59.96 E-value: 1.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 58 ADRISAPLLTLSCWLTPLMILASqnhLATEPISRKRT-FITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRW 136
Cdd:PRK07691 75 ADMFAALLVLTSSIITFLVILYS---FQTIGIERERYyYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 137 GNQMERLNAGTYFLFyTLIGSLPLLVALSSMQAQNGTL-----STHMMQLN--QPAMMNSWShsmwwLALLTAFMIKMPL 209
Cdd:PRK07691 152 GTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLnmadiSVKIAELSagQTGLITVVA-----ILFLFVFATKAGL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 210 YGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFM-VMALWGVIMtGSI-CLRQTDLKSLIA 287
Cdd:PRK07691 226 FPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIF-GVIgAVAYFDIKKIII 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 288 YSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLlltRNMQLLL---PLMGLWWLLASL 364
Cdd:PRK07691 305 YNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDL---KKMGGLIkryPVLGWMFFIAAL 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 953245174 365 TNMALPPTINLMGELTIITSLFN----WSNITILMTGLGTL 401
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
148-300 |
1.88e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 59.91 E-value: 1.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 148 YFLFYTLIGSLpLLVALSSMQAQNGTLS-THMMQLNQPAmmnswshsmWWLALLtAFMIKMPLYGLHLWLPKAHVEAPIA 226
Cdd:PRK12668 148 YLLVHVLGGVL-LLAGILLHYAETGSFAfGAIAGLGGTA---------AWLILI-GFGVNAAFPPLHAWLPDAYPEATVT 216
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 953245174 227 GSMILAAVLLKLGGYGIIRitmtLDPLSKTLSYPFMVMALWGVIMTgsicLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:PRK12668 217 GSVFLSAFTTKTAVYALAR----AFPGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQVGYMVAG 282
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-370 |
2.98e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.38 E-value: 2.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 95 FITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 175 S-THMMQLNQPAMMNSWSHSMWWLALLTAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDp 252
Cdd:PRK12646 192 NiTEILGQADHIKNHGLFIPMIFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 253 LSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLV-----IAATLTQTQWSHTGSITLMIA--------- 318
Cdd:PRK12646 269 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQQDAIASIYVFVLfaalfhlmn 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 953245174 319 HGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALP 370
Cdd:PRK12646 349 HAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
95-458 |
5.74e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.04 E-value: 5.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 95 FITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITrWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTL 174
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 175 STHMMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHlWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLS 254
Cdd:PRK12663 189 NMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQE 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 255 KTLSYPFMVMALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTN 333
Cdd:PRK12663 268 RELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 334 YERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFN----WSNITILMTGLGTLITatyTLY 409
Cdd:PRK12663 348 VRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDngayILLALMLITSLITMYS---LFR 424
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 953245174 410 MLTTTQWGETPSHMKLIPPTHTREHLLMMLHILPMTLLMTKPELIWGVS 458
Cdd:PRK12663 425 IFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAEPLLNLT 473
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-392 |
1.78e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 56.36 E-value: 1.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 34 IALLSLQWFKPSMELTTFSNYYLG--ADRISAPLLTLSCWLTPLMILASQNHLATEPI-SRKRTFITTITLLQISLIMAF 110
Cdd:PRK06589 55 IDLLFLKGIRAQFELMDFGNYSIGlhLEPLGLIFLLLIGFLWICALLYTPKYLAINNIdSSSRFLFFFNLTILIGVLIAL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 111 SaTELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSThmmqlnQPAMMNSW 190
Cdd:PRK06589 135 S-SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF------VSGGLFSK 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 191 SHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMTLDPLSKTLSYPFM-----VMA 265
Cdd:PRK06589 208 NQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEfnwliFIP 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 266 LWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLT 345
Cdd:PRK06589 288 IVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKL 367
