|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 710.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 1 MCSLSFFSLFLSSTLIFILGIYYLMIDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGES 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 81 NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 161 GWNYIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNC 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 241 GWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDC 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 321 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 401 DNNFYSSFSFDDKGYYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIALPYYLKFLTIFVVLLGSYLGYIISKFNFSHDLF 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 481 SLNMLSFVSFTGSMWFMPFLSTKFISYLPLKMGYYSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 1043378642 561 FWMFILVILFF 571
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
15-570 |
1.65e-173 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 502.84 E-value: 1.65e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 15 LIFILGIYYLMIDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFIL 94
Cdd:MTH00151 17 FLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 95 SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYIYYYDFISSS 174
Cdd:MTH00151 97 SMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFKLSG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 175 FemklITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYN-CGWFLLLIGCMTMF 253
Cdd:MTH00151 177 W----LGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSgFSSFLLFISLLTLL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFM 333
Cdd:MTH00151 253 MAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSL 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 334 PLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDK 413
Cdd:MTH00151 333 PLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDE 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 414 GYYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIALPYYLKFLTIFVVLLGSYLGYIiskfNFSHDLFSLNMLSFVSFTGS 493
Cdd:MTH00151 413 DFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFG----FWDSGFSSSKMVKLSFFFSS 488
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378642 494 MWFMPFLSTKFISYLPLKMGYYSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIFWMFILVILF 570
Cdd:MTH00151 489 MWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
14-571 |
6.98e-173 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 501.60 E-value: 6.98e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 14 TLIFILGIYYLMIDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFI 93
Cdd:MTH00207 19 ILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 94 LSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYIYYYDfiss 173
Cdd:MTH00207 99 LSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQ---- 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 174 SFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcgWF---LLLIGCM 250
Cdd:MTH00207 175 TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTY--WFnpaLLLTASL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 251 TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIV 330
Cdd:MTH00207 253 TMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLT 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 331 NFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSF 410
Cdd:MTH00207 333 NQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHL 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 411 DDKGYYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIALPYYLKFLTIFVVLLGSYLGYIISKFNFSHDLFSLNMLSFVSF 490
Cdd:MTH00207 413 EDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFA 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 491 TGSMWFMPFLSTKFISYLPLKMGYYSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLltFIFWMFILVILF 570
Cdd:MTH00207 493 SCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL--MMSFVLLTIIII 570
|
.
gi 1043378642 571 F 571
Cdd:MTH00207 571 M 571
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
17-570 |
5.17e-171 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 496.48 E-value: 5.17e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 17 FILGIYYLMIDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSM 96
Cdd:MTH00209 17 FLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 97 GFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNyIYYYDFISSSfe 176
Cdd:MTH00209 97 NFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL-- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 177 MKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCMTMFMA 255
Cdd:MTH00209 174 GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSLLLLGSLTTLMA 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 256 GLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPL 335
Cdd:MTH00209 254 SMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPI 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 336 TSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDKGY 415
Cdd:MTH00209 334 TSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 416 YISFGMIGLLFVAVFGGSLLSWLIFPIPHMIALPYYLKFLTIFVVLLGSYLGYIISKFNFshdlFSLNMLSFVSFTGSMW 495
Cdd:MTH00209 414 LNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF----FLIKGYKVNYFLSQMW 489
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1043378642 496 FMPFLSTKFISYLPLKMGYYSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIFWMFILVILF 570
Cdd:MTH00209 490 FLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
16-572 |
4.03e-119 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 364.66 E-value: 4.03e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 16 IFILGIYYLMIDYSVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILS 95
Cdd:MTH00211 43 LIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 96 MGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTAL-SNRIGDVAILISIAWML-NFGGWNYIYYYdfiSS 173
Cdd:MTH00211 123 MLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLF---IL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 174 SFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LDTYNCGWFLLLIGCMTM 252
Cdd:MTH00211 200 NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLfQNNQLILGAVLLLGALTM 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNF 332
Cdd:MTH00211 280 LFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKN 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 333 MPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDD 412
Cdd:MTH00211 360 LPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINE 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 413 KGYYISFGMIGLLFVAVFGGSLLSWLIFPIPHMI-ALPYYLKFLTIFVVLLGSYLGYIISKFnfshdLFSLNMLSFVSFT 491
Cdd:MTH00211 440 NYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELVNL-----THKQLKTSTLSFS 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 492 GSMWFMPFLSTKFISYLPLKMG-YYSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIFWMFILVILF 570
Cdd:MTH00211 515 NMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLF 594
|
..
