|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-462 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 674.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 1 MLKIILPTLMLLPTTLLSPPKLVWTNTTMHSLLVATLSLQWLAPSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 81 QGHLQHEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 161 LVAILYLHAQMGTLHFPTLKLYPyipqPTSTKHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTH----PTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 241 KLGGYGIMRITCLTSPLTNSLlHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMIL 320
Cdd:MTH00124 237 KLGGYGIIRITLLLPPLSNTL-HYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 321 MVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIIL 400
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002160260 401 TGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTREHLLMTLHLLPMLLLILKPELISGP 462
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 542.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 1 MLKIILPTLMLLPTTLLSPPKLVWTNTTMHSLLVATLSLQWLAPSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 81 QGHLQHEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 161 LVAILYLHAQMGTLHFPTLKLYPyipqPTSTKHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMS----PMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 241 KLGGYGIMRITCLTSPLTNSLLhYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMIL 320
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELS-YPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 321 MVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIIL 400
Cdd:MTH00068 316 MISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILI 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002160260 401 TGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTREHLLMTLHLLPMLLLILKPELISG 461
Cdd:MTH00068 396 TGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-463 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 541.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 1 MLKIILPTLMLLPTTLLSPPKLVWTNTTMHSLLVATLSLQWLAPSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 81 QGHLQHEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 161 LVAILYLHAQMGTLHFPTLKLYPYiPQPTStkhWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQ-PLPNS---WSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 241 KLGGYGIMRITCLTSPLTNSLLhYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMIL 320
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMA-YPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 321 MVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIIL 400
Cdd:MTH00110 316 MIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002160260 401 TGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTREHLLMTLHLLPMLLLILKPELISGPL 463
Cdd:MTH00110 396 MGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
3.94e-154 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 445.55 E-value: 3.94e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 1 MLKIILPTLMLLPTTLLSPPKLVWTNTTMHSLLVATLSLQWLA-PSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 80 SQGHLQHEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 160 LLVAILYLHAQMGTLHFPTLKLYpyipQPTSTKHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYS----QPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 240 LKLGGYGIMRITCLTSPLTNSLLhYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMI 319
Cdd:MTH00127 237 LKLGGYGMMRMMVMLDPLTKELS-YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 320 LMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTII 399
Cdd:MTH00127 316 LMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002160260 400 LTGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTREHLLMTLHLLPMLLLILKPELISG 461
Cdd:MTH00127 396 LTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-459 |
8.40e-146 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 423.97 E-value: 8.40e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 3 KIILPTLMLLPTTLLSPPKLVWTNTTMHSLLVATLSLQWLAPSY-YPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSeVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 82 GHLQHEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 162 VAILYLHAQMGTLHFPTLKLYPYIPqptstkhWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTT-------WNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 242 LGGYGIMRITCLTSPLTNSLLhYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILM 321
Cdd:MTH00206 234 LGGYGMMRIILILGPSTKLSS-YFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 322 VSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILT 401
Cdd:MTH00206 313 IAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1002160260 402 GTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTREHLLMTLHLLPMLLLILKPELI 459
Cdd:MTH00206 393 GLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
4.54e-132 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 389.34 E-value: 4.54e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 1 MLKIILPTLMLLPTTLLSPPKLVWTNTTMHSLLVATLSLQWLAPSYY-PYKNLTLCMGIDQTSSPLLVLSCWLTPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 80 SQGHLQHEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 160 LLVAILYLHAQMGTLHFPTLKLYPYIPQPTSTkhwSPLLLNIALLmAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNS---SSIWWIFCIL-AFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 240 LKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMI 319
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 320 LMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTII 399
Cdd:MTH00044 317 LMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFP 396
|
410 420 430
....*....|....*....|....*....|....*....
gi 1002160260 400 LTGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTRE 438
Cdd:MTH00044 397 IIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
29-438 |
2.92e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 340.59 E-value: 2.92e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 29 MHSLLVATLSLQWLAPSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILASQGHLQHEPPTRKQIFTMTLVMVqpLIIL 108
Cdd:MTH00163 25 QSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNLFLFLILFLLI--FLLL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 109 AFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYPYIPqp 188
Cdd:MTH00163 103 TFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLN-- 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 189 tstkhwspLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLtNSLLHYPFIV 268
Cdd:MTH00163 181 --------FLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKL-GLKFNYIWIS 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 269 LALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILL 348
Cdd:MTH00163 252 ISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 349 LTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTLSPHI 428
Cdd:MTH00163 332 INKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGKYYSGL 411
|
410
....*....|
gi 1002160260 429 TTLQSSTTRE 438
Cdd:MTH00163 412 YSCSSGKVRE 421
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-438 |
1.89e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 317.17 E-value: 1.89e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 37 LSLQWLAPSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILASQGHLQHEppTRKQIFTMTLVMVQPLIILAFSTTELM 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLR--NKSSSFSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 117 MFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYPYIPQPTStkhwsp 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG------ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 197 lLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSpLTNSLLHYPFIVLALWGALM 276
Cdd:MTH00150 153 -LWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFS-LSSSSFSIFLISLSLWGGVL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 277 TSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPL 356
Cdd:MTH00150 231 TSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLML 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 357 LPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTT 436
Cdd:MTH00150 311 YPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKS 390
|
..
