|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 742.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSANPMVWINITLHSLTISLVSLFLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 81 QHHLTKESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 161 LVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 241 YGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1197511592 401 LITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHILPLLLLTLNPKILMGQTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 609.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSANPMVWINITLHSLTISLVSLFLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 81 QHHLTKESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 161 LVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 241 YGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511592 401 LITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHILPLLLLTLNPKILMGQ 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 568.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSANPMVWINITLHSLTISLVSLFLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 81 QHHLTKESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 161 LVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 241 YGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1197511592 401 LITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHILPLLLLTLNPKILMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
5.17e-172 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 491.01 E-value: 5.17e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSANPMVWINITLHSLTISLVSLFLFKQ-ADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNlSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 80 SQHHLTKESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 160 LLVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 240 GYGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 320 GLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511592 400 MLITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHILPLLLLTLNPKILMG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.01e-160 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 460.95 E-value: 2.01e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 3 KIIVPTAMLLPVTWYSANPMVWINITLHSLTISLVSLFLFK-QADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKwSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 82 HHLTKESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 162 VALSHIQNSMGTLSLFMMTYwlqELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 242 GMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 322 TSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1197511592 402 ITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHILPLLLLTLNPKIL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.99e-144 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 419.77 E-value: 3.99e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSANPMVWINITLHSLTISLVSLFLFkQADTNS--NNFSLTFFSDPLSSPLLILTTWLFPLTIM 78
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLL-NNHWSSswHNLSLSLATDSLSSPLIILSCWLAPLSLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 79 ASQHHLTKESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSL 158
Cdd:MTH00044 80 ASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 159 PLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKL 238
Cdd:MTH00044 160 PLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 239 GGYGMVRIIMILN-PLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMI 317
Cdd:MTH00044 240 GGYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMI 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 318 AHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTG 397
Cdd:MTH00044 320 AHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1197511592 398 LNMLITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHILPLLLLTLNPKILM 455
Cdd:MTH00044 400 LATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
1.30e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 346.37 E-value: 1.30e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSanpMVWINITLHSLTISLVSLFLFKQaDTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLK---NSWWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 81 QhhLTKESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00163 77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 161 LVALSHIQNSMGTLSLFMMTYwlqelpNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 241 YGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1197511592 401 LITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHI 441
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHW 429
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-441 |
1.48e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 337.58 E-value: 1.48e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 37 VSLFLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESWERKkhFLSTLISLQLFLIMTFAATELI 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSS--FSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 117 MFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWsnyLLW 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 197 TACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 277 LRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMS 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 357 TWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTL 436
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
....*
gi 1197511592 437 MSMHI 441
Cdd:MTH00150 396 LLLHW 400
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
22-455 |
3.09e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 322.70 E-value: 3.09e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 22 MVWINITLHSLTISLVSLFLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESweRKKHFLSTLIS 101
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK--NSKLFTVSVIM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 102 LQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTY 181
Cdd:MTH00205 97 LLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 182 WLQelpNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPF 261
Cdd:MTH00205 177 LNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 262 LMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRT 341
Cdd:MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 342 MLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSY 421
Cdd:MTH00205 334 MLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSS 413
|
410 420 430
....*....|....*....|....*....|....
