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Conserved domains on  [gi|1197511464|ref|YP_009368147|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Lepilemur betsileo]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.63e-69

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 202.86  E-value: 3.63e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197511464  81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.63e-69

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 202.86  E-value: 3.63e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197511464  81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.21e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 104.04  E-value: 2.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  18 VMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLT-LTMALTVIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1197511464  97 ILAAGLTYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 12-113 2.42e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 84.02  E-value: 2.42e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  12 LLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLTLTMA 91
Cdd:COG0838    17 GLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFGLIE 94

                          90       100
                  ....*....|....*....|...
gi 1197511464  92 LTV-ISILAAGLTYEWLQKGLEW 113
Cdd:COG0838    95 MLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.63e-69

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 202.86  E-value: 3.63e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197511464  81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 5.06e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 154.31  E-value: 5.06e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMT-DTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAT 79
Cdd:MTH00136    1 MNLITTILTiTIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1197511464  80 QTNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-115 4.92e-48

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 149.37  E-value: 4.92e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   5 LTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNL 84
Cdd:MTH00069    4 LMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTP 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1197511464  85 KLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00069   84 TNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 9.06e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 140.79  E-value: 9.06e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1197511464  81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.24e-36

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 120.47  E-value: 1.24e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197511464  81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 12-113 3.92e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 113.84  E-value: 3.92e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  12 LLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNlkLTLTMA 91
Cdd:MTH00203   13 LLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS--LSLLLA 90

                          90       100
                  ....*....|....*....|..
gi 1197511464  92 LTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00203   91 FLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.21e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 104.04  E-value: 2.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  18 VMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLT-LTMALTVIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1197511464  97 ILAAGLTYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-113 5.48e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 96.00  E-value: 5.48e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   5 LTLMTDTLLVMILVMVAFWL--PQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTN 82
Cdd:MTH00161    3 LIILLIILLISIILMILASLlsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1197511464  83 NLKLTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00161   83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 1.74e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 94.54  E-value: 1.74e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWLPQLNVY-TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAT 79
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1197511464  80 QTNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 7-113 4.76e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.81  E-value: 4.76e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   7 LMTDTLLVMILVMVAFWLPQLNVYT-EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLK 85
Cdd:MTH00202    8 SILSILISSLLFLVSWMLSFRSLMDrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSK 87

                          90       100
                  ....*....|....*....|....*...
gi 1197511464  86 LTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00202   88 GGLLGGTIFLLILIGGLIHEWKEGSLDW 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 12-113 2.42e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 84.02  E-value: 2.42e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  12 LLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLTLTMA 91
Cdd:COG0838    17 GLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFGLIE 94

                          90       100
                  ....*....|....*....|...
gi 1197511464  92 LTV-ISILAAGLTYEWLQKGLEW 113
Cdd:COG0838    95 MLVfIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 31-114 2.51e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 84.38  E-value: 2.51e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  31 TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLKLTLTMALTVIsILAAGLTYEWLQKG 110
Cdd:MTH00055   36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGG 114


                  ....
gi 1197511464 111 LEWE 114
Cdd:MTH00055  115 LEWE 118
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 6.13e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 83.37  E-value: 6.13e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWL--PQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1197511464  79 TQTNNLKLTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-114 4.23e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.75  E-value: 4.23e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLT-LTMALTVISILAAGLTYEWLQKG 110
Cdd:PRK06602   40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLgFVEAMIFILVLLVGLVYLWRKGA 117


                  ....
gi 1197511464 111 LEWE 114
Cdd:PRK06602  118 LDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-114 1.09e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 77.41  E-value: 1.09e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   1 MNFPLTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQ 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1197511464  81 TNNLKL--TLTMALTVIsILAAGLTYEWLQKGLEWE 114
Cdd:MTH00018   79 YNQIAPfgFWTMVGFLF-ILTLGLIYEWIKGGLEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 13-114 3.40e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 73.81  E-value: 3.40e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  13 LVMILVMVAFWLPQLNVY-----TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL- 86
Cdd:MTH00030   18 IILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLf 95

                          90       100
                  ....*....|....*....|....*...
gi 1197511464  87 TLTMALTVISILAAGLTYEWLQKGLEWE 114
Cdd:MTH00030   96 SFWIVYTFLIVLAIGLAYEWIKGGLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 12-113 1.40e-12

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 59.23  E-value: 1.40e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  12 LLVMILV-MVAFWLPQL----NVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL 86
Cdd:CHL00022   14 LIISSLIpILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                          90       100
                  ....*....|....*....|....*...
gi 1197511464  87 TLTM-ALTVISILAAGLTYEWLQKGLEW 113
Cdd:CHL00022   92 SAFIeALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 1.44e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.91  E-value: 1.44e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  33 KYKPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKL--TLTMALTVISILAAgLTYEWLQ 108
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfgLVEMALFMLTVFVA-YAYVWRR 113


                  ....*.
gi 1197511464 109 KGLEWE 114
Cdd:PRK07928  114 GGLEWD 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-113 3.10e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.51  E-value: 3.10e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464  32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKL-TLTMALTVISILAAGLTYEWLQKG 110
Cdd:PRK07756   41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLfALIEMLIFVVMLLVGLAYAWKKKV 118


                  ...
gi 1197511464 111 LEW 113
Cdd:PRK07756  119 LQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 12-73 1.95e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 45.66  E-value: 1.95e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511464  12 LLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLL 73
Cdd:MTH00092   13 LLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-114 7.44e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.96  E-value: 7.44e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511464   3 FPLTLMTDTLLVMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWATQTN 82
Cdd:PRK08489   17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFK 93

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1197511464  83 NLKL-TLTMALTVISILAAGLTYEWLQKGLEWE 114
Cdd:PRK08489   94 LLGLfGLIEMLLFIVLLTIGFIYAWKKGALEWQ 126
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 2.65e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.65e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1197511464  34 YKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060   38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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