|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
1.58e-170 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 485.81 E-value: 1.58e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLLKGCWWLVHSLMFLCSFVFMICVYSYADLNMISYYFGIDYFSFSLILLSFWICSLMITASGSVY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 81 LSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFS 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 161 VYDYSNTLYFPLLVDFGSYYFMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 241 LGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 321 IYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1043378643 401 YSQHGSYYAGVYTCSLGYLREYHLLLLHWLPLNILCLKGEYFF 443
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-406 |
3.07e-120 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 357.90 E-value: 3.07e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLLKGCWWLVHS---LMFLCSFVFMICVYSYADLNMISYYFGIDYFSFSLILLSFWICSLMITASG 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 78 SVYLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 158 LFSVYDYSNTLYFPLL-VDFGSYYF--MFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 235 MKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 315 FCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410
....*....|..
gi 1043378643 395 TLYMYSYSQHGS 406
Cdd:MTH00014 401 SLFLYTSTQHGS 412
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-444 |
3.93e-119 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 353.76 E-value: 3.93e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 47 MISYYFGIDYFSFSLILLSFWICSLMITASGSVYLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 127 ILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDY---SNTLYFPLLVDFGSYYFMFYIFMILAFLVKMPMFLVHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSygsSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 204 LPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 284 MVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 364 IGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYAGVYTCSLGYLREYHLLLLHWLPLNILCLKGEYFF 443
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLF 414
|
.
gi 1043378643 444 V 444
Cdd:MTH00150 415 M 415
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
2.95e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 342.95 E-value: 2.95e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLL---KGCW--WLVHSLMfLCSFVFMICVYSYADLNMISYYFGIDYFSFSLILLSFWICSLMITA 75
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskpKFLWtnTTTYSLL-IALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 76 SGSVYLSSYHSN--FFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLP 153
Cdd:MTH00124 80 SQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 154 LLLVLFSVYDYSNTLYFPLLVDFGSY------YFMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 228 GYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGH 307
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFL 387
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410
....*....|....*...
gi 1043378643 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00124 400 TLITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-444 |
1.75e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 340.80 E-value: 1.75e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 2 LKYLFMTIFLIPLCLLKGCWW--LVHSLMFLCSFVFMICVYSYADLNMISYYFGIDYFSFSLILLSFWICSLMITASGSV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsfFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 80 YLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 160 SVYDYSNTLYFPLLVDFGSYYFM---FYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYlflYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 237 VISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 317 LSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1043378643 397 YMYSYSQHGSYYAGVYTCSLGYLREYHLLLLHWLPLNILCLKGEYFFV 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
2.36e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 322.64 E-value: 2.36e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLL---KGCWWLVHSLMFLCSFVFMICVY-SYADLNMISYYFGIDYFSFSLILLSFWICSLMITAS 76
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLspkKWLWTLTTTNSLIIAFLSLMWFNlPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 77 GSvYLSS---YHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLP 153
Cdd:MTH00068 81 QN-HLKNepiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 154 LLLVLFSVYDYSNTLYFPLLVDFGSYYFM------FYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 228 GYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410
....*....|....*...
gi 1043378643 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRG 417
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-406 |
9.58e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 316.15 E-value: 9.58e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLLKGCWWLVHSLMFLCSFVFMICVY-----SYADLNMISYYFGIDYFSFSLILLSFWICSLMITA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFllnnhWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 76 SGSV--YLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLP 153
Cdd:MTH00044 81 SINHlsNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 154 LLLVLFSVYDYSNTLYFPL------LVDFGSYYFMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLselnwlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 228 GYGIFRVMKVISFLGLKF-NYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIG 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIF 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420
....*....|....*....|
gi 1043378643 387 LSFFSAVYTLYMYSYSQHGS 406
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGS 420
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
2.60e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 309.90 E-value: 2.60e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLLKGCWWL-----VHSLMFlcSFVFMICVYSYADLNM-ISYYFGIDYFSFSLILLSFWICSLMIT 74
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLI--SLISLLLLNQPNDNSLnFSLLFFSDSLSTPLLILTTWLLPLMLM 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 75 ASGSVYL--SSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASL 152
Cdd:MTH00110 79 ASQHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 153 PLLLVLFSVYDYSNTLYFPL-------LVDFGSYYFMFYIFMiLAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLK 225
Cdd:MTH00110 159 PLLVALLYIQNNLGSLNFLLlqlwaqpLPNSWSNNLLWLACM-MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLK 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 226 LGGYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMI 305
Cdd:MTH00110 238 LGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 306 GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLI 385
Cdd:MTH00110 318 AHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMG 397
|
410 420
....*....|....*....|..
