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Conserved domains on  [gi|1030177684|ref|YP_009252449|]
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ATP synthase F0 subunit 6 (mitochondrion) [Caryanda sp. ZH-2016]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 8.69e-100

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 288.99  E-value: 8.69e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   1 MMTNLFSTFDPSTNIiNLSLNWSSTFLGLIIIPCMFWLMPSRINIMWNKLNITLHNEFKTLLGSSsFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSF-NLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  81 MLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1030177684 161 RLAANMIAGHLLMTLMGNTGPSMTMSLIYLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 8.69e-100

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 288.99  E-value: 8.69e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   1 MMTNLFSTFDPSTNIiNLSLNWSSTFLGLIIIPCMFWLMPSRINIMWNKLNITLHNEFKTLLGSSsFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSF-NLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  81 MLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1030177684 161 RLAANMIAGHLLMTLMGNTGPSMTMSLIYLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 3.59e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 152.75  E-value: 3.59e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   5 LFSTFDPST-NIINLSLNWSSTFLGLIII----PCMFWLMPSRINIMWNKLNITLHNEFKTLLGSSSFNGTTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  80 MMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1030177684 160 VRLAANMIAGHLLMTLMGNTGPSMTMSLI-YLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 1.25e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.38  E-value: 1.25e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  73 IFISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNL 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 153 IRPATLAVRLAANMIAGHLLMTLMGNTGPSMTMSLIYLLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
38-222 4.31e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 100.26  E-value: 4.31e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  38 LMPSRINIMWNKLNITLHNEFKTLLGSSSFNGTTFIFISIFIMMLFNNFMGLF---PYIFTSTSHLTLTFTIALPMWLSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 115 MLFGWINH-TNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAVRLAANMIAGHLLMTL---MGNTGPSMTMSLIYL 190
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLlagLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1030177684 191 LIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 1.29e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 91.29  E-value: 1.29e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  76 SIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINH-TNHMFSHLVPQGTPmALMSFMVMIETISNLIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1030177684 155 PATLAVRLAANMIAGHLLMTLMGNTGPSMTMSLiyLLIIGQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356   142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGV--LSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 8.69e-100

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 288.99  E-value: 8.69e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   1 MMTNLFSTFDPSTNIiNLSLNWSSTFLGLIIIPCMFWLMPSRINIMWNKLNITLHNEFKTLLGSSsFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSF-NLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  81 MLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1030177684 161 RLAANMIAGHLLMTLMGNTGPSMTMSLIYLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 1.45e-51

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 166.75  E-value: 1.45e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   1 MMTNLFSTFDP--STNIINLSLNWSSTFLGLIIIPCMFWLMPSRINIMWNKLNiTLHNEFKTLLGSSSFNGTTFIFISIF 78
Cdd:MTH00176    1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  79 IMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 159 AVRLAANMIAGHLLMTLMGNTGPSMTMSLIY---LLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAAMWGLLPVSPLigfLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 3.59e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 152.75  E-value: 3.59e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   5 LFSTFDPST-NIINLSLNWSSTFLGLIII----PCMFWLMPSRINIMWNKLNITLHNEFKTLLGSSSFNGTTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  80 MMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1030177684 160 VRLAANMIAGHLLMTLMGNTGPSMTMSLI-YLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIfALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 1.25e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.38  E-value: 1.25e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  73 IFISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNL 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 153 IRPATLAVRLAANMIAGHLLMTLMGNTGPSMTMSLIYLLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310    87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 2.19e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 137.94  E-value: 2.19e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   1 MMTNLFSTFDPSTNIINLSLN----WSSTFLGLIIIPCMFWLMPSRINIMWNKLNITLHNEFKTLLGSSsFNGTTFIFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  77 IFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPA 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 157 TLAVRLAANMIAGHLLMTLMGNTGPSMTMSLI---YLLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGIYAASALFSSIsstILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.73e-38