gi 1043378642 571 FL 572
Cdd:MTH00211 595 LL 596
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
34-572 |
1.34e-98 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 311.71 E-value: 1.34e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 34 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 113
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 114 GLGLVSYCLVIYYQNVKSYGAGMLTA-LSNRIGDVAILISIAWM-LNFGGWNYiyyyDFISSSFEMKLITML-IMLAAMT 190
Cdd:MTH00004 146 GVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWEI----QQLFSPTQTPTLPLLgLILAATG 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYN-----CgwflLLIGCMTMFMAGLGANFEFDL 265
Cdd:MTH00004 222 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQtaltiC----LCLGALTTLFAATCALTQNDI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 266 KKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00004 298 KKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 346 SLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDKGYYISFGMIGLL 425
Cdd:MTH00004 378 ALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLA 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 426 FVAVFGGSLLSWLIFPI-PHMIALPYYLKFLTIFVVLLGSYLGYIISkfNFSHDLFSLNMLSFVSFTGSMWFMPFLSTKF 504
Cdd:MTH00004 458 LGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELS--NMTTTLTPPKQNTLHNFSNQLAFFNPLTHRL 535
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1043378642 505 ISYLPLKMGY-YSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIfwMFILVILFFL 572
Cdd:MTH00004 536 LPMTLLKSSQkIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFA--LTILLLLLLT 602
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-572 |
5.40e-97 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 308.44 E-value: 5.40e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 37 FNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLG 116
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 117 LVSYCLVIYYQNVKSYGAGMLTA-LSNRIGDVAILISIAW-MLNFGGWNY--IYYYDFISSSFeMKLITMLIMLAAMTKS 192
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLneILSLNNSNSFL-INILLFGILLAAAGKS 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 193 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDtyNCGWFL---LLIGCMTMFMAGLGANFEFDLKKII 269
Cdd:MTH00208 251 AQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS--NSPWFLslcLILGSLTALFAASTAISQHDIKKII 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 270 ALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCG 349
Cdd:MTH00208 329 AYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMG 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 350 MPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDKGYYISFGMIGLLFVAV 429
Cdd:MTH00208 409 TPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTI 488
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 430 FGGSLLSWLIFPIPHMIaLPYYLKFLTIFVVLLGSYLGYIISKFnFSHDLFSLNMLSFVSFTgsmWFMPFLSTKFISYLP 509
Cdd:MTH00208 489 ISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFSFLLS-LSSNPINSNFFSFLSNQ---WFFVNISHSIIISFS 563
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1043378642 510 LKMGYY-SSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIFWMFILVILFFL 572
Cdd:MTH00208 564 FFTSLFgSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLI 627
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-570 |
1.10e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 298.75 E-value: 1.10e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 29 SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISI 108
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 109 LLGWDGLGLVSYCLV-IYYQNVKSYGAGMLTALSNRIGDVAILISIAW-MLNFGGWNYIYYydFISSSFEMKLITMLImL 186
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNSTLPLLGLI-L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 187 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCMTMFMAGLGANFEFDL 265
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLeNNQTALTICLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 266 KKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 346 SLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDKGYYISFGMIGLL 425
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 426 FVAVFGGSLLSWLIFPIPHMIA-LPYYLKFLTIFVVLLGSYLGYIISKFNFShdlfSLNMLSFVSFTGSMWFMPFLSTKF 504
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGLLIALDLAKITSK----TTPKTKMHSFSNLLAFFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378642 505 ISYLPLKMGY-YSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIFWMFILVILF 570
Cdd:MTH00066 532 SPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
14-470 |
3.31e-91 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 292.44 E-value: 3.31e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 14 TLIFILGIYYLMIDYSVFVE-WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMF 92
Cdd:COG1009 41 AFVLSLLLFPAVLGGEVVVElYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLF 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 93 ILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTA-LSNRIGDVAILISIAWMLN-FGGWNY---IYY 167
Cdd:COG1009 121 MAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 168 YDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLL 246
Cdd:COG1009 201 APTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFaLSPVWLTVVAI 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 247 IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFM 326
Cdd:COG1009 281 IGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT-RDIRKM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 327 GSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE-MVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFY 405
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1043378642 406 SSFSFDDKGYYISFGMIGLLFVAVFGGSLLSWL---------IFPIPHMIALPYYLKFLTIFVVLLGSYLGYII 470
Cdd:COG1009 440 TPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
46-570 |
1.60e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 285.21 E-value: 1.60e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:MTH00108 78 LSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 126 YqnvksYG------AGMLTALSNRIGDVAILISIAW-MLNFGGWNYIYYydFISSSFEMKLITMLIMLAAMTKSAQIPFS 198
Cdd:MTH00108 158 W-----YGrtdantAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLLAATGKSAQFGLH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLL-IGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:MTH00108 231 PWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLcLGAITTLFTAICALTQNDIKKIVAFSTSSQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 278 GLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFY 357
Cdd:MTH00108 311 GLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFY 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 358 SKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDKGYYISFGMIGLLFVAVFGGSLLSW 437
Cdd:MTH00108 391 SKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISN 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 438 LIFP--IPHMiALPYYLKFLTIFVVLLGSYLGYIISkfNFSHDLFSLNMLSFVSFTGSMWFMPFLSTKFISYLPLKMGYY 515
Cdd:MTH00108 471 NIPPttIPQM-TMPLYLKLTALAVTILGFILALELN--LLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQK 547
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 516 SSKSL-DYGWGELLGGQGLYSLFIYMINYIqgwydSN----FKIYLLTFIFWMFILVILF 570
Cdd:MTH00108 548 LASMLlDLIWLEKILPKTISLIQMKASTTI-----SNqkglIKLYFLSFLITLTLSLLLF 602
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-470 |
2.49e-82 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 269.15 E-value: 2.49e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 34 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 113
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 114 GLGLVSYCLV-IYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLN-FGGWNYIYYYDFISSSFE--MKLITMLIMLAAM 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFQEVFALAPGAFFsaLTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLD-TYNCGWFLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFElSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 269 IALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 349 GMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDKGYYISFGMIGLLFVA 428
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1043378642 429 VFGGSLLSWLIFPI-----------PHMIALPYYLKFLTIFVVLLGSYLGYII 470
Cdd:TIGR01974 465 VFAGFFIVPLFEFLkgvlptsaepaLEHHHVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
51-398 |
9.06e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 267.85 E-value: 9.06e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 51 DWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYqnvk 130
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWW---- 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 131 sYG------AGMLTALSNRIGDVAILISIAWML-NFGGWNyIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPA 203
Cdd:MTH00137 163 -YGradantAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcgwfLLLIGCM------TMFMA--GLGANfefDLKKIIALSTLS 275
Cdd:MTH00137 241 AMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQ----TALTTCLclgaltTLFTAtcALTQN---DIKKIVAFSTSS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 276 QLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:MTH00137 314 QLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAG 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1043378642 356 FYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRL-FYYSM 398
Cdd:MTH00137 394 FFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-468 |