gi 1043378643 386 FLSFFSAVYTLYMYSYSQHGSY 407
Cdd:MTH00110 398 LNMLITALYSLYMLITTQRGKL 419
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-422 |
1.20e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 302.63 E-value: 1.20e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 3 KYLFMTIFLIP---LCLLKGCWWLVHSLMFLCSFVFMICVYSYADLNMIS--YYFGIDYFSFSLILLSFWICSLMITASG 77
Cdd:MTH00206 1 KILIPLIMLLLmtiLSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 78 SVYLSSYHSN--FFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLL 155
Cdd:MTH00206 81 NHMKNEPINRqrIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 156 LVLFSVYDYSNTLYFPLL---VDFGSYYFMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIF 232
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 233 RVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSS 312
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 313 GLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSA 392
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430
....*....|....*....|....*....|
gi 1043378643 393 VYTLYMYSYSQHGSYYAGVYTCSLGYLREY 422
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREH 430
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-405 |
6.50e-87 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 272.60 E-value: 6.50e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLLKGCWWL-----VHSLMFLCSFVFMICVYSYADLNMISYYFGIDYFSFSLILLSFWICSLMITA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 76 SGSVYLSSYHSN--FFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 154 LLLVLFSVYDYSNTL------YFPLLVDFGSYYFMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 228 GYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410
....*....|....*...
gi 1043378643 388 SFFSAVYTLYMYSYSQHG 405
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRG 418
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
1.38e-57 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 196.84 E-value: 1.38e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 48 ISYYFGIDYFSFSLILLSFWICSLMITASGSVylSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNE--IKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 128 LGWGYqPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLL------VDFGSYYFMFYIFMIlAFLVKMPMFLVH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAelaaapLPLTAQLLLFLAFFI-AFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkvisfLGL------KFNYFWLSLGLSGGVIVSFICFRQVDLKSLIA 275
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA-----LPLfpeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 276 YSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNM 355
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1043378643 356 AAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-388 |
3.55e-57 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 190.22 E-value: 3.55e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 113 YIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDF------GSYYFMFYIF 186
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnSSGLLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 187 MILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFR 266
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMINLMPSMAL 345
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1043378643 346 WWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLS 388
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
4.08e-52 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 182.71 E-value: 4.08e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 48 ISYYFGIDYFSFSLILLSFWICSLMITASGSV---YLSSYHSNFFifMVLILMIMLYCSFSSLSLlsfYIFFEASLVPTL 124
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEikkRVKFYMAALL--WLEGGVIGVFAALDLLLF---YVFFEAMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 125 LLILGWGYqPERLQAGVYLIFYTLVASLPLLLVLFSVY----DYSNTLYFPLL----VDFGSYYFMFYIFMIlAFLVKMP 196
Cdd:PRK05846 149 FLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIADLlnlpLPPGVQYWLFLAFFI-AFAVKMP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 197 MFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkvisfLGL------KFNYFWLSLGLSGGVIVSFICFRQVDL 270
Cdd:PRK05846 227 MFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-----LPLfpdashEFAPIIITLGVIAIIYGALVALAQTDI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 271 KSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLL 350
Cdd:PRK05846 302 KKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFF 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1043378643 351 SSSNMAAPPSLNLIGE-LSLLNSIMSWSSFSFLVLIFLsFFSAVYTLYMY 399
Cdd:PRK05846 382 AMASLGLPGTSGFVGEfLILLGSFQVNPVIAFIATTGL-ILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
5.00e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 176.79 E-value: 5.00e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 89 FIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTL 168
Cdd:MTH00204 114 FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 169 -YFPLLVDFGSYYFMFYIFM--ILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVIsFLGLKF 245
Cdd:MTH00204 194 dYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPL-FPAASE 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 246 NYFWLSLGLSGGVIV--SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00204 273 YFAPLIVMLSVIAVIygSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYE 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1043378643 324 RLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:MTH00204 353 RHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