gi 1002160260 437 RE 438
Cdd:MTH00150 391 SE 392
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
59-430 |
2.34e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 315.38 E-value: 2.34e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 59 DQTSSPLLVLSCWLTPLMILASQGHLqhEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGS 138
Cdd:MTH00205 56 DSLSLPLIMLSFWISLLMVLASYKVF--KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 139 QPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFptlklYPYIPQPTSTKHWSplLLNIALLMAFMVKAPLYGLHL 218
Cdd:MTH00205 134 QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSM-----FFNFPLNFSDFYLF--LYWIFLMLAFLVKLPMYFVHL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSpLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSH 298
Cdd:MTH00205 207 WLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLY-KLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGH 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 299 MGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTT 378
Cdd:MTH00205 286 MGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSL 365
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1002160260 379 NLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTLSPHITT 430
Cdd:MTH00205 366 NLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISS 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-460 |
2.28e-99 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 305.13 E-value: 2.28e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 1 MLKIILPTLMLLPTTLLSPpKLVWTNTTMHSLLVATLSLQWLAPSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 81 QGHLQHEppTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 161 LVAILYLHAQMGTLHFPTLKLYPYIPQPTStkhwsplLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLMN-------LWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 241 KLGGYGIMRITCLTsPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMIL 320
Cdd:MTH00014 231 KLGGYGLLRMSSLF-MHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 321 MVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIIL 400
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 401 TGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTREHLLMTLHLLPMLLLILKPELIS 460
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
51-438 |
1.07e-76 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 247.69 E-value: 1.07e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 51 NLTLCMGIDQTSSPLLVLSCWLTPLMILASQGHLQHEPPTrkqiFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTL 130
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRPKL----YYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 131 ILITRWGSqPERLSAGIYLLFYTLISSLPLLVAILYL--HAQMGTLHFPTLKLYPYipqPTSTKHWspllLNIALLMAFM 208
Cdd:COG1008 149 FLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALyfLAGALTFDIAELAAAPL---PLTAQLL----LFLAFFIAFA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 209 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLK 288
Cdd:COG1008 221 VKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLK 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 289 SLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLAN 368
Cdd:COG1008 301 RLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAA 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 369 LTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTRE 438
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-405 |
1.19e-74 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 236.06 E-value: 1.19e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 113 TELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYpyipQPTSTK 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKA----LTGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 193 HWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLlHYPFIVLALW 272
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFI-QQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 273 GALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLA-NTNYERTHSRILLLTQ 351
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYG 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1002160260 352 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTAT 405
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-415 |
2.92e-68 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 225.85 E-value: 2.92e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 56 MGIDQTSSPLLVLSCWLTPLMILASQGHLQheppTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:PRK05846 78 LGVDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 136 WGSqPERLSAGIYLLFYTLISSLPLLVAILYL----HAQMGTLHFPTLKLYPYipqPTSTKHWspllLNIALLMAFMVKA 211
Cdd:PRK05846 154 WGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPL---PPGVQYW----LFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLI 291
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 292 AYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTN 371
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1002160260 372 MALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSM 415
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-427 |
2.67e-66 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 220.20 E-value: 2.67e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 51 NLTLCMGIDQTSSPLLVLSCWLTPLMILASQGHLQHEPptrKQIFTMTLVMvQPLIILAFSTTELMMFYISFEATLIPTL 130
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASWESIQKRV---KEFYALLLLL-EAGVIGVFLALDLFLFYVFWEAMLIPMY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 131 ILITRWGSqPERLSAGIYLLFYTLISSLPLLVAILYLhaqmGTLHFPTLKLYPYIPQPTSTkhWSPLLLNIALLMAFMVK 210
Cdd:TIGR01972 144 LLIGVWGG-PNRIYAAMKFFLYTLAGSLLMLLAILGL----YFLGGGTFDLLELLNLPLPF--GVQTWLFLAFFIAFAVK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 211 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSL 290
Cdd:TIGR01972 217 VPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 291 IAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLT 370
Cdd:TIGR01972 297 IAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1002160260 371 NMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTLSPH 427
Cdd:TIGR01972 377 SLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNP 433
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
22-428 |
3.19e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 207.22 E-value: 3.19e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 22 LVWTNTTMHSLLVATLSLQWLAPSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILASQGHLQHepptRKQIFTMTLVM 101
Cdd:MTH00204 45 VLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLF 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 102 VQPLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKL 181
Cdd:MTH00204 121 LEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLN 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 182 ypyIPQPTSTKHWspllLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTnSL 261
Cdd:MTH00204 201 ---IKLPLSIQKW----LLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAA-SE 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 262 LHYPFIVL-----ALWGALMTSsiclRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLAN 336
Cdd:MTH00204 273 YFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVT 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 337 TNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSML 416
Cdd:MTH00204 349 FLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
410
....*....|..
gi 1002160260 417 TTTQHGTLSPHI 428
Cdd:MTH00204 429 NRISFGGGSNYL 440
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-438 |
5.46e-58 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 198.99 E-value: 5.46e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 54 LCMGIDQTSSPLLVLSCWLTPLMILASQGHLQHEPPTrkqiFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILI 133
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 134 TRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYPYIPqPTSTKHWspLLLNIALLMAfmVKAPL 213
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVV-SEQTQKW--IFLGIFLAMA--VKIPI 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 214 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAY 293
Cdd:MTH00226 247 FPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAY 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 294 SSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMA 373
Cdd:MTH00226 327 SSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVA 406
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002160260 374 LPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTLSPHITTLQSSTTRE 438
Cdd:MTH00226 407 VPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-415 |
3.93e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 180.25 E-value: 3.93e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 57 GIDQTSSPLLVLSCWLTPLMILASQGHLQHepptRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 137 GSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYPYipqptsTKHWSPLLLnIALLMAFMVKAPLYGL 216
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKI------EKELQYFIF-LGFFLSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRitcLTSPLTNSLLHY--PFI-VLALWGALMTSSICLRQIDLKSLIAY 293
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIR---FSWPLLPEASEYfsPLIqTLSLLAIIYGSLTTCRQVDLKRIIAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 294 SSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMA 373
Cdd:MTH00217 303 SSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANAS 382
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1002160260 374 LPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSM 415
Cdd:MTH00217 383 IPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-417 |
2.61e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 162.77 E-value: 2.61e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 94 IFTMTLVMvqpLIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYlhaqmgT 173
Cdd:MTH00094 66 ILSNLLIL---ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------N 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 174 LHFPTLKLYPYIpqptstKHWsplLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL 253
Cdd:MTH00094 137 FFFFSLCYFDFF------LSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 254 TSPLTNSLlhypFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFC 333
Cdd:MTH00094 208 LNFVYNNF----WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFY 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 334 LANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTL 413
Cdd:MTH00094 284 LIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
....