gi 1197511592 422 HTQNFNPSLTRENTLMSMHILPLLLLTLNPKILM 455
Cdd:MTH00205 414 QISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
6.43e-105 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 319.38 E-value: 6.43e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSaNPMVWINITLHSLTISLVSLFLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIK-YPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 81 QHHLTKESWErkKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 161 LVALSHIQNSMGTLSLFMMTYWLqelPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 241 YGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1197511592 401 LITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENTLMSMHILPLLLLTLNPKIL 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
36-411 |
7.38e-76 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 245.38 E-value: 7.38e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 36 LVSLFLFKQADTNSNNFSLTFFS--------------DPLSSPLLILTTWLFPLTIMASQHHLTKesweRKKHFLSTLIS 101
Cdd:COG1008 44 LLSLYLLAGFDPGTGGFQFVESYpwipslgisyhlgvDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 102 LQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTY 181
Cdd:COG1008 120 LEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAEL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 182 WLQELPNSWSnYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPL-TKFMAYP 260
Cdd:COG1008 199 AAAPLPLTAQ-LLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 261 FLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSR 340
Cdd:COG1008 278 LAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTR 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1197511592 341 TMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYML 411
Cdd:COG1008 358 DIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
36-410 |
1.08e-70 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 232.02 E-value: 1.08e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 36 LVSLFLFKQADTNSNNFSLTFFS--------------DPLSSPLLILTTWLFPLTIMASQHhltkESWERKKHFLSTLIS 101
Cdd:PRK05846 44 LLSLVLWIGFDSSNAGFQFVEKHpwiprfgisyhlgvDGISLLLVVLTALLTPLAVLASWE----EIKKRVKFYMAALLW 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 102 LQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGnQTERLNAGLYFLFYTLAGSLPLLVAL----SHIQNSMGTLSLf 177
Cdd:PRK05846 120 LEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLLGSLLMLVAIiylvVVYYNATGTFDI- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 178 mmTYWLQ-ELPNSWSnYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPL-TK 255
Cdd:PRK05846 198 --ADLLNlPLPPGVQ-YWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSH 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 256 FMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYE 335
Cdd:PRK05846 275 EFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYD 354
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1197511592 336 RIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYM 410
Cdd:PRK05846 355 RLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
31-420 |
5.57e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 229.83 E-value: 5.57e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 31 SLTISLVSLFLFKQADTNSNNFSLTFFS--------------DPLSSPLLILTTWLFPLTIMASQHHLTKesweRKKHFL 96
Cdd:TIGR01972 34 ALATLLLSLLLLFQFDPTGSGFQFTEDIpwipalgisyhlgvDGISLLLVLLTALLTLLAILASWESIQK----RVKEFY 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 97 STLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTeRLNAGLYFLFYTLAGSLPLLVALshIQNSMGTLSL 176
Cdd:TIGR01972 110 ALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAI--LGLYFLGGGT 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 177 FMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNP-LTK 255
Cdd:TIGR01972 187 FDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 256 FMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYE 335
Cdd:TIGR01972 267 YFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYE 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 336 RIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQ 415
Cdd:TIGR01972 347 RAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVF 426
|
....*
gi 1197511592 416 RGKPS 420
Cdd:TIGR01972 427 FGELS 431
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-432 |
1.07e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 224.17 E-value: 1.07e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 53 SLTFFSDPLSSPLLILTTWLFPLTIMASQH---HLTKEswerkkhFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPT 129
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 130 LIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTywLQELPNSWSNYLLwTACIMAFMVKMPL 209
Cdd:MTH00204 149 FLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL--NIKLPLSIQKWLL-VGFFLSLAVKIPQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 210 YGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPF-LMMCLWGMIMTSLICLRQTDLKSLIAY 288
Cdd:MTH00204 226 IPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 289 SSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLA 368
Cdd:MTH00204 306 SSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMG 385
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197511592 369 LPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSYHTQnFNPSLTR 432
Cdd:MTH00204 386 FPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLL-FSRDLNR 448
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
53-420 |
1.32e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 221.08 E-value: 1.32e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 53 SLTFFSDPLSSPLLILTTWLFPLTIMASQH---HLTKEswerkkhFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPT 129
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPM 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 130 LIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSlfMMTYWLQELPNSWsNYLLWTACIMAFMVKMPL 209
Cdd:MTH00217 146 FLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD--YQALCCLKIEKEL-QYFIFLGFFLSLAIKIPK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 210 YGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAY 288
Cdd:MTH00217 223 IPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 289 SSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLA 368
Cdd:MTH00217 303 SSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANAS 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1197511592 369 LPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPS 420
Cdd:MTH00217 383 IPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPS 434
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.07e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.94 E-value: 1.07e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 112 ATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 192 NYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 272 TSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANS-NYERIHSRTMLLARGLQA 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1197511592 351 LLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-420 |
4.74e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 207.08 E-value: 4.74e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 54 LTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESwerkKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIII 133
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKYLT----KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 134 TRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGT---LSLFMMTYWLQELPNSWsnylLWTACIMAFMVKMPLY 210
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIF 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 211 GLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYS 289
Cdd:MTH00226 248 PFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 290 SVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLAL 369
Cdd:MTH00226 328 SVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1197511592 370 PPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPS 420
Cdd:MTH00226 408 PPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPG 458
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-441 |
1.88e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 162.77 E-value: 1.88e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 102 LQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHiqnsmgtlSLFMMTY 181
Cdd:MTH00094 71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 182 WLQELPNSWSNYLLwtaCIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRiimILNPLTKFMAYPF 261
Cdd:MTH00094 143 CYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 262 LMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRT 341
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 342 MLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSY 421
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFS 376
|
330 340
....*....|....*....|
gi 1197511592 422 HTQNFNPSLTRENTLMSMHI 441
Cdd:MTH00094 377 NFNNFNVGLSLPLVFMMFNM 396
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-387 |
8.28e-41 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 151.07 E-value: 8.28e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVP--TAMLLPVTWYSANPMVWINItLHSLTISLVSLFLFKQADTN----------SNNFSLTFFSDPLSSPLLIL 68
Cdd:COG0651 6 ILPVLLPllAAALLLLLGRRRRLQRALSL-LASLALLALALALLLQVLAGgplvyalggwPAPFGIVLVADRLSALFLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 69 TTWLFPLTIMASQHHLtkeSWERKKHFLSTLISLQLF-LIMTFAATELIMFYTLFESTLIPTLIIITRWGNQtERLNAGL 147
Cdd:COG0651 85 TALVALAVLLYSIGYM---RHERRGRRFYPLFLLLLAgMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 148 YFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSnYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAG 227
Cdd:COG0651 161 KYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL-LAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 228 SMILAAILLKLGGYGMVRIIMILNP--LTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQT 305
Cdd:COG0651 240 SALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGT 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 306 PWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAA 385
Cdd:COG0651 320 PLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA 399
|
..