1.77e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 175.88 E-value: 1.77e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 52 FGIDYFSFSLILLSFWI--CSLMITASGSVYLSSYhsnfFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 130 WGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDF-----GSYYFMFYIFMILAFLVKMPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 205 PKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLK-FNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 284 MVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 1043378643 364 IGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
89-399 |
7.03e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 173.70 E-value: 7.03e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 89 FIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTL 168
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 169 YFPLL----VDFGSYYFMFYIFMiLAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKVISFLGL 243
Cdd:MTH00217 191 DYQALcclkIEKELQYFIFLGFF-LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 244 KFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYE 323
Cdd:MTH00217 270 YFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYE 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1043378643 324 RLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSllnSIMSWSSFSFLVLIFLSF---FSAVYTLYMY 399
Cdd:MTH00217 350 RHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFL---SLLAAFEYSYIVGVLASLgmvLSAGYSIYLY 425
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
4.53e-48 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 171.28 E-value: 4.53e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 48 ISYYFGIDYFSFSLILLSFWICSLMITASGSVYLSSyhSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWESIQKR--VKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 128 LGWGyQPERLQAGVYLIFYTLVASLPLLLVLFSVYdYSNTLYFPLL------VDFGSYYFMFYIFMIlAFLVKMPMFLVH 201
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTFDLLellnlpLPFGVQTWLFLAFFI-AFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVA 280
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 281 HMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPS 360
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 1043378643 361 LNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
33-418 |
2.18e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 154.29 E-value: 2.18e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 33 FVFMICVYSYADLNMISYYFGIDYF-SFSLILLSFwicsLMITASGSVYLSSYHSNFFIFMVLILMIMLyCSFSSLSLLS 111
Cdd:MTH00094 12 FFLFLMFFSFLMFNNYSWSGLFFFFdSFVFVLLIF----MMVFILGLVLLSEKNFNLLILSNLLILICL-LFFVSSNMLM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 112 FYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDFgsyyfMFYIFMILAF 191
Cdd:MTH00094 87 LYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSW-----EMFFILSLSF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 192 LVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLglkFNYFWLSLGLSGGVIVSFICFRQVDLK 271
Cdd:MTH00094 162 MMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDSK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 272 SLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLS 351
Cdd:MTH00094 239 SLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVF 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378643 352 SSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYAGVYTCSLGY 418
Cdd:MTH00094 319 LSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
2.15e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 134.39 E-value: 2.15e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 53 GIDYFSFSLILLSFWICSLMITASGSVylsSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGY 132
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 133 QpERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPL----LVDF-GSYYFMFYIFMILAFLVKMPMFLVHLWLPKA 207
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHTWLPDA 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 208 HVEAPISGSMILAGVLLKLGGYGIFRV-MKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK12561 212 HGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 287 GGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMP-SMALwwFLLSS-SNMAAPPSLNLI 364
Cdd:PRK12561 292 LGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPkTFAL--FTASSmASLALPGMSGFV 369
|
330 340
....*....|....*....|....*....
gi 1043378643 365 GELSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:PRK12561 370 SELTVFLGITSSDVYSSTFRTITILLAAV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-403 |
6.50e-30 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 120.25 E-value: 6.50e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 52 FGIDYFSFSLILLSFWICSLMITASGSVYLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 132 YqPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDFGSYY-----FMFYIFMILAFLVKMPMFLVHLWLPK 206
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKVI--SFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSM 284
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 285 VIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLI 364
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1043378643 365 GELSLLNSIMSWSSFSFLVLIFL-SFFSAVYTLYMYSYSQ 403
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
6.56e-28 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 115.96 E-value: 6.56e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 53 GIDYFSFSLILLSFWICSLMITASGSVylsSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 133 QpERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLV----DFG-SYYFMFYIFMILAFLVKMPMFLVHLWLPKA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 208 HVEAPISGSMILAGVLLKLGGYGIFRV-MKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 287 GGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGE 366
Cdd:PRK02546 320 IGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAE 399
|
330 340
....*....|....*....|....*..