gi 1002160260 414 SMLT 417
Cdd:MTH00094 364 FLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-432 |
1.41e-41 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 154.80 E-value: 1.41e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 56 MGIDQTSSPLLVLSCWLTPLMILASQgHLQHEPptrKQIFTMTLVMVQPLIiLAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASW-KVTRKP---RLFYFLMLVLYSAQI-GVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 136 WGSQpERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFP----TLKLYPYipqptstkhWSPLLLNIALLMAFMVKA 211
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDlaelGAKSYPL---------ALELLLYAGFLIAFGVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLA----LWGALMTssicLRQIDL 287
Cdd:PRK12561 200 PIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGvvniIYGALNA----FAQDNV 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 288 KSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLA 367
Cdd:PRK12561 276 KRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTAS 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1002160260 368 NLTNMALPPTTNLMAELSIMITLFN---WSPP----TIILTGTATLLTASYTLSMLTTTQHGTLSPHITTLQ 432
Cdd:PRK12561 356 SMASLALPGMSGFVSELTVFLGITSsdvYSSTfrtiTILLAAVGLILTPIYLLSMLRRVFYGPRSELLPALA 427
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-407 |
1.47e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.90 E-value: 1.47e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 58 IDQTSSPLLVLSCWLTPLMILASQGHLQHEPPTRK-----QIFTMTLvmvqpliILAFSTTELMMFYISFEATLIPTLIL 132
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRfyplfLLLLAGM-------NGAFLTGDLFNLFVFFEVMLLASYGL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 133 ITrWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYpyipqptsTKHWSPLLLNIALLM---AFMV 209
Cdd:COG0651 147 VA-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR--------LAELDPGLLLAAFALllvGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 210 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLK 288
Cdd:COG0651 218 KAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 289 SLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLAN 368
Cdd:COG0651 298 RLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGA 377
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1002160260 369 LTNMALPPTTNLMAELSIMITLFN----WSPPTIILTGTATLL 407
Cdd:COG0651 378 LALAGLPPLSGFVSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-416 |
5.51e-37 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 142.15 E-value: 5.51e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 45 SYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILASQghlqhePPTRK-QIFTMTLVMVQPLIILAFSTTELMMFYISFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 124 ATLIPTLILITRWGSQpERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLypyipqptSTKHWSP---LLLN 200
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAL--------AAKDFGLgfqLLCY 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 201 IALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSI 280
Cdd:PRK02546 217 AGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALT 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 281 CLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLM 360
Cdd:PRK02546 297 SFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKM 376
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1002160260 361 ATWWLLANLTNMALPPTTNLMAELSIMI---TLFNWSPP----TIILTGTATLLTASYTLSML 416
Cdd:PRK02546 377 FAMWTACSLASLALPGMSGFVAELMVFVgfaTSDAYTLPfrvvVVFLAAVGVILTPIYLLSML 439
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
56-431 |
1.65e-35 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 137.91 E-value: 1.65e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 56 MGIDQTSSPLLVLSCWLTPLMILASQGHLQhepptRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:PRK06473 75 LGVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 136 WGSQpERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTlhfPTLKLYPYIPQ--PTSTKhwspLLLNIALLMAFMVKAPL 213
Cdd:PRK06473 150 WGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGA---SSFDYEPLRSHtlPLSTQ----LLLLAPILVGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 214 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAY 293
Cdd:PRK06473 222 VPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 294 SSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGL---QPLLPLMATWWLLANLT 370
Cdd:PRK06473 302 SSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMA 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002160260 371 NMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTLSPHITTL 431
Cdd:PRK06473 382 SAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
56-416 |
2.43e-33 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 131.61 E-value: 2.43e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 56 MGIDQTSSPLLVLSCWLTPLMILASQghlqhePPTR--KQIFTMTLVMVQPLIILaFSTTELMMFYISFEATLIPTLILI 133
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRnsRLFYFLMLAMYSGQIGL-FSSRDLLLFFIMWELELIPVYLLL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 134 TRWGSQpERLSAGIYLLFYTLISSLPLLVAILylhaQMG-------TLHFPTL--KLYPYIPQptstkhwspLLLNIALL 204
Cdd:CHL00011 153 SMWGGK-KRLYSATKFILYTAGGSIFLLIGVL----GMGlygsnepTLNFETLanQSYPVALE---------ILFYIGFL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 205 MAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQ 284
Cdd:CHL00011 219 IAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 285 IDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWW 364
Cdd:CHL00011 299 RNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMF 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1002160260 365 LLANLTNMALPPTTNLMAELSI---MITLFNWSP-PTIILT---GTATLLTASYTLSML 416
Cdd:CHL00011 379 SSFSMASLALPGMSGFVAELIVffgIITSQKYLLmPKILITfvmAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
52-424 |
1.81e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 120.59 E-value: 1.81e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 52 LTLCMGIDQTSSPLLVLSCWLTPLMILASQghlqhEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLI 131
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 132 LITRWGSQpERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFptlKLYPYIPQPTSTKhwSPLLLNIALLMAFMVKA 211
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF---DYDAISTQNLSLN--TQLILLTGLLLGFGIKI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHypfIVLALWGA---LMTSSICLRQIDLK 288
Cdd:PRK07363 220 PLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVA---PGLAIIGTisvIYGALSAIAQKDIK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 289 SLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGL-QPL--LPLMATWWL 365
Cdd:PRK07363 297 RMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLV 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1002160260 366 LANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSMLTTTQHGTL 424
Cdd:PRK07363 377 LAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-376 |
4.59e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 95.81 E-value: 4.59e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 58 IDQTSSPLLVLSCWLTPLMILASQGHLQHEppTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 138 SQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKL---YPYIPQPTSTKHWSPLLLNIALLM---AFMVKA 211
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirGLSFPLTGGLAGNPPLALGVALALalwAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-------TCLTSPLTNSLLhYPFIVLALWGALMTSSICLRQ 284
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALS-PILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 285 IDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWW 364
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAF 396
|
330
....*....|..