gi 1197511592 386 FS 387
Cdd:COG0651 400 LE 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
1.79e-40 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 151.34 E-value: 1.79e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 59 DPLSSPLLILTTWLFPLTIMASqhhltkesWE---RKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITR 135
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS--------WKvtrKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 136 WGNQtERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSnYLLWTACIMAFMVKMPLYGLHMW 215
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTW 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 216 LPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK12561 208 LPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILgVVNIIYGALNAFAQDNVKRRLAYSSVSHM 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 295 ALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSIN 374
Cdd:PRK12561 288 GFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSG 367
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1197511592 375 LIGELLV-----TMAAFSWS--NTTIILTGLNMLITATYSLYML 411
Cdd:PRK12561 368 FVSELTVflgitSSDVYSSTfrTITILLAAVGLILTPIYLLSML 411
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
4.46e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 139.06 E-value: 4.46e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 59 DPLSSPLLILTTWLFPLTIMASQhhltkESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 139 QtERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSwSNYLLWTACIMAFMVKMPLYGLHMWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 219 AHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLmmCLWGMIMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWL--ATWAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 296 LVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGL---QALLPLMSTWWLLASLNNLALPPS 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 1197511592 373 INLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYML 411
Cdd:PRK06473 389 VGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
3.40e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 134.45 E-value: 3.40e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 58 SDPLSSPLLILTTWLFPLTIMASqhhltkesWE---RKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIIT 134
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA--------WPvtfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 135 RWGNQtERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSNyLLWTACIMAFMVKMPLYGLHM 214
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLgVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 294 MALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSI 373
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMS 394
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1197511592 374 NLIGELLV-----TMAAFSWSNTTII--LTGLNMLITATYSLYML 411
Cdd:PRK02546 395 GFVAELMVfvgfaTSDAYTLPFRVVVvfLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
59-411 |
2.08e-33 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 131.61 E-value: 2.08e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 59 DPLSSPLLILTTWLFPLTIMASQHhLTKESweRKKHFLS-TLISLQlflIMTFAATELIMFYTLFESTLIPTLIIITRWG 137
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAWP-VTRNS--RLFYFLMlAMYSGQ---IGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 138 NQtERLNAGLYFLFYTLAGSLPLLVALShiqnSMGTLSLFMMTYWLQELPNSwsNY------LLWTACIMAFMVKMPLYG 211
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVL----GMGLYGSNEPTLNFETLANQ--SYpvaleiLFYIGFLIAYAVKLPIIP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 212 LHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSS 290
Cdd:CHL00011 230 LHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVgAIQIIYAASTSLGQRNLKKRIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 291 VSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIhsRTMLLAR--GLQALLPLMSTWWLLASLNNLA 368
Cdd:CHL00011 310 VSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLA 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1197511592 369 LPPSINLIGELLV-----TMAAFSWSNTTII--LTGLNMLITATYSLYML 411
Cdd:CHL00011 388 LPGMSGFVAELIVffgiiTSQKYLLMPKILItfVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-435 |
4.94e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.82 E-value: 4.94e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 59 DPLSSPLLILTTWLFPLTIMASQhhltkESWERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 139 QtERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSwSNYLLWTACIMAFMVKMPLYGLHMWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 219 AHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLmmCLWGMIMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGL--AIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 296 LVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQAL---LPLMSTWWLLASLNNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1197511592 373 INLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSYHTQNFNPSLTRENT 435
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKI 451
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-387 |
6.96e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 98.03 E-value: 6.96e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 53 SLTFFSDPLSSPLLILTTWLFPLTIMASQHhlTKESWERKkhFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLII 132
Cdd:PRK08375 70 GIELRADSLSALFLLVTSILAIAALLYAIG--YGEHRQTR--FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 133 ITRWGNQtERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPnswsnyLLWTA---CIMAFMVKMPL 209
Cdd:PRK08375 146 VAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENP------TVVTAfgfVLLALALKAAV 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 210 YGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKF----MAYPFLMMCLWGMIMTSLICLRQTDLKSL 285
Cdd:PRK08375 219 FPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRV 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 286 IAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLN 365
Cdd:PRK08375 299 LAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLS 378
|
330 340
....*....|....*....|..