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 133.17  E-value: 1.73e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   3 TNLFSTFDPSTnIINLSLNWSSTFLGL---IIIPCMFWLmPSRINIMWNKLNITLhneFKTLLGSSSFNGTTFI--FISI 77
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFQNTNPNTAPWAglLTTV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  78 FIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPAT 157
Cdd:MTH00035   80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1030177684 158 LAVRLAANMIAGHLLMTLMGNTGPSMTMSLIY--LLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00035  160 LGLRLAANLTAGHLLIFLLSTAIWELSNSPLIsiITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 1.08e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 131.14  E-value: 1.08e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   1 MMTNLFSTFDPSTNIINL--SLNWSSTFLGLIIIPCMFWLMPSRINIMWNKLNITLHNeFKTLLGSSSFNGTTFIFISIF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSS-QVTRSSGLNLGGFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  79 IMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1030177684 159 AVRLAANMIAGHLLMTLMGNTGPSMTMSLIY----LLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVvsllLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 73-223 6.48e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 123.78  E-value: 6.48e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  73 IFISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNL 152
Cdd:MTH00120   72 ILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLL 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1030177684 153 IRPATLAVRLAANMIAGHLLMTLMG----NTGPSMTMSLIYLLIIgQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00120  152 IRPLALGVRLTANLTAGHLLIQLIStatlNLLPTMPTLSLLTLII-LLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 9.61e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 120.82  E-value: 9.61e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684   1 MMTNLFSTFDPSTNIinlslnwsSTFLGLIIIPCMFWLMPSRINIMWNKLNITLHNEFKTLL-------GSSSFNGTTFI 73
Cdd:MTH00179    1 MMLSMFDQFESPSLL--------GIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFtfqlmqpINKKGHKWAVL 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  74 FISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLI 153
Cdd:MTH00179   73 FLSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLI 152

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1030177684 154 RPATLAVRLAANMIAGHLLMTLMGNTGPSMTMSLIYLLIIGQ---MLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00179  153 RPLALGVRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-223 6.65e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 118.44  E-value: 6.65e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  73 IFISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNL 152
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1030177684 153 IRPATLAVRLAANMIAGHLLMTLMGNTGPSM--TMSLIYLLIIGQMLLL-ILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00132  152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLlpLMPTVAILTATLLFLLtLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-220 9.06e-31

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 112.74  E-value: 9.06e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  71 TFIFISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETIS 150
Cdd:MTH00101   69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1030177684 151 NLIRPATLAVRLAANMIAGHLLMTLMGN-----TGPSMTMSLIYLLIIgqMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00101  149 LFIQPMALAVRLTANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 72-223 1.56e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 109.67  E-value: 1.56e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  72 FIFISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISN 151
Cdd:MTH00073   71 LILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1030177684 152 LIRPATLAVRLAANMIAGHLLMTLMGNTG----PSMTMSLIYLLIIgQMLLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00073  151 FIRPLALGVRLTANLTAGHLLIQLISTATlvllPLMPTVSILTMIV-LFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 23-220 1.00e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 102.78  E-value: 1.00e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  23 SSTFLGLIIIpcMFWLM-------PSRINIMWNKLNITLHNEFKTLLGSSSFNGTTFIFiSIFIMMLFNNFMGLFPYIFT 95
Cdd:MTH00175   31 SSMMMVLAVI--IFWLLlkgdkliPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGLFPYVFT 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  96 STSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAVRLAANMIAGHLLMTL 175
Cdd:MTH00175  108 PTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAI 187

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1030177684 176 MGNTGPSMTMSLIYLLIIGQMLLLI----LESAVAMIQAYVFSILSTLY 220
Cdd:MTH00175  188 LSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 38-220 3.72e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 100.89  E-value: 3.72e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  38 LMPSRINIMWNKLNITLHNEFKTLLGSSSFNGTTFIfISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLF 117
Cdd:MTH00172   40 LIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLA 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 118 GWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAVRLAANMIAGHLLMTLMGNTGPSMTM-----SLIYLLI 192
Cdd:MTH00172  119 GFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLCasgflSLFPLLI 198