gi 1002160260 365 LLANLTNMALPP 376
Cdd:PRK12667 397 LIGALSLVGIPP 408
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-411 |
7.60e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 91.86 E-value: 7.60e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 58 IDQTSSPLLVLSCWLTPLMILASQGhlQHEPPTRKqIFTMTLVMVQPLIiLAFSTTELMMFYISFEATLIPTLILITRwG 137
Cdd:PRK08375 75 ADSLSALFLLVTSILAIAALLYAIG--YGEHRQTR-FYALFLLLLAGLL-GALLTADLFNLFVFLEIMSLSSYALVAM-G 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 138 SQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLklypyipqptSTKHWSPLLLNIAL---LMAFMVKAPLY 214
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL----------AGALAENPTVVTAFgfvLLALALKAAVF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 215 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCL---TSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLI 291
Cdd:PRK08375 220 PLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 292 AYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTN 371
Cdd:PRK08375 300 AYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSL 379
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1002160260 372 MALPPTTNLMAELSIMITLFN-WSPPTIILTGTATLLTASY 411
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
5.19e-19 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 82.19 E-value: 5.19e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 1 MLKIILPTLMLLPTTLLSPPKLVWTNTTMHSLLVATLSLQWL-APSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLnNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1002160260 80 SQGHLQHEPPTRKQIFTMTLVMVQPLIILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
36-387 |
8.37e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.55 E-value: 8.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 36 TLSLQ---WLAPsyypyknLTLCMGIDQTSSPLLVLSC--WLTPLMILASQGHLQHEPPTRKQIFTMTLVMVQPLIILAF 110
Cdd:PRK12665 56 TQAVQlggWDAP-------IGITLVVDRLSALMLVVSSvvLLAVLVYAIGQGIRDGDEEQPVSIFLPTYLILVAGVSNAF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 111 STTELMMFYISFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKL-YPYIPQPT 189
Cdd:PRK12665 129 LAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVrLDELPSGT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 190 STkhwsplLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRitcltsplTNSLL--HYPFI 267
Cdd:PRK12665 208 RT------ALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIR--------THTLLfpGGGLD 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 268 VLALWGALMTSSI----CLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTH 343
Cdd:PRK12665 274 TLLMVVALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAG 353
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1002160260 344 SRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIM 387
Cdd:PRK12665 354 SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-411 |
3.46e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 74.22 E-value: 3.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 95 FTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTL 174
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTF 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 175 HFPTLKLYPyipqPTStkhwsplllnIALL-MAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItcl 253
Cdd:PRK07234 175 AFSGLATAD----PEA----------FALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC--- 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 254 tspltnSLLHY-PFIVLALWG---ALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIqthwsfsgAMILMVSHGLTSS 329
Cdd:PRK07234 238 ------ALDVPgLDLIVRIFGvgtALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 330 MLFCLANTNYERTHSRILLLTQGLQPLLPLmatwwLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILtgtATLLTA 409
Cdd:PRK07234 304 TLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNL---AAVGTA 375
|
..
gi 1002160260 410 SY 411
Cdd:PRK07234 376 AS 377
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
107-349 |
3.59e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 74.19 E-value: 3.59e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 107 ILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFptlklypyip 186
Cdd:MTH00062 85 ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF---------- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 187 qptstKHWSP-----LLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSL 261
Cdd:MTH00062 155 -----SDWGSddsvsLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLG 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 262 LHYPFIVLALwGALMTSSiclRQIDLKSLIAYSSVSHMglVVAACMIQTHWSFSGAMILMVS--HGLTSSMLFCLANTNY 339
Cdd:MTH00062 230 YLFLCCLFSV-FFLITAC---SELDGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFY 303
|
250
....*....|
gi 1002160260 340 ERTHSRILLL 349
Cdd:MTH00062 304 EVSGSRNWVL 313
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
44-391 |
4.96e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.38 E-value: 4.96e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 44 PSYYPYKNLTLCMGIDQTSSPLLVLSCWLTPLMILASQGHLQH-EPPTRKQI---FTMTLVMVQPLIILAFSTTELMMFY 119
Cdd:PRK08667 61 PLWGIAPGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHmSSNERANLlsaLTALFILSMLGVVASANTFSFLFFW 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 120 isfEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKlYPYIPQPtstkhwsplLL 199
Cdd:PRK08667 141 ---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG-ASAGILS---------LV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 200 NIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItcLTSPLTNSLLHYPFIVLA-LWGALMTS 278
Cdd:PRK08667 208 FLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAgSISALLGV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 279 SICLRQIDLKSLIAYSSVSHMGLV-----------VAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRIL 347
Cdd:PRK08667 286 IYALKEHDLKGLLAYSSIENIGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNI 365
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1002160260 348 LLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLF 391
Cdd:PRK08667 366 EKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
196-400 |
9.13e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.04 E-value: 9.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 196 PLLLNIA---LLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTS-PLTNSLLHYPFIVLAL 271
Cdd:PRK06458 210 PTLMKLAfvfLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRLLLIFGL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 272 WGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQ 351
Cdd:PRK06458 290 LSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIR 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1002160260 352 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSP--PTIIL 400
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPllIAILL 420
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-415 |
3.80e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 71.39 E-value: 3.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 49 YKNLTLCMGIDQTSSPLLVLSCWLTPLMILASQGHLQHEPPTRKQIFTMTLVMVQPLIILAFSTTELMMFYISFEATLIP 128
Cdd:PRK06589 72 FGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 129 TLILITrWGSQPERLSAGIYLLFYTLISSLPL-LVAILYLHAQMGTLHFPTLKLYPYipqptstkhwSPLLLNIALLMAF 207
Cdd:PRK06589 152 TAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSK----------NQSIILLLMFIYG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 208 MVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYP----FIVLALWGALMTSSICLR 283
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAefnwLIFIPIVSIFYSSLKALK 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 284 QIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATW 363
Cdd:PRK06589 301 TDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFI 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1002160260 364 WLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATLLTASYTLSM 415
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSAL 432
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
95-332 |
2.12e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 69.25 E-value: 2.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 95 FTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRwGSQPERLSAGIYLLFyTLISSLPLLVAILYLHAQMGTL 174
Cdd:PRK08668 100 FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTF 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 175 HFPTLKLYPYIPQPTSTKhwspLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG------IM 248
Cdd:PRK08668 178 DFADISQGLINDTSTGFA----LIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfllvlyVL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 249 RITCLTSPLTN----SLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSH 324
Cdd:PRK08668 254 PGTKLFSEFGTyrgvPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNH 333
|
....*...