gi 1197511592 366 NLALPPSINLIGELLVTMAAFS 387
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVVGAVE 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-408 |
2.45e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 96.58 E-value: 2.45e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 27 ITLHSLTISLVSLF----LFKQADTNSN-----------NFSLTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESweR 91
Cdd:PRK12667 34 QKIYALLVSLITLIlsilLFIQVYSSNKpivylfggwpaPIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHES--G 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 92 KKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSM 171
Cdd:PRK12667 112 PEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 172 GTL-----SLFMMTYWLQELPNSWSNYLLWTACIMA-----FMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:PRK12667 192 GTLnmadlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAY 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 242 GMVRIIMI-------LNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATT 314
Cdd:PRK12667 272 AIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALF 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 315 LMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSnttII 394
Cdd:PRK12667 352 HIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG---FY 428
|
410
....*....|....
gi 1197511592 395 LTGLNMLITATYSL 408
Cdd:PRK12667 429 LPALVLLIASAISL 442
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
3.49e-21 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 88.35 E-value: 3.49e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 1 MLKIIVPTAMLLPVTWYSANPMVWINITLHSLTISLVSLFLFKQADTNS-NNFSLTFFSDPLSSPLLILTTWLFPLTIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSwSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1197511592 80 SQHHLTKESWERKKHFLSTLISLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-398 |
1.70e-16 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 81.51 E-value: 1.70e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 206 KMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMIL--NPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 284 SLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190
....*....|....*....|....*....|....*...
gi 1197511592 364 LNNLALPPSINLIGELLVTMAAFS---WSNTTIILTGL 398
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLL 424
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
9.01e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 79.77 E-value: 9.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 52 FSLTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESWERKKHFLSTLISLQLF-LIMTFAATELIMFYTLFESTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 131 IIITRWGNQTERLNAGLYFLFYTLAGSLPLLValshiqnsmGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFM---VKM 207
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLML---------GIIVLFIQTGSFELSPLGASAGILSLVFLLLFLgfgIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 208 PLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILnpLTKFMAYPFLMMCLwGMIMTSL---ICLRQTDLKS 284
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDV--LSPELWWGVLILLA-GSISALLgviYALKEHDLKG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 285 LIAYSSVSHMALVIMAILIQTPWSLMGATTLM-----------IAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLP 353
Cdd:PRK08667 297 LLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMP 376
|
330 340 350
....*....|....*....|....*....|...
gi 1197511592 354 LMSTWWLLASLNNLALPPSINLIGELLVTMAAF 386
Cdd:PRK08667 377 YTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
104-344 |
4.68e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 76.89 E-value: 4.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 104 LFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWL 183
Cdd:MTH00062 82 IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 184 QElpNSWSNYLLWtaciMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLM 263
Cdd:MTH00062 162 SV--SLIVYYVLS----FMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 264 MCLWGMIMTSLICLrqtDLKSLIAYSSVSHMaLVIMAILIQTPWSLMGATTLM-IAHGLTSSVLFCLANSNYERIHSRTM 342
Cdd:MTH00062 236 LFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSGSRNW 311
|
..