9.60e-78 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 257.39 E-value: 9.60e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 126 YQNVKSYGAGMLTA-LSNRIGDVAILISIAWML-NFGGWNYIYYYDFISSSFE-----MKLITMLIMLAAMTKSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGlgwsaLTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLD-TYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFElSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 278 GLMMsiLAMG---YPkLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLA 354
Cdd:PRK06590 318 GYMF--LALGvgaYA-AAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 355 GFYSKDLILEmVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNnfyssfsfDDKGY-------YISFGMIGLLFV 427
Cdd:PRK06590 395 GFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKE--------KEKIHhphespaVMTLPLIVLAVL 465
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1043378642 428 AVFGG-----SLLSWLIFP-----IPHMIALPYYLKFLTIFVVLLGSYLGY 468
Cdd:PRK06590 466 SVFAGalivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAW 516
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
34-569 |
1.65e-74 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 248.45 E-value: 1.65e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 34 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWD 113
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 114 GLGLVSYCLV-IYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGG---WNYIYYYDFISSSFEMKLITMLIMLAAM 189
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGsldFSSVFNMVVSAPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLL-LIGCMTMFMAGLGANFEFDLKKI 268
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 269 IALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 349 GMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYS-MSGDNNFYSSFSFDDKGYYISFGMIGLL-F 426
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTfLSNTNLKKAVFFHLHEGDWNLLLPLGILaL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 427 VAVFGGSLLSWLI--FPIPHMIALPYYLKFLTIFVVLLGSYLGYIIskFNFSHDLF----SLNMLSFVSFTGSMWFMPFL 500
Cdd:MTH00020 462 GSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLVIIL--YFYSSKTFrvpfSFIGRNSYTFLGSAWQFNYI 539
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1043378642 501 STKFISYLPLKMGYY-SSKSLDYGWGELLGGQGLYSLFIYMINYIQGWY-DSNFKIYLLTFIFWMFILVIL 569
Cdd:MTH00020 540 LNYFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGLSSLQsGLVFNYALVILIGVAIFIWGL 610
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
48-570 |
1.50e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 238.37 E-value: 1.50e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 48 LILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV-IYY 126
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 127 QNVKSYGAGMLTALSNRIGDVAILISIAWMLN-FGGWNYIYYYDFISSSFE---MKLITMLIMLAAMTKSAQIPFSSWLP 202
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLL-LIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 281
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 282 SILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDL 361
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 362 ILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSS--FSFDDKGYYISFGMIGLLFVAVFGGSL----- 434
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEvfIGVHESSWNITFPLLLLAFGSIFVGYLgkevv 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 435 LSWLIFPIphmiaLPYYLKFLTIFVVLLGSYLGYII------SKFNFSHDLFSLNMLSFVSFTGSMWFMPFLSTKFISYL 508
Cdd:MTH00210 476 LSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIynsmvfLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKN 550
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1043378642 509 PLKMGYY-SSKSLDYGWGELLGGQGLYSLFIYMINYIqgwydSNFKIYLLT-FIFWMFILVILF 570
Cdd:MTH00210 551 IWKFGHLiTYRIIDRGLLEIIGPRGISKVLIKLTQKI-----SNLQSGMVFnYALIMIIFTTLF 609
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
14-564 |
3.40e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 213.63 E-value: 3.40e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 14 TLIFILGIYYLMIDYSV----FVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIV 89
Cdd:MTH00095 3 ILIFLILFFFFFLLLFIlflpFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 90 LMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGgwnyiyyYD 169
Cdd:MTH00095 83 LIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YY 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 170 FISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLIGC 249
Cdd:MTH00095 156 FFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 250 MTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSI 329
Cdd:MTH00095 236 FTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNN 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 330 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFYysmsgdnNFYSSFS 409
Cdd:MTH00095 316 GNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWK-------SFFLSFS 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 410 FDDKGYYISFGMIGLLFVAVFGGSLLSWLIfpIPHMIALPYYLKFLTIFVVLLGSYLGYIISKFNFSHDLFSLNMLSFVS 489
Cdd:MTH00095 389 KVVNVYSSSVLMNFLSLMLVFFSVFFLWWL--NFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVD 466
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1043378642 490 FTGSMWFMPFLSTKFISYLPLKMGYYssksldygwgellgGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIFWMF 564
Cdd:MTH00095 467 YFAKNVIYKLKNLKFFDLFLNKFGYK--------------GFNFFSSFSFFFFSYMKSFKYNSLLILLFLIFLFL 527
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-401 |
4.74e-60 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 211.04 E-value: 4.74e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 126 YQNVKSYGAGMLTA-LSNRIGDVAILISIA---WMLNFGGWNYI--YYYDFISS----SFEMKLITMLIMLAAMTKSAQI 195
Cdd:PRK07376 165 WYDRKGAADAAQKAfVVNRVGDFGLLLGILglfWATGSFDFDGIadRLSELVSSgavsGWLALLLCILVFLGPMAKSAQF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 196 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTY-NCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTL 274
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFpAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTI 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 275 SQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKD--------CQDIRFMGSIVNFMPLTSVCFNVSSLS 346
Cdd:PRK07376 325 SQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLA 404
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1043378642 347 LCGMPFLAGFYSKDLILEMVCLSwvNCLIFFLYFFSTGLTASYSFRLFYYSMSGD 401
Cdd:PRK07376 405 ISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
14-570 |
2.39e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 203.65 E-value: 2.39e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 14 TLIFILGIYYLMIDYSVfVEWELFNLNGSMVVMT---LILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVL 90
Cdd:MTH00032 40 TLIALFLAYEVLINDAV-VHIELYKWIESEIFIThigLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 91 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQN-VKSYGAGMLTALSNRIGDVAILISIAWM------LNFGGWN 163
Cdd:MTH00032 119 LFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFN 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 164 ------------YIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF 231
Cdd:MTH00032 199 ggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 232 SPMLDTYNCGWFLLLI-GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAM-GYPKLAFFHLLAHALFKALLFMC 309
Cdd:MTH00032 279 FPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLS 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 310 AGSMIHNLK-DCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCL-------------------- 368
Cdd:MTH00032 359 AGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdig 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 369 ----------------SWVNCLIFFLYFFSTGLTASYSFRLFYYSM------SGDNNFYSSFSFDDKGYYISFGMigLLF 426
Cdd:MTH00032 439 ikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFYSIRLVYITFiispnsPKESLISSHINIVDKRVLTVLSL--LCF 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 427 VAVFGGSLLS-WLIFPIPHMIaLPYYLKFLTIFVVLLGSYLGYIISKFNFSHDLF-------SLNMLSFVSFTGSMWFMP 498
Cdd:MTH00032 517 GAIFVGYLIQdILIGDIEHPI-VPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYwgfdpigPSFLLSIYSFLGGAWQGD 595
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1043378642 499 FLSTKFISYLPLKMGYYSS-KSLDYGWGELLGGQGLYSLFIYMINYIQGWYDSNFKIYLLTFIFWMFILVILF 570
Cdd:MTH00032 596 HLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIFLALW 668
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-382 |
4.12e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 185.21 E-value: 4.12e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 102 SPNLISILLGWDGLGLVSYCLVIYY-QNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYIY----YYDFISSSFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 177 MKLITMLIMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW--FLLLIGCMTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1043378642 331 NFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFS 382
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
40-364 |
3.73e-48 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 180.24 E-value: 3.73e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 40 NGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 120 YCLVIYYQNVKSYGAgMLTALSNRIGDVAILISIAWMLNFGGWNYIYyyDFISSSF------EMKLITMLIMLAAMTKSA 193
Cdd:PRK12650 147 FFLIARSGSGGEAGS-IRTLILTFFGGLTLLAAVAIAATQTGTTSLS--GILHSDVwaekpgLTTVVAVLIAVAAFTKSA 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTyNCGWFLLLIGC--MTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK12650 224 QFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD-VAVWNWLLIIVgmITALMGAVFAVQKTDLKKLTAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 272 STLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLC 348
Cdd:PRK12650 303 STVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMA 381
|
330
....*....|....*.