gi 1002160260 325 GLTSSMLF 332
Cdd:PRK08668 334 ALFKGLFF 341
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
97-419 |
7.23e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 67.76 E-value: 7.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 97 MTLVMVQplIILAFSTTELMMFYISFEATLIPTLILITRWGSQPErlSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHF 176
Cdd:PRK12650 116 MTAFMAA--MLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 177 PTlklypyIPQPTSTKHWSPLLLNIALLMAFMV--KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLT 254
Cdd:PRK12650 192 SG------ILHSDVWAEKPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 255 SplTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCL 334
Cdd:PRK12650 266 H--DVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFML 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 335 ANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSiMITLFNWSPptIILTGTATLLTASYTLS 414
Cdd:PRK12650 344 IGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEG-MLTAFLEAP--GGNAGVVLLLVGAALGA 420
|
....*
gi 1002160260 415 MLTTT 419
Cdd:PRK12650 421 VFTFA 425
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-422 |
2.41e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 65.94 E-value: 2.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 115 LMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYPyipqPTSTKHW 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAA----PTILSSP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 195 SPLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPI-------------AGSmllaalllklggYGIMRITCL--TSPLTN 259
Cdd:COG1009 209 LLTLILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhaatmvkAGV------------YLLARLSPLfaLSPVWL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 260 SLLhypfIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQthwSFSGAMILMVSHGLTSSMLFCLANTNY 339
Cdd:COG1009 276 TVV----AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVI 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 340 ERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATL---LTASYTLSML 416
Cdd:COG1009 349 HATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLF 428
|
....*.
gi 1002160260 417 TTTQHG 422
Cdd:COG1009 429 FLVFFG 434
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
98-412 |
3.76e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.12 E-value: 3.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 98 TLVMVQPLIILAFSTT-ELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHF 176
Cdd:PRK08376 125 TLILLLELGMLGMAITgDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNM 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 177 PTLKlYPYIPQPTSTKHWSPLLLNIALLMafmvKAPLYGLHLWLPKAHVEAPiaGSMLLAALLLKLGG-YGIMRI--TCL 253
Cdd:PRK08376 205 AYLA-VKMSENPTVVAKIALALFIAGLAM----KSGAVPVHMWLPDAYPAAP--SSISAMLLVIKQAGlYALARVlfSIY 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 254 TSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMG---------LVVAACMIQTHWSF---SGAMILM 321
Cdd:PRK08376 278 GPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHI 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 322 VSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPP-TIIL 400
Cdd:PRK08376 358 VNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPIlGVIA 437
|
330
....*....|..
gi 1002160260 401 TGTATLLTASYT 412
Cdd:PRK08376 438 MIGSVLTLASFV 449
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-376 |
4.35e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 64.59 E-value: 4.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 109 AFSTTELMMFYISFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLypyipQP 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAM-----RL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 189 TSTKHWSPLL-LNIALLMAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHyPFI 267
Cdd:PRK12663 198 NDMGDTATLTtIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLH-PLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 268 VLALWGALMTSSI-CLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRI 346
Cdd:PRK12663 276 ATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRS 355
|
250 260 270
....*....|....*....|....*....|
gi 1002160260 347 LLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12663 356 LQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-376 |
2.24e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 62.66 E-value: 2.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 59 DQTSSPLLVLSCWLTPLMILASqghLQHEPPTRKQIFTMTLVMVQPL-IILAFSTTELMMFYISFEATLIPTLILITRWG 137
Cdd:PRK07691 76 DMFAALLVLTSSIITFLVILYS---FQTIGIERERYYYYPSVLFMLAgVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 138 SQPERLSAGIYLLFyTLISSLPLLVAILYLHAQMGTLHFPTLKlypyIPQPTSTKHWSPLLLNIALL--MAFMVKAPLYG 215
Cdd:PRK07691 153 TKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADIS----VKIAELSAGQTGLITVVAILflFVFATKAGLFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSS 295
Cdd:PRK07691 228 LYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 296 VSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALP 375
Cdd:PRK07691 308 MIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIP 387
|
.