gi 1043378643 367 LSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:PRK02546 400 LMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-393 |
3.48e-26 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 110.42 E-value: 3.48e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 52 FGIDYFSFSLILLSFWICSLMITASGSVylsSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPV---TRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 132 YQpERLQAGVYLIFYTLVASLPLLLVLFSVYDYSN---TLYFPLLVDfGSYYF----MFYIFMILAFLVKMPMFLVHLWL 204
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLNFETLAN-QSYPValeiLFYIGFLIAYAVKLPIIPLHTWL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 205 PKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:CHL00011 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 284 MVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:CHL00011 315 FIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGF 394
|
330 340 350
....*....|....*....|....*....|
gi 1043378643 364 IGELSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:CHL00011 395 VAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
2.90e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 104.78 E-value: 2.90e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 48 ISYYFGIDYFSFSLILLSFWICSLMITASGSvylSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 128 LGWGYQpERLQAGVYLIFYTLVASLPLL---LVLFSVYDYSNTLYFPLLVDF--GSYYFMFYIFMILAFLVKMPMFLVHL 202
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILvsfLGLVWLSGASSFDYEPLRSHTlpLSTQLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFIC-FRQVDLKSLIAYSSVAH 281
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378643 282 MSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-401 |
4.48e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 95.33 E-value: 4.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 52 FGIDYFSFSLILLSFWICSLMITASgsVYLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 132 YQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLL----VDFGSYYFMFYiFMILAFLVKMPMFLVHLWLPKA 207
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalAENPTVVTAFG-FVLLALALKAAVFPLHTWLPRA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 208 HVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWLS----LGLSGGVIVSFICFRQVDLKSLIAYSSVAHMS 283
Cdd:PRK08375 229 YPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWllavLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 284 MVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNL 363
Cdd:PRK08375 309 YILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 1043378643 364 IGELSLLNSIMSWSSFSFLVLIFL-SFFSAVYTLYMYSY 401
Cdd:PRK08375 389 VSKWYLVVGAVEAGQWLVLAVLLAsSLLALLYFLRIWYR 427
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
20-393 |
1.02e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 93.83 E-value: 1.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 20 CWWLVHSLMFLCSFVFMICV--YSYADLNMISYYFGIDYFSFSLILLSFWICSLMITASGSVYLSSyhSNFFIFMVLILM 97
Cdd:MTH00062 7 GFFLGFLLLLLFCLLYSSGVgcCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGV--SRFFLFLSLIFS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 98 IMLYCSFSSLSLlsfYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDFG 177
Cdd:MTH00062 85 ILCFCVNNSLLF---WFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 178 SYYFMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLkFNYFWLSLGLSGG 257
Cdd:MTH00062 162 SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCCLFSVF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 258 VIVSfiCFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMI 337
Cdd:MTH00062 241 FLIT--ACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGI 318
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1043378643 338 NLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:MTH00062 319 NGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLV 374
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-394 |
6.63e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 85.92 E-value: 6.63e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 48 ISYYFGIDYFSFSLILLSfwiCSLMITASGSVYLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 128 LGWGYQpERLQAGVYLIFYTLVASLPLLLVLFSV----------YDYSNTLYFPLlvdfgSYYFMFYIFMILAFLVKMPM 197
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIvwlsgstsfdYDAISTQNLSL-----NTQLILLTGLLLGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 198 FLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRvmkvisfLGLK-FNYFWL----SLGLSGGVIV---SFICFRQVD 269
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-------FGLQlFPQTWSlvapGLAIIGTISViygALSAIAQKD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 270 LKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFL 349
Cdd:PRK07363 295 IKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSAL 374
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1043378643 350 LSSSNMAA---PPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVY 394
Cdd:PRK07363 375 LVLAGMASagiPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-398 |
1.58e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 81.56 E-value: 1.58e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 186 FMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFW-------LSLGLSGGV 258
Cdd:PRK12667 228 LALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRaalspilIILGAVSAI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 259 IVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK12667 308 IGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGR 387
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 339 LMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSwSSFSFLVLIFLsFFSAVYTLYM 398
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLE-SGFYLPALVLL-IASAISLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
184-393 |
2.88e-16 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 80.74 E-value: 2.88e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 184 YIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVIS-FLGLKF-NYFWLSLGLSGGVIVS 261
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 262 FICFRQVDLKSLIAYSSVAHMSMV-----IGGLMtmnwwGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGL 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1043378643 337 INLMPSMAlWWFLLSSSNMA-APPSLNLIGELSLLNSIMS---WSSFSFLVLIFLSFFSAV 393
Cdd:PRK06458 372 LKVSPLTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
113-341 |
3.35e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 74.65 E-value: 3.35e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 113 YIFFEASLVPTLLLILgWGYQPERLQAGVYLIFyTLVASLPLLLVLFSVYDYSNTLYFPLLVDF------GSYYFMFYIF 186
Cdd:PRK08668 124 YIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGlindtsTGFALIVFLF 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 187 MILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGL-----------KFNYFWLSLGLS 255
Cdd:PRK08668 202 LLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLFNYILAWLGNI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 256 GGVIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKG 335
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGG 361
|
....*.