gi 1043378642 349 GMPFLAGFYSKDLILE 364
Cdd:PRK12650 382 AVPPLFGFVSKEGMLT 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
37-364 |
4.22e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 178.96 E-value: 4.22e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 37 FNLNGSMVvmtliLDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLG 116
Cdd:PRK12647 54 LGVNLSFL-----LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 117 LVSYCLVIY-YQNVKS----------YGAGMLTALSNRI--GDVAILISIAWMLNFGgwnyiyyyDFISSSFEMKLITML 183
Cdd:PRK12647 129 ITSFLLIGFnHEREAArraalqallvTGGGGLALLAGLIllGNVTGTYSLSELLASG--------DVIREHPLYLAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 184 IMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCMTMFMAGLGANFE 262
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 263 FDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVC 339
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAA 359
|
330 340
....*....|....*....|....*
gi 1043378642 340 FNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12647 360 ALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-396 |
1.16e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 169.17 E-value: 1.16e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 127 QNVKSYGAGMLTALSNRIGDVAILISIAWM-LNFGGWNYIYYYDFIS--SSFEMKLITMLIMLAAMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYN----CGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADpalfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 279 LMMSILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1043378642 356 FYSKDLILEMVcLSWVNCLIFFLYFFSTGLTASYSFRLFYY 396
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-366 |
1.70e-46 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 174.65 E-value: 1.70e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 127 -QNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYIYYY----DFISSSFEMKLITMLIMLAAMTKSAQIPFSSWL 201
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAViasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLDTYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 281 MSILAMGYPKL----------------AFFHLLAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|..
gi 1043378642 345 LSLCGMPFLAGFYSKDLILEMV 366
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAEA 410
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-405 |
8.49e-44 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 166.22 E-value: 8.49e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 67 LVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTA-LSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAfVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 146 DVAILISIA---WMLN-------FGGWNYIYYYDFISSSFeMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALV 215
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 216 HSSTLVTAGVYLLIRFSPMLDTY----NcgwFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKL 291
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIpyimN---LISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRA 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 292 AFFHLLAHALFKALLFMCAGSMIHNL--------KDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:CHL00025 342 ALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1043378642 364 EMvclSWVNCLIF-FLYFFSTGLTASYSFRLFYYSMSGDNNFY 405
Cdd:CHL00025 422 ND---SWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHLRVH 461
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-392 |
1.63e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 166.52 E-value: 1.63e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 127 QNVKS--YGAGM-LTALSnrIGDVAILisiAWMLNFGgwnyiyyydFISSSFEMK----------------LITMLIMLA 187
Cdd:PRK12648 151 HHRADarRGARMaLTVTG--AGGLALL---AGVLLLG---------HIVGSYDLDvvlaagdlirahplypPALVLILLG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 188 AMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcGWFLL--LIGCMTMFMAGLGANFEFDL 265
Cdd:PRK12648 217 AFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTE-EWFWIvgGAGLITLLLGAYFALFQHDL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 266 KKIIALSTLSQLGLMMSILAMGYPK---LAFFHLLAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNV 342
Cdd:PRK12648 296 KGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMV 374
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1043378642 343 SSLSLCGMPFLAGFYSKDL----ILEMVCLSWVNCLIFFLYFFSTGLTASYSFR 392
Cdd:PRK12648 375 AAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-570 |
1.37e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 150.78 E-value: 1.37e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 389 YSFRLFYYSMSGDNNFYSSFSFDDKGYYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIALPYYLKFLTIFVVLLGSYLGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 469 IISKFNFSHDLFSLNMlSFVSFTGSMWFMPFLSTKFISYLPLKMGYYSSKSLDYGWGELLGGQGLYSLFIYMINYIQGWY 548
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 1043378642 549 DSNFKIYLLTFIFWMFILVILF 570
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
50-364 |
3.63e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 159.15 E-value: 3.63e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 50 LDWMSLIFMSFVMYISSLVIYYSEDYMLGES-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY-YQ 127
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 128 NVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYIY----YYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPA 203
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNC-GWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 282
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 283 ILAMG--------------YPKLAF---FHLLAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:PRK12646 316 MVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330
....*....|....*....
gi 1043378642 346 SLCGMPFLAGFYSKDLILE 364
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-395 |
9.44e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 158.16 E-value: 9.44e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYML-GESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 126 YQNVK-SYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYIYyyDFISSSFEMKLIT---MLIMLAAMTKSAQIPFSSWL 201
Cdd:PRK12644 149 YAERAaSRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLS--ELLADPPTGPAVSvavVLILVGALSKSAIVPFHFWL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:PRK12644 227 PGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 281 MSILAMGYPKLAFFHL---LAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFY 357
Cdd:PRK12644 307 TVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFV 385
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1043378642 358 SKDLILEMV----CLSWVNCLIFFLYFFSTGLTASYSFRLFY 395
Cdd:PRK12644 386 AKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
15-470 |
1.55e-40 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 154.27 E-value: 1.55e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 15 LIFILGIYYLMIDY-SVFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFI 93
Cdd:MTH00063 7 LLLCLLIFFLFLVGvSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 94 LSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIawmlnfgGWNYIYYYDFIss 173
Cdd:MTH00063 87 LVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLI-------GLSCWGGSGSF-- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 174 sfemkLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCMTMF 253
Cdd:MTH00063 158 -----LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHN-----LKDCQDIRFMGS 328
Cdd:MTH00063 233 ITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGsggsqSSNCVYSSILYG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 329 IVNFMPLTSVCfnvssLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTGLTASYSFRLFyysmsgdNNFYSSF 408
Cdd:MTH00063 313 SWNLFYLFLLV-----LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC-------LILFGVK 380
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1043378642 409 SFDDKGYYISFGMIGLLfvaVFGGSLLSWLIFPI-PHMIALPYYLKFLTIFVVLLGSYLGYII 470
Cdd:MTH00063 381 SSLSSGVRFLFFNSGLM---VFLWLFINYYVFLLlDEVVYLGVFISLVLLLVQLLGLLVGVLF 440
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
47-366 |
7.62e-40 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 155.08 E-value: 7.62e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMLGES-NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 126 -YQNVKS-YGA--GMLTALSNRIGDVAILISIAWMLN-FGGWNYIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSW 200
Cdd:PRK12645 153 wYEREASrYGAqkSMLITVFGGLSMLGGFILLYIMTGsFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 201 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcGWFLL--LIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:PRK12645 233 LPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ-VWFWTvtLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 279 LMMSILAMGYPKL----------------AFFHLLAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNV 342
Cdd:PRK12645 312 LIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALI 390
|
330 340
....*....|....*....|....