gi 1002160260 376 P 376
Cdd:PRK07691 388 P 388
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
195-395 |
1.29e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 60.15 E-value: 1.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 195 SPLLLNIA---LLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLtspLTNSLLHYPFIVLAL 271
Cdd:PRK08676 201 SPSVLGASflfIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSAL---LRQSGAAEQFSNVLI 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 272 WGALMTSSIC----LRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRIL 347
Cdd:PRK08676 278 GLGIFSIAVAafsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRF 357
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1002160260 348 LLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSP 395
Cdd:PRK08676 358 DRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISV 405
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-375 |
2.56e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 2.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 95 FTMTLVMVQPLIILAFSTTELMmfYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTL 174
Cdd:PRK12646 114 FYLTLFMFSMIGIVLSDNTILM--YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 175 HFPTLklypyIPQP--TSTKHWSPLLLNIALLMAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRIT 251
Cdd:PRK12646 192 NITEI-----LGQAdhIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 252 CLTSpLTNSLLhYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMI------QTHWSFS--------GA 317
Cdd:PRK12646 265 PLLG-LSNMYI-YIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIAsiyvfvlfAA 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1002160260 318 MILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALP 375
Cdd:PRK12646 343 LFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-418 |
2.79e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 59.01 E-value: 2.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 155 ISSLPLLVAILYLHAQMGTLHFPTLKLYPYIPQPTSTKhwspllLNIALLM-AFMVKAPLYGLHLWLPKAHVEAPIAGSM 233
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQ------VGLALLIfGLAVEAELFPLNAWAPDAYQAAPHPITV 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 234 LLAALLLKLGGYGIMRITCLTSPLT--NSLLHYpFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTH 311
Cdd:PRK08377 243 MFSAFVVKAGLYAMARILYLMQNANgwSSVLKL-VIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 312 WSFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLF 391
Cdd:PRK08377 322 AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGL 401
|
250 260 270
....*....|....*....|....*....|.
gi 1002160260 392 N----WSpptIILTGTATLLTASYTLSMLTT 418
Cdd:PRK08377 402 SagytWP---VALVLGASVVEAVYYFRLIHT 429
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-328 |
6.72e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.82 E-value: 6.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 75 LMILASQGHLQHEPPTRKQIFTMTLVMVQPLIILAfSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGI-YLLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 154 LISSLpLLVAILYLHAQMGTLHFPTlklypyIPQPTSTKHWSPLLLNIALLM---AFMVKAPLYGLHLWLPKAHVEAPIA 230
Cdd:COG1007 164 LSSGF-LLYGISLLYGATGSLNLAG------IAAALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTP 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 231 GSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLA----LWGALMTssicLRQIDLKSLIAYSSVSHMGLVVAAC 306
Cdd:COG1007 237 VTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGL 312
|
250 260
....*....|....*....|..
gi 1002160260 307 MIQTHWSFSGAMILMVSHGLTS 328
Cdd:COG1007 313 AAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-376 |
8.14e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 57.98 E-value: 8.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 117 MFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKlypyipqptsTKHWSP 196
Cdd:PRK06521 137 SFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR----------AAHLSP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 197 LLLNIALLMAFM---VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTspLTNSLLHYPFIVLALWG 273
Cdd:PRK06521 207 FWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDL--LGAPGWWWGVLVLALGA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 274 --ALMTSSICLRQIDLKSLIAYSSVSHMGLVVAA---CMI--------QTHWSFSGAMILMVSHGLTSSMLFCLANTNYE 340
Cdd:PRK06521 285 isAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLH 364
|
250 260 270
....*....|....*....|....*....|....*.
gi 1002160260 341 RTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06521 365 ATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
195-406 |
1.55e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 57.24 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 195 SPLLLNIALLM---AFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRitcltspLTNSLLHYP--FIV 268
Cdd:PRK12647 191 HPLYLAILLLVlggAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLAR-------LNPVLGGTPlwQTI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 269 LALWGA---LMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNYERTHSR 345
Cdd:PRK12647 262 LPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTR 341
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1002160260 346 ILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNWSPPTIILTGTATL 406
Cdd:PRK12647 342 DITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-387 |
1.77e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.67 E-value: 1.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 89 PTRKQIFTMTLVMVQPLIILAFS-------TTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTlISSLPLL 161
Cdd:PRK12662 99 PNRKEISVNKIPSFYSAFLLCLGgllgilvSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 162 VAILYLHAQMGTLHFPTLKLypyIPQPTSTKHwsplLLNIALLMAFM---VKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 238
Cdd:PRK12662 178 IGIGFLYAITGTLNMGDMFL---IIQDLPTNR----AIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGT 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 239 LLKLGGYGIMRI---------TCLTSPLTNSllhypFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQ 309
Cdd:PRK12662 251 STKVMIYLIIRIvydvfkanfVFTTLPFNNV-----FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLN 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 310 THWSFSGAMILMVSHGLTSSMLFCLANT---NYERTHSRILLltqGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSI 386
Cdd:PRK12662 326 TYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYI 402
|
.
gi 1002160260 387 M 387
Cdd:PRK12662 403 L 403
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-378 |
9.14e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 54.58 E-value: 9.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 59 DQTSSPLLVLSCWLTPLMILASQGHLQHEPPTRKqiFTMTLVMVQPLIILAFSTTELMMFYISFEATLIPTLILITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPR--FLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 139 QPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKL---------YPYIPQPTSTKHWSPL-LLNIALLMAFM 208
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGgsvgsgimdRGYYGGGAYESPLAPFaIIGILLLIGCI 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 209 VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIM-RITCL--TSPLTnsllhypFIVLALWGAL---MTSSICL 282
Cdd:MTH00032 237 GKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMiRSFPLfeKAPLT-------LLIITIFGALtafFAATVGL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 283 RQIDLKSLIAYSSVSHMGLVVaaCMIQTHWSFSGAMILMVSHGLTSSMLFCLA-----NTNYERTHSRILlltQGLQPLL 357
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSI 383
|
330 340
....*....|....*....|.