gi 1043378643 336 MINLMP 341
Cdd:PRK08668 362 LIEKMP 367
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
114-387 |
3.29e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 71.69 E-value: 3.29e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 114 IFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDFGSYYFMFYIFMILAFLV 193
Cdd:PRK08667 138 FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 194 KMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSL 273
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGL 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 274 IAYSSVAHMSMVIGGLMTMNWWGCMGSLSLM-----------IGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPS 342
Cdd:PRK08667 298 LAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1043378643 343 MALWWFLLSSSNMAAPPSLNLIGELSLLNS-IMSWSSFSFLVLIFL 387
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESfFQSFSVADPLIKILL 423
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
1.03e-12 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 64.08 E-value: 1.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 1 MLKYLFMTIFLIPLCLLKGCWWL-----VHSLMFLCSFVFMICVYSYADLNMISYYFGIDYFSFSLILLSFWICSLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*....
gi 1043378643 76 SGSVYLS--SYHSNFFIFMVLILMIMLYC 102
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLIL 109
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-399 |
9.45e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 66.70 E-value: 9.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 181 FMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVI--SFLGLKFNYFWLSLGLSGGV 258
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 259 IVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFR 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1043378643 339 LMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
80-398 |
1.16e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.70 E-value: 1.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 80 YLSSYHSN---FFIFMVLILMIMLyCSFSSLSLLSFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLL 156
Cdd:PRK12646 101 YLSSRKDNlprFYFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 157 VLFSVYDYSNTLYFPLLVD-----FGSYYFMFYIFMIL--AFlVKMPMFLVHLWLPKAhVEAPISGSMIL-AGVLLKLGG 228
Cdd:PRK12646 180 GFIMLYIMTGTNNITEILGqadhiKNHGLFIPMIFMFLlgAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGI 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 229 YGIFRVMKVISfLGLKFNYFWLSLGLSGGVIVSFICFRQVDLKSLIAYSSVAH----MSMV-IGGLMTMNWWGCMGSLSL 303
Cdd:PRK12646 258 FLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYV 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 304 MI---------GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALwWFLLSSSNMAAPPSLN--LIGELSL--L 370
Cdd:PRK12646 337 FVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgfLSKEMFLdaL 415
|
330 340 350
....*....|....*....|....*....|....*
gi 1043378643 371 NSIMSWSSFSFLVLIFL-------SFFSAVYTLYM 398
Cdd:PRK12646 416 TQTGQLSQFSLISMIIIvfigviaSIFTFTYALYM 450
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-395 |
2.67e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.14 E-value: 2.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 185 IFMILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVI-----SFLGLKFNYFWLSLGLSGGVI 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 260 VSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINL 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378643 340 MPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSF-SFLVLIFLSFFSAVYT 395
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWiGLVVLLVGSGLSVIYV 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-324 |
1.10e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 63.43 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 113 YIFFEASLVPTLLLIlGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDFGSYYFMFyifMILAFL 192
Cdd:PRK07234 120 YVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFAL---IALGLL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 193 VKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWLSLGLSGgvivSFICFRQVDLKS 272
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKR 271
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1043378643 273 LIAYSSVAHMSMVIGGlmtmnwwGCMGSLsLMIGHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 272 MLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-370 |
2.36e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.21 E-value: 2.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 113 YIFFEASLVPTLLLiLGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLL------VDFGSYYFMFYIF 186
Cdd:PRK12665 137 YVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldeLPSGTRTALFAVL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 187 MIlAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVIsFLGLKFNYFWLSLGLSGGVIVSFICFR 266
Cdd:PRK12665 216 LV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPGGGLDTLLMVVALLTMVVGILGAIA 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALW 346
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVL 373
|
250 260
....*....|....*....|....
