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Conserved domains on  [gi|1197511485|ref|YP_009368179|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Lepilemur grewcockorum]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 584.28  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485   1 MFVANLLLLIIPIIVAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALS 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  81 IALTMWTPLPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 161 TLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511485 241 LFLGASYKSDMPETYTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 584.28  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485   1 MFVANLLLLIIPIIVAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALS 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  81 IALTMWTPLPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 161 TLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511485 241 LFLGASYKSDMPETYTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
NADHdh pfam00146
NADH dehydrogenase;
15-305 5.09e-121

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 349.46  E-value: 5.09e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:pfam00146  11 LAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFgpG 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:pfam00146  91 LVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAsYKSDMP 252
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGG-WLGPFP 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1197511485 253 ETYTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 250 LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 15-299 1.18e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 324.39  E-value: 1.18e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:COG1005    24 LLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpG 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQE-Y 171
Cdd:COG1005   104 LVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgG 183

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 172 LWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAsYKSDM 251
Cdd:COG1005   184 LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG-WLGPF 262

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1197511485 252 PETYTTN------FTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   263 PILPLGGlpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 584.28  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485   1 MFVANLLLLIIPIIVAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALS 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  81 IALTMWTPLPMPFPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 161 TLSTLITTQEYLWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511485 241 LFLGASYKSDMPETYTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 15-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 535.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00111   20 IAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFP 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00111  100 LADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMPET 254
Cdd:MTH00111  180 IFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPEL 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1197511485 255 YTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00111  260 FTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQ 322
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 502.61  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00071   21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLI 175
Cdd:MTH00071  101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 176 IPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMPETY 255
Cdd:MTH00071  181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511485 256 TTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00071  261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-317 2.18e-178

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 495.67  E-value: 2.18e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00134   22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLI 175
Cdd:MTH00134  102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 176 IPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMPETY 255
Cdd:MTH00134  182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511485 256 TTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPPQ 317
Cdd:MTH00134  262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQ 323
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 15-316 8.70e-146

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 412.77  E-value: 8.70e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00218   17 LAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFS 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00218   97 LINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKsdmpet 254
Cdd:MTH00218  177 LIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------ 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511485 255 yTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00218  251 -TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 5.43e-143

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 406.28  E-value: 5.43e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00040   20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLI 175
Cdd:MTH00040  100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 176 IPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASykSDMPETY 255
Cdd:MTH00040  180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGG--SPFNEIF 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197511485 256 TTN---FTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00040  258 PINiiiVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 15-313 2.05e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 350.97  E-value: 2.05e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00195   17 LAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFG 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00195   97 FSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWV 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASyksdmpet 254
Cdd:MTH00195  177 ILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-------- 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1197511485 255 YTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSY 313
Cdd:MTH00195  249 GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
15-305 5.09e-121

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 349.46  E-value: 5.09e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:pfam00146  11 LAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFgpG 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:pfam00146  91 LVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAsYKSDMP 252
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGG-WLGPFP 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1197511485 253 ETYTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 250 LPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 15-311 2.00e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 345.60  E-value: 2.00e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00193   17 VSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFN 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00193   97 LISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWF 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMpet 254
Cdd:MTH00193  177 IFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL--- 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511485 255 yttnFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILM 311
Cdd:MTH00193  254 ----FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 15-302 1.21e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 341.08  E-value: 1.21e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00143   16 LAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFS 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00143   96 SSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWL 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASykSDMPET 254
Cdd:MTH00143  176 GFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS--SVLFLL 253

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1197511485 255 YTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143  254 GGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 15-307 6.83e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 323.91  E-value: 6.83e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00225   16 LSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFS 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWL 174
Cdd:MTH00225   96 IYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWF 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYksdmpET 254
Cdd:MTH00225  176 MFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFF-----VT 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1197511485 255 YTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00225  251 IDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 15-299 1.18e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 324.39  E-value: 1.18e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:COG1005    24 LLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpG 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQE-Y 171
Cdd:COG1005   104 LVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgG 183

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 172 LWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGAsYKSDM 251
Cdd:COG1005   184 LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGG-WLGPF 262