gi 1002160260 358 PLMATWWLLANLTNMALPPTT 378
Cdd:MTH00032 384 PFTYTMMLIGSFSIMGLPYLT 404
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-419 |
2.27e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 53.16 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 105 LIILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLklYPY 184
Cdd:MTH00020 123 LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV--FNM 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 185 IPQPTSTKHWSPLLLniaLLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRitclTSPLTN--SL 261
Cdd:MTH00020 201 VVSAPSSDITLICLF---LFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIR----SSPLFEqaPL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 262 LHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIqTHWSFSgaMILMVSHGLTSSMLFCLANtnyer 341
Cdd:MTH00020 273 ALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAG----- 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 342 thSRILLLTQ--------GLQPLLPLMATWWLLANLTNMALPPTT-----NLMAEL---SIMITLFNWspptiiLTGTAT 405
Cdd:MTH00020 345 --SVIHALSDeqdmrkmgGLISFLPLTYIFFLIGSLSLMGFPYLTgfyskDLILELafgQYYLIFAYW------LGCFSA 416
|
330
....*....|....
gi 1002160260 406 LLTASYTLSMLTTT 419
Cdd:MTH00020 417 LLTAFYSIRLIYLT 430
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-376 |
3.05e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 49.59 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 108 LAFSTTELMMFyISFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYPyipq 187
Cdd:PRK06525 129 LVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLH---- 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 188 pTSTKhwspLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITCLTSPLTNS 260
Cdd:PRK06525 203 -GSLK----YLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHV 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 261 LLhYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWS---FSGAMILMVSHGLTSSMLFCLANT 337
Cdd:PRK06525 271 IG-YVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlaLEGSIAYIFNHAFAKSLFFLVAGA 349
|
250 260 270
....*....|....*....|....*....|....*....
gi 1002160260 338 NYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06525 350 LSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
160-409 |
3.71e-06 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 49.52 E-value: 3.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 160 LLVAILYLHAQMGTLHFPTLKLYpyipqpTSTKHWSPL---LLNIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLA 236
Cdd:PRK07390 187 LLMGVVALSPLAGTLNFSDLAAW------AATANLDPLtatLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRN 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 237 ALLLKLGGYGIMRITCL--TSPLTNSLLhypfIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLV-VAACMIQThws 313
Cdd:PRK07390 260 SVVVATGAWVLIKLQPVlaLSPVALTVL----IVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVfIAVGLQQP--- 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 314 fSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFNW 393
Cdd:PRK07390 333 -DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAV 411
|
250
....*....|....*.
gi 1002160260 394 SPPTIILTGTATLLTA 409
Cdd:PRK07390 412 SPWLVGVLLLVNALTA 427
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
203-400 |
5.09e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 48.34 E-value: 5.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 203 LLMAFMVKAPLYGLHLWLPkahveaPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLHYPFIVLALWGALMTSSICL 282
Cdd:MTH00144 90 LLLGLCLKLGLFPFHFWVP------SVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 283 RQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGltsSMLFCLANTNYerthSRILLLTQGLQPLLPLMAT 362
Cdd:MTH00144 164 NQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSG---FLFFSLWSGDS----GSMKDLGSLKPSYKTGLSI 236
|
170 180 190
....*....|....*....|....*....|....*...
gi 1002160260 363 WWLLANLtnMALPPTTNLMAELSIMITLFNWSPPTIIL 400
Cdd:MTH00144 237 ISLLLSL--GGLPPFLGFCSKLLVLISSMESSPLLLIL 272
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
106-344 |
7.40e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 48.02 E-value: 7.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 106 IILAFSTTELMMFYISFEATLIPTLILITRWGSQPERLSAGI-YLLFYTLISSLpLLVAILYLHAQMGTLHFPTLKLYpy 184
Cdd:TIGR01770 115 IFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGSLNFEDLLLF-- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 185 ipQPTSTKHWSPLLLNIAL-LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLH 263
Cdd:TIGR01770 192 --LSNGMLNISLLLLGIVLiLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQ 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 264 YPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTS----SMLFCLANTNY 339
Cdd:TIGR01770 270 IFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLSLLRSYKD 349
|
....*
gi 1002160260 340 ERTHS 344
Cdd:TIGR01770 350 EWIEY 354
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-335 |
1.97e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.77 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 137 GSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYpyIPQPTSTKHWsplLLNIA---LLMAFMVKAPL 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQR--IAQLPAADRA---LLEAGaalLLVVFLIKAAM 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 214 YGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRI-TCLTSPLTNSLLHYPFIVLaLWGALMTSSI----CLRQID 286
Cdd:PRK12666 227 WPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWL-LPGGLATLAFgaigVLAAQR 302
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1002160260 287 LKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLA 335
Cdd:PRK12666 303 LRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
260-376 |
8.06e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.02 E-value: 8.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 260 SLLHYPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNY 339
Cdd:PRK06277 263 PSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVS 342
|
90 100 110
....*....|....*....|....*....|....*..