                         170       180
                  ....*....|....*....|....*...
gi 1030177684 193 IgqMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00172  199 M--VFITLLEIAVAVIQAYVFCLLTTIY 224
ATP-synt_A pfam00119
ATP synthase A chain;
38-222 4.31e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 100.26  E-value: 4.31e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  38 LMPSRINIMWNKLNITLHNEFKTLLGSSSFNGTTFIFISIFIMMLFNNFMGLF---PYIFTSTSHLTLTFTIALPMWLSF 114
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 115 MLFGWINH-TNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAVRLAANMIAGHLLMTL---MGNTGPSMTMSLIYL 190
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLlagLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1030177684 191 LIIGQMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-220 1.29e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 91.29  E-value: 1.29e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  76 SIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINH-TNHMFSHLVPQGTPmALMSFMVMIETISNLIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1030177684 155 PATLAVRLAANMIAGHLLMTLMGNTGPSMTMSLiyLLIIGQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356   142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGV--LSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 8.62e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 84.08  E-value: 8.62e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  73 IFISIFIMMLFNNFMGLFP-YIFTSTSHLTLTFTIALPMWLSFMLFG-WINHTNHMFSHLVPQGTPmalmsFMVMIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 151 NLIRPATLAVRLAANMIAGHLLMTLMGNTGPSMTMSLIYLLIIGqMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK05815  150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-220 5.03e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 82.68  E-value: 5.03e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  38 LMPSRINIMWNKLNITLHNEFKTLLGSSSFNGTTFIfISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLF 117
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 118 GWINHTNHMFSHLVPQGTPMALMSFMVMIETISNLIRPATLAVRLAANMIAGHLLMTLMGNTGPSMTMSLI----YLLII 193
Cdd:MTH00174  138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGIligsFVPFA 217

                         170       180
                  ....*....|....*....|....*..
gi 1030177684 194 GQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00174  218 ILIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-220 3.03e-12

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 64.76  E-value: 3.03e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  75 ISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALpmwLSFMLFGWINHTNH----MFSHLVpQGTPMALMSFMVMIETIS 150
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 151 NLIRPATLAVRLAANMIAGHL-----------LMTLMGNTGPSMTMSL-IYLliigqmllliLESAVAMIQAYVFSILST 218
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIvilslifisfiLKSYIVAVAVSVPFAIfIYL----------LELFVAFLQAYIFTMLSA 320


                  ..
gi 1030177684 219 LY 220
Cdd:PRK13419  321 LF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 64-223 8.07e-10

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 56.14  E-value: 8.07e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  64 SSSFNGTTFIFISIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFMLFGWINhtNHMFSHLVPQGTPMALMSF- 142
Cdd:MTH00087   45 SNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFs 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 143 MVMIETISNLIRPATLAVRLAANMIAGHLLMTLMgntgpsMTMSLIYLLIIgqMLLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:MTH00087  123 MLFVEIVSELSRPLALTLRLTVNLMVGHLISSLL------NFLGEKYVWLS--ILAIMMECFVAFIQSYIFSRLIYLYLN 194


                  .
gi 1030177684 223 E 223
Cdd:MTH00087  195 E 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 1.51e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 56.82  E-value: 1.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  95 TSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVMIETI-SNLIRPATLAVRLAANMIAGH-LL 172
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1030177684 173 MTLMGNTGPSMTMSLIYLLIIGQMLLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 67-217 1.33e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.10  E-value: 1.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  67 FNGTTFIFISIFIMMLFNNFMGL-FPYIFTSTSHLTLTFTIALPMWLSFMLFGWINHTNHMFSHLVPQGTPMALMSFMVM 145
Cdd:MTH00050   18 LGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCI 97

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1030177684 146 IETISNLIRPATLAVRLAANMIAGHLLMTLMGNTgpSMTMSLIYLLIIgqmLLLILESAVAMIQAY-VFSILS 217
Cdd:MTH00050   98 AETISYIIRPVVLILRPFINISLGCFGGVALGNL--CFISYWWFLVLF---FLFFYEVFVALVHWFiVSSILS 165
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 38-220 3.65e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 40.50  E-value: 3.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684  38 LMPSRINIMWNKLNITLHNEFKTLLgsSSFNGTTFIFI-SIFIMMLFNNFMGLFPYIFTSTSHLTLTFTIALPMWLSFML 116
Cdd:PRK13420   43 LDPGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHW 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1030177684 117 FG-----WINHTNHmfsHLVPQgtpmalmSFMVMIETISNLIRPATLAVRLAANMIaghllmtlmgntgpSMTMSLIYLL 191
Cdd:PRK13420  121 FGiraegLREYLKH---YLSPS-------PFLLPFHLISEITRTLALAVRLFGNIM--------------SLELAALLVL 176

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1030177684 192 IIGQML----LLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK13420  177 LVAGFLvpvpILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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