gi 1197511592 343 LL 344
Cdd:MTH00062 312 VL 313
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-327 |
1.68e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.31 E-value: 1.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 95 FLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTL 174
Cdd:PRK12665 113 FLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 175 SLFMMTYWLQELPnSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPlT 254
Cdd:PRK12665 192 NMADLAVRLDELP-SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-G 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1197511592 255 KFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:PRK12665 270 GGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
203-327 |
4.65e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.94 E-value: 4.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 203 FMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMCLwGMIMTSLIC---LRQ 279
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQ 294
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1197511592 280 TDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-339 |
8.70e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 69.98 E-value: 8.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 51 NFSLTFFSDPLSSpLLILTTWLfpLTIMASQHhltkeSWERKK--HFLSTLISLQLFLIMTFAATELIMFYTLFESTLIP 128
Cdd:PRK07234 58 NFGVTLRADALSG-YFILTNAL--VTLAVIFY-----CWESAKtrFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 129 TLIIITrWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLfmmtywlQELPNSWSNYLlwTACIMAFMVKMP 208
Cdd:PRK07234 130 TFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAF-------SGLATADPEAF--ALIALGLLVKGG 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 209 LYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMCLWGmimtSLICLRQTDLKSLIAY 288
Cdd:PRK07234 200 IFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAF 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1197511592 289 SSVSHMALVIMAILIqtpwslmgATTLMIAHGLTSSVLFCLANSNYERIHS 339
Cdd:PRK07234 276 STISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFT 318
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
1.11e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 70.03 E-value: 1.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 110 FAATELIMFYTLFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLaGSLPLLVALSHIQNSMGTLSLFMMtywLQELPNS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADI---SQGLIND 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 190 WSNYLLWTAC--IMAFMV-KMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMIL------NPLTKFMAYP 260
Cdd:PRK08668 190 TSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLpgtklfSEFGTYRGVP 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197511592 261 ---FLMMCLWGM--IMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:PRK08668 270 lfnYILAWLGNIsiIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
97-420 |
1.78e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 68.85 E-value: 1.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 97 STLISLQLFL-IMTFAATELIMFYtlfestliptliiitrwgNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLS 175
Cdd:PRK06525 133 STLLGLLLFFeITGLCSWALISYY------------------QSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 176 LFMMtywlQELPNSwSNYLLWTACIMAFMVKMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMVRIIMILNPLT 254
Cdd:PRK06525 195 LSAL----SGLHGS-LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIP 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 255 KFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIqtpwSLMGATTLMIA-------HGLTSSVLF 327
Cdd:PRK06525 269 HVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSL----AILGSRLALEGsiayifnHAFAKSLFF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 328 CLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITA--- 404
Cdd:PRK06525 345 LVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIesv 424
|
330
....*....|....*....
gi 1197511592 405 ---TYSLYMLTTTQRGKPS 420
Cdd:PRK06525 425 asfAWFLRWFGRVVFGEPS 443
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-327 |
2.29e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 68.64 E-value: 2.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 104 LFLIMTFAATELIMFYTLFESTLIPTLIIITRWG----NQT-ERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFM 178
Cdd:PRK08377 113 LFLLLMLGATGMIATGDIFNLFVFMEITAITAYAltayNKTgEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 179 MTYWLQELpNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMA 258
Cdd:PRK08377 193 IAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSS 271
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1197511592 259 YPFLM--MCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:PRK08377 272 VLKLViiMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLF 342
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
27-327 |
1.57e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 65.91 E-value: 1.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 27 ITLHSLTISLVSLFLFkQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESWERKKHFLSTLISLqLFL 106
Cdd:COG1007 38 LALLGLLLALALLLLA-LGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFAT-LGM 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 107 IMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLpLLVALSHIQNSMGTLSLFMMTYWLQE 185
Cdd:COG1007 116 MLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAGIAAALAA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 186 LPNSwsNYLLWTACIM---AFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILlKLGGYGM-VRIIMI-LNPLTKFMAYP 260
Cdd:COG1007 195 GGAN--SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLL 271
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511592 261 FLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-411 |
5.52e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.45 E-value: 5.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 16 WYSANPMVWINITLHSLTISLVSLFLFKQAD------TNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESW 89
Cdd:PRK06589 33 DSFIRNFLLITISIFFFGNILLIDLLFLKGIraqfelMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 90 ERKKHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLIIITrWGNQTERLNAGLYFL-FYTLAGSLPLLVALSHIQ 168
Cdd:PRK06589 113 DSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLkILMISALLLFLPAVILIY 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 169 NSMGTLSLFMMTYWlqelpnSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIM 248
Cdd:PRK06589 192 TKTGNLDFVSGGLF------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 249 I---LNPLTKF--MAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTS 323
Cdd:PRK06589 266 YifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAK 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 324 SVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMAAFSWSN--TTIILTGLNML 401
Cdd:PRK06589 346 ICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwLSIIVMLVVIA 425
|
410
....*....|
gi 1197511592 402 ITATYSLYML 411
Cdd:PRK06589 426 SSILSALYLL 435
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-332 |
4.51e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 61.67 E-value: 4.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 172 GTLSLFMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIM-IL 250
Cdd:PRK12662 188 GTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVF 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 251 NPLTKFMAYPF----LMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVL 326
Cdd:PRK12662 268 KANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSAL 347
|
....*.