gi 1043378642 343 SSLSLCGMPFLAGFYSKDLILEMV 366
Cdd:PRK12645 391 GALSMAGLPPFNGFLSKEMFFESM 414
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
14-363 |
1.08e-38 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 148.20 E-value: 1.08e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 14 TLIFILGIYYLMIDYSVFVEWELFNLnGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMlGESN--------MNRF 85
Cdd:PRK06525 38 TLCMLSLAYAFYQAGKVAVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYM-SPGNrehpvhegTGRY 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 86 IIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYI 165
Cdd:PRK06525 116 YAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFAL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 166 YYYDFISSSfeMKLITML-IMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTY--NCGW 242
Cdd:PRK06525 196 SALSGLHGS--LKYLVFLgILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphVIGY 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 243 FLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGY--PKLAF----FHLLAHALFKALLFMCAGSMIHN 316
Cdd:PRK06525 274 VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGALSYS 353
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1043378642 317 LkDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06525 354 C-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-364 |
2.42e-33 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 135.73 E-value: 2.42e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 44 VVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV 123
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 124 IYYQN--VKSYGAG---MLTALSNRIGDVAILISIAWMLNFGGWNYIYYYDFISS--SFEMKLITM-LIMLAAMTKSAQI 195
Cdd:PRK12649 152 GYWRHrpESVYGATkslLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENikGHPLFLITLiLIFIGAAAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 196 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcGWFLLL--IGCMTMFMAGLGANFEFDLKKIIALST 273
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 274 LSQLGLMMSIlaMGY-----PKLAF----FHLLAHALFKALLFMCAGSMIHNLKdCQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK12649 311 ISQLAYLMTM--YGYttyhePGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340
....*....|....*....|
gi 1043378642 345 LSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-396 |
1.15e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 125.38 E-value: 1.15e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSedYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 127 QNVKSYGAGMLTALSNRIGDVAILISIAwmlnfggwnYIYyydFISSSFEMKLIT-------------MLIMLAAMTKSA 193
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVG---------LLY---GVTGTLNMADLAgalaenptvvtafGFVLLALALKAA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS------PMLDTYNCGWFLLLIGCMTMFMAGLGANFEFDLKK 267
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 268 IIALSTLSQLGLMMSILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK08375 298 VLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVAS 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1043378642 345 LSLCGMPFLAGFYSK-DLILEMVCLSWVNCLIFFLyfFSTGLTASYSFRLFYY 396
Cdd:PRK08375 377 LSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-312 |
8.27e-28 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 117.11 E-value: 8.27e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 53 MSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIiVLMFIL-SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKs 131
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVR-ALAGVLaAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 132 ygAGMLTA----LSNRIGDVAILISIA-WMLNFGGWNYIYYYDFIS---SSFEMKLITMLIMLAAMTKSAQIPFSSWLPA 203
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAaqgASPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 204 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDTYNCG-WFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS 282
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 1043378642 283 ILAMGYPKLAFFHLLAHALFKALLFMCAGS 312
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-369 |
2.76e-26 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 113.44 E-value: 2.76e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 91 MFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKS-YGAGMLTALSNRIGDVAILISIAWMlnfggWNYIYYYD 169
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 170 FIS------SSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS-PMLDTYNCG 241
Cdd:PRK06521 196 FAAmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfDLLGAPGWW 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 242 W--FLLLIGCMTMFMAGLGANFEFDLKKIIALST-------LSQLGLMMSILAMGYPKLA-------FFHLLAHALFKAL 305
Cdd:PRK06521 275 WgvLVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSL 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1043378642 306 LFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLS 369
Cdd:PRK06521 355 LFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
1.66e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 110.98 E-value: 1.66e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDY---MLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 123 VIY-YQNVKSYGAGMLTALSNRIGDVAILISIAWM-LNFGGWNYIYYYdfiSSSFEMKLITMLIMLAAMTKSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW--FLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 278 GLMM--------------SILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVS 343
Cdd:PRK08667 307 GIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 1043378642 344 SLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-364 |
7.44e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 104.65 E-value: 7.44e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 79 ESNMNRFIIIVLMFIL-SMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGM-LTALSNrIGDVAILISIAWM 156
Cdd:PRK07234 89 ESAKTRFFYAQLLILHgSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAVLV 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 157 LNFGGwnyiyYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLD 236
Cdd:PRK07234 168 YQANG-----TFAFSGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 237 TYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLmmsILAMgyPKLAFFHLLAHALFKALLFMCAGSmIHN 316
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGF---ILAA--PLVGGLYALAHGLVKSTLFLCAGA-LPS 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1043378642 317 LKDCQDIRFMGSIVNFMPLTsvcfnVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07234 315 RNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
140-387 |
3.53e-23 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 103.84 E-value: 3.53e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 140 LSNRIGDVAILISIAWMLNF-GGWNYIYYYDFISSSFEMKLITMLIMLA----AMTKSAQIPFSSWLPAAMAAPTPVSAL 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLDPLTATLLGLAliagPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 215 vHSSTLVTAGVYLLIRFSPMLD----TYNcgwFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPK 290
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLAlspvALT---VLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 291 LAFFHLLAHALFKALLFMCAGSMIHNlKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSkdlILEMVCLSW 370
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLW 409
|
250
....*....|....*...