gi 1002160260 340 ERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06277 343 YRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-332 |
1.02e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 44.61 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 105 LIILAFSTTELMMFyISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLklypY 184
Cdd:MTH00210 124 MIVLVTSDNYVQLF-IGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTI----S 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 185 IPQPTSTKHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITCL--TSPLTnsl 261
Cdd:MTH00210 199 SLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLIIRSGPLfeGSPLA--- 274
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1002160260 262 lhypFIVLALWGAL---MTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQthwSFSGAMILMVSHGLTSSMLF 332
Cdd:MTH00210 275 ----LTIVTILGALtafFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS---NYSTSLFHLMNHAFFKALLF 341
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
140-332 |
1.07e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.50 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 140 PERLSAGI-YLLFYTLiSSLPLLVAILYLHAQMGTLHFPtlklypYIPQPTSTKHWsplllnIALLmAFMVKAPLYGLHL 218
Cdd:PRK12668 139 KAAVRAGFrYLLVHVL-GGVLLLAGILLHYAETGSFAFG------AIAGLGGTAAW------LILI-GFGVNAAFPPLHA 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItcltspltnsllhYP-FIVLALWGALMT---SSICLRQIDLKSLIAYS 294
Cdd:PRK12668 205 WLPDAYPEATVTGSVFLSAFTTKTAVYALARA-------------FPgTELLIYIGAAMAvygVFFALLENDLRRLLSYH 271
|
170 180 190
....*....|....*....|....*....|....*...
gi 1002160260 295 SVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLF 332
Cdd:PRK12668 272 IVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-376 |
1.15e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.82 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 99 LVMVQPLIILAFSTTELMMFyISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPT 178
Cdd:PRK12649 118 LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIAT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 179 LKlypYIPQPTSTKHWSPLLLN--IALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITCLTS 255
Cdd:PRK12649 197 IL---QDSELIENIKGHPLFLItlILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARIHPIFS 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 256 PLTNSLLHYPFIVLALwgALMTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQTH----WSFSGAMILMVSHGLTSSML 331
Cdd:PRK12649 273 GTEAWFILVSGTGMIT--MVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACL 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1002160260 332 FCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12649 351 FLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
194-332 |
2.73e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 43.47 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 194 WSPLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITCLTSPLtnsllhyPFI--VLA 270
Cdd:PRK07376 224 WLALLLCILVFLGPMAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGvFLVARMYPVFEQF-------PAVmtVIA 295
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1002160260 271 LWGAL---MTSSICLRQIDLKSLIAYSSVSHMGLVVAACMIQthwSFSGAMILMVSHGLTSSMLF 332
Cdd:PRK07376 296 WTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG---AYSAGLFHLMTHAYFKAMLF 357
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
111-305 |
1.36e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 41.11 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 111 STTELMMFYISFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVAILylhaqMGTLHFPTLKLYPYIPQPTS 190
Cdd:MTH00208 156 SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLS-----LSLINFNSWNLNEILSLNNS 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 191 TKHWSPLLLnIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRItcltSPLTNSLLHYPFIVL 269
Cdd:MTH00208 231 NSFLINILL-FGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGvFLLIRT----SPLISNSPWFLSLCL 304
|
170 180 190
....*....|....*....|....*....|....*...
gi 1002160260 270 ALWG--ALMTSSICLRQIDLKSLIAYSSVSHMGLVVAA 305
Cdd:MTH00208 305 ILGSltALFAASTAISQHDIKKIIAYSTTSQLGLMVVA 342
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
282-328 |
1.58e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 40.96 E-value: 1.58e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1002160260 282 LRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTS 328
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-392 |
1.74e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.97 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 155 ISSLPLLVAILYLHAQMGTLHFPTLKLYPyIPQPTSTKHWSPLLLNIALLmafmvkAPLYGLHLWLPKAHVEAPIAGSML 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRM-QQLPLGSDIWLLGVIGFGLL------AGIIPLHGWVPQAHANASAPAAAL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 235 LAALLLKLGGYGIMRITCL--TSPLTNSLLhypFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGL--------VVA 304
Cdd:PRK08042 218 FSTVVMKIGLLGILTLSLLggNAPLWWGVA---LLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIillglgagVTG 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 305 ACMIQTHW---SFSGAMILMVSHGLTSSMLFCLANTNYERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLM 381
Cdd:PRK08042 295 IALEQPALialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFA 374
|
250
....*....|.
gi 1002160260 382 AELSIMITLFN 392
Cdd:PRK08042 375 GEWVIYQSFFK 385
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
106-369 |
2.28e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.54 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 106 IILAFSTTELMMFYISFEATLIPTLILITRWGSQPerlSAGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKlypyi 185
Cdd:PRK06459 85 MAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNK---RPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLP----- 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 186 pqptstkhwSPLLLnIALLMAFMVKAPLYGLHL--WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITCLTSPLTNSLLH 263
Cdd:PRK06459 157 ---------SPVPL-ILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFG 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 264 YPFIVLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVVAAC--------MIQT--HWSFSGAMILMVSHGLTSSMLFC 333
Cdd:PRK06459 227 LTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSieHFSLITVILYSFAHSVAKTGLFL 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1002160260 334 LANTNYERTHSRI------------LLLTQGLQPLLPL---MATWWLLANL 369
Cdd:PRK06459 307 SSGLQEKQSITYSkkirnrwielglTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-413 |
2.60e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.29 E-value: 2.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 115 LMMFYISFEATLIPTLILItrwGSQPERLS---AGIYLLFYTLISSLPLLVAILYLHAQMGTLHFPTLKLYPyipqPTST 191
Cdd:PRK12644 128 LLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADP----PTGP 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 192 khwsplLLNIA---LLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITcltsPLTNSL 261
Cdd:PRK12644 201 ------AVSVAvvlILVGALSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLA----PGFADV 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 262 LHYPFIVLALWGALMTSS--ICLRQIDLKSLIAYSSVSHMGLVVAACMIQTHWSFSGAMILMVSHGLTSSMLFCLANTNY 339
Cdd:PRK12644 264 PVWRPTVLVLGLATMLLGgwRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIID 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1002160260 340 ERTHSRILLLTQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMITLFN----WSPPTIILTGTA--TLLTASYTL 413
Cdd:PRK12644 344 HSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalGPAGPVVLAGIVlgSILTVAYSL 423
|
|
| |