gi 1197511592 327 FCLANS 332
Cdd:PRK12662 348 FMVSGS 353
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
105-330 |
5.32e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.98 E-value: 5.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 105 FLIMT-FAATEL--------IMFYTLFESTLIPTLIIITRWGNQTErlNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLS 175
Cdd:PRK12650 113 YLLMTaFMAAMLllvladdvVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 176 LFMMTYwlqelPNSWSNYLLWTACI-----MAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMIL 250
Cdd:PRK12650 191 LSGILH-----SDVWAEKPGLTTVVavliaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 251 NPLTKFMAypFLMMClwGM---IMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:PRK12650 266 HDVAVWNW--LLIIV--GMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
...
gi 1197511592 328 CLA 330
Cdd:PRK12650 342 MLI 344
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-330 |
1.11e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 60.35 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 2 LKIIVP--TAMLLpvTWYSANPMVWINITLHSLTISLV-SLFLFKQADTN----------SNNFSLTFFSDPLSSPLLIL 68
Cdd:PRK07691 8 LPILIPviTAILL--IFLGKRPIIQRYVALIGSLLTLVaAIILVANVYKHgiqtlelgnwKAPFGIVFVADMFAALLVLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 69 TTWLFPLTIMASQHHLTKEsweRKKHFLSTLIslqLFLIM----TFAATELIMFYTLFESTLIPTLIIITRWGNQTErLN 144
Cdd:PRK07691 86 SSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 145 AGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTAC--IMAFMVKMPLYGLHMWLPKAHVE 222
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFATKAGLFPLYFWLPGSYYA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 223 APIAGSMILAAILLKLGGYGMVRII-MILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAI 301
Cdd:PRK07691 239 PPIAIAALFGALLTKVGVYAIARTFtLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGV 318
|
330 340
....*....|....*....|....*....
gi 1197511592 302 LIQTPWSLMGATTLMIAHGLTSSVLFCLA 330
Cdd:PRK07691 319 AMMTESGMIGAIYYLIHDMIVKAALFLLI 347
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-354 |
1.96e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 59.93 E-value: 1.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 115 LIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMtYWLQELPNSWSNYL 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL-LASGDVIREHPLYL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 195 LWTACIM--AFmVKMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMVRiimiLNPLTKFMAYPFLMMCLWG--- 268
Cdd:PRK12647 196 AILLLVLggAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGglt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 269 MIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGL 348
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGL 349
|
....*.
gi 1197511592 349 QALLPL 354
Cdd:PRK12647 350 RRAMPI 355
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-312 |
4.94e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.42 E-value: 4.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 52 FSLTFFSDPLSSpLLILTTWLFPLTIMASQHHLTKESWERKkHFLSTLISLQLFLIMTFAATELIMFYTLFESTLIPTLI 131
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMAYGFGDIEHSGRRY-GFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 132 IITrWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFMVKMPLYg 211
Cdd:PRK12663 147 LIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALF- 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 212 LHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIIMILNPLTKFMAYPFL--MMCLwGMIMTSLICLRQTDLKSLIAYS 289
Cdd:PRK12663 225 PFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGYQ 303
|
250 260
....*....|....*....|...