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 953245174 346 RNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNIT 392
Cdd:PRK06589 368 HGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
77-403 |
1.96e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 56.72 E-value: 1.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 77 ILASQNHLATEPISRKRTFITTITLLQISLIMafSATELIMFFIAFETTLIPTLVIITRWGNQMErlnAGTYFLFYTLIG 156
Cdd:PRK06459 58 ILASLYSIEYDHYGKWLSSLYILTILGMAIVL--TSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 157 SLPLLVALSSMQAQNGTLSTHMMQLNQPAMMNSWshsmwwlalltAFMIKMPLYGLHL--WLPKAHVEAPIAGSMILAAV 234
Cdd:PRK06459 133 TVLILAGFAWAFIISGTTNFSYLPSPVPLILASF-----------GFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSAT 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 235 LLKLGGYGIIRITM-TLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAAT----LTQTQWSH 309
Cdd:PRK06459 202 MTLMGVYGILKMTIlTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymVTKQLITS 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 310 TGSITLM------IAHGLTSSMLFCLANTNYERTHSRVllltRNMQLLLPLMGLWWLLASLTnmALPPTINLMGELTIIT 383
Cdd:PRK06459 282 IEHFSLItvilysFAHSVAKTGLFLSSGLQEKQSITYS----KKIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLE 355
|
330 340
....*....|....*....|
gi 953245174 384 SLFNWSNITILMTGLGTLIT 403
Cdd:PRK06459 356 SLFMFAYVLHNVISILFIVT 375
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-323 |
3.66e-08 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 55.51 E-value: 3.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 2 LKIIIPTILLLPTIMLC---------KPKQLWPTTLTHSFGIALLSLQWFKPSMELTTFSNYYLgADRISAPLLTLSCWL 72
Cdd:COG1007 4 LLALLPEIILLLGALVLllldlflprRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFV-VDGFALFFKLLILLA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 73 TPLMILASQNHLATEPISRKRTFIttitLLQISL----IMAfSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGT- 147
Cdd:COG1007 83 ALLVLLLSRDYLERRGLLRGEFYA----LLLFATlgmmLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALk 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 148 YFLFYTLIGSLpLLVALSSMQAQNGTLSthMMQLNQPAMMNSWSHSMWWLAL---LTAFMIKMPLYGLHLWLPKAHVEAP 224
Cdd:COG1007 158 YFLLGALSSGF-LLYGISLLYGATGSLN--LAGIAAALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 225 IAGSMILAAVLlKLGGYGI-IRITMT-LDPLSKTLSYPFMVMALwgVIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:COG1007 235 TPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLG 311
|
330 340
....*....|....*....|...
gi 953245174 301 TLTQTQWSHTGSITLMIAHGLTS 323
Cdd:COG1007 312 LAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
4.95e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 55.22 E-value: 4.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 155 IGSLPLLVALSSMQAQNGTLSthMMQLNQPAMMNSWSHSMWWLALlTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLD--LRLLDMRMQQLPLGSDIWLLGV-IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 235 LLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLV---IAATLTQTQWSH-- 309
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllgLGAGVTGIALEQpa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 310 ------TGSITLMIAHGLTSSMLFCLANTNYERTHSRVLLLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIIT 383
Cdd:PRK08042 302 lialglVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
....*..
gi 953245174 384 SLFNWSN 390
Cdd:PRK08042 382 SFFKLSN 388
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-306 |
3.80e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 52.26 E-value: 3.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 95 FITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGtyfLFYTLIGSLP---LLVALSSMQAQN 171
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAG---LKYFILGAFSsglLLFGISLIYGFT 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 172 GTLS-THMMQLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITMT- 249
Cdd:TIGR01770 181 GSLNfEDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYi 260
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 250 LDPLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQ 306
Cdd:TIGR01770 261 LFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL 317
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
212-401 |
8.10e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 51.31 E-value: 8.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 212 LHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLDpLSKTLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSS 290
Cdd:COG1009 230 LHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 291 VSHMGLVIAATLTQtqwSHTGSITLMIAHGLTSSMLFCLANTNYERTHsrvlllTRNMQLL------LPLMGLWWLLASL 364
Cdd:COG1009 308 VSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATG------TRDIRKMgglrkkMPITAITFLIGAL 378
|
170 180 190
....*....|....*....|....*....|....*..