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1197511485 252 PETYTTN------FTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005   263 PILPLGGlpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 15-316 2.72e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 315.51  E-value: 2.72e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:MTH00054   17 ISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYgeG 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:MTH00054   97 VVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNI 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMP 252
Cdd:MTH00054  177 WFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGP 256

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511485 253 ETYTTN---FTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00054  257 TSYFSNfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 15-316 2.18e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 308.20  E-value: 2.18e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMP-- 92
Cdd:MTH00216   21 IAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYErg 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQ-EY 171
Cdd:MTH00216  101 VLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQnNG 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 172 LWLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGaSYKSDM 251
Cdd:MTH00216  181 IWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLG-GWLSPI 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511485 252 PETYTTN--FTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00216  260 KYFKGGAgwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
15-303 1.61e-103

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 305.96  E-value: 1.61e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPM--P 92
Cdd:PRK06076   25 LCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpE 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:PRK06076  105 LVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLS 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG---ASYKS 249
Cdd:PRK06076  185 WNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGgwlPPFPL 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1197511485 250 DMPETYTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076  265 GGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 15-311 1.18e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 282.82  E-value: 1.18e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFP 94
Cdd:MTH00010   18 LAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  95 LINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQeYLWL 174
Cdd:MTH00010   98 SFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSWI 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 175 IIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMPET 254
Cdd:MTH00010  177 LLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSIFISDL 256

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511485 255 YttnFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILM 311
Cdd:MTH00010  257 M---LILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 15-316 2.88e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 260.33  E-value: 2.88e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  15 VAMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMP-- 92
Cdd:MTH00029   22 LSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDqg 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  93 FPLINLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYL 172
Cdd:MTH00029  102 VFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSV 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 173 WLIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLG-------- 244
Cdd:MTH00029  182 WLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGgwlspldg 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 245 --------ASYKSDMPETYTTNFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILMSYIPP 316
Cdd:MTH00029  262 iptppeafSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-307 1.40e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 210.14  E-value: 1.40e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  16 AMAFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPL 95
Cdd:MTH00090   12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  96 INLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLStlitTQEYLWLI 175
Cdd:MTH00090   92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV----SSFSLSLF 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 176 IpswpLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYksdmpety 255
Cdd:MTH00090  168 V----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSF-------- 235

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1197511485 256 ttnftAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00090  236 -----LMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-298 6.34e-51

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 170.10  E-value: 6.34e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  18 AFFTLIERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLALSIALTMWTPLPMPFPLIN 97
Cdd:MTH00058   19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  98 LNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQEYLWLIIP 177
Cdd:MTH00058   99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 178 swPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMpetytt 257
Cdd:MTH00058  179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIM------ 250

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1197511485 258 nftakTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058  251 -----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 23-298 2.15e-49

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 168.21  E-value: 2.15e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  23 IERKILGYMQLRKGPNTVGPHGLLQPFADAVKLYIKEPLRPLASSTLLYITAPTLA-LSIALTMwtpLPMPFP----LIN 97
Cdd:CHL00032   50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAvISILLSY---LVIPFGyhlvLAD 126

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  98 LNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSftLSTL-ITTQEYLWLII 176
Cdd:CHL00032  127 LSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNS--LSTVdIVEAQSKYGFW 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 177 pSWPL------TMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKS- 249
Cdd:CHL00032  205 -GWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSi 283

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197511485 250 ---DMPETYTTNFTAK----------TLLLTSLFLWI----RASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032  284 pyiFIPELFEINKTGGvfgttigifiTLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-305 2.25e-33

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 124.53  E-value: 2.25e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  19 FFTLIERKILGYMQLRKGPntvgphGLLQPFADAVKLYIKEPLRPlASSTLLYITAPTLALSIALT--MWTPLPMPFPLI 96
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVALAAMLLaaLLVPVLTTGPPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485  97 NLNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEITLAIILLSVLLMSGSFTLSTLITTQE---YLW 173
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511485 174 LIIPSWPLTMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTTTLFLGASYKSDMPE 253
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLLL 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1197511485 254 TYTTnFTAKTLLLTSLFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:COG0650   253 ALLL-FLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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