gi 1197511592 290 SVSHMALVIMAILIQTPWSLMGA 312
Cdd:PRK12663 304 VISSIGFILLGLALGTPAGINGA 326
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-342 |
1.57e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 56.82 E-value: 1.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 145 AGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYwlQELPNSWSNYLLWTAcIMAFMVKMPLYGLHMWLPKAHVEAP 224
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRA--AHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 225 IAGSMILAAILLKLGGYGMVRIIM-ILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMA--- 300
Cdd:PRK06521 242 SHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlgl 321
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1197511592 301 --ILIQTPWSLMGATTLMIA------HGLTSSVLFCLANSNYERIHSRTM 342
Cdd:PRK06521 322 amVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDM 371
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-342 |
7.83e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 54.72 E-value: 7.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 59 DPLSSPLLILTTWLFPLTIMASQHHLTKESWERKKHFLSTLISLQLFLIMTfaATELIMFYTLFESTLIPTLIIITRWGN 138
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAFRND 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 139 QTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLwTACIMAFMVKMPLYGLHMWLPK 218
Cdd:PRK08376 167 TWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIAL-ALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 219 AHVEAPIAGSMILAAIllKLGG-YGMVRIIM-ILNPLTKFMAYPFLMMCL--WGMIMTSLICLRQTDLKSLIAYSSVS-- 292
Cdd:PRK08376 246 AYPAAPSSISAMLLVI--KQAGlYALARVLFsIYGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSqi 323
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 293 -HMAL---VIMAILIQTPWSLMGATTL------MIAHGLTSSVLFCLANSNYERIHSRTM 342
Cdd:PRK08376 324 gYMLLglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNL 383
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
153-327 |
3.42e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.46 E-value: 3.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 153 TLAGSLPLLVALSHIQNSMGTLSLfmmTYWLQELPNSWSNYLLWTACIMAF---MVKMPLYGLHMWLPKAhVEAPIAGSM 229
Cdd:COG1009 171 TRVGDLGLLLGILLLGAIAGTLNF---SELLAAAPTILSSPLLTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 230 IL-AAILLKLGGYGMVRiimiLNPLtkFMAYPFLMMCL-----WGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILI 303
Cdd:COG1009 247 LLhAATMVKAGVYLLAR----LSPL--FALSPVWLTVVaiigaITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
170 180
....*....|....*....|....
gi 1197511592 304 QtpwSLMGATTLMIAHGLTSSVLF 327
Cdd:COG1009 321 G---AYVAALFHLLTHAFFKALLF 341
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
17-323 |
5.76e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 51.75 E-value: 5.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 17 YSANPMVWINITLHSLTISLVSLFLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTIMASQHHLTKESWErkKHFL 96
Cdd:PRK05777 30 FVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLEDRGRG--EFYL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 97 STLISLQLFLIMTfAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLpLLVALSHIQNSMGTLS 175
Cdd:PRK05777 108 LVLFALLGMMVMV-SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIkYFVLGALASGF-LLYGMSLLYGATGSLS 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 176 LFMMTYWLQElpNSWSNYLLWTACIM---AFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILlKLGGYGM-VRI-IMIL 250
Cdd:PRK05777 186 FAGIAKALAD--GSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVVAF 262
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1197511592 251 NPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTS 323
Cdd:PRK05777 263 GGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-327 |
7.58e-07 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 51.43 E-value: 7.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 136 WGNQTER-LNAGL-YFLFYTLAGSLPLLVALSHIQnSMGTLSlFMMTYWLQELPNswsnyllWTACImAFMVKMPLYGLH 213
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVLLLAGILLHYA-ETGSFA-FGAIAGLGGTAA-------WLILI-GFGVNAAFPPLH 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 214 MWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIImilnPLTKFMAYPFLMMCLWGMIMTSLiclrQTDLKSLIAYSSVSH 293
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF----PGTELLIYIGAAMAVYGVFFALL----ENDLRRLLSYHIVSQ 275
|
170 180 190
....*....|....*....|....*....|....
gi 1197511592 294 MALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:PRK12668 276 VGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
156-398 |
7.90e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 51.37 E-value: 7.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 156 GSLPLLVALSHIQNSMGTLSLFMMTYWLQELPnswSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAIL 235
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 236 LKLGGYGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSVSHMALVIM-------AILIQTP-- 306
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLglgagvtGIALEQPal 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 307 --WSLMGATTLMIAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMSTWWLLASLNNLALPPSINLIGELLVTMA 384
Cdd:PRK08042 303 iaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
250
....*....|....
gi 1197511592 385 AFSWSNTTIILTGL 398
Cdd:PRK08042 383 FFKLSNSGAFVARL 396
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
116-357 |
8.62e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 51.29 E-value: 8.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 116 IMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMmtywLQELPNSWSNYLL 195
Cdd:PRK12646 133 ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITE----ILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 196 WTACIMAFMV----KMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMVRIIMILNpLTKFMAYPFLMMCLWGMI 270
Cdd:PRK12646 209 FIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITML 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 271 MTSLICLRQTDLKSLIAYSSVSHMALVIMAI-----LIQTP---------WSLMGATTLMIAHGLTSSVLFCLANSNYER 336
Cdd:PRK12646 287 FGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQqdaiasiyvFVLFAALFHLMNHAIFKCALFMGVGIIDHE 366
|
250 260
....*....|....*....|.