gi 953245174 365 TNMALPPTINLMGELTIITSLFNWSNITILMTGLGTL 401
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALL 415
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
106-323 |
4.50e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.05 E-value: 4.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 106 LIMAfSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGtyfLFYTLIGSLP---LLVALSSMQAQNGTLSTHMMQln 182
Cdd:PRK05777 117 MVMV-SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAA---IKYFVLGALAsgfLLYGMSLLYGATGSLSFAGIA-- 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 183 qpAMMNSWSHSMWWLALLTAFMI-----KMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLGGYGII-RITMT-LDPLSK 255
Cdd:PRK05777 191 --KALADGSGNSLLLLFGLVFLLvglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVaFGGLSE 267
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 953245174 256 TLSYPFMVMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTS 323
Cdd:PRK05777 268 DWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
212-327 |
5.40e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.15 E-value: 5.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 212 LHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITmtlDPLSKTLSYPFMVMALWGVIM--TGSICLRQTDLKSLIAY 288
Cdd:PRK12644 222 FHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA---PGFADVPVWRPTVLVLGLATMllGGWRALRQHDLKLILAY 297
|
90 100 110
....*....|....*....|....*....|....*....
gi 953245174 289 SSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLF 327
Cdd:PRK12644 298 GTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
108-294 |
5.57e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.06 E-value: 5.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 108 MAFSATElIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMqLNQPAMM 187
Cdd:PRK12649 127 MVFSGNT-IQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATI-LQDSELI 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 188 NSWSHSMWWLALLTAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITMTLdplSKTLSYPFM 262
Cdd:PRK12649 205 ENIKGHPLFLITLILIFIgaaaKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIF---SGTEAWFIL 280
|
170 180 190
....*....|....*....|....*....|....
gi 953245174 263 V--MALWGVIMTGSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK12649 281 VsgTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-300 |
6.16e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.53 E-value: 6.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 95 FITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTL 174
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 175 STHMMqLNQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRITmtldPL 253
Cdd:MTH00020 193 DFSSV-FNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSS----PL 266
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 953245174 254 SKTLSYPFMVMALWG---VIMTGSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:MTH00020 267 FEQAPLALIIVTIVGsltVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVA 316
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-330 |
1.29e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.65 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 59 DRISAPLLTLSCWLTPLMILASQNHLATEPisRKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGN 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP--HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 139 QMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQ---LNQPAMMNSWSHSMWWLALLTAFMI---------- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 206 -KMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGIIRITmtldPLSKTLSYPFMVMALWGVI---MTGSICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 953245174 282 LKSLIAYSSVSHMGLVIaaTLTQTQWSHTGSITLMIAHGLTSSMLFCLA 330
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSA 359
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-402 |
5.90e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 45.23 E-value: 5.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 199 LLTAFMIKMPLYGLHLWLPKAHVEA--PIAGsmiLAAVLLKLGGYGIIRITMTLDPLSKTLSYPFMVMALWGV----IMT 272
Cdd:PRK12666 216 LLVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 273 GSI-CLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFCLANTnYERTHSR---VLLLTRNM 348
Cdd:PRK12666 293 GAIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADL-VERQRGAaadRLAVTPEL 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 349 QLLLP---------------LMGLWWLLASLTNMALPPTINLMGELTIITSLFN--------WSNITILMTGLGTLI 402
Cdd:PRK12666 372 YDLDEeeeeevgvaipatmaLLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
100-396 |
1.13e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.00 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 100 TLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLvalssmqAQNGTLSTHMM 179
Cdd:MTH00011 13 STMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLL-------GMTMMWSFPSL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 180 QLNQPAMMnswshsmwwlaLLTAFMIKMPLYGLHLWLPkaHVEAPIagSMILAAVLLKLGGYGIIRITMTLDPLSKTLSY 259
Cdd:MTH00011 86 LKNITALM-----------LLVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMM 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 260 PFMVMAlwGVIMTGSICLRQTDLKSLIAYSSVSHMGLViaaTLTQTQWSHTGSITLMIAHGLTSSMLFCLANTNYERTHS 339
Cdd:MTH00011 151 TSMAAM--SALAGGLGGMNQTQLRPLLAYSSIGHMGWM---TMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKF 225
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 340 RVLLLTRNmqlllPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMT 396