gi 1043378642 371 VNCLIFFLYF-FSTGLTA 387
Cdd:PRK07390 410 AVSPWLVGVLlLVNALTA 427
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-395 |
4.56e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 102.59 E-value: 4.56e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 48 LILDWMSLIFMSFVMYISSLVIYYSEDYMLGES--NMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:PRK06589 79 LHLEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 126 YQNVKSYGAGmLTALSNRIGDVAILISIAWMLNFGGWNYIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAM 205
Cdd:PRK06589 159 TRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 206 AAPTPVSALVHSSTLVTAGVYLLIR-------FSPMLDTYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 279 LMMSILAMGYPK---LAFFHLLAHALFKALLFMCAGSmIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 355
Cdd:PRK06589 318 LALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1043378642 356 FYSKDLILEMVCLS---WVNCLIFFLYFFSTGLTASYSFRLFY 395
Cdd:PRK06589 397 FISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-366 |
6.91e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 99.40 E-value: 6.91e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 50 LDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNV 129
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 130 -KSYGAGMLTALSNRIGDVAILISIAWML-NFGGWNYIYYYDFIS-SSFEMKLITMLIMLAAMT-KSAQIPFSSWLPAAM 205
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSeNPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 206 -AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLDTYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 280 MM-----SILAMGYPKL----------AFFHLLAHALFKALLFMCAGSMIHNLkDCQDIRFMGSIVNFMPLTSVCFNVSS 344
Cdd:PRK08376 326 MLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340
....*....|....*....|..
gi 1043378642 345 LSLCGMPFLAGFYSKDLILEMV 366
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYESS 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-395 |
2.13e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 94.65 E-value: 2.13e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 127 QNVK-SYGAGMLTALSNRIGDVAILISIAWMLN-FGGWN--------YIYYYDFISSSFEMKLITMLIMLAAMT-----K 191
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 192 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML--DTYNCGWFLLLIGCMTMFMAGLGA-------NF 261
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgISPSLIDFRAALSPILIILGAVSAiigalmmVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 262 EFDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSV 338
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378642 339 CFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTgLTASYSFRLFY 395
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
36-312 |
4.32e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 90.48 E-value: 4.32e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 36 LFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMnRFIIIVLMFIL---SMGFLiiSPNLISILLGW 112
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFALFTFTTgfaSLAWL--SGDLRLMALCW 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 113 dglGLVSYCLVIYYQNVKSYG----AGMLTALSNRIGDVAILISIAWM-LNFGGWnyiYYYDFIS-------SSFEMKLI 180
Cdd:PRK08601 133 ---GATLLGLTLLIGLNKGWKvareAAKISGMLFLISWLALALAIVWLfIATGEW---QLTSVLSnenlaqlGTWEKTGI 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 181 TMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCMTMFMaGLGAN 260
Cdd:PRK08601 207 NLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLI-GTGIS 284
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1043378642 261 F-EFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGS 312
Cdd:PRK08601 285 LvQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
7.65e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 89.95 E-value: 7.65e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 105 LISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGwnyiyYYDFISSSFEMKLITMLI 184
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETG-----SFAFGAIAGLGGTAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 185 MLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmldtyncGWFLLL-IGC-MTMFMAGLgANFE 262
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGAaMAVYGVFF-ALLE 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 263 FDLKKIIALSTLSQLGLMMSILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVC 339
Cdd:PRK12668 262 NDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGT-EKLTELGGLYRSMPLTALF 340
|
250 260
....*....|....*....|....
gi 1043378642 340 FNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12668 341 CLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
183-393 |
1.37e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 85.59 E-value: 1.37e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 183 LIMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCG----WFLLLIGCMTMFMAGL 257
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWssvlKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 258 GANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNfMP 334
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR-MP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1043378642 335 LTSVCFNVSSLSLCGMPFLAGFYSKDLILeMVCLSWVNCLIFFLYFFSTGLTASYSFRL 393
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
174-394 |
6.71e-16 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 80.51 E-value: 6.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 174 SFEMKLITMLIMLAA-MTKSAQIPFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS-PML--DTYNCGWFLLLIG 248
Cdd:COG1008 204 PLTAQLLLFLAFFIAfAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFpeASAYFAPLLAALG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 249 CMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRF 325
Cdd:COG1008 283 VIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPlglQGAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIAD 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 326 MGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMvclSW-VNCLIFFLYFFSTGLTASYSFRLF 394
Cdd:COG1008 362 LGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLG---AFqVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
17-395 |
1.84e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.66 E-value: 1.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 17 FILGIYYLMIDYSVFV-EWELFNLNGSMVVMTLILDWMSLIFMSfvmyISSLVIYYSEDYMLGESNMNR--FIIIVLMFI 93
Cdd:PRK08668 33 ALPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAM----ISLLVIFSVAFFMVSEKTKNDayFNMFALMSL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 94 LSMGFLIISPNLISILLGWDGLGLVSYcLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLN-FGGWNYIYYYDFIS 172
Cdd:PRK08668 109 AGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 173 --SSFEMKLI-TMLIMLAAMTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLDTYNC-------- 240
Cdd:PRK08668 188 ndTSTGFALIvFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyr 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 241 -----GWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGS 312
Cdd:PRK08668 267 gvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 313 MIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVcLSWVNCLIFFLYFFSTGLTASYSFR 392
Cdd:PRK08668 347 VIYRTGT-TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFR 424
|
...
gi 1043378642 393 LFY 395
Cdd:PRK08668 425 PLA 427
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
4.07e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 72.17 E-value: 4.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 195 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYN--CGWFLLLIGCMTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPlwWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 272 STLSQLGLMM-------SILAMGYPKL-------AFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTS 337
Cdd:PRK08042 276 HTLENIGIILlglgagvTGIALEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 1043378642 338 VCFNVSSLSLCGMPFLAGF 356
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
5.21e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 71.30 E-value: 5.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYmLGESNMNR--FIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDY-LERRGLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 124 IYYQNVKSYGAGM----LTALSNRIgdvaILISIAWMLNF-GGWNYIYYYDFISSSFEMK---LITMLIMLAAMT-KSAQ 194
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLAfKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 195 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLDTYNCGWFLLL--IGCMTMFMAGLGANFEFDLKKII 269
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLLavLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 270 ALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLS 346
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330
....*....|...