gi 1043378643 347 WFLLSSSNMAAPPSLNLIGELSLL 370
Cdd:PRK12665 374 FFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
187-362 |
9.68e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 57.59 E-value: 9.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 187 MILAFL---VKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkVISFLG---LKFNYFWLSLGLSGGVIV 260
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGapgWWWGVLVLALGAISAVLG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 261 SFICFRQVDLKSLIAYSSVAHMSMVIGGL-MTM----NWWGCMGSLSLM------IGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTIENIGIIFVGLgLAMvfiaYGMPLLAALALTaalyhlLNHALFKSLLFLGAGAVLHATGTRD 370
|
170 180 190
....*....|....*....|....*....|...
gi 1043378643 330 LLINKGMINLMPSMAlWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 371 MEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-396 |
9.49e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 54.05 E-value: 9.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 59 FSLILLSFWICSLMITASGSVYLSSYHSNFFIFMVLILMIMLYCSFSSLSLLSFYIFFEASLVPTLLLIlGWGYQPERLQ 138
Cdd:PRK06589 88 FLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 139 AGV-YLIFYTLVASLPLLLVLFSVYDYSNTLYFPLLVDFGSYYFMFYIFMILAFLVKMPMFLVHLWLPKAHVEAPISGSM 217
Cdd:PRK06589 167 GGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSAL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 218 ILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIV-----SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTM 292
Cdd:PRK06589 247 LHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAFIL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 293 NWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLL-- 370
Cdd:PRK06589 327 TPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILla 406
|
330 340
....*....|....*....|....*....
gi 1043378643 371 ---NSIMSWSSFSFLVLIFLSFFSAVYTL 396
Cdd:PRK06589 407 aseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-398 |
1.90e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.18 E-value: 1.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 113 YIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLL---VLFSVYDYSNTLYFPLLVDFGSYYF--MFYIFM 187
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLgiaLLYGQYGTLNMAYLAVKMSENPTVVakIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 188 ILAFLVKMPMFLVHLWLPKAHVEAPISGSMILagVLLKLGG-YGIFRVMkvisflglkFNYFWLSLGLS--GGVIVSFIC 264
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVL---------FSIYGPAINLAtvGWVIIILGC 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 265 FR----------QVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCM---GSLSLMIGHGLCSSGLFCLSNIIY 322
Cdd:PRK08376 296 LTmfvgvamavvQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVI 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 323 ERLGSRSLLINKGMINLMPsMALWWFLLSSSNMAAPPSLN------LIGELS-LLNSIMSWSSFSFLVLIFLSFFSAVYT 395
Cdd:PRK08376 376 YETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHT 454
|
...
