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Conserved domains on  [gi|1197511373|ref|YP_009368049|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Lepilemur leucopus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 539.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   1 MFATNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMS 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  81 IALTMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 161 TLTTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1197511373 241 LFLGTLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 539.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   1 MFATNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMS 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  81 IALTMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 161 TLTTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1197511373 241 LFLGTLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
6-305 2.99e-105

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 309.40  E-value: 2.99e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  86 WTPLPM--PLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511373 244 GTLYKPdMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 242 GGWLGP-FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
6-299 1.02e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 281.25  E-value: 1.02e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTM 85
Cdd:COG1005    15 ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLA 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  86 WTPLPM--PLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF-TL 162
Cdd:COG1005    95 FAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLnLS 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 163 TTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLF 242
Cdd:COG1005   175 EIVEAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLF 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511373 243 LGTLYKPDMPEAYTT-----NFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   255 LGGWLGPFPILPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 539.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   1 MFATNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMS 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  81 IALTMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 161 TLTTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1197511373 241 LFLGTLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPPQM 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
4-318 1.60e-174

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 485.94  E-value: 1.60e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   4 TNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIAL 83
Cdd:MTH00111    9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  84 TMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:MTH00111   89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQ 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFL 243
Cdd:MTH00111  169 TLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFL 248
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1197511373 244 GTLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPPQM 318
Cdd:MTH00111  249 NPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
5-317 3.19e-167

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 467.56  E-value: 3.19e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   5 NLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALT 84
Cdd:MTH00071   10 NPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALI 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  85 MWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLTT 164
Cdd:MTH00071   90 IWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMN 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 165 LITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG 244
Cdd:MTH00071  170 FNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLG 249
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1197511373 245 TLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPPQ 317
Cdd:MTH00071  250 STYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
5-318 1.52e-163

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 458.30  E-value: 1.52e-163
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   5 NLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALT 84
Cdd:MTH00134   11 NPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALT 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  85 MWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLTT 164
Cdd:MTH00134   91 LWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQT 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 165 LITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG 244
Cdd:MTH00134  171 FNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLG 250
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197511373 245 TLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPPQM 318
Cdd:MTH00134  251 ASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
5-316 3.65e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 383.11  E-value: 3.65e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   5 NLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALT 84
Cdd:MTH00218    7 NLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  85 MWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLTT 164
Cdd:MTH00218   87 LWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEG 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 165 LITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG 244
Cdd:MTH00218  167 FNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLG 246
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511373 245 TLYKpdmpeayTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPP 316
Cdd:MTH00218  247 TSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
1-316 2.30e-131

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 376.62  E-value: 2.30e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   1 MFATNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMS 80
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  81 IALTMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF 160
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 161 TLTTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00040  165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1197511373 241 LFLGTLYKpdMPEAYTTNFIT---KTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPP 316
Cdd:MTH00040  245 LFLGGGSP--FNEIFPINIIIvgiKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
4-313 1.54e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 325.93  E-value: 1.54e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   4 TNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIAL 83
Cdd:MTH00195    6 IHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALAL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  84 TMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:MTH00195   86 ILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFT 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFl 243
Cdd:MTH00195  166 IMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILF- 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 244 gtlykpdMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSF 313
Cdd:MTH00195  245 -------LGGGGTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
1-311 1.64e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 310.16  E-value: 1.64e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   1 MFATNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMS 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  81 IALTMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 161 TLTTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1197511373 241 LFLGTLYKPDMpeayttnFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLM 311
Cdd:MTH00193  243 MFLGGDLLSLL-------FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
6-305 2.99e-105

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 309.40  E-value: 2.99e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  86 WTPLPM--PLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511373 244 GTLYKPdMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 242 GGWLGP-FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
7-302 1.12e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 297.94  E-value: 1.12e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   7 LLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTMW 86
Cdd:MTH00143    8 VFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLW 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  87 TPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLTTLI 166
Cdd:MTH00143   88 QLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEIS 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 167 TTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGTL 246
Cdd:MTH00143  168 ESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS 247
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1197511373 247 ykPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143  248 --SVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
1-307 3.43e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 291.55  E-value: 3.43e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   1 MFATNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMS 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  81 IALTMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 161 TLTTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNalttt 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMS----- 236
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511373 241 LFLGTLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00225  237 MLTSILFFGGFFVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
6-316 2.00e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 282.77  E-value: 2.00e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTM 85
Cdd:MTH00054    8 ILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  86 WTPLPM--PLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:MTH00054   88 WGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLT 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFL 243
Cdd:MTH00054  168 EIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFL 247
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197511373 244 GTLYKPDMPEAYTTNFI---TKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPP 316
Cdd:MTH00054  248 GGWLVISGPTSYFSNFVwfgIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
6-299 1.02e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 281.25  E-value: 1.02e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTM 85
Cdd:COG1005    15 ALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLA 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  86 WTPLPM--PLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSF-TL 162
Cdd:COG1005    95 FAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLnLS 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 163 TTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLF 242
Cdd:COG1005   175 EIVEAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLF 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511373 243 LGTLYKPDMPEAYTT-----NFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   255 LGGWLGPFPILPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
6-316 4.56e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 279.31  E-value: 4.56e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTM 85
Cdd:MTH00216   12 ILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIV 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  86 WTPLPMP--LPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:MTH00216   92 WGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSIT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TLITT-QQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLF 242
Cdd:MTH00216  172 EIVLAqNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILF 251
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1197511373 243 LGTLYKPDMP-EAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLMSFIPP 316
Cdd:MTH00216  252 LGGWLSPIKYfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
7-303 7.26e-87