gi 1043378642 347 LCGMPFLAGFYSK 359
Cdd:COG1007 378 LAGIPPTAGFFGK 390
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-364 |
1.82e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 69.59 E-value: 1.82e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 177 MKLITMLIMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW---FLLLIGCMTM 252
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHnLKDCQDIRFMGSI 329
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190
....*....|....*....|....*....|....*
gi 1043378642 330 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
180-363 |
3.49e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 68.82 E-value: 3.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 180 ITMLIMLAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML---DTYNCGWFLLLIGCMTMFMAG 256
Cdd:PRK12663 209 IALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATMAAITMVIGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 257 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHnLKDCQDIRFMGSIVNFM 333
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKE 366
|
170 180 190
....*....|....*....|....*....|
gi 1043378642 334 PLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
88-394 |
3.76e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.81 E-value: 3.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 88 IVLMFILSMGFLII--SPNLISILLGWDGLGLVSYCLVIYYQNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYI 165
Cdd:TIGR01972 109 YALLLLLEAGVIGVflALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFD 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 166 Y--YYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS-PML-DTYNC 240
Cdd:TIGR01972 189 LleLLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFpDASLY 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 241 G-WFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL-MMSILAMGYPKL--AFFHLLAHALFKALLFMCAGsMIHN 316
Cdd:TIGR01972 268 FaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFSFNELGIsgAVFQMISHGLITAALFLLVG-VLYE 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1043378642 317 LKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILemVCLSWVNCLIFFLYFFSTGLTASYSFRLF 394
Cdd:TIGR01972 347 RAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL--LGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
140-401 |
5.99e-12 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 67.92 E-value: 5.99e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 140 LSNRIGDVAILISIAWM-----LNFGGWNYIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMA-APTPVSA 213
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 214 LvHSSTLVTAGVYLLIRFS-PMLD--TYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILAMGYP 289
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 290 KL--AFFHLLAHALFKALLFMCAGSMIHNLKDcQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILemVC 367
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LG 403
|
250 260 270
....*....|....*....|....*....|....
gi 1043378642 368 LSWVNCLIFFLYFFSTGLTASYSFRLFYYSMSGD 401
Cdd:PRK05846 404 SFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-394 |
9.64e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.47 E-value: 9.64e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 182 MLIMLAAmtKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW----FLLLIGCMTMFMAG 256
Cdd:PRK08676 212 IFIGFLA--KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEqfsnVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 257 LGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAF---FHLLAHALFKALLFMCAGsMIHNLKDCQDIRFMGSIVNFM 333
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1043378642 334 PLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-EMVCLS-WVNCLIFFLYFFSTGLTASYSFRLF 394
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
177-363 |
2.64e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.11 E-value: 2.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 177 MKLITMLIMLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLD----TYNCGWFLLLIGCMT 251
Cdd:PRK06458 213 MKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDaaigSDFPGRLLLIFGLLS 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 252 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPkLAFF----HLLAHALFKALLFMCAGSMIHNlKDCQDIRFMG 327
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIR 369
|
170 180 190
....*....|....*....|....*....|....*.
gi 1043378642 328 SIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
191-364 |
4.03e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 65.37 E-value: 4.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 191 KSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLDTYNCGW-FLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 269 IALSTLSQLGLMMSILAMGYPK---LAFFHLLAHALFKALLFMCAGsMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSL 345
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
|
170
....*....|....*....
gi 1043378642 346 SLCGMPFLAGFYSKDLILE 364
Cdd:PRK12665 380 NLGGIPPFSGFIGKVALLE 398
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
2.86e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 59.45 E-value: 2.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYmLGESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPY-LEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 126 YQNVKSYGAGM----LTALSNRIgdvaILISIAWMLNFGG---WNYIYYYDFISSSFEMKLITMLIMLAA--MTKSAQIP 196
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGATGslsFAGIAKALADGSGNSLLLLFGLVFLLVglAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 197 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPM-LDTYNCGWFLLLIG--CMTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVaFGGLSEDWQQVLAIiaIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 273 TLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCG 349
Cdd:PRK05777 302 SIAHAGYLLVGLAAGTAegySAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 1043378642 350 MPFLAGFYSK 359
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-359 |
1.41e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 54.35 E-value: 1.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 177 MKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCMTMFMAG 256
Cdd:PRK12662 208 IQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 257 LG-------ANFEFDLKKIIALSTLSQLG---LMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCqDIRFM 326
Cdd:PRK12662 288 LAivfgsvlAILSKDIKRIFAYSSISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDC 366
|
170 180 190
....*....|....*....|....*....|...
gi 1043378642 327 GSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 359
Cdd:PRK12662 367 LNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-312 |
3.81e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 52.87 E-value: 3.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 57 FMSFVMYISSLVIYYSEDYMLGESNMNRFIIIVLMF-ILSMGFLIISPNLISILLGWDGLGLVSYCLVIYYQNvKSYGAG 135
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 136 MLTALSNrigdvailISIAWMLNFGGWNYIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPF--SSWLPAAMAAPTPVSA 213
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 214 LVHSSTLVTAGVYLLIRFSPMLDTYNCGWF---LLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAM---- 286
Cdd:PRK06459 196 AILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270
....*....|....*....|....*....|....*
gi 1043378642 287 --------GYPKLA-FFHLLAHALFKALLFMCAGS 312
Cdd:PRK06459 276 kqlitsieHFSLITvILYSFAHSVAKTGLFLSSGL 310
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
5.51e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 51.75 E-value: 5.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 181 TMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYncgwFLLLIGCMTMFMAGLGAN 260
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 261 FEFDLKKIIALSTLSQLGLMMSILAMGyPKLAFFHLLAHALFKALLFMcagsMIHNLKdCQDIRFMGSIVNFMPLTSVCF 340
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 1043378642 341 NVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-440 |
9.21e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 51.65 E-value: 9.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMnrfiIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY 126
Cdd:PRK12664 31 EPVYNLDLVLFIVLSFSLALIFLYILPIKNMRFSEM----LCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 127 QNVKSYGAGMLTALSNRIGDVAILISIAWMLNFGGWNYIYyydfisssfemkliTMLIMLAAMTKSAQIPFSSWLPAAMA 206
Cdd:PRK12664 107 CPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYC--------------KLLFMLGLLINCACFPASSWVVDAYP 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 207 APTPVSALVHSstLVTAGVYLLIrfspMLDTYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAM 286
Cdd:PRK12664 173 AASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 287 GYPK-----LAFFHLLAHALFKALLFMCAGSMIHNLKDCqDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDL 361
Cdd:PRK12664 247 SGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTRKF-NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 362 ILEMVCLSWVNCLIFFLYF--FSTGLTASYSFRLFYY---SMSGDNNFYSSFSFDDKgyyisFGMIGLLFVAVFGGSLLS 436
Cdd:PRK12664 325 ITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYafiSKSKSKPEAEKVYIGSK-----LSMIILVLICVVLGMFNS 399
|
....