gi 1043378643 396 LYM 398
Cdd:PRK08376 455 AFF 457
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-359 |
3.62e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 52.46 E-value: 3.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 187 MILAFLVKMPMFLVHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKVISFLGLKFNYFWL--SLGLSGGVIVSFIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMA 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170
....*....|....*
gi 1043378643 345 LWWFLLSSSNMAAPP 359
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
5.43e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.59 E-value: 5.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 200 VHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrvmkVISFLGLKFNYFWLSLGLSGGVIVSFI----CFRQVDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 276 YSSVAHMSMVIGGL-----------MTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMA 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 1043378643 345 LwWFLLSSSNMAAPPSLN 362
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-374 |
8.11e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.03 E-value: 8.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 188 ILAFLV------KMPMFLVHLWLPKAHVEA-PIS-----GSMILAGVLLKLGGYGIFRVMKVisflglkFNYFWLSLGLS 255
Cdd:PRK12650 209 VVAVLIavaaftKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 256 GGVIVSFICFRQVDLKSLIAYSSVAHMsmviGGLMTMNWWGCMGSLSLMI----GHGLCSSGLFCLSNIIYERLGSRSLL 331
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQL----GWIVATIGVGTPFALTAAVvhtlAHALFKSSLFMLIGVVDHQAGTRDIR 357
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1043378643 332 INKGMINLMPsMALWWFLLSSSNMAA-PPSLNLIGELSLLNSIM 374
Cdd:PRK12650 358 RLGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFL 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
113-396 |
1.66e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 43.79 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 113 YIFFEASLVPTLLLILgWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLL------VDFGSYYFMFYIF 186
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 187 MILAFLVKMPMFLVHlWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVM--------KVISFLglkfnyfwlsLGLSGG- 257
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFtllfpqerELLHPL----------LATMAAi 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 258 --VIVSFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKG 335
Cdd:PRK12663 282 tmVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGG 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1043378643 336 MINLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTL 396
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-292 |
1.61e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.97 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 113 YIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYT------LVASLPLLLVLFSVYDYSNTLYFPLLVDFGSYYFMFYIF 186
Cdd:PRK12649 137 FIFWELTSITSFMLIGYWRHRPESVYGATKSLLITaggglfMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLIT 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 187 MILAFL---VKMPMFLVHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKVISflGLKFNYFWLS-LGLSGGVIVS 261
Cdd:PRK12649 217 LILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgTGMITMVLAG 293
|
170 180 190
....*....|....*....|....*....|.
gi 1043378643 262 FICFRQVDLKSLIAYSSVAHMSMviggLMTM 292
Cdd:PRK12649 294 FLAFRQTDIKAILAYSTISQLAY----LMTM 320
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-393 |
5.67e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 39.13 E-value: 5.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 52 FGIDyFSFSLILLSFWICsLMITASGS---VYLSSY---HSNFFIFMVLILMIM--LYCSFSSLSLLSFYIFFEASLVPT 123
Cdd:PRK12647 54 LGVN-LSFLLDGLSLTFA-LLITGIGTlivLYAGGYlkgHPDLGRFYSYILLFMasMLGLVLSDNLITLFVFWELTSITS 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 124 LLLIlgwGYQPER-------LQAgvylIFYT------LVASLPLLLVLFSVYDYSNTLYFPLLVDFGSYYFMFYIFMILA 190
Cdd:PRK12647 132 FLLI---GFNHEReaarraaLQA----LLVTgggglaLLAGLILLGNVTGTYSLSELLASGDVIREHPLYLAILLLVLGG 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 191 FLVKMPMFLVHLWLPKAhVEAPI-------SGSMILAGVLLklggygifrVMKVISFLGLKFNYFWLsLGLSGG---VIV 260
Cdd:PRK12647 205 AFTKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGltmLTG 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 261 SFICFRQVDLKSLIAYSSVahmsMVIGGLMTMNWWGCMGSLS----LMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTV----SALGTLVMLLGLGSELAIKaavlFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGL 349
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1043378643 337 INLMPSMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSfLVLIFLSFFSAV 393
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWS-LILTVAAVLGNA 405
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
114-359 |
6.72e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 38.80 E-value: 6.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 114 IFFEASLVPTLLLIlGWGYQPERLQAGVYLIFYTLVASLPLLLVLFSVYDYSNTLYFPLL--VDFGSYYFMFYIFMILAF 191
Cdd:PRK06525 140 LFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALsgLHGSLKYLVFLGILFAAW 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 192 lVKMPMFLVHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKVISFLGLKFNYFWLSLGLSGGVIVSFICFRQVDL 270
Cdd:PRK06525 219 -GKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDM 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1043378643 271 KSLIAYSSVAHMSMVIGGLMTM---NWWGCMGSLSLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPSMALWW 347
Cdd:PRK06525 297 KRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGF 376
|
250
....*....|..
gi 1043378643 348 FLLSSSNMAAPP 359
Cdd:PRK06525 377 CVAALAITGVPP 388
|
|
| |