Cdd:MTH00011 226 NSKISSMS-----QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLV 277
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
185-402 |
1.23e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.11 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 185 AMMNSWSHSMWWLA--LLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLggygIIRITMTLDPLSKTLSYPFM 262
Cdd:MTH00144 74 SLIMYNLSFSWFSMslLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KV----APLFLLSNFLDLYWLAYLLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 263 VMALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAATLTQtqwSHTGSITLMIAHGLTSSMLFCLANTNYerthsrVL 342
Cdd:MTH00144 149 VISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHG---SWLMWMYFLIYIVSSGFLFFSLWSGDS------GS 219
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 953245174 343 LLTRNMQLLLPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWS-NITILMTGLGTLI 402
Cdd:MTH00144 220 MKDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSpLLLILLLLLGSLI 280
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
196-300 |
1.32e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 44.24 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 196 WLALLTAF------MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGIIRitmtLDPLSKTLSYPFMVMALWG 268
Cdd:PRK07376 224 WLALLLCIlvflgpMAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVAR----MYPVFEQFPAVMTVIAWTG 298
|
90 100 110
....*....|....*....|....*....|....*
gi 953245174 269 VI---MTGSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:PRK07376 299 AItafLGASIALTQNDIKKGLAYSTISQLGYMVMA 333
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
104-398 |
3.64e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.71 E-value: 3.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 104 ISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAG-TYFLFYTLIGSLPLL-VALSSMQAQNGTLSTHMMQL 181
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 182 NQPAMMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAVLlKLGGYGIIritmtldpLSKTLSYPF 261
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVP-KLGIFSIL--------VSIGLNVNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 262 MVMALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVIAATLTQTQWSHTGSITLMIAHGLTSSMLFclantnyerthSR 340
Cdd:MTH00196 155 LLIGGLFSLFVGAIgALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF-----------SI 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 953245174 341 VLLLTRNMQLL---------LPLMGLWWLLASLTNMALPPTINLMGELTIITSLFNWSNITILMTGL 398
Cdd:MTH00196 224 ILALNVYKNLIiefsglsrrLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAV 290
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
115-299 |
5.05e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 42.60 E-value: 5.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 115 LIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQNGTLSTHMMQLNQPAMMNswsHSM 194
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQN---SPL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 195 WWLA----LLTAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGIIRITmtldPLsktlsypFMVMALWGV 269
Cdd:PRK12645 209 FIPAmiliLLGAFT-KSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PI-------FAGSQVWFW 275
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 953245174 270 IMT---------GSI-CLRQTDLKSLIAYSSVSHMGLVIA 299
Cdd:PRK12645 276 TVTlvglitlfwGSLnAVKQTDLKGILAFSTVSQLGLIMS 315
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
91-300 |
8.90e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 41.88 E-value: 8.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 91 RKRTFITTITLLQISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTLIGSLPLLVALSSMQAQ 170
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 171 NGTLS-THMMQLNQPammNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggyg 242
Cdd:MTH00208 216 FNSWNlNEILSLNNS---NSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------ 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 953245174 243 IIRITMTLDPLSKTLSYPFMVMALwGVIMTGSICLRQTDLKSLIAYSSVSHMGLVIAA 300
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSL-TALFAASTAISQHDIKKIIAYSTTSQLGLMVVA 342
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
104-295 |
2.98e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 39.66 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 104 ISLIMAFSATELIMFFIAFETTLIPTLVIITRWGNQMERLNAGTYFLFYTlIGSLPLLVALSSMQaqngtlsthmmqlnq 183
Cdd:MTH00197 9 GGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQE-FGSALLLMGGSLSF--------------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 184 pamMNSWSHSMWWLALLTAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAaVLLKLGGYGIIritMTLDPLSKTLSYPFMV 263
Cdd:MTH00197 73 ---SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLIL---AFNSSSFMGLLICSVL 145
|
170 180 190
....*....|....*....|....*....|..
gi 953245174 264 MALWGVIMTgsicLRQTDLKSLIAYSSVSHMG 295
Cdd:MTH00197 146 SSLIGGIGG----MNQSNIRQLLAYSSIGHTG 173
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
197-327 |
9.36e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 38.35 E-value: 9.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 953245174 197 LALLTAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAAVLLKLGGYGIIRItMTLDPLSKTLSYPFMVMALWGVIMTGSIC 276
Cdd:PRK07390 225 LALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKL-QPVLALSPVALTVLIVIGTVTAIGASLVA 302
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 953245174 277 LRQTDLKSLIAYSSVSHMGLV-IAATLTQTQWshtgSITLMIAHGLTSSMLF 327
Cdd:PRK07390 303 IAQIDIKRALSYSTSAYLGLVfIAVGLQQPDI----ALLLLLTHAIAKALLF 350
|
|
| |