gi 1197511592 337 IHSRTMLLARGLQALLPLMST 357
Cdd:PRK12646 367 AGTRDIRILSGMRQLFPKMNL 387
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
8.85e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.00 E-value: 8.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 137 GNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSwSNYLLWTACIM---AFMVKMPLYGLH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-DRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 214 MWLPKAHVEA--PIAGsmiLAAILLKLGGYGMVRIIMILNPLTKFMAYPFLMMCLWGMIMTSLIC-----LRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigvLAAQRLRRLA 307
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1197511592 287 AYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLFCLA 330
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
112-327 |
1.48e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 50.69 E-value: 1.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 112 ATELIMFYTLFESTLIPTLIIItrwGNQTERLN---AGLYFLFYTLAGSLPLLVALSHIQNSMGTlslfmmtYWLQELPN 188
Cdd:PRK12644 125 SDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGT-------YRLSELLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 189 SWSNYLLWTACIMAFMV----KMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMVR-------------IIMIL 250
Cdd:PRK12644 195 DPPTGPAVSVAVVLILVgalsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARlapgfadvpvwrpTVLVL 273
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511592 251 NPLTkfmaypflmmclwgMIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:PRK12644 274 GLAT--------------MLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
1.92e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.56 E-value: 1.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 112 ATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLpLLVALSHIQNSMGTLSLFMMTYWLQELPNSW 190
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGL-FLFGCALLCGTTGGLHLSYINLVLNSGQSFS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 191 SNYLLWTAC--IMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAaILLKLGgygMVRIIMILNPLTKFmaypFLMMCLWG 268
Cdd:MTH00196 91 SVSVPIGYLliIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG---IFSILVSIGLNVNI----LLIGGLFS 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1197511592 269 MIMTSLICLRQTDLKSLIAYSSVSHMALVIMAILIQTPWSLMGATTLMIAHGLTSSVLF 327
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-295 |
1.00e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 41.74 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 53 SLTFFSDPLSSPLLILTTWLFPLTIMASQHHL-TKESWERKKHFLstLISLQLFLIMTFAATELIMFyTLFESTLIPTLI 131
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMsHKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFM 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 132 IITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTYWLQELPNSWSNYLLWTACIMAFM---VKMP 208
Cdd:PRK12649 150 LIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 209 LYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMVRIIMILNPLTKFmaypFLMMCLWGMI---MTSLICLRQTDLKS 284
Cdd:PRK12649 230 QGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIKA 304
|
250
....*....|.
gi 1197511592 285 LIAYSSVSHMA 295
Cdd:PRK12649 305 ILAYSTISQLA 315
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
23-307 |
2.91e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 39.95 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 23 VWINITLHSLTISLvSLFLFkqadTNSNNFSLTFFSDPLSspLLILTTWLF-PLTIMASQHHLTKESwERKKHFLSTLIS 101
Cdd:MTH00208 75 IWILLGCPNINISL-SNWLS----NTLFNFSLSFIFDFYF--ILFFSVALFvTWSIIEFSHYYMSND-PNKNAFFRLLII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 102 LQLFLIMTFAATELIMFYTLFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALSHIQNSMGTLSLFMMTY 181
Cdd:MTH00208 147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILS 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 182 wLQELPNSWSNYLLWTAcIMAFMVKMPLYGLHMWLPKAhVEAPIAGS-------MILAAILLklggygMVRIIMILNPLT 254
Cdd:MTH00208 227 -LNNSNSFLINILLFGI-LLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSP 297
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1197511592 255 KFmaypfLMMCLWGMIMTSL----ICLRQTDLKSLIAYSSVSHMALVIMAILIQTPW 307
Cdd:MTH00208 298 WF-----LSLCLILGSLTALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN 349
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
211-304 |
4.45e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.56 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 211 GLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMVRIImilnPLTKFMAYPFLMMCLWGMI---MTSLICLRQTDLKSLIA 287
Cdd:MTH00032 243 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQNDLKKVIA 318
|
90
....*....|....*..
gi 1197511592 288 YSSVSHMALVIMAILIQ 304
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIE 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
200-303 |
8.71e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 38.33 E-value: 8.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197511592 200 IMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILlKLGGYGMVRIIMILNpltkFMAYPFLMMCLWGMIMTSLICLRQ 279
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLY----WLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100
....*....|....*....|....
gi 1197511592 280 TDLKSLIAYSSVSHMALVIMAILI 303
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILH 189
|
|
| |