gi 1043378642 437 WLIF 440
Cdd:PRK12664 400 YLLF 403
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-363 |
1.83e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 50.62 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 182 MLIMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPML------DTYNCGWFLLLIGCM-TMF 253
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLaTLA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKL---AFFHLLAHALFKALLFMCAGSM----------------I 314
Cdd:PRK12666 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeL 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1043378642 315 HNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12666 372 YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-359 |
7.22e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 48.85 E-value: 7.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 51 DWMSLIFMSFVMYISSLVIYYSEDYML-GESNMNRFIIIVLMFILSMGFLIISPNLISILLGWDGLGLVSYCLVIYY-QN 128
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 129 VKSYGAGMLTALSNRIGDVAILISIAWM--LNFGGWNYIYYYDFISSSFEMKLITMLIMLAAMT-----KSAQIPFSSWL 201
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 202 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTY-NCGWFLLL--IGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFsSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 278 GLMMSILAMGYPKLAFFHLLAHALFkaLLFMCAGS----MIHNLKDCQD-IRFMGSIVNFMPLTSVCFNVSSLSLCGMPF 352
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 1043378642 353 LAGFYSK 359
Cdd:CHL00049 395 LAGFFGK 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
219-364 |
1.28e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.64 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 219 TLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFH 295
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPlgiVAGIFH 323
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1043378642 296 LLAHALFKALLFMCAGSmIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
179-364 |
1.34e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 44.14 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 179 LITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYncgwFLLLIGCMTMFMAGLG 258
Cdd:MTH00070 93 LPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWG 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 259 ANFEFDLKKIIALSTLSQLGLMMSILAMGyPKLAFFHLLAHALFKALLFMcagsMIHNLKDCQDIRFMGSIVNFMPLTSV 338
Cdd:MTH00070 169 GLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSM 243
|
170 180
....*....|....*....|....*.
gi 1043378642 339 CFnVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00070 244 MM-LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
151-397 |
2.58e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 43.42 E-value: 2.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 151 ISIAWMLNFGGWNYIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 231 FSPMLDTyncgWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGyPKLAFFHLLAHALFKALLFmca 310
Cdd:MTH00200 145 LAPALNS----NILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVF--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 311 gsMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILemvclswVNCLIFFLYFFSTGLTASYS 390
Cdd:MTH00200 217 --LLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 1043378642 391 FRLFYYS 397
Cdd:MTH00200 288 LSLFFYL 294
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
191-358 |
8.03e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.33 E-value: 8.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 191 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGWF---LLLIGCMTMFMAGLGANFEFDLK 266
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDAHVYFapaLAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 267 KIIALSTLSQLGLMM----SILAMGYPKlAFFHLLAHALFKALLFMCAGSMIHNLKDCQdIRFMGSIVNFMPLTSVCFNV 342
Cdd:PRK12561 277 RRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTYERTHTLS-IPNMGGLAKVMPKTFALFTA 354
|
170
....*....|....*.
gi 1043378642 343 SSLSLCGMPFLAGFYS 358
Cdd:PRK12561 355 SSMASLALPGMSGFVS 370
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
174-364 |
9.17e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.01 E-value: 9.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 174 SFEMKLITM-LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLDTYNCGWFLL-----LI 247
Cdd:PRK07363 200 SLNTQLILLtGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaII 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 248 GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHNL--KDCQD 322
Cdd:PRK07363 278 GTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIVERKVgtRDLDV 357
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1043378642 323 IRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07363 358 LNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
144-428 |
2.56e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.68 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 144 IGDVAILISIAWMLNFGG---WNYIYYYDFISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTL 220
Cdd:MTH00226 193 IGSVLMLLCLFSLYNIHGttdYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 221 VTAGVYLLIRFS-PM--LDTYNCGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLmMSILAMGYPKL----AF 293
Cdd:MTH00226 273 LKLGGYGLVRLSwPIlpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL-VSITLVTHDIIgltgSI 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 294 FHLLAHALFKALLFMCAgSMIHNLKDCQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeMVCLSWvNC 373
Cdd:MTH00226 352 FIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI-LSSFNW-NP 428
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378642 374 LIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFD--DKGYYISFGMIGLLFVA 428
Cdd:MTH00226 429 IIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDvnRREFYITASMVFFAFLI 485
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
179-362 |
3.13e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.45 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 179 LITMLIMLAAMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSpmLDTYNCGW-----FLLLIGCMTM 252
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYP---KLAFFHLLAHALFKALLFMCAGsMIHNLKDCQDIRFMGSI 329
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGL 361
|
170 180 190
....*....|....*....|....*....|....*.
gi 1043378642 330 VN---FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLI 362
Cdd:PRK06473 362 LNperGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
170-440 |
8.80e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 38.65 E-value: 8.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 170 FISSSFEMKLITMLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspmldtyNCGWFLLLIGC 249
Cdd:MTH00160 79 MLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL-------INNNFIIIIII 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 250 MTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDCQDIRFMGSI 329
Cdd:MTH00160 152 LSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKK 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378642 330 VNFMpltsvcFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWVNCLIFFLYFFSTgLTASYSFRLFYYSMSGdNNFYSSFS 409
Cdd:MTH00160 232 IKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRISYSSLML-NYNKNKWN 303
|
250 260 270
....*....|....*....|....*....|.
gi 1043378642 410 FDDKGYYISFGMIGLLFVAVFGGSLLSWLIF 440
Cdd:MTH00160 304 LKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
9.71e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 34.33 E-value: 9.71e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1043378642 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMLGESNMNRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| |