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 263.21  E-value: 7.26e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   7 LLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTMW 86
Cdd:PRK06076   17 VVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAW 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  87 TPLPM--PLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLTT 164
Cdd:PRK06076   97 AVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSD 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 165 LITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFL- 243
Cdd:PRK06076  177 IVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLg 256
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511373 244 --GTLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076  257 gwLPPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
2-311 2.51e-85

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 259.33  E-value: 2.51e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   2 FATNLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSI 81
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  82 ALTMWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFt 161
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTF- 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 162 LTTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNaltttL 241
Cdd:MTH00010  164 SFSKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMS-----L 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511373 242 FLGTLYKPDMPEAYTTN--FITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPVLM 311
Cdd:MTH00010  239 FTSVFFTSFIPSIFISDlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
6-316 5.34e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 244.16  E-value: 5.34e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTM 85
Cdd:MTH00029   13 LLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILA 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  86 WTPLPMP--LPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:MTH00029   93 WAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNIS 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMN-------- 235
Cdd:MTH00029  173 EIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMScmmtiffl 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 236 --------ALTTTLFLGTLYKPDMPEAYTTNFITKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00029  253 ggwlspldGIPTPPEAFSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGI 332

                  ....*....
gi 1197511373 308 PVLMSFIPP 316
Cdd:MTH00029  333 LIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
5-307 4.67e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 193.58  E-value: 4.67e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   5 NLLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALT 84
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  85 MWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLTT 164
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 165 LITtqqyLWLIVpswpLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFlg 244
Cdd:MTH00090  161 SFS----LSLFV----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF-- 230
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1197511373 245 tlykpdmpeaYTTNFITKTLLLtSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00090  231 ----------FKFSFLMLFLIF-SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
8-298 1.11e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 153.93  E-value: 1.11e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   8 LLIIPVIaaMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLAMSIALTMWT 87
Cdd:MTH00058   11 LLIILLL--VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCF 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  88 PLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLTTLIT 167
Cdd:MTH00058   89 IYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYY 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 168 TQQYLWLIVPswPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEY---------TNIIMMNALT 238
Cdd:MTH00058  169 SGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYliififswlGSVLFFGGGF 246
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 239 TTLflgtlykpdmpeayttnFITKTLLltsLFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058  247 VSI-----------------MLLFHLL---FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
6-298 5.53e-37

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 135.46  E-value: 5.53e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   6 LLLLIIPVIAAMAFFTLIERKILGYMQLRKGPNIVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLA-MSIALT 84
Cdd:CHL00032   33 ILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAvISILLS 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  85 -MWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTLT 163
Cdd:CHL00032  113 yLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTV 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 164 TlittqqylwlIVP--------SWPL------TMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYT 229
Cdd:CHL00032  193 D----------IVEaqskygfwGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 230 NiIMMNALTTTLFLGTLYKPDMPEAYTTNF---------------ITKTLLLTSLFLWI----RASYPRFRYDQLMHLLW 290
Cdd:CHL00032  263 N-LLVSSLFVTVLYLGGWNLSIPYIFIPELfeinktggvfgttigIFITLAKTYLFLFIsittRWTLPRLRMDQLLNLGW 341

                  ....*...
gi 1197511373 291 KNFLPLTL 298
Cdd:CHL00032  342 KFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-305 9.72e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 95.64  E-value: 9.72e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373   7 LLLIIPVIAAMAFFTLIERKILGYMQLRKGPnivgphGLLQPFADAVKLYIKEPLRPlASSTLLYITAP--TLAMSIALT 84
Cdd:COG0650     8 LLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPyvALAAMLLAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373  85 MWTPLPMPLPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLALILLSVLLMNGSFTL-- 162
Cdd:COG0650    81 LLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLsd 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511373 163 -TTLITTQQYLWLIVPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTL 241
Cdd:COG0650   161 iVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNL 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197511373 242 FLGTLYKPDMPEAYTTNFItKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:COG0650   241 FLPWGIALTLLLALLLFLL-KLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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